Recruitment of flatfish species to an estuarine nursery habitat (Lima estuary,NW Iberian Peninsula)

One of the present concerns of fish biologists involves defining and identifying nursery habitats in the context of conservation and resource management strategies. Fish nursery studies usually report upon nursery occupation during the latter juvenile stages, despite the fact that recruitment to nurseries can start early in life, during the larval phase. Here we investigated the use of a temperate estuarine nursery area, the Lima estuary (NW Portugal), by initial development stages of flatfish species before and after metamorphosis, integrating the larval and juvenile phases. The Lima estuarine flatfish community comprised twelve taxa, seven of which were present as pelagic larvae, six as juveniles and three as adults. There was a general trend of increasing spring–summer abundance of both larvae and juveniles, followed by a sharp winter decrease, mainly of larval flatfishes. The Lima estuary was used by Solea senegalensis, Platichthys flesus and Solea solea as a nursery area, with direct settlement for the two first species. In contrast, indirect settlement was suggested for S. solea, with metamorphosis occurring outside the estuarine area. Estuarine recruitment of S. senegalensis varied between years, with young larvae occurring in the estuary throughout a prolonged period that lasted 6–9 months, corroborating the protracted spawning season. P. flesus, the second most abundant species, exhibited a typical spring estuarine recruitment, without inter-annual variations. Developed larvae arrived in the estuary during spring, whereas the 0-group juveniles emerged in the following summer period. The present study contributes new insight to our understanding of the economically important S. senegalensis, and highlights the importance of integrating the planktonic larval phase into traditional flatfish nursery studies.     

Larval fish distribution in shallow coastal waters off North Western Iberia (NE Atlantic)

Monthly sampling for ichthyoplankton was conducted at three stations very near to the coast (near to shore shallow stations before the surf zone in direction to the shoreline) of Atlantic northwestern Portugal within contrasting localities: rocky shore, in front of a sandy beach receiving an estuary and a fishing port with heavy anthropogenic impact. Sampling was conducted from August 2002 to October 2003, always at full moon, at low tide and high tide in daylight hours, at the water column using a 48 cm diameter plankton net with 335 μm mesh. Analysis of the physico-chemical parameters pointed out the spatial (horizontal) homogeneity of the sampling area. Fish larvae from 41 taxa belonging to 17 families were identified; Blenniidae, Labridae, Ammodytidae, Clupeidae, Gobiidae, Soleidae and Gobiesocidae were the most representative during the study period. Parablennius gattorugine, Ammodytes tobianus, Symphodus melops, Sardina pilchardus, Lipophrys pholis and Coryphoblennius galerita were the most representative species (percentage contribution to total abundance). Peak abundance of fish eggs occurred during May, June and August 2003 and fish larvae occurred during May and July 2003 and August 2002 and 2003; there was a pronounced winter/early spring (March 2003) peak in larval abundance dominated by the small sandeel A. tobianus. This study identifies the occurrence of a conspicuous assemblage of larval fishes at very nearshore shallow environments of a variety of species with different adult habitats: the fish larvae assemblage was dominated by intertidal species. The present study has shown that temporal and spatial variations in the larval fish assemblage are related to environmental conditions and biological dynamics: the results suggest that abiotic conditions mediate biotic parameters, and that both abiotic and biotic characteristics regulated the larval fishes at very nearshore shallow environments.     

Fish settlement in the ocean vs. estuary: Comparison of pelagic larval and settled juvenile composition and abundance from southern New Jersey,U.S.A.

