A temporal investigation of grazer dynamics, nutrients, seagrass leaf productivity, and epiphyte standing stock

An investigation of seagrass-epiphyte controlling factors was conducted within aThalassia testudinum meadow in Florida Bay from March 2000 to April 2001. Univariate and multivariate analyses were performed using water column nutrient concentrations, temperature, salinity, and turbidity, and gastropod grazer abundances, seagrass leaf area index, and leaf turnover rate data to explain the variation in total epiphyte standing stock, epiphyte chlorophylla, and epiphyte autotrophic index. Turbidity was positively correlated with total epiphyte standing stock and accounted for the most variation. Observations of adhered sediment onT. testudinum leaves and the combination, of increased total epiphyte standing stocks and low autotrophic indices observed in February and April 2001 suggest that the settling of resuspended sediments following turbidity events is one of the temporal mechanisms for increased epiphyte accumulation. Total epiphyte standing stock was also negatively correlated with the abundance of a robust gastropod grazer community dominated byTurbo castanea, Tegula fasciata, andModulus modulus. Distinct temporal size cohorts ofT. castanea andT. fasciata throughout the study period suggest recruitment in spring and an annual lifespan. Nutrient concentrations can also account for some of the temporal variation in total epiphyte standing stock, epiphyte chlorophylla, and autotrophic index. The low variation ofT. testudinum leaf turnover rates was unable to account for any of the variation in the epiphyte parameters.     

The influence of Indian Ocean Dipole (IOD) on biogeochemistry of carbon in the Arabian Sea during 1997–1998

Data on ocean color chlorophylla (Chl a) obtained using Sea-viewing Wide Field of view Sensor (SeaWiFS), sea surface temperature (SST) by Advanced Very High Resolution Radiometer (AVHRR), and sea surface height (SSH) by TOPEX/POSEIDON were analyzed to examine the influence of Indian Ocean Dipole (IOD) on the physical and biogeochemical processes with special reference to phytoplankton primary production and air-sea fluxes of carbon dioxide in the Arabian Sea. Positive SST anomalies (SSTA) were found in the Arabian Sea (0.4 to 1.8°C) with higher values in the southwestern Arabian Sea that decreased towards north. The SSH anomalies (SSHA) and turbulent kinetic energy anomalies (TKEA) suggest decreased mixing during the IOD compared to the normal period. Chlorophylla displayed significant negative correlations with SSTA and SSHA in the Arabian Sea. Consistently, Chla showed negative anomalies (low Chl a) during the IOD period which could be due to reduced inputs of nutrients. The photic zone integrated primary production decreased by 30% during the IOD period compared to the normal whereas pCO₂ levels were higher (by 10–20μatm). However, sea to air fluxes were lower by 10% during the IOD period due to prevailing weaker winds. Primary production seems to be the key process controlling the surface pCO₂ levels in the Arabian Sea. In future, the influence of IOD on ecosystem structure, export production and bacterial respiration rates are to be probed throughin situ time-series observations.     

Import of coastally-derived chlorophylla to South Slough, Oregon

Material transfer between estuaries and the nearshore zone has long been of interest, but information on the processes affecting Pacific Northwest estuaries has lagged behind other areas. The west coast of the U.S. is a region of seasonally variable upwelling that results in enhanced phytoplankton production in the nearshore zone. We examined estuarine-nearshore links over time by measuring physical oceanographic variables and chlorophylla concentration from an anchor station in South Slough, Oregon. Data was collected during 24-h cruises conducted at approximately weekly intervals during summer 1996 and spring 1997. The results demonstrate that the physical oceanography of this estuarine site was strongly influenced by the coastal ocean. Marine water reached the estuarine site on every sampled tide, and chlorophylla was clearly advected into the estuary with this ocean water. In contrast, phytoplankton concentrations were comparatively reduced in the estuarine water. There were, however, large fluctuations in the import of chlorophyll over the course of the summer. These variations likely reflect upwelling-generated phytoplankton production in the coastal ocean and subsequent cross-shelf transport to the estuary. Suspension feeding organisms in South Slough likely depend on the advection of this coastally-derived phytoplankton. The large allochthonous chlorophyll input measured for this system appears dissimilar from most estuaries studied to date. Previous investigations have focused on the outwelling and inwelling of materials in estuaries. We must now consider the influence of coastal upwelling and downwelling processes on estuarine material exchange.     

