Nutrient attenuation in a shallow,gravel-bed river. I. In-situ chamber experiments

ABSTRACT

Dissolved nutrient uptake and metabolism by periphyton in a central North Island gravel-bed river were investigated using recirculating in-situ chambers. Dissolved inorganic nitrogen (DIN) uptake was correlated with photosynthesis and chlorophyll but N uptake and carbon fixation were partly de-coupled indicating storage. Dissolved reactive phosphorus (DRP) uptake was only weakly correlated with photosynthesis. Diatoms and green algae relied on DRP in the water, but Cyanobacteria met part of their P needs from storage. Dissolved organic nutrients were excreted in both light and dark incubations, with approximately 50% of DIN uptake during photosynthesis excreted as DON. To simulate diurnal variations in nutrients, oxygen and pH existing computer models need to de-couple photosynthesis from nutrient uptake, allow for variable stoichiometry and better quantify recycling of organic nutrients.     

Dynamics of phosphorus exchange between sediment and water in a gravel-bed river

ABSTRACT

Phosphorus (P) stores in gravel-bed rivers are released for uptake by periphyton when pH levels exceed 8.5. The Tukituki River has low alkalinity water and frequently experiences periphyton blooms, and daytime pH?>?9 during summer low-flows. We measured dissolved reactive P (DRP) and EPC₀, the water concentration of DRP at which no net release or sorption from the river bed occurs, in sediment samples from the Tukituki River subject to controlled pH levels before (2014) and after (2017) changes to two wastewater discharges that reduced P release to the river by 95%. DRP released from 2014 sediments at pH 8.5–10 were 30?±?10?mg/m³ above background (pH 8) whereas those released from 2017 sediments were 5?±?3?mg/m³ above background. EPC₀ levels in 2014 and 2017 were 11?±?6 and 7?±?2?mg/m³, respectively. Field estimates of released DRP calculated from continuous pH and the Redfield equation suggested that most of the readily available DRP released from sediments at elevated pH is derived from material attached to recently deposited sediment. Subsequently, a reduction in wastewater inputs or agricultural runoff should reduce sediment DRP stores, and hence sediment fluxes, within a few years and mitigate periphyton blooms in addition to directly lowering water column concentrations.     

The vertical attenuation of light in Charlotte Harbor, a shallow, subtropical estuary, south-western Florida

The relative contribution of different components to the attenuation of photosynthetically active radiation was determined in the Charlotte Harbor estuarine system based on laboratory and in situ measurements. Agreement between laboratory and in situ measurements of the attenuation coefficient (k_t) was good (r² = 0·92). For all in situ measurements (n = 100), suspended, non-chlorophyll matter accounted for an average of 72% of k_t, dissolved matter accounted for 21%, suspended chlorophyll for 4%, and water for the remaining 3%.For individual determinations, suspended non-chlorophyll matter, dissolved matter, suspended chlorophyll, and water, each accounted for as much as 99%, 79%, 21%, and 18% of k_t. Attenuation by suspended matter was greatest near the mouth of the northern tidal rivers and was variable over the rest of the estuarine system. Attenuation by dissolved matter was greatest in the brackish tidal rivers and decreased with increasing salinity. Attenuation due to dissolved matter was positively correlated with water color. The source of the color was basin runoff. Wavelength transmittance changed along the salinity gradient. Maximum transmittance shifted from 500 to 600 nm in gulf waters to 650 to 700 nm in colored, brackish waters. Dissolved matter was primarily responsible for the large attenuation at short wavelengths (400–500 nm).     

Spatial changes in a macrozoobenthic community along environmental gradients in a shallow brackish lagoon facing Sendai Bay, Japan

