Ecological status assessment in the lower Eo estuary (Spain). The challenge of habitat heterogeneity integration: a benthic perspective

The implementation of the European Water Framework Directive (WFD) requires evaluation of the ecological status (ES) of benthic communities in coastal and transitional water systems, and the intercalibration of assessment methodologies therefore becomes a research challenge. Our aim was to test the suitability of applying the M-AMBI index to assess the status of the Eo estuary (northern coast of Spain). Our results showed that M-AMBI was influenced by the natural variability of benthic communities, and presented an apparent dependence on habitat characteristics. Consequently, the definition of homogeneous areas in transitional water systems should be based on the salinity gradient combined with other factors. To achieve an accurate ES assessment, habitat-specific reference conditions should then be defined prior to the application of M-AMBI; this necessitates dividing an estuary into several sections, which may be classified as different ESs. From this perspective, a novel approach to integrate habitat heterogeneity in a global ES assessment was tested.     

Coastal defence through low crested breakwater structures: jumping out of the frying pan into the fire?

The Adriatic coast of Punta Marina (Ravenna) is protected by 3-km long low crested breakwater structures (LCSs). Through a 3-years long multidisciplinar study, we assessed the impact of such defensive structures on environmental and biological condition. LCSs create pools where conditions are very different from the surrounding nearshore system. Mechanical disturbance by currents and waves varied greatly in intensity and frequency between seaward and landward sides of the structures. Sedimentary budget was positive at the landward side, but it was due to a gain on the seafloor and not on the emerged beach. The budget at seaward was negative. LCSs determine differences in benthic assemblages, alter the seasonal pattern of communities, and modify seasonal fluctuations of animal assemblages. Landward sheltered areas can be seen as “lagoonal island” surrounded by a “sea of marine habitat”. Differences in ecological quality status, obtained through M-AMBI, are due to the sum of these factors.     

Spatial distribution of cadmium and lead in the sediments of the western Anzali wetlands on the coast of the Caspian Sea (Iran)

Spatial distribution patterns of total cadmium (Cd) and lead (Pb), their bioavailable fractions and total organic matter in sediment from Anzali wetlands are provided. Total sediment Pb was higher than Cd (34.95 versus 0.024 μg/g dry weight). The geoaccumulation index indicated that the sediment was “uncontaminated”, but some stations were categorized as “unpolluted” to “moderately polluted”. Less than 0.01 of Pb existed in exchangeable and carbonate fractions. The sum of exchangeable and carbonate-bound fractions of Cd was 42%, suggesting that Cd poses high risk to the aquatic ecosystems. Total Cd and Pb exhibited positive relationships with total organic matter. Considering spatial distribution maps of total and bioavailable fractions of metals suggested that high concentrations of metals does not necessarily indicate high bioavailable fraction. The methodologies we used in this study can be in more effective management of aquatic ecosystems, as well as ecological risk assessment of metals, and remediation programs.     

Long-term trends in benthic habitat quality as determined by Multivariate AMBI and Infaunal Quality Index in relation to natural variability: a case study in Kinsale Harbour, south coast of Ireland

Benthic Ecological Quality Ratios (EQR) are important tools for assessing the ecological status of coastal and transitional water bodies. Here, we use spatial and time-series data from Kinsale Harbour, Ireland to examine the effects of sample processing methodologies on the outputs of two EQRs: Multivariate AMBI (M-AMBI) and Infaunal Quality Index (IQI).Both EQRs were robust to changes in sieve size from 1 mm to 0.5 mm, and to changes in the taxa identified in spatial calibration. Both EQRs classified habitat quality in Kinsale as generally Good or High with no evidence of significant change over the time series (1981-2006). IQI classified the ecological status as higher than M-AMBI.There was a significant relationship between IQI and M-AMBI in spatial calibration, but no significant relationship between them in time series. Further research into the behaviour of EQRs in relation to natural variability over long time-scales is needed to discriminate anthropogenic impacts reliably.     