Biomass and productivity of three phytoplankton size classes in San Francisco Bay

Primary productivity of three size classes of phytoplankton (<5 μm, 5–22 μm, >22 μm) was measured monthly at six sites within San Francisco Bay throughout 1980. These sites in the three principal embayments were chosen to represent a range of environments, phytoplankton communities, and seasonal cycles in the estuary. Temporal variations in productivity for each size class generaly followed the seasonality of the corresponding fraction of phytoplankton biomass. The 5–22 μm size class accounted for 40 to 50% of the annual production in each embayment, but production by phytoplankton >22 μm ranged from 26% in the southern reach to 54% of total phytoplankton production in the landward embayment of the northern reach. A productivity index is derived that predicts daily productivity for each size class as a function of ambient irradiance and integrated chlorophylla in the photic zone. For the whole phytoplankton community and for each size class, this index was constant and estimated as ?0.76 g C m^?2 (g chlorophylla Einstein)^?1. The annual means of maximum carbon assimilation numbers were usually similar for the three size classes. Spatial and temporal variations in size-fractionated productivity are shown to be primarily due to differences in biomass rather than size-dependent carbon assimilation rates. *** DIRECT SUPPORT *** A01BY034 00005     

On the ecology of oligochaetes: Monthly variation of community composition and environmental characteristics in two South Carolina tidal creeks

In the tidal creeks of the southeastern United States, the numerically and ecologically dominant macrobenthic organisms are typically oligochaetes. Due to their relatively small size and difficult taxonomy, little is known about the short-term and seasonal changes in the oligochaetes of tidal creeks. This study presents a report of the spatial and temporal changes of the oligochaete taxa within and between two tidal creeks in southern South Carolina, at monthly intervals over a 13-month period. These changes are framed within the reference of monthly changes in benthic chlorophylla, sediment composition, and porewater ammonia, as well as in the perspective of seasonal changes in the entire tidal creek macrobenthic community. The most abundant oligochaete found in this study was the tubificidMonopylephorus rubroniveus, followed by the naidParanais litoralis and the tubificidsTubificoides heterochaetus andT. brownae. All of the oligochaetes exhibited strong month-to-month and spatial changes, indicative of changes in water quality and sediment habitat characteristics (e.g., low dissolved oxygen, high benthic chlorophylla). There were significant correlations between the abundance of most species and either benthic chlorophylla concentration or the silt-clay fraction of the sediment. Looking at short-term changes in this rapidly changing component of the macrobenthic community provides insight not only into the ecology of the oligochaetes, but also into the changes in the tidal creek ecosystem and their potential effects on other biota.     

Distribution of nutrients and chlorophyll a in the Three-Gorges Reservoir, China

1IntroductionUp to now,eutrophication is still a problem af-fecting water quality in many developing countries.Themost important nutrients causing eutrophication arephosphates,nitrates and ammonia(Lijklema,1995;Horne and Goldman,1994).Eutrophic waters are…     

A simple empirical optical model for simulating light attenuation variability in a partially mixed estuary

Representation of the subsurface light field is a crucial component of pelagic ecosystem and water quality models. Modeling the light field in estuaries is a particularly complicated problem due to the significant influence of high concentrations of dissolved and particulate matter that are derived from both terrestrial and estuarine sources. The goal of this study was to develop a relatively simple but effective way to model light attenuation variability in a turbuid estuary (Chesapeake Bay, United States) in a coupled physical-biological model. We adopted a simple, nonspectral empirical approach. Surface water quality data (salinity was used as a proxy of chromophoric dissolved organic matter [CDOM]) and light measurements from the Chesapeake Bay Program were used to determine the absorption coefficients in a linear attenuation model using regression methods. This model predicts K_c (specific attenuation due to phytoplankton/chlorophylla [chla]), K_t (specific attenuation due to total suspended solids), and K_s (a function of specific attenuation coefficients of CDOM in relation to salinity). The Bay-wide fitted relation between the light attenuation coefficient and water quality concentrations gives generally good estimates of total light attenuation, K_d. The direct inclusion of salinity in the relationship has one disadvantage: it can yield negative values for K_d at high salinities. We developed two separate models for two different salinity regimes. This approach, in addition to solving the negative K_d problem, also accounts for some changes in specific light absorption by chla, seston (nonphytoplankton particulate matter), and CDOM that apparently occur in different salinity regimes in Chesapeake Bay. The resulting model predicts the statistical characteristics (i.e., the mean and variance) of K_d quite accurately in most regions of Chesapeake Bay. We also discuss in this paper the feasibility and caveats of using K_d converted from Secchi depth in the empirical method.     