The spatial distribution, abundance, and assemblage structure of macrozoobenthos were examined at 45 stations in a brackish lagoon (Idoura Lagoon, Japan) to examine the animal–environmental relations in estuarine soft-bottom habitats. We found a total of 23 taxa; the polychaetes Heteromastus sp., Hediste spp., and Prionospio japonica and the isopod Cyathura muromiensis numerically dominated the community. Cluster analysis and one-way analysis of similarity (ANOSIM) identified seven groups of stations that had significantly different macrozoobenthic communities; these were subsequently consolidated into five habitat groups according to their association with environmental characteristics. Canonical correspondence analysis (CCA) showed that salinity, silt-clay content, and the oxidation–reduction potential (ORP) of the sediment strongly affected the macrozoobenthos distribution pattern in the lagoon, whereas other factors (e.g., relative elevation of the habitat and sediment organic content) had much weaker effects. Similarity percentages (SIMPER) procedures indicated that the polychaete Notomastus sp. and the bivalve Macoma contabulata were specific to habitats with low salinity and reduced mud, whereas the bivalve Nuttallia olivacea was specific to sandy bottoms. Heteromastus sp. and Hediste spp. achieved their highest densities in rather oxidized sediments. The acid-volatile sulfide (AVS) content in the sediment was suggested as another possible factor affecting macrozoobenthic density. Our results clearly demonstrate that macrozoobenthic assemblages in estuarine soft-bottoms have high spatial heterogeneity on a small scale (e.g., hundreds of meters) related to physical and chemical environmental changes. Our data also suggested the importance of sediment redox condition (e.g., ORP and AVS content) and sediment grain size as structuring factors in estuarine soft-bottom communities as well as the salinity in the habitat.     

Nutrient Cycling and a Stoichiometric Model in Epidavros, a Deep Basin in the Aegean Sea

Abstract. The nutrient cycling of Epidavros, a deep basin in the Saronikos Gulf, was studied in relation to various environmental factors during 1973–1976 at a station characterized by stagnant conditions. The regeneration of nutrients was related to the consumption of oxygen, and a seasonal nutrient cycle occurred with low nutrient concentrations in the spring and summer, followed by high nutrient levels in autumn and winter. In addition high values of nitrate and silicate were observed in the deeper waters, which tended to be anoxic, although the water masses were renewed during spring 1974. The distribution pattern of nutrients together with nutrient ratios were compared with previous studies of the same and neighbouring areas as well as of other isolated basins. A stoichiometric model indicates that plankton organisms in the Epidavros basin have approximate atomic ratios for C: N: P of 150: 14:1, while the ratio of change for nitrogen and phosphorus in the water is only 8.8:1 by atoms. This is probably because of the slow rate of regeneration of nitrogenous material and/or assimilation and regeneration in organic forms. The water/plankton relation in the Epidavros basin appears to be very similar to that in the Baltic Sea.     

厦门海域秋、冬季溶解有机氮时空分布及总溶解态氮的组成

根据2015年10月(秋季)和2016年1月(冬季)对厦门海域开展的2次水质调查,研究了该海域中溶解有机氮(DON)的时空分布特征及总溶解态氮(TDN)的组成,并探讨了DON与环境要素的相关性及其来源.结果表明:厦门海域DON浓度平均值冬季大于秋季,表层高于底层,整体呈内湾、河口区较高,湾口区低的分布格局.秋季DON浓度的空间分布为同安湾西海域九龙江口邻近海域东南海域大嶝海域,冬季为西海域同安湾九龙江口邻近海域东南海域大嶝海域.该海域秋、冬季DON浓度占比(CDON/CTDN)分别为56%和53%,DON浓度占比整体呈湾口区大、河口区及内湾小的分布特征.相关性分析表明,该海域秋、冬季表、底层DON浓度与盐度均呈极显著负相关,与磷酸盐、硅酸盐含量为极显著正相关,与叶绿素a、溶解氧、p H值存在一定相关性.厦门海域DON的来源主要有九龙江河流、城市生活污水、工农业废水等陆源输入和浮游植物活动等海源生成.     

Nutrient, sulfur and carbon dynamics in a hypersaline lagoon

We measured benthic and water column fluxes in a hypersaline coastal system (Baffin Bay, Texas) in 1996–1997, a period of decreasing salinity (increased freshwater input) and turbidity. Salinity decreased from a mean of 60 to 32 practical salinity units (psu) and turbidity decreased from a mean of 78 to 25 NTU over the study period. Associated with hydrological changes, there were important changes in nutrient fluxes and metabolism. There was a shift of total respiration from the water column to the sediments and an increased amount of the benthic metabolism (2–67%) was attributed to sulfate reduction in this system when salinity was lowest, perhaps a consequence of increased benthic light levels and photosynthetic production of labile carbon in the sediments. The sediments were a large sink for both N and P. Sediment particulate C:N (9.8) and C:P (119) ratios were lower than those in the water column. However, ammonium:phosphate fluxes increased coincident with increased sulfate reduction rates and porewater sulfide concentrations. Efficient N-retention mediated through dissimilative nitrate reduction to ammonium, and high rates of N-fixation in shallow, hypersaline systems may facilitate transitions from N-limitation to P-limitation. During the most hypersaline period, seston exhibited some of the most extreme nutrient ratios ever reported for a marine ecosystem (C:N 10–37 and C:P 200–1200) and suggest that plankton are likely to be P-limited or are very well adapted to low P availability. When salinity and N:P and C:P ratios were highest, the plankton was dominated by a brown tide alga (Aureoumbra lagunensis), supporting evidence that this organism is adapted to low P, long residence time systems.     

