Predicting grain protein content of winter wheat using remote sensing data based on nitrogen status and water stress

Advanced site-specific knowledge of grain protein content of winter wheat from remote sensing data would provide opportunities to manage grain harvest differently, and to maximize output by adjusting input in fields. In this study, remote sensing data were utilized to predict grain protein content. Firstly, the leaf nitrogen content at winter wheat anthesis stage was proved to be significantly correlated with grain protein content (R² = 0.36), and spectral indices significantly correlated to leaf nitrogen content at anthesis stage were potential indicators for grain protein content. The vegetation index, VI_green, derived from the canopy spectral reflectance at green and red bands, was significantly correlated to the leaf nitrogen content at anthesis stage, and also highly significantly correlated to the final grain protein content (R² = 0.46). Secondly, the external conditions, such as irrigation, fertilization and temperature, had important influence on grain quality. Water stress at grain filling stage can increase grain protein content, and leaf water content is closely related to irrigation levels, therefore, the spectral indices correlated to leaf water content can be potential indicators for grain protein content. The spectral reflectance of TM channel 5 derived from canopy spectra or image data at grain filling stage was all significantly correlated to grain protein content (R² = 0.31 and 0.37, respectively). Finally, not only this study proved the feasibility of using remote sensing data to predict grain protein content, but it also provided a tentative prediction of the grain protein content in Beijing area using the reflectance image of TM channel 5.     

Assessing the impact of hydrocarbon leakages on vegetation using reflectance spectroscopy

This paper assesses the capability of hyperspectral remote sensing to detect hydrocarbon leakages in pipelines using vegetation status as an indicator of contamination. A field experiment in real scale and in tropical weather was conducted in which Brachiaria brizantha H.S. pasture plants were grown over soils contaminated with small volumes of liquid hydrocarbons (HCs). The contaminations involved volumes of hydrocarbons that ranged between 2 L and 12.7 L of gasoline and diesel per m³ of soil, which were applied to the crop parcels over the course of 30 days. The leaf and canopy reflectance spectra of contaminated and control plants were acquired within 350–2500 nm wavelengths. The leaf and canopy reflectance spectra were mathematically transformed by means of first derivative (FD) and continuum removal (CR) techniques. Using principal component analysis (PCA), the spectral measurements could be grouped into either two or three contamination groups. Wavelengths in the red edge were found to contain the largest spectral differences between plants at distinct, evolving contamination stages. Wavelengths centred on water absorption bands were also important to differentiating contaminated from healthy plants. The red edge position of contaminated plants, calculated on the basis of FD spectra, shifted substantially to shorter wavelengths with increasing contamination, whereas non-contaminated plants displayed a red shift (in leaf spectra) or small blue shift (in canopy spectra). At leaf scale, contaminated plants were differentiated from healthy plants between 550–750 nm, 1380–1550 nm, 1850–2000 nm and 2006–2196 nm. At canopy scale, differences were substantial between 470–518 nm, 550–750 nm, 910–1081 nm, 1116–1284 nm, 1736–1786 nm, 2006–2196 nm and 2222–2378 nm. The results of this study suggests that remote sensing of B. brizantha H.S. at both leaf and canopy scales can be used as an indicator of gasoline and diesel contaminations for the detection of small leakages in pipelines.     

Modelling the spectral response of the desert tree Prosopis tamarugo to water stress

