Comparison of daily and sub-daily SWAT models for daily streamflow simulation in the Upper Huai River Basin of China

Despite the significant role of precipitation in the hydrological cycle, few studies have been conducted to evaluate the impacts of the temporal resolution of rainfall inputs on the performance of SWAT (soil and water assessment tool) models in large-sized river basins. In this study, both daily and hourly rainfall observations at 28 rainfall stations were used as inputs to SWAT for daily streamflow simulation in the Upper Huai River Basin. Study results have demonstrated that the SWAT model with hourly rainfall inputs performed better than the model with daily rainfall inputs in daily streamflow simulation, primarily due to its better capability of simulating peak flows during the flood season. The sub-daily SWAT model estimated that 58 % of streamflow was contributed by baseflow compared to 34 % estimated by the daily model. Using the future daily and 3-h precipitation projections under the RCP (Representative Concentration Pathways) 4.5 scenario as inputs, the sub-daily SWAT model predicted a larger amount of monthly maximum daily flow during the wet years than the daily model. The differences between the daily and sub-daily SWAT model simulation results indicated that temporal rainfall resolution could have much impact on the simulation of hydrological process, streamflow, and consequently pollutant transport by SWAT models. There is an imperative need for more studies to examine the effects of temporal rainfall resolution on the simulation of hydrological and water pollutant transport processes by SWAT in river basins of different environmental conditions.     

Comparison of abstraction scenarios simulated by SWAT and SWAT-MODFLOW

In hydrological modelling of catchments, wherein streams are groundwater-fed, an accurate representation of groundwater processes and their interaction with surface water is crucial. With this purpose, a coupled model was recently developed linking SWAT (Soil and Water Assessment Tool) with the fully-distributed groundwater model MODFLOW (Modular Groundwater Flow). In this study, SWAT and SWAT-MODFLOW were applied to a Danish groundwater-dominant catchment, simulating groundwater abstraction scenarios and assessing the benefits and drawbacks of SWAT-MODFLOW. Both models demonstrated good performance. However, SWAT-MODFLOW provided more realistic outputs when simulating abstraction: the decrease in streamflow was similar to the volume of water abstracted, while in SWAT the impact was negligible. SWAT also showed impacts on streamflow only when abstractions were taken from the shallow aquifer, not from the deep aquifer. Overall, SWAT-MODFLOW demonstrated wider possibilities for groundwater analysis, providing more insights than SWAT in supporting decision making in relation to environmental assessment.     

Abiotic Stream Classification as a Basis for a Surveillance Monitoring Network in Austria in Accordance with the EU Water Framework Directive

This study presents the 26 major surface water types established in Austria in accordance with the draft of the EU Water Framework Directive (WFD). These types are made up of so‐called aquatic landscape units and large rivers. The 17 aquatic landscape units were defined using a database in which all Austrian running waters with a catchment area greater than 10 km^[2] were described according to the following typological features: size of catchment area, altitude of catchment area and confluences, stream order, geology, zoogeographical regions (ecoregions), and subregions. At running waters with gauges, a classification according to flow regimes was carried out. Large rivers were defined as running waters with a stream order ⩾7 and/or a catchment area > 2500 km² and/or with an average flow >50 m³/s. These major types represent, inter alia, the basis for the establishment of a surveillance monitoring network as required by the WFD.     

SWAT模型在斯里兰卡河流径流预测中的运用

本文运用SWAT模型和新安江模型对斯里兰卡卡鲁河流域上游地区日径流进行了预测.卡鲁河是斯里兰卡的第二大河,由于流域的降雨量很大,上游地区河流沿峡谷流下,中下游平原地区河床平坦.卡鲁河流域的洪水变的很正常.应用SWAT模型来对卡鲁河的日径流量进行预测,并同应用新安江模型所得到的结果做对比.研究表明,新安江模型要比SWAT (分布式水文模型)模型在卡鲁河日径流量预测上稍微好一些.实际上,或许数据质量不高或不恰当是部分原因,因为SWAT的输出成果严格取决于其输入的数据质量.此外,在斯里兰卡,许多人的日常用水是靠井水.当把流域看作一个整体,通常都是一个很大的范围,那样的话就不可能详尽的记录所有各个小规模的水利用,例如:小灌溉、小规模的家畜管理和工业水利用.这些水利用累积起来或许就很可观.这些数据的缺失对分布式水文模型在水平衡的应用有着独特的影响.但是概念水文模型(如新安江模型)可以根据实际情况在校正中调节它的参数,因为这些参数并没有实质的物理含义.因此,在流域特征和模型输入数据有限或不完整的情况下,概念水文模型比分布式水文模型更具优势.     