To describe the larval and juvenile fish fauna and to evaluate the relative contribution of the ocean and the estuary as settlement areas for benthic species, we compared the composition and abundance of larval fish supply to that of recently settled juvenile fishes in both ocean and an adjacent estuary habitats in southern New Jersey. The study was conducted from May to November 1992 in the Great Bay–Little Egg Harbor estuary (<1–8 m sampling depth) and on the adjacent inner continental shelf in the vicinity of Beach Haven Ridge (8–16 m). During the study more larvae nearing settlement (postflexion) were captured in the estuary than in the ocean. Settlement occurred earlier in the estuary than in the ocean perhaps under the influence of earlier, seasonal warming of estuarine waters. There appeared to be two spatial patterns of settlement in the study area based on the dominant species (n = 17) represented by a sufficient number of individuals (n ≥ 25 individuals). There were species that primarily settle in the estuary, as represented by both estuarine residents (n = 3) and transients (n = 4), and those that settle in both the estuary and the ocean (n = 10). However, there were no species whose larvae were present in the estuary yet settle in the ocean. The fact that many of the species settle in both the estuary and the ocean indicates an overlap between these habitats because, at least for some species, these habitats may function in the same way. Further resolution of fish settlement patterns, and its influence on recruitment will need to rely on synoptic comparisons between estuaries and the ocean over multiple years.     

PCBs in the fish assemblage of a southern European estuary

The Mondego estuary fish assemblage was studied for the accumulation of PCBs. Three sampling stations were visited along an estuarine salinity gradient, and, in total, 15 species were collected. Analysis of PCBs revealed no significant differences among the sampling stations, although differences were observed among the fish assemblages. Fish assemblages could be divided into three groups. The first group comprised those with higher concentration (more than 10 ng g^− 1, dw), included the species Gobius niger, Sardina pilchardus, Anguilla anguilla, Pomatoschistus microps, Chelidonichthys lucerna and Liza ramada; the second group with medium concentration (5–10 ng g^− 1, dw), included the species Pomatoschistus minutus, Dicentrarchus labrax, Atherina presbyter, Chelon labrosus, Diplodus vulgaris, Platichthys flesus and Cilata mustela; and a third group with low concentration (less than 5 ng g^− 1, dw), included the species Solea solea and Callionymus lyra. A positive correlation was found between lipid content and PCB concentrations. To evaluate the influence of the residence time of species on the accumulation of PCBs, species were divided into two groups: species that spend more than 3 years in the estuary, and species that spend less than 3 years in the estuary. Species that spend more than 3 years in the estuary presented higher concentrations than species that spend less than 3 years in the estuary. CBs 138 and 153 had higher concentration, and tended to increase with time spent in the estuary.     

Population ecology and habitat preferences of juvenile flounder Platichthys flesus (Actinopterygii: Pleuronectidae) in a temperate estuary

The European flounder Platichthys flesus is a widely distributed epibenthic species and an important component of demersal fish assemblages in the European Atlantic coastal waters. In Portuguese estuaries, this species reaches high densities, especially in Minho estuary (NW Iberian Peninsula, Europe), potentially playing an important role in the system's ecology. In this context, the population structure, production and the habitat use of juvenile P. flesus were investigated. Sampling took place monthly, from February 2009 until July 2010 along the entire estuarine gradient (5 sampling stations distributed in the first 29 km from the river mouth, with S1 located near the river mouth, S2 inside a salt marsh, S3 in a salinity transition zone, while S4 and S5 were located in the upper estuary). Flounder's density varied significantly among sampling stations and seasons (two-way PERMANOVA: p < 0.001), with the majority of the individuals being found during the spring (30.1%) and in S3 and S4 (72.6%). Males and females presented an even distribution, with a higher proportion of males observed during summer. Fish length also differed among sampling stations and seasons (two-way PERMANOVA: p < 0.001), with larger fishes being found in S1 during the autumn (168.50 ± 59.50 mm) and the smallest in S4 during the spring (33.80 ± 3.12 mm). Size classes associated differently with environmental variables, with larger juveniles being more abundant in the downstream areas of the estuary, whereas smaller juveniles were related to higher water temperatures, suggesting a habitat segregation of P. flesus of different sizes. The fish condition of P. flesus in Minho estuary was higher than in other systems, probably due to the dominance of juveniles on the population. Also, the densities found in this estuary were up to 32 times higher than in other locations, suggesting that Minho estuary is an important nursery area for the species. The estimated secondary production of P. flesus was lower than previous studies acknowledged in the system (0.037 g.WWm^− 2.year^− 1), indicating that the production estimates of this species in estuaries can vary considerably depending on of several factors such as the sampling year and strategy, population and fish size.     