In this paper, we carried out a laboratory experiment to study changes in canopy reflectance of Tamarugo plants under controlled water stress. Tamarugo (Prosopis tamarugo Phil.) is an endemic and endangered tree species adapted to the hyper-arid conditions of the Atacama Desert, Northern Chile. Observed variation in reflectance during the day (due to leaf movements) as well as changes over the experimental period (due to water stress) were successfully modelled by using the Soil-Leaf-Canopy (SLC) radiative transfer model. Empirical canopy reflectance changes were mostly explained by the parameters leaf area index (LAI), leaf inclination distribution function (LIDF) and equivalent water thickness (EWT) as shown by the SLC simulations. Diurnal leaf movements observed in Tamarugo plants (as adaptation to decrease direct solar irradiation at the hottest time of the day) had an important effect on canopy reflectance and were explained by the LIDF parameter. The results suggest that remote sensing based assessment of this desert tree should consider LAI and canopy water content (CWC) as water stress indicators. Consequently, we tested fifteen different vegetation indices and spectral absorption features proposed in literature for detecting changes of LAI and CWC, considering the effect of LIDF variations. A sensitivity analysis was carried out using SLC simulations with a broad range of LAI, LIDF and EWT values. The Water Index was the most sensitive remote sensing feature for estimating CWC for values less than 0.036 g/cm², while the area under the curve for the spectral range 910–1070 nm was most sensitive for values higher than 0.036 g/cm². The red-edge chlorophyll index (CI_red-edge) performed the best for estimating LAI. Diurnal leaf movements had an effect on all remote sensing features tested, particularly on those for detecting changes in CWC.     

Modeling soil parameters using hyperspectral image reflectance in subtropical coastal wetlands

Developing spectral models of soil properties is an important frontier in remote sensing and soil science. Several studies have focused on modeling soil properties such as total pools of soil organic matter and carbon in bare soils. We extended this effort to model soil parameters in areas densely covered with coastal vegetation. Moreover, we investigated soil properties indicative of soil functions such as nutrient and organic matter turnover and storage. These properties include the partitioning of mineral and organic soil between particulate (>53 μm) and fine size classes, and the partitioning of soil carbon and nitrogen pools between stable and labile fractions. Soil samples were obtained from Avicennia germinans mangrove forest and Juncus roemerianus salt marsh plots on the west coast of central Florida. Spectra corresponding to field plot locations from Hyperion hyperspectral image were extracted and analyzed. The spectral information was regressed against the soil variables to determine the best single bands and optimal band combinations for the simple ratio (SR) and normalized difference index (NDI) indices. The regression analysis yielded levels of correlation for soil variables with R² values ranging from 0.21 to 0.47 for best individual bands, 0.28 to 0.81 for two-band indices, and 0.53 to 0.96 for partial least-squares (PLS) regressions for the Hyperion image data. Spectral models using Hyperion data adequately (RPD > 1.4) predicted particulate organic matter (POM), silt + clay, labile carbon (C), and labile nitrogen (N) (where RPD = ratio of standard deviation to root mean square error of cross-validation [RMSECV]). The SR (0.53 μm, 2.11 μm) model of labile N with R² = 0.81, RMSECV= 0.28, and RPD = 1.94 produced the best results in this study. Our results provide optimism that remote-sensing spectral models can successfully predict soil properties indicative of ecosystem nutrient and organic matter turnover and storage, and do so in areas with dense canopy cover.     

Uncertainty analysis of remote sensing of colored dissolved organic matter: Evaluations and comparisons for three rivers in North America

The uncertainties involved in remote sensing inversion of CDOM (Colored Dissolved Organic Matter) were analyzed in estuarine and coastal regions of three North American rivers: Mississippi, Hudson, and Neponset. Water optical and biogeochemical properties, including CDOM absorption and above-surface spectra, were collected in very high resolution. CDOM’s concentrations (a_g(440), absorption coefficient at 440 nm) were inverted from EO-1 Hyperion images, using a quasi-analytical algorithm for CDOM (QAA-CDOM). Uncertainties are classified to five levels, in which the underwater measurement uncertainty (level 1), image preprocessing uncertainty (level 4) and inverse model uncertainty (level 5) were evaluated. Results indicate that at level 1, in situ CDOM measurement is significant with 0.1 in the unit of QSU and 0.01 in the unit of a_g(440) (m⁻¹). At level 4, surface wave is a potential uncertainty source for high-resolution images in estuarine and coastal regions. The remote sensing reflectance of wavy water is about 10 times of the truth. At level 5, the overall uncertainty of QAA-CDOM inversion is 0.006 m⁻¹, with accuracy R² = 0.77, k = 1.1 and RMSE_log = 0.33 m⁻¹. The correlations between uncertainties and other water properties indicate that the large uncertainty in some rivers, such as the Neponset and Atchafalaya, might be caused by high-concentration chlorophyll or sediments. The relationships among the three level uncertainties show that the level 1 uncertainty generally does not propagate into level 4 and 5, but the large uncertainty at level 4 usually introduce large uncertainty at level 5.     