Succession of microphytobenthos in a restored coastal wetland

Sediment microphytobenthos, such as diatoms and photosynthetic bacteria, are functionally important components of food webs and are key mediators of nutrient dynamics in marine wetlands. The medium to long-term recovery of benthic microproducers in restored habitats designed to improve degraded coastal wetland sites is largely unknown. Using taxon-specific photopigments, we describe the composition of microphytobenthic communities in a large restoration site in southern California and differences in the temporal recovery of biomass (chlorophylla), composition, and taxonomic diversity between vegetatedSpartina foliosa salt marsh and unvegetated mudflat. Visually distinct, spatially discreet, microphytobenthic patches appeared after no more than 7 mo within the restoration site and were distinguished by significant differences in biomass, taxonomic diversity, and the relative abundance of cyanobacteria versus diatoms. Sediment chlorophylla concentrations within the restored site were similar to concentrations in nearby natural habitat 0.2–2.2 yr following marsh creation, suggesting rapid colonization by microproducers. RestoredSpartina marsh very rapidly (between 0.2 and 1.2 yr) acquired microphytobenthic communities of similar composition and diversity to those in naturalSpartina habitat, but restored mudflats took at least 1.6 to 2.2 yr to resemble natural mudflats. These results suggest relatively rapid recovery of microphytobenthic communities at the level of major taxonomic groups. Sediment features, such as pore water salinity andSpartina density, explained little variation in microphytobenthic taxonomic composition. The data imply that provision of structural heterogeneity in wetland construction (such as pools and vascular plants) might speed development of microproducer communities, but no direct seeding of sediment microfloras may be necessary.     

Primary productivity in the German Bight (1994–1996)

Within the KUSTOS program (Coastal Mass and Energy Fluxes-the Land-Sea Transition in the Southeastern North Sea) 28 to 36 German Bight stations were seasonally surveyed (summer 1994, spring 1995, winter 1995–1996) for light conditions, dissolved inorganic nutrient concentrations, chlorophylla (chla), and photosynthesis versus light intensity (P:E) parameters. Combining P:E curve characteristics with irradiance, attenuation, and chlorophyll data resulted in seasonal estimates of the spatial distribution of total primary production. These data were used for an annual estimate of the total primary production in the Bight. In winter 1996 the water throughout the German Bight was well mixed. Dissolved inorganic nutrient concentrations were relatively high (nitrogen [DIN], soluble reactive phosphorus [SRP], and silicate [Si]: 23, 1, and 10 μM, respectively). Chla levels generally were low (< 2 μg l⁻¹) with higher concentrations (4–16 μg l⁻¹) in North Frisian coastal waters. Phytoplankton was limited by light. Total primary production averaged 0.2 g C m⁻² d⁻¹. Two surveys in April and May 1995 captured the buildup of a strong seasonal thermo-cline accompained by the development of a typical spring diatom bloom. High nutrient levels in the mixed layer during the first survey (DIN, SRP, and Si: 46, 0.45, and 11 μM, respectively) decreased towards the second survey (DIN, SRP, and Si: 30.5, 0.12, and 1.5 μM, respectively) and average nutrient ratios shifted further towards highly imbalanced values (DIN:SRP: 136 in survey 1, 580 in survey 2; DIN:Si: 13.5 in survey 1, 96 in survey 2). Chla ranged from 2 to 16 μg l⁻¹ for the first survey and rose to 12–50 μg l⁻¹ in the second survey. Phytoplankton in nearshore areas continued to be light limited during the second survey, while data from the stratified regions in the open German Bight indicates SRP and Si limitation. Total primary production ranged from 4.0 to 6.3 g C m⁻² d⁻¹. During summer 1994 a strong thermal stratification was present in the German Bight proper and shallow coastal areas showed unusually warm (up to 22°C), mixed waters. Chla concentrations ranged from 2 to 18 μg l⁻¹. P:E characteristics were relatively high despite the low nutrient regime (DIN, SRP, and Si: 2, 0.2, and 1.5 μM, respectively), resulting in overall high total primary production values with an average of 7.7 g C m⁻² d⁻¹. Based on the seasonal primary production estimates of the described surveys a budget calculation yielded a total annual production of 430 g C m⁻² yr⁻¹ for the German Bight.     