Spatial distribution and vertical migrations of fish larvae communities off Northwestern Iberia sampled with LHPR and Bongo nets

The spatial distribution and diel vertical migration of fish larvae were studied in relation to the environmental conditions off NW Iberia during May 2002. Larvae from 23 families were identified, the most abundant were the Clupeidae, Gobiidae, Callionymidae, Blenniidae, Sparidae and Labridae. Sardina pilchardus was the most abundant species, mean concentrations 1 order of magnitude higher than the other fish larvae species. Larval horizontal distribution was mainly related to upwelling-driven circulation, resulting in an offshore increase of larval abundance while the vertical distribution was closely associated to the Western Iberia Buoyant Plume. Despite this general trend, taxon-specific relationships between the distribution of larvae and environmental variables were observed, and temperature was an important regressor explaining the distribution of most taxa. A comparison between ichthyoplankton samples collected alternatively with the LHPR and Bongo nets resulted in captures of larvae ≈1 order of magnitude higher for the LHPR, probably related to its higher towing speed. The spatial distribution and relative composition of larvae were also different for both nets, although the most frequent/abundant groups were the same. A fixed station sampled for 69-h showed diel vertical migrations performed by the larvae, with the highest larval concentrations occurring at surface layers during the night and most larvae being found in the neuston layer only during that period.     

Depth zonation and bathymetric trends of deep-sea megafaunal scavengers of the Hawaiian Islands

The deep sea has been shown to exhibit strong depth zonation in species composition and abundance. Examination of these patterns can offer ecological insight into how organisms adapt and respond to changing environmental parameters that co-occur with depth. Here we provide the first tropical study on bathymetric zonation and other depth-related trends (size, abundance, and species richness) spanning shelf to abyssal depths of scavenging megafauna. Baited time-lapse free-vehicle cameras were used to examine the deep-sea benthic and demersal scavenging communities of the Hawaiian Islands, an area for which the biology and ecology have remained poorly studied below 2000 m. Twenty-two deployments ranging in depth from 250 to 4783 m yielded 37 taxa attracted to bait, including the first known occurrence of the family Zoarcidae in the Hawaiian Islands. Cluster analysis of Bray–Curtis similarity of species peak abundance (n_max) revealed four main faunal zones (250–500, 1000, 1500–3000, and ?4000 m) with significant separation (ANOSIM, global R=0.907, p=0.001) between designated depth groups. A major faunal break was identified at the 500–1000 m transition where species turnover was greatest, coinciding with the location of the local oxygen minimum zone. Dominance in species assemblage shifted from decapod crustaceans to teleosts moving from shallow to deeper faunal zones. Significant size differences in total length with depth were found for two of the four fish species examined. A logarithmic decline was observed in scavenger relative abundance with depth. Evidence of interaction between scavenging species was also noted between Synaphobranchus affinis and Neolithodes sp. (competition) and Histiobranchus sp. and aristeid shrimp (predation), suggesting that interactions between scavengers could influence indices of abundance generated from baited camera data.     