Estimating dissolved organic carbon concentration in turbid coastal waters using optical remote sensing observations

Dissolved Organic Carbon (DOC) is an important component in the global carbon cycle. It also plays an important role in influencing the coastal ocean biogeochemical (BGC) cycles and light environment. Studies focussing on DOC dynamics in coastal waters are data constrained due to the high costs associated with in situ water sampling campaigns. Satellite optical remote sensing has the potential to provide continuous, cost-effective DOC estimates. In this study we used a bio-optics dataset collected in turbid coastal waters of Moreton Bay (MB), Australia, during 2011 to develop a remote sensing algorithm to estimate DOC. This dataset includes data from flood and non-flood conditions. In MB, DOC concentration varied over a wide range (20–520 μM C) and had a good correlation (R² = 0.78) with absorption due to coloured dissolved organic matter (CDOM) and remote sensing reflectance. Using this data set we developed an empirical algorithm to derive DOC concentrations from the ratio of R_rs(412)/R_rs(488) and tested it with independent datasets. In this study, we demonstrate the ability to estimate DOC using remotely sensed optical observations in turbid coastal waters.     

Modelling high arctic percent vegetation cover using field digital images and high resolution satellite data

In this study, digital images collected at a study site in the Canadian High Arctic were processed and classified to examine the spatial-temporal patterns of percent vegetation cover (PVC). To obtain the PVC of different plant functional groups (i.e., forbs, graminoids/sedges and mosses), field near infrared-green-blue (NGB) digital images were classified using an object-based image analysis (OBIA) approach. The PVC analyses comparing different vegetation types confirmed: (i) the polar semi-desert exhibited the lowest PVC with a large proportion of bare soil/rock cover; (ii) the mesic tundra cover consisted of approximately 60% mosses; and (iii) the wet sedge consisted almost exclusively of graminoids and sedges. As expected, the PVC and green normalized difference vegetation index (GNDVI; (R_NIR − R_Green)/(R_NIR + R_Green)), derived from field NGB digital images, increased during the summer growing season for each vegetation type: i.e., ∼5% (0.01) for polar semi-desert; ∼10% (0.04) for mesic tundra; and ∼12% (0.03) for wet sedge respectively. PVC derived from field images was found to be strongly correlated with WorldView-2 derived normalized difference spectral indices (NDSI; (R_x − R_y)/(R_x + R_y)), where R_x is the reflectance of the red edge (724.1 nm) or near infrared (832.9 nm and 949.3 nm) bands; R_y is the reflectance of the yellow (607.7 nm) or red (658.8 nm) bands with R²’s ranging from 0.74 to 0.81. NDSIs that incorporated the yellow band (607.7 nm) performed slightly better than the NDSIs without, indicating that this band may be more useful for investigating Arctic vegetation that often includes large proportions of senescent vegetation throughout the growing season.     

Non-linear partial least square regression increases the estimation accuracy of grass nitrogen and phosphorus using in situ hyperspectral and environmental data

Grass nitrogen (N) and phosphorus (P) concentrations are direct indicators of rangeland quality and provide imperative information for sound management of wildlife and livestock. It is challenging to estimate grass N and P concentrations using remote sensing in the savanna ecosystems. These areas are diverse and heterogeneous in soil and plant moisture, soil nutrients, grazing pressures, and human activities. The objective of the study is to test the performance of non-linear partial least squares regression (PLSR) for predicting grass N and P concentrations through integrating in situ hyperspectral remote sensing and environmental variables (climatic, edaphic and topographic). Data were collected along a land use gradient in the greater Kruger National Park region. The data consisted of: (i) in situ-measured hyperspectral spectra, (ii) environmental variables and measured grass N and P concentrations. The hyperspectral variables included published starch, N and protein spectral absorption features, red edge position, narrow-band indices such as simple ratio (SR) and normalized difference vegetation index (NDVI). The results of the non-linear PLSR were compared to those of conventional linear PLSR. Using non-linear PLSR, integrating in situ hyperspectral and environmental variables yielded the highest grass N and P estimation accuracy (R² = 0.81, root mean square error (RMSE) = 0.08, and R² = 0.80, RMSE = 0.03, respectively) as compared to using remote sensing variables only, and conventional PLSR. The study demonstrates the importance of an integrated modeling approach for estimating grass quality which is a crucial effort towards effective management and planning of protected and communal savanna ecosystems.     