Spatial and temporal variations in a community of nektobenthic invertebrates from Moreton Bay,Queensland

The temporal and spatial patterns in community composition, number of species and number of individuals were described and related to abiotic factors. During warmer months, nocturnal periods had more species and individuals than diurnal periods and a changed community composition. Burrowing in the sediment during daytime caused these changes and probably serves to reduce both predation and energy expenditure. Diel differences were reduced or absent in winter when the community was depauperate. Monthly patterns were highly positively correlated with temperature but not with salinity. These patterns were affected by summer migrations of juveniles from very shallow nursery areas. The deepest site varied least over time and was also the most individualistic in community composition. Numbers of species and individuals were both positively correlated with distance offshore and depth during most months. These factors probably reflect relative marine influence and environmental stability. The dynamic nature of the community is illustrated by the fact that interaction terms in factorial anovas were always significant and thus no spatial or temporal pattern was consistent.     

Spatial and temporal distribution of chromophoric dissolved organic matter (CDOM) fluorescence and its contribution to light attenuation in UK waterbodies

Vertical attenuation of light through the water column (K_d) is attributable to the optically active components of phytoplankton, suspended particulate material (SPM) and chromophoric dissolved organic matter (CDOM). Of these, CDOM is not routinely monitored and was the main focus of this study. Concentrations and spatio-temporal patterns of CDOM fluorescence were investigated between August 2004 and March 2006, to quantify the correlation coefficient between CDOM and salinity and to better characterise the contribution of CDOM to K_d. Sampling was conducted at a broad range of UK and Republic of Ireland locations; these included more than 15 estuaries, 30 coastal and 70 offshore sites in the southern North Sea, Irish Sea, Liverpool Bay, Western Approaches and the English Channel.An instrument package was used; a logger with multi-sensor array was deployed vertically through the water column and concurrent water samples were taken to determine salinity, CDOM fluorescence and SPM. Surface CDOM fluorescence values ranged between 0.05 and 16.80 S.Fl.U. (standardised fluorescence units). A strong, negative correlation coefficient of CDOM to salinity (r² = 0.81) was found. CDOM absorption (aCDOM_λ) was derived from fluorescence measurements and was in the range 0.02–2.2 m⁻¹ with mean 0.15 m⁻¹. These results were comparable with direct measurements of aCDOM_λ in the same geographic regions, as published by other workers.Spatial differences in CDOM fluorescence were generally explicable by variation in salinity, in local conditions or catchment areas; e.g. CDOM at the freshwater end was 3.54–11.30 S.Fl.U., reflecting the variety of rivers sampled and their different catchments. Temporal changes in CDOM fluorescence were related to salinity. A significant and positive correlation was found between CDOM and K_d, and although CDOM was found to be less influential than SPM on K_d, it was still of significance particularly in coastal and offshore waters of lower turbidity.     

Spatial and temporal changes in estuarine water quality during a post-flood hypoxic event

A major fish kill occurred in the Richmond River estuary in January 2008 due to oxygen depletion following extensive overbank flooding. This paper examines spatial and temporal changes in the chemistry of main channel waters, thereby identifying the primary sources of deoxygenating water. Over 40 km of the mid- to lower estuary main channel was deoxygenated within seven days of the flood peak. Hypoxia was confined to downstream of the confluences with mid-estuary backswamp basins and occurred during the later phase of the flood recession. Water chemistry at key locations in the estuary indicated elevated concentrations of redox sensitive species associated with acid sulfate soils (ASS) during the hypoxic period. Peak concentrations of Fe²⁺ up to 18.2 μmol L⁻¹, dissolved Mn up to 4.3 μmol L⁻¹, chemical oxygen demand (COD) up to 2052 μmol L⁻¹, dissolved organic carbon (DOC) up to 960 μmol L⁻¹ and elemental S⁰ up to 4.7 μmol L⁻¹ were found in the backswamp discharge confluences and mid-estuary main channel locations. The geochemical signature of main channel floodwaters identifies anaerobic decomposition of floodplain vegetation in ASS backswamps as a primary process leading to generation of hypoxic waters. The transport of these hypoxic floodwaters to the estuary has been accelerated and prolonged by extensive floodplain drainage, thereby enhancing the magnitude and duration of estuarine deoxygenation.     