Influence of summer conditions on the larval fish assemblage in the eastern coast of Tunisia (Ionian Sea,Southern Mediterranean)

The structure of the summer larval fish assemblage off the eastern coast of Tunisia and its relation to environmental conditions was studied, from ichthyoplankton samples taken during a survey conducted between 23rd June and 9th July 2008. A total of 68 larval fish taxa were identified, 52 to species level. The taxonomic composition and abundance of the larval fish assemblage showed high spatial heterogeneity. Mesoscale hydrographic features, such as eddies, seem to play an important role in the spatial distribution of fish larvae in the area, enhancing concentration and retention. The larval fish assemblage was dominated by the small pelagic species Sardinella aurita (26.6% of the total larval fish abundance), followed by Engraulis encrasicolus (22.6%), Spicara spp. (8.6%) and Mullus barbatus (6.8%). Shannon–Weaver index (H′) ranged between 0 and 2.62. The highest values were found offshore, at 95 miles east of Sousse, over depths around 250 m. The diversity was higher in this region as a result of transport by currents and retention by eddies. It has also been shown that the eastern coast of Tunisia is a spawning ground for the tuna species Auxis rochei, Thunnus thynnus and Thunnus alalunga. Larvae of mesopelagic fishes represented 5.46% of the total abundance, with Cyclothone braueri, Ceratoscopelus maderensis and Lampanyctus crocodilus being the most important species. Canonical correspondence analysis (CCA) indicated that depth was the most important environmental factor in explaining species distribution.     

Recruitment of flatfish species to an estuarine nursery habitat (Lima estuary, NW Iberian Peninsula)

One of the present concerns of fish biologists involves defining and identifying nursery habitats in the context of conservation and resource management strategies. Fish nursery studies usually report upon nursery occupation during the latter juvenile stages, despite the fact that recruitment to nurseries can start early in life, during the larval phase. Here we investigated the use of a temperate estuarine nursery area, the Lima estuary (NW Portugal), by initial development stages of flatfish species before and after metamorphosis, integrating the larval and juvenile phases. The Lima estuarine flatfish community comprised twelve taxa, seven of which were present as pelagic larvae, six as juveniles and three as adults. There was a general trend of increasing spring–summer abundance of both larvae and juveniles, followed by a sharp winter decrease, mainly of larval flatfishes. The Lima estuary was used by Solea senegalensis, Platichthys flesus and Solea solea as a nursery area, with direct settlement for the two first species. In contrast, indirect settlement was suggested for S. solea, with metamorphosis occurring outside the estuarine area. Estuarine recruitment of S. senegalensis varied between years, with young larvae occurring in the estuary throughout a prolonged period that lasted 6–9 months, corroborating the protracted spawning season. P. flesus, the second most abundant species, exhibited a typical spring estuarine recruitment, without inter-annual variations. Developed larvae arrived in the estuary during spring, whereas the 0-group juveniles emerged in the following summer period. The present study contributes new insight to our understanding of the economically important S. senegalensis, and highlights the importance of integrating the planktonic larval phase into traditional flatfish nursery studies.     

Influence of sex and age on PCBs accumulation in the commercial fish Chelon labrosus

Thicklip grey mullet, Chelon labrosus, is an important commercial fish species and has been studied worldwide. However, no recent studies have been made regarding polychlorinated biphenyls (PCBs) in wild C. labrosus. Due to that, the concentration of 13 PCBs congeners was measured in muscles and livers, of males and females, of C. labrosus of different ages, allowing the estimation of PCB bioaccumulation throughout the species lifespan, in the Mondego estuary, a southern European temperate estuary. Male muscle sample concentrations ranged from 32 to 96 ng g^− 1 (lipid wt.) and in females from 32 to 62 ng g^− 1 (lipid wt.). In male liver sample concentrations ranged from 106 to 158 ng g^− 1 (lipid wt.), while female concentrations ranged from 88 to 129 ng g^− 1 (lipid wt.). The most abundant congeners presenting higher percentages in all samples were CB 138, 153 and 180. No significant differences were found between the concentrations in both sexes, but muscle and liver PCB concentrations in males tended to increase with age whereas in females concentrations remained stable throughout the species lifespan. Significant differences were found between concentrations in muscle and liver.     