Upscaling plot-scale soil respiration in winter wheat and summer maize rotation croplands in Julu County,North China

Soil respiration (R_s) data from 45 plots were used to estimate the spatial patterns of R_s during the peak growing seasons of winter wheat and summer maize in Julu County, North China, by combining satellite remote sensing data, field-measured data, and a support vector regression (SVR) model. The observed R_s values were well reproduced by the model at the plot scale, with a root-mean-square error (RMSE) of 0.31 μmol CO₂ m⁻² s⁻¹ and a coefficient of determination (R²) of 0.73. No significant difference was detected between the prediction accuracy of the SVR model for winter wheat and summer maize. With forcing from satellite remote sensing data and gridded soil property data, we used the SVR model to predict the spatial distributions of R_s during the peak growing seasons of winter wheat and summer maize rotation croplands in Julu County. The SVR model captured the spatial variations of R_s at the county scale. The satellite-derived enhanced vegetation index was found to be the most important input used to predict R_s. Removal of this variable caused an RMSE increase from 0.31 μmol CO₂ m⁻² s⁻¹ to 0.42 μmol CO₂ m⁻² s⁻¹. Soil properties such as soil organic carbon (SOC) content and soil bulk density (SBD) were the second most important factors. Their removal led to an RMSE increase from 0.31 μmol CO₂ m⁻² s⁻¹ to 0.37 μmol CO₂ m⁻² s⁻¹. The SVR model performed better than multiple regression in predicting spatial variations of R_s in winter wheat and summer maize rotation croplands, as shown by the comparison of the R² and RMSE values of the two algorithms. The spatial patterns of R_s are better captured using the SVR model than performing multiple regression, particularly for the relatively high and relatively low R_s values at the center and northeast study areas. Therefore, SVR shows promise for predicting spatial variations of R_s values on the basis of remotely sensed data and gridded soil property data at the county scale.     

Temperature and emissivity separation and mineral mapping based on airborne TASI hyperspectral thermal infrared data

Thermal infrared remote sensing (8–12 μm) (TIR) has great potential for geologic remote sensing studies. TIR has been successfully used for terrestrial and planetary geologic studies to map surface materials. However, the complexity of the physics and the lack of hyperspectral data make the studies under-investigated. A new generation of commercial hyperspectral infrared sensors, known as Thermal Airborne Spectrographic Imager (TASI), was used for image analysis and mineral mapping in this study. In this paper, a combined method integrating normalized emissivity method (NEM), ratio algorithm (RATIO) and maximum–minimum apparent emissivity difference (MMD), being applied in multispectral data, has been modified and used to determine whether this method is suitable for retrieving emissivity from TASI hyperspectral data. MODTRAN 4 has been used for the atmospheric correction. The retrieved emissivity spectra matched well with the field measured spectra except for bands 1, 2, and 32. Quartz, calcite, diopside/hedenbergite, hornblende and microcline have been mapped by the emissivity image. Mineral mapping results agree with the dominant minerals identified by laboratory X-ray powder diffraction and spectroscopic analyses of field samples. Both of the results indicated that the atmospheric correction method and the combined temperature–emissivitiy method are suitable for TASI image. Carbonate skarnization was first found in the study area by the spatial extent of diopside. Chemical analyses of the skarn samples determined that the Au content was 0.32–1.74 g/t, with an average Au content of 0.73 g/t. This information provides an important resource for prospecting for skarn type gold deposits. It is also suggested that TASI is suitable for prospect and deposit scale exploration.     