High‐frequency water quality monitoring in an urban catchment: hydrochemical dynamics,primary production and implications for the Water Framework Directive

This paper describes the hydrochemistry of a lowland, urbanised river‐system, The Cut in England, using in situ sub‐daily sampling. The Cut receives effluent discharges from four major sewage treatment works serving around 190 000 people. These discharges consist largely of treated water, originally abstracted from the River Thames and returned via the water supply network, substantially increasing the natural flow. The hourly water quality data were supplemented by weekly manual sampling with laboratory analysis to check the hourly data and measure further determinands. Mean phosphorus and nitrate concentrations were very high, breaching standards set by EU legislation. Although 56% of the catchment area is agricultural, the hydrochemical dynamics were significantly impacted by effluent discharges which accounted for approximately 50% of the annual P catchment input loads and, on average, 59% of river flow at the monitoring point. Diurnal dissolved oxygen data demonstrated high in‐stream productivity. From a comparison of high frequency and conventional monitoring data, it is inferred that much of the primary production was dominated by benthic algae, largely diatoms. Despite the high productivity and nutrient concentrations, the river water did not become anoxic, and major phytoplankton blooms were not observed. The strong diurnal and annual variation observed showed that assessments of water quality made under the Water Framework Directive (WFD) are sensitive to the time and season of sampling. It is recommended that specific sampling time windows be specified for each determinand, and that WFD targets should be applied in combination to help identify periods of greatest ecological risk. © 2015 The Authors. Hydrological Processes published by John Wiley & Sons Ltd.     

Effect of single and multi-site calibration techniques on hydrological model performance,parameter estimation and predictive uncertainty: a case study in the Logone catchment,Lake Chad basin

Understanding hydrological processes at catchment scale through the use of hydrological model parameters is essential for enhancing water resource management. Given the difficulty of using lump parameters to calibrate distributed catchment hydrological models in spatially heterogeneous catchments, a multiple calibration technique was adopted to enhance model calibration in this study. Different calibration techniques were used to calibrate the Soil and Water Assessment Tool (SWAT) model at different locations along the Logone river channel. These were: single-site calibration (SSC); sequential calibration (SC); and simultaneous multi-site calibration (SMSC). Results indicate that it is possible to reveal differences in hydrological behavior between the upstream and downstream parts of the catchment using different parameter values. Using all calibration techniques, model performance indicators were mostly above the minimum threshold of 0.60 and 0.65 for Nash Sutcliff Efficiency (NSE) and coefficient of determination (R ²) respectively, at both daily and monthly time-steps. Model uncertainty analysis showed that more than 60% of observed streamflow values were bracketed within the 95% prediction uncertainty (95PPU) band after calibration and validation. Furthermore, results indicated that the SC technique out-performed the other two methods (SSC and SMSC). It was also observed that although the SMSC technique uses streamflow data from all gauging stations during calibration and validation, thereby taking into account the catchment spatial variability, the choice of each calibration method will depend on the application and spatial scale of implementation of the modelling results in the catchment.     

Evaluating the SWAT's snow hydrology over a Northern Quebec watershed

The snow treatment becomes an important component of Soil and Water Assessment Tool (SWAT)’s hydrology when spring flows are dominated by snow melting. However, little is known about SWAT's snow hydrology performance because most studies using SWAT were conducted in rainfall‐driven catchments. To fill this gap, the present study aims to evaluate the ability of SWAT in simulating snow‐melting‐dominated streamflow in the Outardes Basin in Northern Quebec. SWAT performance in simulating snowmelt is evaluated against observed streamflow data and compared to simulations from the operationally used Streamflow Synthesis and Reservoir Regulation (SSARR) model over that catchment. The SWAT 5‐year calibration showed a satisfactory performance at the daily and seasonal time scales with low volume biases. The SWAT validation was conducted over two (17‐year and 15‐year) periods. Performances were similar to the calibration period in simulating the daily and seasonal streamflows again with low model biases. The spring‐snowmelt‐generated peak flow was accurately simulated by SWAT both in magnitude and timing. When SWAT's results are compared to SSARR, similar performances in simulating the daily discharges were observed. SSARR simulates more accurately streamflow generated at the snowmelt onset whereas SWAT better predicts streamflow in summer, fall and winter. SWAT provided reasonable streamflow simulations for our snow‐covered catchment, but refinement of the process‐driven baseflow during the snowmelt onset could improve spring performances. Therefore, SWAT becomes an attractive tool for evaluating water resources management in Nordic environments when a distributed model is preferred or when water quality information (e.g. temperature) is required. Copyright © 2013 John Wiley & Sons, Ltd.     

Climate models and hydrological parameter uncertainties in climate change impacts on monthly runoff and daily flow duration curve of a Mediterranean catchment

ABSTRACT

Climate models and hydrological parameter uncertainties were quantified and compared while assessing climate change impacts on monthly runoff and daily flow duration curve (FDC) in a Mediterranean catchment. Simulations of the Soil and Water Assessment Tool (SWAT) model using an ensemble of behavioural parameter sets derived from the Generalized Likelihood Uncertainty Estimation (GLUE) method were approximated by feed-forward artificial neural networks (FF-NN). Then, outputs of climate models were used as inputs to the FF-NN models. Subsequently, projected changes in runoff and FDC were calculated and their associated uncertainty was partitioned into climate model and hydrological parameter uncertainties. Runoff and daily discharge of the Chiba catchment were expected to decrease in response to drier and warmer climatic conditions in the 2050s. For both hydrological indicators, uncertainty magnitude increased when moving from dry to wet periods. The decomposition of uncertainty demonstrated that climate model uncertainty dominated hydrological parameter uncertainty in wet periods, whereas in dry periods hydrological parametric uncertainty became more important.