Physical factors influencing immature-fish communities in the surf zones of sandy beaches in northwestern Kyushu Island,Japan

We aim to understand the relationships between physical conditions and characteristics of the immature-fish community in surf zones of sandy beaches. Therefore, we obtained fish samples between March 2007 and February 2008 and analyzed certain physical conditions in the surf zones of 21 sandy beaches on the coastline of the northwestern Kyushu Island, Japan. We collected a total of 83 species and 6458 immature individuals. In a BIO-ENV analysis, the highest correlation was observed between fish assemblage and S20 (i.e., the slope from the shoreline to the sites where the depth was 20 m) and current velocity (CV) values. Stepwise multiple linear regression analyses revealed that the number of species and individuals decrease with an increase in the S20 and CV values. These results show that species richness and the abundance of immature-fish increase under shelving and calm conditions. Thus, immature-fish assemblages are strongly influenced by the prevailing physical conditions. Moreover, in six of the 10 dominant species, a negative correlation was observed between CV and abundance. On the other hand, S20 was found to be the explanatory variable only in the case of the most dominant species, i.e., Gymnogobius breunigii. Furthermore, a positive correlation was observed between S1 (i.e., the slope from the shoreline to the sites where the depth was 1.0 m at the mean tidal level) and median particle size (i.e., MPS of the sediments) and the abundances of Sillago japonica and Favonigobius gymnauchen, respectively, and a negative correlation with salinity, in the case of Acanthogobius lactipes. We conclude that the characteristics of the fish community in surf zones on sandy beaches are determined by not only the shelving and calm conditions, which influence fish assemblages and abundances, but also the habitat diversity, which influences the diversity of fish species.     

Stock and losses of trace metals from salt marsh plants

Pools of Zn, Cu, Cd and Co in the leaf, stem and root tissues of Sarcocornia fruticosa, Sarcocornia perennis, Halimione portulacoides and Spartina maritima were analysed for a Tagus estuary (Portugal) salt marsh. Pools of Cu and Cd in the salt marsh were higher in spring/summer, indicating a net uptake of these metals during the growing season. Standing stocks of Zn, Cu, Cd and Co in the leaf and stem biomass of S. fruticosa, S. perennis and H. portulacoides showed a strong seasonal variation, with higher values recorded in autumn. The metal-containing leaves and stems that shed in the autumn become metal-containing detritus. The amount of this material washed out from the total marsh area (200 ha) was estimated as 68 kg of Zn, 8.2 kg of Cu, 13 kg of Co and 0.35 kg of Cd. The high tidal amplitude, a branched system of channels and semi-diurnal tidal cycle greatly favour the export of the organic detritus to adjoining marsh areas.     

Inter-cohort differences in spatial and temporal settlement patterns of young-of-the-year windowpane (Scophthalmus aquosus) in southern New Jersey

The timing and location of settlement of two cohorts (spring and fall) of windowpane (Scophthalmus aquosus) were identified based on collections from 64 sampling locations along a corridor from the lower estuary, through the inlet, and on to the adjacent inner continental shelf in southern New Jersey. Spatio-temporal patterns of settlement during 1989–1998 were determined based on capture location and timing, and eye migration stage. Spring-spawned windowpanes were collected in estuarine, inlet and ocean habitats as larvae, during settlement, and after settlement. Densities of spring-spawned larvae (∼2–10 mm standard length (SL)) peaked in May in all habitats (estuary, inlet, and ocean). Initial settlement of spring-spawned windowpane occurred during May in the inlet and ocean when fish had grown to ∼7–8 mm SL (mid-point of eye migration), but fish did not appear in demersal estuarine collections until June when they were larger and more developmentally advanced (∼24–32 mm SL; post-eye migration). A transitional settlement period, comprised of a progressive habitat shift from pelagic to demersal habitats, is proposed for the spring cohort to explain the observed patterns. Fall-spawned fish of all developmental stages and sizes were virtually absent from estuarine collections. Fall-spawned larval (∼2–10 mm SL) densities peaked in October in inlet and ocean habitats and fish began settling there during the same month at sizes similar to the spring cohort (∼7–8 mm SL). This research confirms that there are important cohort-specific and life-stage dependent differences in young-of-the-year (YOY) windowpane habitat use in southern New Jersey and perhaps in other east coast US estuaries. These differences may affect the overall contribution that each cohort makes to a given year class and thus, may have an important role in determining the recruitment dynamics of this species.     