Remote estimation of nitrogen and chlorophyll contents in maize at leaf and canopy levels

Leaf and canopy nitrogen (N) status relates strongly to leaf and canopy chlorophyll (Chl) content. Remote sensing is a tool that has the potential to assess N content at leaf, plant, field, regional and global scales. In this study, remote sensing techniques were applied to estimate N and Chl contents of irrigated maize (Zea mays L.) fertilized at five N rates. Leaf N and Chl contents were determined using the red-edge chlorophyll index with R² of 0.74 and 0.94, respectively. Results showed that at the canopy level, Chl and N contents can be accurately retrieved using green and red-edge Chl indices using near infrared (780–800 nm) and either green (540–560 nm) or red-edge (730–750 nm) spectral bands. Spectral bands that were found optimal for Chl and N estimations coincide well with the red-edge band of the MSI sensor onboard the near future Sentinel-2 satellite. The coefficient of determination for the relationships between the red-edge chlorophyll index, simulated in Sentinel-2 bands, and Chl and N content was 0.90 and 0.87, respectively.     

Very high spatial resolution optical and radar imagery in tracking water level fluctuations of a small inland reservoir

Tracking water level fluctuations in small lakes and reservoirs is important in order to better understand and manage these ecosystems. A geographic object-based image analysis (GEOBIA) method using very high spatial and temporal resolution optical (Pléiades) and radar (COSMO-SkyMed and TerraSAR-X) remote sensing imagery is presented here which (1) tracks water level fluctuations via variations in water surface area and (2) avoids common difficulties found in using single-band radar images for water-land image classification. Results are robust, with over 98% of image surface area correctly classified into land or water, R² = 0.963 and RMSE = 0.42 m for a total water level fluctuation range of 5.94 m. Multispectral optical imagery is found to be more straightforward in producing results than single-band radar imagery, but the latter crucially increase temporal resolution to the point where fluctuations can be satisfactorily tracked in time. Moreover, an analysis suggests that high and medium spatial resolution imagery is sufficient, in at least some cases, in tracking the water level fluctuations of small inland reservoirs. Finally, limitations of the methodology presented here are briefly discussed along with potential solutions to overcome them.     

A visible band index for remote sensing leaf chlorophyll content at the canopy scale

Leaf chlorophyll content is an important variable for agricultural remote sensing because of its close relationship to leaf nitrogen content. The triangular greenness index (TGI) was developed based on the area of a triangle surrounding the spectral features of chlorophyll with points at (670 nm, R₆₇₀), (550 nm, R₅₅₀), and (480 nm, R₄₈₀), where R_λ is the spectral reflectance at wavelengths of 670, 550 and 480, respectively. The equation is TGI = −0.5[(670 − 480)(R₆₇₀ − R₅₅₀) − (670 − 550)(R₆₇₀ − R₄₈₀)]. In 1999, investigators funded by NASA's Earth Observations Commercialization and Applications Program collaborated on a nitrogen fertilization experiment with irrigated maize in Nebraska. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and Landsat 5 Thematic Mapper (TM) data were acquired along with leaf chlorophyll meter and other data on three dates in July during late vegetative growth and early reproductive growth. TGI was consistently correlated with plot-averaged chlorophyll-meter values at the spectral resolutions of AVIRIS, Landsat TM, and digital cameras. Simulations using the Scattering by Arbitrarily Inclined Leaves (SAIL) canopy model indicate an interaction among TGI, leaf area index (LAI) and soil type at low crop LAI, whereas at high LAI and canopy closure, TGI was only affected by leaf chlorophyll content. Therefore, TGI may be the best spectral index to detect crop nitrogen requirements with low-cost digital cameras mounted on low-altitude airborne platforms.     