Macrophyte-based bioindication in rivers - A comparative evaluation of the reference index (RI) and the trophic index of macrophytes (TIM)

Submerged macrophyte vegetation has been mapped in four calcareous groundwater-fed streams in Bavaria (southern Germany) in order to compare and assess two different methods of river bioindication. The first one, the trophic index of macrophytes (TIM), is a tool to assess the trophic status of running waters. In contrast, the reference index (RI) is an ecological index which evaluates the difference between a reference community and the actual submerged vegetation, depending on the river type, as required by the Water Framework Directive. Water nutrient concentrations were measured once at selected sites in all water courses.The TIM reflects water phosphorus concentrations, accounting also for nutrients enrichment in the sediment, and is not influenced by shading, depth, substrate and flow velocity of the water course. The TIM is very sensitive to small variations in P concentration when the P level is low, while the index tends to a maximum as soluble reactive phosphorus (SRP) and total phosphorus (Ptot) exceed a certain value.The RI indicates river ecological status which is not only influenced by trophic status but by every factor leading to a deviation of the actual macrophyte community from the reference community. In the investigated rivers the RI indicated reduced flow velocity caused by milldams and shading by riparian vegetation, in addition to trophic status.In rivers that are at the boundary between two different river types, classification of river type can play a crucial role for river status assessment. Incorrect classification of river type can lead to both, a “too good” and “too bad” assessment.     

Comparing long term sediment records to current biological quality element data - Implications for bioassessment and management of a eutrophic lake

Defining reference conditions for lakes situated in areas of human settlement and agriculture is rarely straightforward, and is especially difficult within easily eroding and nutrient rich watersheds. We used diatoms, cyanobaterial akinetes, remains of green algae and chironomid head capsules from sediment samples of Lake Kirmanjärvi, Finland, to assess its deviation from the initial ecological status. These site-specific records of change were compared to current type-specific ecological status assessment. All paleolimnological data indicated deviation from natural conditions and mirrored the current, monitoring-based assessment of “moderate” ecological lake status. However, the sediment data showed that the lake should be re-typified as a naturally eutrophic lake. Sediment records as well as current monitoring data indicated temporary improvement in water quality in response to extensive fish manipulation. Our results suggest that paleolimnological records can be used to derive site-specific reference conditions and that extensive restoration efforts can result in gradual, observable improvements of water quality and ecological status.     

Assessment of the ecological quality status of soft-bottoms in Reunion Island (tropical Southwest Indian Ocean) using AZTI marine biotic indices

The ability of the two synthetic marine biotic indices, AMBI and M-AMBI, to account for changes in the ecological quality of coastal soft bottoms of Reunion Island according to disturbances was assessed from macrobenthic samples collected in five sectors between 1994 and 2004. Samples were collected under non-perturbed conditions and at two sites subjected to heavy organic enrichment. Both indices are based on a classification of macrofauna into ecological groups (EG), and their transfer to tropical waters required some adaptations. These indices proved efficient in detecting a degradation of habitat quality. Their use resulted in the classification of all sites sampled between 1996 and 1998 as "good" or "high". M-AMBI nevertheless tended to result in the attribution of a slightly worse ecological quality status than AMBI. Together with an update of the EG species list for the Indian Ocean area, our results support the extension of both indices for the assessment of tropical soft bottoms.     

Do macrophytes, diatoms and non-diatom benthic algae give redundant information? Results from a case study in Poland

We analyzed species composition and abundance of macrophytes, diatoms and non-diatom benthic algae, water chemistry and habitat structure of 24 river sites in Poland, in order to better understand which parameters structure macrophyte and benthic algae communities. Community patterns for macrophytes and diatoms are most closely related, while macrophytes and non-diatom benthic algae have the weakest relationship. Environmental parameters best explaining community patterns are channel substrate parameters for non-diatom benthic algae, and a combination of channel substrate and river bank characteristics for submerged macrophytes, emergent macrophytes and diatoms. Among the organism groups investigated, the diatom community pattern is best correlated to the environmental data similarity matrix. We hypothesize that the results can be explained by the shorter generation time of diatoms compared to macrophytes, and by a higher dispersal rate of diatoms compared to macrophytes and non-diatom benthic algae. This has several practical consequences for bioindication: (1) Diatoms are usually the organism group most closely following environmental parameters, for both increasing and decreasing impact. (2) Since the biotic indices developed for the Water Framework Directive are meant to primarily indicate ecological changes, not water chemistry, the nature of diatoms to closely reflect water chemistry is not necessarily advantageous. (3) The applicability of macrophyte and probably also non-diatom benthic algae indices is more locally restricted, while diatom indices are applicable to greater areas. (4) In ecosystems which are subject to changing environmental conditions, differences in biotic indices between macrophytes, diatoms and non-diatom benthic algae are to be expected. These differences could provide information relating to ecosystem stability. (5) In stable ecosystems, analyzing one of the three organism groups “diatoms”, “non-diatom benthic algae” and “macrophytes” will be sufficient to characterize the quality element “macrophytes and phytobenthos”, as required by the Water Framework Directive. However, in ecosystems subject to increasing pressure, macrophytes likely will have a tendency to indicate “too good”, while in ecosystems subject to decreasing pressure, diatoms will have a tendency to indicate “too good”.     