Assessment of present and future nitrogen loads, water quality, and seagrass (Thalassia testudinum) depth distribution in Lemon Bay, Florida

Nitrogen loads into Lemon Bay, Florida were modeled to have increased ca. 59% between pre-development (i.e., 1850) estimates (5.3 kg TN ha⁻¹ yr⁻¹. and estimates for the year 1995 (8.4 kg TN ha⁻¹ yr⁻¹). By the year 2010, nitrogen loads are predicted to increase an additional 45% or 58%, depending upon progress being made toward replacing older septic tank systems with centralized sewerage (nitrogen loads of 12.2 and 13.3 kg TN ha⁻¹ yr⁻¹, respectively). Using 1995 estimates, nonpoint sources (stormwater runoff) are throught to be responsible for ca. 76% of the annual nitrogen load, followed by septic tank systems (14%), rainfall (10%), and an insignificant load from baseflow. Based on an empirically-derived nitrogen load:chlorophylla relationship developed for a portion of nearby Tampa Bay, a 45% increase in nitrogen loads into Lemon Bay could result in a 29% increase in annual average chlorophylla concentrations. Using the estimate of a 29% increase in future chlorophylla concentrations, an empirically-derived optical model for Lemon Bay suggests that light attenuation coefficients in the bay would increase ca. 9%, and the average depth limit ofThalassia testudinum in Lemon Bay would decrease by ca. 24%.     

Sedimentation of particulate matter in the Dona Paula Bay, West Coast of India during November to May 1995–1997

Data on hydrography, nutrients, suspended particles, and sedimented particles were collected at weekly intervals from November to May during 1995 to 1997 at a station in the coastal waters of Dona Paula Bay, India. Suspended and sedimented particles were analyzed for total suspended matter (SPM), total sedimented particulate matter (TPM), particulate organic carbon (POC), particulate organic nitrogen (PON), chlorophylla (chla), and diatom abundance. Variations in hydrography and nutrients influenced the quantity and composition of sedimented particles. The TPM, POC, PON, and chla fluxes showed small-scale seasonal variations and were higher in the summer (February to May) than in the winter (November to January). Resuspension of carbon accounted for approximately 25% of the gross POC and was highest in April 1997 (45%). The mean net POC flux was 197±90 mg C m⁻² d⁻¹ and accounts for 4.6% of the TPM. The average C∶N (w∶w) ratio of the sedimented material was 13.2±6.6. The POC:chla ratio was relatively higher in the sedimented material as compared to the suspended material. The particulate carbon reaching the bottom sediment was 39% of the primary production. The low organic carbon concentration (approximately 0.1% of dry sediment) in the sediments implies that about 98% of the sedimented carbon was either consumed at the sedimentwater interface or resuspended/advected before it was finally buried into the sediments.     

The influence of mussel beds on nutrients in the Western Wadden Sea and Eastern Scheldt estuaries

The uptake and release of materials by intertidal mussel beds were directly measured in two cultivated Dutch estuaries. Generally, chlorophylla, seston, and particulate organic carbon were taken up, while ammonium, orthophosphate, and silicate were released. The observed rates were higher than values computed from organismic observations and similar to those observed for intertidal oyster reefs in South Carolina. Specific estuarine material turnover rates varied from 1 week to 38 weeks when calculated with mussel bed fluxes. The fastest turnover rates were for chlorophylla and ammonium. These results support the idea that dense assemblages of bivalves are major components in the recycling of nutrients in estuaries.     