Estimating winter wheat biomass by assimilating leaf area index derived from fusion of Landsat-8 and MODIS data

A sufficient number of satellite acquisitions in a growing season are essential for deriving agronomic indicators, such as green leaf area index (GLAI), to be assimilated into crop models for crop productivity estimation. However, for most high resolution orbital optical satellites, it is often difficult to obtain images frequently due to their long revisit cycles and unfavorable weather conditions. Data fusion algorithms, such as the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) and the Enhanced STARFM (ESTARFM), have been developed to generate synthetic data with high spatial and temporal resolution to address this issue. In this study, we evaluated the approach of assimilating GLAI into the Simple Algorithm for Yield Estimation model (SAFY) for winter wheat biomass estimation. GLAI was estimated using the two-band Enhanced Vegetation Index (EVI2) derived from data acquired by the Operational Land Imager (OLI) onboard the Landsat-8 and a fusion dataset generated by blending the Moderate-Resolution Imaging Spectroradiometer (MODIS) data and the OLI data using the STARFM and ESTARFM models. The fusion dataset had the temporal resolution of the MODIS data and the spatial resolution of the OLI data. Key parameters of the SAFY model were optimised through assimilation of the estimated GLAI into the crop model using the Shuffled Complex Evolution-University of Arizona (SCE-UA) algorithm. A good agreement was achieved between the estimated and field measured biomass by assimilating the GLAI derived from the OLI data (GLAI_L) alone (R² = 0.77 and RMSE = 231 g m⁻²). Assimilation of GLAI derived from the fusion dataset (GLAI_F) resulted in a R² of 0.71 and RMSE of 193 g m⁻² while assimilating the combination of GLAI_L and GLAI_F led to further improvements (R² = 0.76 and RMSE = 176 g m⁻²). Our results demonstrated the potential of using the fusion algorithms to improve crop growth monitoring and crop productivity estimation when the number of high resolution remote sensing data acquisitions is limited.     

Retrieval of leaf water content spanning the visible to thermal infrared spectra

The objective of this study was to investigate the entire spectra (from visible to the thermal infrared; 0.390–14.0 μm) to retrieve leaf water content in a consistent manner. Narrow-band spectral indices (calculated from all possible two band combinations) and a partial least square regression (PLSR) were used to assess the strength of each spectral region. The coefficient of determination (R²) and root mean square error (RMSE) were used to report the prediction accuracy of spectral indices and PLSR models. In the visible-near infrared and shortwave infrared (VNIR–SWIR), the most accurate spectral index yielded R² of 0.89 and RMSE of 7.60%, whereas in the mid infrared (MIR) the highest R² was 0.93 and RMSE of 5.97%. Leaf water content was poorly predicted using two-band indices developed from the thermal infrared (R² = 0.33). The most accurate PLSR model resulted from MIR reflectance spectra (R² = 0.96, RMSE = 4.74% and RMSE cross validation RMSE_CV = 6.17%) followed by VNIR–SWIR reflectance spectra (R² = 0.91, RMSE = 6.90% and RMSE_CV = 7.32%). Using thermal infrared (TIR) spectra, the PLSR model yielded a moderate retrieval accuracy (R² = 0.67, RMSE = 13.27% and RMSE_CV = 16.39%). This study demonstrated that the mid infrared (MIR) and shortwave infrared (SWIR) domains were the most sensitive spectral region for the retrieval of leaf water content.     

Remote quantification of phycocyanin in potable water sources through an adaptive model