Is it possible to assess the ecological status of highly stressed natural estuarine environments using macroinvertebrates indices?

Several biotic indices have been proposed for the assessment of the ecological status of benthic macroinvertebrates in marine waters, although none have been generally accepted. When it comes to assessing highly stressed natural environments, such as estuaries, the controversy and uncertainty is much higher than for any given normal index. In this article, we test the behavior and suitability of different biotic indices proposed under the perspective of the Water Framework Directive (S, H, AMBI, M-AMBI, BQI, W-statistic, Taxonomic distinctness) for the assessment of estuaries in northern Spain. The low species richness and dominance of a few tolerant species in the characteristic community of these estuaries presented a challenge to the application of the biotic indices tested. Combined approaches that integrate different aspects of water quality and ecosystem functionality could increase the reliability of the ecological assessment of these transitional waters.     

Comparison of methods for integrating biological and physical data for marine habitat mapping and classification

An important first step in marine spatial planning and ecosystem-based management efforts is the creation of benthic habitat maps that allow scientists and managers to understand the distribution of living and non-living resources on the seafloor. However, the location of boundaries between and composition of habitats is highly dependent on the approach taken to integrate abiotic and biotic information. The purpose of this study was to test “top-down” and “bottom-up” approaches for integrating physical and biological data derived from commonly used sub-tidal benthic mapping tools to create a habitat map compatible with the US Coastal and Marine Ecological Classification Standard (CMECS). We found that a top-down framework, where we tested for differences in macrofauna assemblages among side scan sonar facies, defined two broad-scale and general habitats. Using the bottom-up approach, where patterns in abiotic and biotic variables were examined with multivariate statistics (BEST, LINKTREE, ANOSIM, SIMPER), we generated seven biotopes based on the macrofauna abundance, percent sand, water depth, and backscatter standard deviation that corresponded well to, but provided more fine-scale detail than the top-down habitats. We were able to use the statistical relationship between abiotic variables and macrofauna assemblages in the LINKTREE to predict the spatial distribution of assemblages over ∼50% of the study area. We created a local catalogue of biotopes specific to our study area that contributes to the CMECS library. In addition, we were able to fully map CMECS Geoform, Surface Geology, and Biotic Cover Components. This mapping effort represented real progress toward reconciling the “data density mismatch” between physical and biological mapping methods, and it provided further evidence that using a bottom-up methodology preserves species–environment relationships.     

Ballast water as a vector of coral pathogens in the Gulf of Mexico: the case of the Cayo Arcas coral reef

The discharge of nutrients, phytoplankton and pathogenic bacteria through ballast water may threaten the Cayo Arcas reef system. To assess this threat, the quality of ballast water and presence of coral reef pathogenic bacteria in 30 oil tankers loaded at the PEMEX Cayo Arcas crude oil terminal were determined. The water transported in the ships originated from coastal, oceanic or riverine regions. Statistical associations among quality parameters and bacteria were tested using redundancy analysis (RDA). In contrast with coastal or oceanic water, the riverine water had high concentrations of coliforms, including Vibrio cholerae 01 and, Serratia marcescens and Sphingomona spp., which are frequently associated with “white pox” and “white plague type II” coral diseases. There were also high nutrient concentrations and low water quality index values (WQI and TRIX). The presence of V. cholerae 01 highlights the need for testing ballast water coming from endemic regions into Mexican ports.     

Response of single benthic metrics and multi-metric methods to anthropogenic pressure gradients, in five distinct European coastal and transitional ecosystems