Impact of climate variability on ichthyoplankton communities: An example of a small temperate estuary

Recent variations in the precipitation regime across southern Europe have led to changes in river fluxes and salinity gradients affecting biological communities in most rivers and estuaries. A sampling programme was developed in the Mondego estuary, Portugal, from January 2003 to December 2008 at five distinct sampling stations to evaluate spatial, seasonal and inter-annual distributions of fish larvae. Gobiidae was the most abundant family representing 80% of total catch and Pomatoschistus spp. was the most important taxon. The fish larval community presented a clear seasonality with higher abundances and diversities during spring and summer seasons. Multivariate analysis reinforced differences among seasons but not between years or sampling stations. The taxa Atherina presbyter, Solea solea, Syngnathus abaster, Crystallogobius linearis and Platichthys flesus were more abundant during spring/summer period while Ammodytes tobianus, Callionymus sp., Echiichthys vipera and Liza ramada were more abundant in autumn/winter. Temperature, chlorophyll a and river flow were the main variation drivers observed although extreme drought events (year 2005) seemed not to affect ichthyoplankton community structure. Main changes were related to a spatial displacement of salinity gradient along the estuarine system which produced changes in marine species distribution.     

Environmental control on early life stages of flatfishes in the Lima Estuary (NW Portugal)

Several flatfishes spawn in oceanic waters and pelagic larvae are transported inshore to settle in the nursery areas, usually estuaries, where they remain during their juvenile life. Nursery areas appear as extremely important habitats, not only for juveniles but also for the earlier planktonic larval fish. Yet, the majority of nursery studies tend to focus only on one development stage, missing an integrative approach of the entire early life that fishes spent within a nursery ground. Thus, the present study assessed the influence of environmental parameters on the dynamics of the larval and juvenile flatfishes, throughout their nursery life in the Lima Estuary. Between April 2002 and April 2004, fortnightly subsurface ichthyoplankton samples were collected and juveniles were collected from October 2003 until September 2005. Larval assemblages comprised nine flatfish species, while only six were observed among the juvenile assemblages. Solea senegalensis and Platichthys flesus were the most abundant species of both fractions of the Lima Estuary flatfishes. Larval flatfish assemblages varied seasonally, without relevant differences between lower and middle estuary. Platichthys flesus dominated the spring samples and summer and autumn periods were characterized by an increase of overall abundance and diversity of larval flatfishes, mainly S. senegalensis, associated with temperature increase and reduced river flow. On the contrary, during the winter abundance sharply decreased, as a consequence of higher river run-off that might compromised the immigration of incompetent marine larvae. Juvenile flatfishes were more abundant in the middle and upper areas of the estuary, but the species richness was higher near the river mouth. Sediment type, distance from the river mouth, salinity, temperature and dissolved oxygen were identified as the main environmental factors structuring the juvenile flatfish assemblages. Juveniles were spatially discrete, with the most abundant species S. senegalensis and P. flesus associated with the middle and upper estuary, while the remaining species were associated with the lower estuarine areas. The larval fraction exhibited distinct dynamics from the juvenile estuarine flatfish community. Larval flatfishes showed a strong seasonal structure mainly regulated by biological features as the spawning season and also by seasonal variations of water characteristics. On the other hand, juvenile flatfishes were markedly controlled by site specific characteristics such as sediments structure, distance from the river mouth and salinity regime. The present study emphasized the idea that the environmental control varies throughout the ontogenetic development, stressing the importance of integrating all the early life of a species in flatfish nursery studies.     