Spatial and temporal variation in the abundance and composition of ichthyoplankton in a large South Island,New Zealand river estuary

Larval and juvenile fish drifting on ebb tides were collected from early summer to mid autumn at various locations in the Taieri River and Waipori River estuary, South Island, New Zealand. A total of seven species of fish were recorded, however only three species were regularly collected. These were the larval common bully (Gobiomorphus cotidianus McDowall), larval inanga (Galaxias maculatus Jenyns), and postlarval cockabully (Tripterygion nigripenne Valenciennes). Common bully densities were highest in mid January, with the highest densities being recorded drifting out of Lake Waihola. Inanga densities were highest in March and April, with the highest densities being recorded in the channels draining wetland areas where extensive tidal inundation of riparian vegetation occurred. Cockabully were recorded from February to April, mostly at more downstream sites. Inland penetration by marine species was considerable, with two marine species, clingfish (Trachelochismus pinnulatus Forster) and smooth leatherjacket (Parika scaber Forster), being recorded c. 12 km upstream in late summer.     

Spatial and temporal patterns in the hyperbenthic community structure in a warm temperate southern African permanently open estuary

The spatial and temporal patterns in the hyperbenthic community structure (>500 μm) in the warm temperate, permanently open Kariega Estuary situated along the south-eastern coastline of South Africa was investigated monthly over a period of twelve months. Data were collected using a modified hyperbenthic sledge at six stations along the length of the estuary. Physico-chemical data indicate the presence of a constant reverse salinity gradient, with highest salinities measured in the upper reaches and lowest at the mouth of the estuary. Strong seasonal patterns in temperature, dissolved oxygen and total chlorophyll-a (chl-a) concentration were evident. Total average hyperbenthic densities ranged between 0.4 and 166 ind.m⁻³ in the lower net and between 0.2 and 225 ind.m⁻³ in the upper net. Hyperbenthic biomass values ranged between 0.02 and 11.9 mg.dry weight.m⁻³ in the lower net and between 0.02 and 17.4 mg.dry weight.m⁻³ in the upper net. Both the lower and upper nets were numerically dominated by decapods (mainly brachyuran crab zoea) with the exception of June and July 2008 when mysids (mainly Mesopodopsis wooldridgei) dominated, comprising up to 72.4 ± 58.14% of the total abundance in the lower net. A redundancy analysis (RDA) indicated that 99.2% of the variance in the hyperbenthic community structure could be explained by the first two canonical axes. Axis one, which accounted for 96.8% of the total variation detected in the ordination plot was highly correlated with sedimentary organic content and to a lesser extent the chl-a concentration within the Kariega Estuary. The correlations with the second canonical axis (2.4%) were less obvious, however, salinity and seston concentration were weakly correlated with this axis.     

CDOM and its contribution to the underwater light climate of a shallow, microtidal estuary in south-western Australia

Light attenuation (K_d) of photosynthetically active radiation (PAR) by chromophoric dissolved organic matter (CDOM), total suspended solids (TSS) and chlorophyll a (Chl a) were measured at nine stations along an estuarine gradient in the Swan River, Western Australia, over 15 months. There were strong spatial gradients associated with the marine-freshwater transition along the 32 km of estuary sampled, as well as seasonal gradients mainly associated with rainfall, 80% of which occurs between May and September. CDOM absorbances at 440 nm reached a maximum of 10.9 m⁻¹ with the freshwater inflow but concentrations of suspended matter remained low throughout the sampling period (1.0–21.0 mg l⁻¹) under the diurnal tides of the estuary. CDOM was the dominant constituent of K_d and a stepwise multiple regression showed that 66% (p < 0.0001) of the variation in K_d can be explained by CDOM and an additional 8% (p < 0.0001) by TSS. As a consequence of this result, analysis into the influence of river discharge rates on CDOM absorbance levels was examined for 2002 using data collected during this study, and for 2000 and 2001 using historical dissolved organic carbon (DOC) and river discharge data. The outcome of this analysis infers that greater river discharge rates result in increased CDOM absorbances in the Swan River estuary.     