In recent times many benthic indices have been proposed to assess the ecological quality of marine waters worldwide. In this study we compared single metrics and multi-metric methods to assess coastal and transitional benthic status along human pressure gradients in five distinct environments across Europe: Varna bay and lake (Bulgaria), Lesina lagoon (Italy), Mondego estuary (Portugal), Basque coast (Spain) and Oslofjord (Norway). Hence, 13 single metrics (abundance, number of taxa, and several diversity and sensitivity indices) and eight of the most common indices used within the European Water Framework Directive (WFD) for benthic assessment were selected: index of size spectra (ISS), Benthic assessment tool (BAT), Norwegian quality index (NQI), Multivariate AMBI (M-AMBI), Benthic quality index (BQI), (Benthic ecosystem quality index (BEQI), Benthic index based on taxonomic sufficiency (BITS), and infaunal quality index (IQI). Within each system, sampling sites were ordered in an increasing pressure gradient according to a preliminary classification based on professional judgement. The different indices are largely consistent in their response to pressure gradient, except in some particular cases (i.e. BITS, in all cases, or ISS when a low number of individuals is present). Inconsistencies between indicator responses were most pronounced in transitional waters (i.e. IQI, BEQI), highlighting the difficulties of the generic application of indicators to all marine, estuarine and lagoonal environments. However, some of the single (i.e. ecological groups approach, diversity, richness) and multi-metric methods (i.e. BAT, M-AMBI, NQI) were able to detect such gradients both in transitional and coastal environments, being these multi-metric methods more consistent in the detection than single indices. This study highlights the importance of survey design and good reference conditions for some indicators. The agreement observed between different methodologies and their ability to detect quality trends across distinct environments constitutes a promising result for the implementation of the WFD’s monitoring plans. Moreover, these results have management implications, regarding the dangers of misclassification, uncertainty in the assessment, use of conflicting indices, and testing and validation of indices.     

Spatial assessment of fishing effort around European marine reserves: implications for successful fisheries management

We examined the spatial dynamic of artisanal fishing fleets around five European marine protected areas (MPAs) to derive general implications for the evaluation of MPAs as fisheries management tools. The coastal MPAs studied were located off France, Malta and Spain and presented a variety of spatial designs and processes of establishment. We developed a standardized methodology to define factors influencing effort allocation and to produce fishing effort maps by merging GIS with geostatistical modelling techniques. Results revealed that in most cases the factors “distance to the no-take”, “water depth”, and “distance to the port” had a significant influence on effort allocation by the fishing fleets. Overall, we found local concentration of fishing effort around the MPA borders. Thus, neglecting the pattern of fishing effort distribution in evaluating MPA benefits, such as spillover of biomass, could hamper sound interpretation of MPAs as fisheries management tools.     

The impact of different spatial land cover data sets on the outputs of a hydrological model - a modelling exercise in the Ucker catchment, North-East Germany

The spatial distribution of forests, meadows, arable land, water bodies and settlements in a catchment influences the spatial and temporal dynamics of evapotranspiration, surface runoff, soil moisture and ground water recharge. Four digital data sets from different sources were available for land cover distribution to be applied in a regional case study in the Ucker catchment with an area of about 2415 km². The first data set was obtained from the German digital topographic data set “Atkis” and the second one from the federal German biotope mapping procedure “Biotoptypenkartierung”. In addition, Corine land cover data and a land cover obtained from a supervised, multitemporal classification of three Landsat-TM5-scenes from the year 2000 were used in our study. These data sets differ in spatial resolution and in information content and this leads to different areal proportions of the main land cover classes forests, meadows, arable land, water bodies and settlements. This has to be considered as an uncertainty in the land cover data. In our case study, we analyzed how and to which extent this uncertainty influences the outputs of a hydrological catchment model such as evapotranspiration and discharge. For the time period 1996-2001, meteorological time series were obtained from four meteorological stations and five additional precipitation stations. Measured daily discharge rates were available from two gauges located in the catchment. In the different land cover data sets, the proportions of arable land ranged from 52.7% to 61.7% of the catchment area and for forests from 19.5% to 24.6%. These different proportions showed only minor impacts with small differences below ±10 mm y⁻¹ on the simulated annual rates of evapotranspiration and ground water recharge. In contrast, the simulated surface runoff rates showed a strong correlation to the amount of the settlement areas in the catchment. The highest proportion of settlements with 4.9% of the catchment area in comparison to the lowest proportion of 2.9% leads to an increase in the simulated surface runoff of 70%.     

Influence of oyster culture practices and environmental conditions on the ecological status of intertidal mudflats in the Pertuis Charentais (SW France): a multi-index approach

The ecological quality status (EcoQ) of intertidal mudflats constrained by Pacific oyster farming was assessed by single (H’, AMBI, BENTIX and BOPA) and multimetric (M-AMBI and average score) index approaches in the Pertuis Charentais (SW France). Fifteen sampling stations were monitored seasonally for sedimentological features and macrozoobenthos in 2004. Sediments affected by oyster biodeposits showed organic matter enrichment, and sediments from off-bottom culture sites had higher organic matter contents and lower redox potentials than sediments from on-bottom culture sites. Biotic indices consistently registered responses of macrozoobenthos to organic enrichment but there was only partial agreement between single index-derived EcoQs. The average score was better than M-AMBI and single indices for determining EcoQs. Accordingly, oyster farming alters intertidal macrozoobenthic assemblages moderately, and off-bottom cultures cause more disturbance than on-bottom cultures. Hydrodynamics and seasons may interact with culture practices in smothering/strengthening biodeposition-mediated effects through dispersal/accumulation of biodeposits.     