The seasonal succession of zooplankton in the Southern Ocean south of Australia,part II: The Sub-Antarctic to Polar Frontal Zones

Between October 2001 and March 2002 six transects were completed at monthly intervals in the Sub-Antarctic Zone (SAZ) and Inter-Sub-Antarctic Front Zone (ISAFZ)/Polar Frontal Zone (PFZ) in the Southern Ocean south of Australia. Zooplankton were collected with a Continuous Plankton Recorder and NORPAC net and multivariate analysis was used to analyse the seasonal succession of communities. Despite strong, seasonally consistent, biogeographic differences between the SAZ and ISAFZ/PFZ, community structure in all zones was dominated by a suite of common taxa. These included the ubiquitous Oithona similis, foraminiferans and appendicularians (Core taxa), occurring in >97% of samples and contributing an average of 75% to total sample abundance, and Calanus simillimus, Rhincalanus gigas, Ctenocalanus citer, Clausocalanus brevipes, Clausocalanus laticeps, Oithona frigida, Limacina spp. and chaetognaths (Summer taxa), present in >57% of samples and occurring at seasonally high densities. Because of the dominance of the Core and Summer taxa, the seasonal succession was most clearly evident as a change in zooplankton densities. In October densities averaged <15 ind m⁻³, rising to 52 ind m⁻³ (max=92 ind m⁻³) in November, and subsequently increasing slowly through to January (ave=115 ind m⁻³; max=255 ind m⁻³). Densities peaked abruptly in February (ave=634 ind m⁻³; max=1593 ind m⁻³), and remained relatively high in March (ave=193 ind m⁻³; max=789 ind m⁻³). A latitudinal lag in seasonal development was observed with peak densities occurring first in the SAZ (February) and then in the ISAFZ/PFZ (March). The seasonal community succession was strongly influenced by species population cycles. The role of zooplankton in biogeochemical cycling in the SAZ and ISAFZ/PFZ was discussed in the light of past sediment trap data collected from the study area.     

Temporal changes (1989–1999) in deep-sea metazoan meiofaunal assemblages on the Porcupine Abyssal Plain,NE Atlantic

Trends among major metazoan meiofaunal taxa were investigated based on 56 deployments of a multicorer at 10 time points over a period of 11 years (1989–1999) at the Porcupine Abyssal Plain Sustained Observatory site (PAP-SO: 48°50′N 16°30′W, 4850 m depth). This area is characterised by a strong seasonality in the deposition of organic matter to the seafloor and by the massive increase in the density of holothurian species since 1996, the so-called ‘Amperima event’. Total meiofaunal densities ranged from 346 to 1074 ind.×10 cm⁻² and showed a significant increase with time when time was represented by cruises, years and the ‘Amperima period’ (1996–1999) vs. the pre-Amperima period (1989–1994). This pattern was driven mainly by the nematodes, which were the dominant taxon (∼90% of total abundance). The third most abundant group, the polychaetes, also increased significantly in abundance over the time series, while the ostracods showed a significant decrease. Most other taxa, including the second-ranked group, the copepods (harpacticoids and nauplii), did not exhibit significant temporal changes in abundance. Ordination of taxon composition showed a shift from the pre-Amperima to the Amperima periods, a trend supported by the significant correlation between the x-ordinate and time. The majority (52–75%) of meiofaunal animals inhabited the top 2 cm of the 5 cm sediment cores analysed. There were significant increases in the proportion of total meiofauna, nematodes and copepods (but not polychaetes) inhabiting the 0–1 cm layer over time (represented by cruises) and between the pre-Amperima and Amperima periods in the case of copepods and polychaetes. During the intensively sampled period (1996–1997), there were indications of seasonal changes in the vertical distribution patterns of total meiofauna and nematodes within the sediment. We discuss the potential link between temporal variations in organic matter flux to the seafloor and meiofaunal populations, considering both qualitative and quantitative changes in fluxes and how they may be linked to climate variations.     