Sediment grain size effect on benthic microalgal biomass in shallow aquatic ecosystems

Benthic microalgal biomass is an important fraction of the primary producer community in shallow water ecosystems, and the factors controlling benthic microalgal biomass are complex. One possible controlling factor is sediment grain-size distribution. Benthic microalgal biomass was sampled in sediments collected from two sets of North Carolina estuaries Massachusetts and Cape Cod bays, and Manukau Harbour in New Zealand. Comparisons of benthic microalgal biomass and sediment grain-size distributions in these coastal and estuarine ecosystems frequently showed a negative relationship between the proportion of fine-grained sediments and benthic microalgal biomass measured as chlorophylla. The highest sedimentary chlorophylla levels generally occurred in sediments with lower percentages of fine particles (diameter <125 mm). A negative relationship between the proportion of fine sediments and benthic microalgal biomass suggests anthropogenic loadings of fine sediment may reduce the biological productivity of shallow-water ecosystems.     

Development of a framework of automated water quality parameter optimization and its application

This paper presents a methodology and framework for the development of an automated least-squares optimization tool for calibrating water quality parameters in QUAL2E. The method has been applied to estimate the optimal water quality parameters in simulation of stream water quality for the Anyang stream in Korea. The Monte Carlo analysis is used to assess the relative importance of model parameters for water quality constituents. It is found that μ_max and ρ are the most influential parameters for Chlorophyll-a modeling and K ₁ and K ₃ are critical parameters for variation of DO and BOD in the Anyang stream. A computer program for automated parameter calibration has been developed using a nonlinear GRG optimization algorithm. The application framework provides an intuitive and easy-to-use interface and allows visual evaluation of results. According to the simulation results, the automated approach is computationally efficient for evaluation of model parameters and converges on a best fit more rapidly and reliably than a trial and error method. The methodology proposed herein can be extended to other models to obtain the best possible parameter values.     

Phytoplankton, nutrients, and transparency in Danish coastal waters

We present a comparative analysis of 1400 data series of water chemistry (particularly nitrogen and phosphorus concentrations), phytoplankton biomass as chlorophylla (chla) concentrations, concentrations of suspended matter and Secchi depth transparency collected from the mid-1980s to the mid-1990s from 162 stations in 27 Danish fjords and coastal waters. The results demonstrate that Danish coastal waters were heavily eutrophied and had high particle concentrations and turbid waters. Median values were 5.1 μg chla 1⁻¹, 10.0 mg DW 1⁻¹ of suspended particles, and Secchi depth of 3.6 m. Chlorophyll concentration was strongly linked to the total-nitrogen concentration. The strength of this relationship increased from spring to summer as the concentration of total nitrogen declined. During summer, total nitrogen concentrations accounted for about 60% of the variability in chlorophyll concentrations among the different coastal systems. The relationship between chlorophyll and total phosphorus was more consistant over the year and correlations were much weaker than encountered for total nitrogen. Secchi depth could be predicted with good precision from measurements of chlorophyll and suspended matter. In a multiple stepwise regression model with In-transformed values the two variables accounted for most of the variability in water transparency for the different seasons and the period March–October as a whole (c. 80%). We were able to demonstrate a significant relationship between total nitrogen and Secchi depth, with important implications for management purposes.     