Spatial and temporal variability in particle-bound pesticide exposure and their effects on benthic community structure in a temporarily open estuary

Spatial and temporal variations in particle-bound pesticide contamination, natural environmental variables, and benthic abundance were measured during the dry summer season within a temporarily open estuary (Lourens River). This study focused on the effect of particle-associated pesticides on the dynamics of the benthic community (including epi-benthic, hyper-benthic, and demersal organisms) by comparing two runoff events, differing in their change in pesticide concentration and environmental variables. The two chosen sites were situated within the upper and middle reaches of the estuary and differ significantly in salinity (p = 0.001), flow (p = 0.5), temperature (p < 0.001) and particulate organic carbon in the sediment (p < 0.001). Generally higher particle-bound pesticides were found in the upper reaches.     

Spatial and temporal variations in subsidence due to the natural consolidation and compaction of sediment in the yellow river delta,china

ABSTRACT

The Yellow River Delta, which is the second-largest delta in China, has experienced varying degrees of land subsidence since the late 1970s. Although recent studies have identified the natural consolidation and compaction of sediment among the most important contributors to geologic processes, their processes have rarely been quantified. We estimated the sediment compaction over different time ranges to determine the temporal evolution of subsidence parameters (i.e., cumulative compaction). Estimates of primary consolidation, secondary consolidation, and the degree of consolidation in 152 boreholes revealed the spatial–temporal characteristics of sediment compaction and consolidation using geotechnical parameters collected from 152 boreholes, soil mechanics equations and the Kriging interplolation method. In addition, these estimates were partially constrained and cross-validated using the interferometric synthetic aperture radar (InSAR) results from early 2007 to late 2010 which were provided in a previous study. By performing a comparison analysis between theoretical evaluations of compaction for borehole data and InSAR observations, we were able to quantify subsidence due to sediment compaction. The comparison results suggest that the theoretical solutions agreed well with the measurements recorded by the well-validated, advanced InSAR method and that the deviations between the InSAR technique and geotechnical evaluations ranged from ?22 to 3?mm. The results reveal that the land subsidence of the chosen borehole sites during the investigative period was dominated by the primary consolidation and compaction of sediment. The underprediction of subsidence may be explained by fluid withdrawal, oil exploitation and engineering construction. To speculate, more geological disasters may occur if the current subsidence condition extends into the future.     

Effects of daily nitrogen and phosphorus input on planktonic community metabolism in a semi-enclosed bay by mesocosm experiment

Planktonic metabolism plays an important role in affecting the energy transportation and carbon cycle of the marine ecosystem. However, its regulation mechanism remains unclear under the continuously exogenous nutrient inputs in nearshore waters. In this study, a mesocosm experiment was conducted in a semi-enclosed bay, the Daya Bay, to explore the responses of plankton metabolic balance and community structure to a concentration gradient of daily nitrogen and phosphorus inputs. The results showed that nutrient enrichments promoted phytoplankton biomass, total primary production, and community respiration, and the promoting effect enhanced alongwith the increase of nutrient concentration. However, the net community production fluctuated more violently between autotrophic and heterotrophic with the increase of nutrient inputs and tended to be more heterotrophic from the 5th day to the 10th day of the experiment. In addition, the daily flux of nitrogen and phosphorus, 2 μmol/(L·d) and 0.066 μmol/(L·d), respectively, could be regarded as a potential threshold for ecosystem stability and health, since most of the ecological characteristics related to plankton structure and function have undergone significant changes when the nutrient level is higher than that. In the nearshore enclosed or semi-enclosed waters, nutrient from continuous terrigenous input is likely to be concentrated and exceed this level, indicating the ecological risks due to the metabolic unbalance and the deterioration of plankton community structure.     

Nutrient budgets and trophic state in a hypersaline coastal lagoon: Lagoa de Araruama, Brazil

Lagoa de Araruama in the state of Rio de Janeiro, Brazil, is a hypersaline lagoon with salinity varying spatially from 45 to 56. We collected water samples during monthly cruises throughout the lagoon, and along the streams feeding the system, from April 1991 to March 1992. Nutrients and other water quality parameters exhibited great spatial and temporal variations. Mass balance calculations indicate large amounts of anthropogenic nutrient inputs. The data indicate that the lagoon currently is oligotrophic but is in a state of transition to become a mesotrophic system. Molar dissolved inorganic nitrogen:dissolved inorganic phosphorus (DIN/DIP) varied between 2.2:1 and 659:1 with a volume-weighted average of 22:1. The high DIN/DIP ratio contrasts with that found in nearby lagoons, suggesting that phytoplankton primary production is limited by phosphorus in Lagoa de Araruama. The major loss of DIP is apparently driven by biological assimilation and diagenic reactions in the sediments. Calculations indicate that the lagoon is slightly net autotrophic at +0.9 mol C m⁻² yr⁻¹. This suggests that the biomass of the primary producers is restricted by phosphorus availability. Phosphorus retention in the sediment and the hypersaline state of the lagoon prevent changes in autotrophic communities and the formation of eutrophic conditions.     