Diversity,distribution and ecology of benthic molluscan communities on the Portuguese continental shelf

The diversity, ecology and distribution patterns of the Portuguese continental shelf malacofauna and its relationship with abiotic factors were studied from samples covering the western and the southern coast. A total of 2544 specimens were identified corresponding to 169 taxa, mostly bivalves (62% of the total taxa). Abra alba was the most abundant and the most frequent species. The alpha diversity ranged from one species to 21 spp. 0.1 m^− 2. The highest abundance and diversity were obtained in coarser sediments. Multivariate analysis based on the abundance data identified five major malacological groups: (a) Angulus pygmaeus and Thracia villosiuscula in the coarser sediments of the western inner and mid shelf; (b) Calyptraea chinensis and Leptochiton cancellatus in the heterogeneous and organically enriched sediments of the southern shelf; (c) Angulus fabula, Spisula subtruncata and Pharus legumen in the near shore exposed fine sands; (d) A. alba in muddy fine sands, mainly in the northwestern shelf and (e) Saccella commutata in the southwestern deeper shelf. The malacofauna could be used as a proxy for the major benthic communities known to occur in this area, except in muddy patches, where molluscs were absent or low abundant. Median grain-size, gravel content, depth and hydrodynamic regime were the environmental factors best related to the malacofauna spatial distribution patterns. This study sets the first record of Astarte borealis, Leptochiton asellus, Mercenaria mercenaria and Montacuta phascolionis in the Portuguese shelf and the most northern limit for Anadara polii, Glycymeris nummaria, and Leptochiton algesirensis along the northwestern shelf. This study also gives new ecological insights for several species, in terms of bathymetric range distribution, as well as habitat type and highlighted the transitional characteristics of the molluscan communities from this particular northeastern Atlantic area where boreal, temperate and subtropical faunas can coexist.     

Vertically migrating micronekton and macrozooplankton communities around Guam and the Northern Mariana Islands

The distribution, biomass, and assemblages of vertically migrating micronekton/macrozooplankton were studied in relation to oceanographic conditions around Guam and the adjacent Northern Mariana Islands during Spring 2010, using 3-m² Isaacs-Kidd Midwater Trawl (IKMT). The study area was located within the oligotrophic waters of the westward flowing North Equatorial Current (NEC). However, southern stations of the survey were situated close to the northern boundary of the more productive North Equatorial Countercurrent (NECC), where we observed the highest biomass, abundance, species richness, and diversity of pelagic organisms. Overall, we recorded 85 species from 20 families of mostly mesopelagic species in the area, with lanternfishes (Myctophidae—40 species) and dragonfishes (Stomiidae—18 species) being the most taxonomically diverse groups. Three genera of mesopelagic shrimps, Sergestes, Janicella and Sergia, dominated the decapod crustacean component of the micronekton community numerically and by biomass, while the contribution from cephalopods was relatively minor. Assemblages of major micronekton/macrozooplankton groups, based on biomass and abundance showed principal changes with latitude. However, the classification and ordination analysis, based on taxonomically resolved taxa (fishes and decapod shrimps), indicated additional zonal variation, with areas east and west of the island chain showing different community structure. The mean total micronekton biomass for the area near the productive boundary region between the NEC and NECC was 5.8 mg/m³, with a mean biomass of 1.2 mg/m³ obtained for stations in the oligotrophic NEC area. The corresponding biomass of mesopelagic fishes was 0.88 mg/m³ and 0.24 mg/m³ for these two areas, respectively. We reviewed and compared the available information on the quantitative distribution of midwater fish biomass in the western tropical Pacific and outlined major patterns of variation in the equatorial Pacific in general.