The light transmission and seiche depth of Izmir Bay,western Turkey

Izmir Bay is one of the most polluted estuaries in the whole Mediterranean Sea. The inner part of the Bay (Inner Bay) is heavily affected by domestic and industrial discharge. As a result of these loads, strong eutrophication occurs in the Inner Bay, which is temporally anaerobic. The ecologically sensitive approach of the local authorities during the last decade has given rise to a wide variety of monitoring and research studies on this bay. On the other hand, the municipality of Izmir started to operate wastewater treatment facilities since January 2000. The Institute of Marine Sciences and Technology — Izmir (IMST) with its research vessel R/V K Piri Reis has been conducting an intensive monitoring program since 1988 and especially during the recent few years. These investigations provide an opportunity for the evaluation of the performance of the wastewater treatment plant in terms of the change in the optical properties of Izmir Bay water in a positive manner. The turbidity values measured in these monitoring studies indicate that the values have changed drastically after January 2000. Their spatial variation indicates that the values decrease from the Inner Bay towards the Aegean Sea. The turbidity (light transmission) values are measured with an automatic CTD (conductivity, temperature and depth) system during each cruise. The seiche disc depth measurement is carried out only occasionally. The accuracy of the seiche disc depth is dependent on certain daylight conditions and depends on the operator. The seiche disc depth (D _s) is an important parameter to estimate primary production of organic matter (hereafter called production). A relation between light transmission (turbidity) value and seiche disc depth (D _s) is found with very good agreement. The correlations are very high (approximately 0.94) with slight seasonal variation.     

Spatial and temporal dynamics of epiphytic microalgae on the cordgrassSpartina alterniflora in North Inlet Estuary, South Carolina

Epiphytic microbial biomass (as chlorophylla) was measured monthly in North Inlet Estuary, South Carolina, for 16 months on spatially distinct stem sections (bottom and middle) of dead and livingSpartina alterniflora growth forms (tall, medium, and short) exposed at low tide. The highest biomass was located on the bottom section of tall plants, presumably due to their relatively longer contact with creek water and associated phytoplankton, and their closer proximity to marsh sediments with associated benthic microalgae, both recruitment sources for epiphytes. Dead plants left standing from the previous year’s growth cycle had higher epiphytic biomass than living plants, which occurred mostly in late spring through fall. Epiphytic biomass was highest in the winter (mean of 1.77 mg chla (m² marsh)⁻¹) and lowest in the summer (mean of 0.34 mg chla (m² marsh)⁻¹). Because phytoplankton andSpartina production are lowest in the winter, the results emphasize the relative importance of epiphytes to growth of herbivores in this season.     

Distribution of particulate organic carbon in the central Bay of Bengal

Particulate organic carbon (POC) was measured for 77 water samples collected over a 3000 m water column along 88° E in the central Bay of Bengal. The POC values varied from 80 to 895 μg per litre at the surface and 171 to 261 μg per litre at 2000 m. The POC decreased with increasing water depth at all the stations. Deep water concentrations of POC were higher than those reported from other oceanic waters. Distribution of POC was not influenced by water masses. The POC was not significantly correlated with chlorophylla.     

Microplankton metabolism along a trophic gradient in a shallow-temperate estuary

Microplankton metabolism was studied in the Urdaibai estuary from June 1996 to May 1997 to investigate the factors that control the autotrophic-heterotrophic balance in three zones of contrasting trophic status. Gross primary production (GPP) and dark oxygen consumption (R) were measured from the upper eutrophic reaches to the lower marine segment for unfractionated samples as well as for nanoplankton (<20 μm) and ultraplankton (<5 μm). Microplankton composition differed in the three segments and the peaks of abundance were uncoupled. Microplankton biomass both as carbon content and chlorophylla concentration decreased seaward. Size-fractionated metabolism was to a great extent conducted by the dominant species in the upper and middle reaches, where GPP and R rates were frequently coupled. In the lower marine estuary GPP experienced marked seasonal changes while R rates were rather constant and uncoupled to GPP. In the upper and lower estuary the gross primary production:respiration (P:R) ratio of the nonfractionated samples were >1 only during peak values of production, whilst in the middle estuary they were almost always ≥1. Ultraplankton was generally heterotrophic in the three zones. The relative importance of the <5 μm fraction increased seaward for both GPP and R rates. This size class was responsible for most of the oxygen consumption in the middle and lower estuary, while in the upper estuary the 5–20 μm size fraction was also relevant. During periods of enhanced phytoplankton growth, less than 20% of the total GPP was instantaneously respired in the three segments. In periods between peaks, only in the middle estuary was some percentage of the GPP not instantaneously processed. The percentage of the fractionated primary production respired in each size fraction was highly variable, although the highest values were found in the <5 μm for all stations.