Colonization,adaptations and temporal changes in diversity and biomass of a phytoplankton community in upwelled water off the Cape Peninsula,South Africa,in December 1979

The colonization, adaptations and temporal changes in the species diversity and biomass of phytoplankton in an upwelling plume off the Cape Peninsula are described. Certain community characteristics such as biomass, diversity and growth rates were investigated so that successional stages as a result of environmental changes could be characterized. A mixed phytoplankton bloom comprising 49 species developed with Chaetoceros compressus Laud, and Skeletonema costaium (Grev.) Cleve the dominant species. The factors responsible for these species successfully colonizing and dominating are examined with respect to their specific selective adaptations for growth. An attempt is made to determine the mechanism whereby these species dominated, by proposing several possible adaptations in terms of cell size, growth, nutrient absorption and buoyancy. Increase in cell size along the drogue trajectory is considered as a strategy in adapting to the changing environmental conditions.     

Water and fine sediment dynamics in transient river plumes in a small, reef-fringed bay, Guam

Fouha Bay is a 400-m-long funnel-shaped, 10-m-deep, coral-fringed embayment on the southwest coast of Guam. It drains a small catchment area (5 km²) of steeply sloping, highly erodible lateritic soils. River floods are short-lived and the sediment load is very large, with suspended sediment concentration (SSC) exceeding 1000 mg l⁻¹. The resulting river plume is about 1 m thick and is pulsing in a series of 1–2 h-long events, with outflow velocity peaking at 0.05 m s⁻¹. Turbulent entrainment results in an oceanic inflow at depth into the bay. As soon as river flow stops, the plume floats passively and takes 5 days to be flushed out of Fouha Bay. The suspended fine sediment flocculates in 5 min and aggregates on ambient transparent exopolymer particles to form muddy marine snow flocs. In calm weather, about 75% of the riverine mud settles out of the river plume into the underlying oceanic water where it forms a transient nepheloid layer. This mud ultimately settles and is trapped in Fouha Bay. Under typhoon-driven, swell waves, the surface plume is at least 7 m thick and bottom entrainment of mud results in SSC exceeding 1000 mg l⁻¹ for several days. It is suggested that successful management of fringing coral reefs adjacent to volcanic islands may not be possible without proper land use management in the surrounding catchment.     

Spatial and temporal changes in reef fish assemblages on disturbed coral reefs,north Pacific coast of Costa Rica

Benthic structure of coral reefs determines the availability of refuges and food sources. Therefore, structural changes caused by natural and anthropogenic disturbances can have negative impacts on reef‐associated communities. During the 1990s, coral reefs from Bahía Culebra were considered among the most diverse ecosystems along the Pacific coast of Costa Rica; however, recently they have undergone severe deterioration as consequence of chronic stressors such as El Niño‐Southern Oscillation and harmful algal blooms. Reef fish populations in this area have also been intensely exploited. This study compared reef fish assemblages during two periods (1995–1996 and 2014–2016), to determine whether they have experienced changes as a result of natural and anthropogenic disturbances. For both periods, benthic composition and reef fish abundance were recorded using underwater visual censuses. Live coral cover (LCC) decreased from 43.09 ± 18.65% in 1995–1996 to 1.25 ± 2.42% in 2014–2016 (U = 36, p < 0.05). Macroalgal cover (%) in 2014–2016 was sixfold higher than mean values reported for the Eastern Tropical Pacific region. Mean (±SD) fish species richness in 1995–1996 (36.67 ± 14.20) was higher than in 2014–2016 (23.00 ± 9.14; U = 20, p < 0.05). Over 40% of reef fish orders observed in 1995–1996 were not detected in the 2014–2016 surveys, including large‐bodied predators. Reduction in abundance of fish predators such as sharks, grunts, and snappers is likely attributed to changes in habitat structure. Herbivorous such as parrotfishes and pufferfishes increased their abundance at sites with low LCC, probably in response to predators decline and increased algal cover. These findings revealed significant degradation and drastic loss of structural complexity in coral reefs from Bahía Culebra, which now are dominated by macroalgae. The large reduction in structural complexity of coral reefs has resulted in the loss of diversity and key ecological roles (e.g., predation and herbivory), thus potentially reducing the resilience of the entire ecosystem.