Cyanobacterial blooms in water supply sources in both central Indiana USA (CIN) and South Australia (SA) are a cause of great concerns for toxin production and water quality deterioration. Remote sensing provides an effective approach for quick assessment of cyanobacteria through quantification of phycocyanin (PC) concentration. In total, 363 samples spanning a large variation of optically active constituents (OACs) in CIN and SA waters were collected during 24 field surveys. Concurrently, remote sensing reflectance spectra (R_rs) were measured. A partial least squares–artificial neural network (PLS–ANN) model, artificial neural network (ANN) and three-band model (TBM) were developed or tuned by relating the R_rs with PC concentration. Our results indicate that the PLS–ANN model outperformed the ANN and TBM with both the original spectra and simulated ESA/Sentinel-3/Ocean and Land Color Instrument (OLCI) and EO-1/Hyperion spectra. The PLS–ANN model resulted in a high coefficient of determination (R²) for CIN dataset (R² = 0.92, R: 0.3–220.7 μg/L) and SA (R² = 0.98, R: 0.2–13.2 μg/L). In comparison, the TBM model yielded an R² = 0.77 and 0.94 for the CIN and SA datasets, respectively; while the ANN obtained an intermediate modeling accuracy (CIN: R² = 0.86; SA: R² = 0.95). Applying the simulated OLCI and Hyperion aggregated datasets, the PLS–ANN model still achieved good performance (OLCI: R² = 0.84; Hyperion: R² = 0.90); the TBM also presented acceptable performance for PC estimations (OLCI: R² = 0.65, Hyperion: R² = 0.70). Based on the results, the PLS–ANN is an effective modeling approach for the quantification of PC in productive water supplies based on its effectiveness in solving the non-linearity of PC with other OACs. Furthermore, our investigation indicates that the ratio of inorganic suspended matter (ISM) to PC concentration has close relationship to modeling relative errors (CIN: R² = 0.81; SA: R² = 0.92), indicating that ISM concentration exert significant impact on PC estimation accuracy.     

Assessing the utility WorldView-2 imagery for tree species mapping in South African subtropical humid forest and the conservation implications: Dukuduku forest patch as case study

Indigenous forest biome in South Africa is highly fragmented into patches of various sizes (most patches < 1 km²). The utilization of timber and non-timber resources by poor rural communities living around protected forest patches produce subtle changes in the forest canopy which can be hardly detected on a timely manner using traditional field surveys. The aims of this study were to assess: (i) the utility of very high resolution (VHR) remote sensing imagery (WorldView-2, 0.5–2 m spatial resolution) for mapping tree species and canopy gaps in one of the protected subtropical coastal forests in South Africa (the Dukuduku forest patch (ca.3200 ha) located in the province of KwaZulu-Natal) and (ii) the implications of the map products to forest conservation. Three dominant canopy tree species namely, Albizia adianthifolia, Strychnos spp. and Acacia spp., and canopy gap types including bushes (grass/shrubby), bare soil and burnt patches were accurately mapped (overall accuracy = 89.3 ± 2.1%) using WorldView-2 image and support vector machine classifier. The maps revealed subtle forest disturbances such as bush encroachment and edge effects resulting from forest fragmentation by roads and a power-line. In two stakeholders’ workshops organised to assess the implications of the map products to conservation, participants generally agreed amongst others implications that the VHR maps provide valuable information that could be used for implementing and monitoring the effects of rehabilitation measures. The use of VHR imagery is recommended for timely inventorying and monitoring of the small and fragile patches of subtropical forests in Southern Africa.     

Comparison of UAV and WorldView-2 imagery for mapping leaf area index of mangrove forest

Unmanned Aerial Vehicle (UAV) remote sensing has opened the door to new sources of data to effectively characterize vegetation metrics at very high spatial resolution and at flexible revisit frequencies. Successful estimation of the leaf area index (LAI) in precision agriculture with a UAV image has been reported in several studies. However, in most forests, the challenges associated with the interference from a complex background and a variety of vegetation species have hindered research using UAV images. To the best of our knowledge, very few studies have mapped the forest LAI with a UAV image. In addition, the drawbacks and advantages of estimating the forest LAI with UAV and satellite images at high spatial resolution remain a knowledge gap in existing literature. Therefore, this paper aims to map LAI in a mangrove forest with a complex background and a variety of vegetation species using a UAV image and compare it with a WorldView-2 image (WV2).In this study, three representative NDVIs, average NDVI (AvNDVI), vegetated specific NDVI (VsNDVI), and scaled NDVI (ScNDVI), were acquired with UAV and WV2 to predict the plot level (10 × 10 m) LAI. The results showed that AvNDVI achieved the highest accuracy for WV2 (R² = 0.778, RMSE = 0.424), whereas ScNDVI obtained the optimal accuracy for UAV (R² = 0.817, RMSE = 0.423). In addition, an overall comparison results of the WV2 and UAV derived LAIs indicated that UAV obtained a better accuracy than WV2 in the plots that were covered with homogeneous mangrove species or in the low LAI plots, which was because UAV can effectively eliminate the influence from the background and the vegetation species owing to its high spatial resolution. However, WV2 obtained a slightly higher accuracy than UAV in the plots covered with a variety of mangrove species, which was because the UAV sensor provides a negative spectral response function(SRF) than WV2 in terms of the mangrove LAI estimation.     