An insight into the performance of benthic classification indices tested in Eastern Mediterranean coastal waters

This work evaluates four indices that have been used for benthic macroinvertebrate ecological quality classification in the Mediterranean Sea. Our study was based on the data obtained from the participation of Greece and Cyprus in the Mediterranean Geographical Intercalibration group. The indices AMBI, M-AMBI, MEDOCC and BENTIX were applied to the available benthic species data, and the succession of the ecological groups along the graded values of each index was plotted. The level of agreement among methods was calculated, and the performance of each method in estimating ecological quality status was evaluated. AMBI, based on the Atlantic model, and its derivative M-AMBI overestimated the statuses, while MEDOCC showed the best level of agreement with BENTIX. BENTIX gives equal weight to tolerant and opportunistic species groups, which correlates them more closely than the other indices and makes BENTIX the most sensitive in detecting ecological disturbances in the Eastern Mediterranean basin, where tolerant and opportunistic groups seem to play an equally important role in the response of benthic communities to stressors.     

Effects of age, sex and reproductive status on persistent organic pollutant concentrations in “Southern Resident” killer whales

“Southern Resident” killer whales (Orcinus orca) that comprise three fish-eating “pods” (J, K and L) were listed as “endangered” in the US and Canada following a 20% population decline between 1996 and 2001. Blubber biopsy samples from Southern Resident juveniles had statistically higher concentrations of certain persistent organic pollutants than were found for adults. Most Southern Resident killer whales, including the four juveniles, exceeded the health-effects threshold for total PCBs in marine mammal blubber. Maternal transfer of contaminants to the juveniles during rapid development of their biological systems may put these young whales at greater risk than adults for adverse health effects (e.g., immune and endocrine system dysfunction). Pollutant ratios and field observations established that two of the pods (K- and L-pod) travel to California to forage. Nitrogen stable isotope values, supported by field observations, indicated possible changes in the diet of L-pod over the last decade.     

Towards the application of the Water Framework Directive in Italy: Assessing the potential of benthic tools in Adriatic coastal transitional ecosystems

The potential of four benthic indices (AMBI/M-AMBI, BENTIX, BITS) was assessed in Italian coastal transitional ecosystems. The community composition showed a strong dominance of lagoonal, tolerant species, and out of more of 400 species found, only about 40 taxa were dominant. The full agreement of the four indices on an undegraded (Good or better) or degraded (Moderate or worse) status occurred only in 32.3% of stations. This study evidenced that BENTIX is inappropriate for eutrophic Adriatic lagoons, and that in such environments M-AMBI classification is actually too much dependent on diversity and richness, and seems unable to capture some peculiarities of benthic assemblages in transitional waters. AMBI and BITS gave similar classifications despite the different level of taxonomic identification needed. The unmodified use of these indices might impair accurate assessment of ecological quality status and decision-making on the managers’ point of view.     

Using historical data, expert judgement and multivariate analysis in assessing reference conditions and benthic ecological status, according to the European Water Framework Directive

The European Water Framework Directive (WFD) establishes a framework for the protection and improvement of estuarine and coastal waters, trying to achieve 'good surface water status at the latest 15 years after the date of entry into force of this Directive'. One of the biological elements that should be analysed is the benthos and, as such, the WFD normative definitions describe the aspects of the benthic communities that must be included in the ecological status assessment of a water body. Therefore, it is essential to include, in the assessment, the different metrics that address those parameters identified in the normative definitions for each of the ecological status classes. In this contribution the use of the AMBI, richness and diversity, combined with the use, in a further development, of factor analysis together with discriminant analysis, is presented as an objective tool (named here M-AMBI) in assessing ecological quality status. This assessment requires previous classification of water bodies and typologies, together with the definition of reference conditions; this is undertaken in this contribution using historical data, expert judgement and multivariate analysis. The study has been undertaken by examining changes in benthic communities in the Basque Country, over the last decade, as a case-study, to demonstrate the accuracy and potential of these methodologies.