Hyperspectral-based predictive modelling of grapevine water status in the Portuguese Douro wine region

In this study, hyperspectral reflectance (HySR) data derived from a handheld spectroradiometer were used to assess the water status of three grapevine cultivars in two sub-regions of Douro wine region during two consecutive years. A large set of potential predictors derived from the HySR data were considered for modelling/predicting the predawn leaf water potential (Ψ_pd) through different statistical and machine learning techniques. Three HySR vegetation indices were selected as final predictors for the computation of the models and the in-season time trend was removed from data by using a time predictor. The vegetation indices selected were the Normalized Reflectance Index for the wavelengths 554 nm and 561 nm (NRI_554;561), the water index (WI) for the wavelengths 900 nm and 970 nm, and the D1 index which is associated with the rate of reflectance increase in the wavelengths of 706 nm and 730 nm. These vegetation indices covered the green, red edge and the near infrared domains of the electromagnetic spectrum. A large set of state-of-the-art analysis and statistical and machine-learning modelling techniques were tested. Predictive modelling techniques based on generalized boosted model (GBM), bagged multivariate adaptive regression splines (B-MARS), generalized additive model (GAM), and Bayesian regularized neural networks (BRNN) showed the best performance for predicting Ψ_pd, with an average determination coefficient (R²) ranging between 0.78 and 0.80 and RMSE varying between 0.11 and 0.12 MPa. When cultivar Touriga Nacional was used for training the models and the cultivars Touriga Franca and Tinta Barroca for testing (independent validation), the models performance was good, particularly for GBM (R² = 0.85; RMSE = 0.09 MPa). Additionally, the comparison of Ψ_pd observed and predicted showed an equitable dispersion of data from the various cultivars. The results achieved show a good potential of these predictive models based on vegetation indices to support irrigation scheduling in vineyard.     

Soil respiration mapped by exclusively use of MODIS data for forest landscapes of Saskatchewan,Canada

Soil respiration (R_s) is of great importance to the global carbon balance. Remote sensing of R_s is challenging because of (1) the lack of long-term R_s data for model development and (2) limited knowledge of using satellite-based products to estimate R_s. Using 8-years (2002–2009) of continuous R_s measurements with nonsteady-state automated chamber systems at a Canadian boreal black spruce stand (SK-OBS), we found that R_s was strongly correlated with the product of the normalized difference vegetation index (NDVI) and the nighttime land surface temperature (LSTn) derived from Moderate Resolution Imaging Spectroradiometer (MODIS) imagery. The coefficients of the linear regression equation of this correlation between R_s and NDVI × LSTn could be further calibrated using the MODIS leaf area index (LAI) product, resulting in an algorithm that is driven solely by remote sensing observations. Modeled R_s closely tracked the seasonal patterns of measured R_s and explained 74–92% of the variance in R_s with a root mean square error (RMSE) less than 1.0 g C/m²/d. Further validation of the model from SK-OBS site at another two independent sites (SK-OA and SK-OJP, old aspen and old jack pine, respectively) showed that the algorithm can produce good estimates of R_s with an overall R² of 0.78 (p < 0.001) for data of these two sites. Consequently, we mapped R_s of forest landscapes of Saskatchewan using entirely MODIS observations for 2003 and spatial and temporal patterns of R_s were well modeled. These results point to a strong relationship between the soil respiratory process and canopy photosynthesis as indicated from the greenness index (i.e., NDVI), thereby implying the potential of remote sensing data for detecting variations in R_s. A combination of both biological and environmental variables estimated from remote sensing in this analysis may be valuable in future investigations of spatial and temporal characteristics of R_s.