Editor M.C. Acreman; Associate editor S. Kanae     

Temporal analysis of Soil and Water Assessment Tool (SWAT) performance based on remotely sensed precipitation products

No study has systematically evaluated streamflow modelling between monthly and daily time scales. This study examines streamflow from seven watersheds across the USA where five different precipitation products were used as primary input into the Soil and Water Assessment Tool (SWAT) to generate simulated streamflow. Time scales examined include monthly, dekad (10 days), pentad (5 days), triad (3 days), and daily. The seven basins studied are the San Pedro (Arizona), Cimarron (north‐central Oklahoma), mid‐Nueces (south Texas), mid‐Rio Grande (south Texas and northern Mexico), Yocano (northern Mississippi), Alapaha (south Georgia), and mid‐St. Francis (eastern Arkansas). The precipitation products used to drive simulations include rain gauge, NWS Multisensor Precipitation Estimator, Tropical Rainfall Measurement Mission (TRMM), Multi‐Satellite Precipitation Analysis, TRMM 3B42‐V6, and Climate Prediction Center Morphing Method (CMORPH). Understanding how streamflow varies at sub‐monthly time scales is important because there are a host of hydrological applications such a flood forecast guidance and reservoir inflow forecasts that reside in a temporal domain between monthly and daily time scales. The major finding of this study is the quantification of a strong positive correlation between performance metrics and time step at which model performance deteriorates. Better performing simulations, with higher Nash–Sutcliffe values of 0.80 and above can support modeling at finer time scales to at least daily and perhaps beyond into the sub‐daily realm. These findings are significant in that they clearly document the ability of SWAT to support modeling at sub‐monthly time steps, which is beyond the capability for which SWAT was initially designed. Copyright © 2012 John Wiley & Sons, Ltd.     

A revisitation of TRIX for trophic status assessment in the light of the European Water Framework Directive: application to Italian coastal waters

The trophic status classification of coastal waters at the European scale requires the availability of harmonised indicators and procedures. The composite trophic status index (TRIX) provides useful metrics for the assessment of the trophic status of coastal waters. It was originally developed for Italian coastal waters and then applied in many European seas (Adriatic, Tyrrhenian, Baltic, Black and Northern seas). The TRIX index does not fulfil the classification procedure suggested by the WFD for two reasons: (a) it is based on an absolute trophic scale without any normalization to type-specific reference conditions; (b) it makes an ex ante aggregation of biological (Chl-a) and physico-chemical (oxygen, nutrients) quality elements, instead of an ex post integration of separate evaluations of biological and subsequent chemical quality elements. A revisitation of the TRIX index in the light of the European Water Framework Directive (WFD, 2000/60/EC) and new TRIX derived tools are presented in this paper. A number of Italian coastal sites were grouped into different types based on a thorough analysis of their hydro-morphological conditions, and type-specific reference sites were selected. Unscaled TRIX values (UNTRIX) for reference and impacted sites have been calculated and two alternative UNTRIX-based classification procedures are discussed. The proposed procedures, to be validated on a broader scale, provide users with simple tools that give an integrated view of nutrient enrichment and its effects on algal biomass (Chl-a) and on oxygen levels. This trophic evaluation along with phytoplankton indicator species and algal blooms contribute to the comprehensive assessment of phytoplankton, one of the biological quality elements in coastal waters.     

Assessment of runoff and sediment yield in the Miyun Reservoir catchment by using SWAT model

The Soil and Water Assessment Tool (SWAT) was used to simulate the transport of runoff and sediment into the Miyun Reservoir, Beijing in this study. The main objective was to validate the performance of SWAT and the feasibility of using this model as a simulator of runoff and sediment transport processes at a catchment scale in arid and semi‐arid area in North China, and related processes affecting water quantity and soil erosion in the catchment were simulated. The investigation was conducted using a 6‐year historical streamflow and sediment record from 1986 to 1991; the data from 1986 to 1988 was used for calibration and that from 1989 to 1991 for validation. The SWAT generally performs well and could accurately simulate both daily and monthly runoff and sediment yield. The simulated daily and monthly runoff matched the observed values satisfactorily, with a Nash‐Sutcliffe coefficient of greater than 0·6, 0·9 and a coefficient of determination 0·75, 0·9 at two outlet stations (Xiahui and Zhangjiafen stations) during calibration. These values were 0·6, 0·85 and 0·6, 0·9 during validation. For sediment simulation, the efficiency is lower than that for runoff. Even so, the Nash‐Sutcliffe coefficient and coefficient of determination were greater than 0·48 and 0·6 for monthly sediment yield during calibration, and these values were greater than 0·84 and 0·95 during validation. Sensitivity analysis shows that sensitive parameters for the simulation of discharge and sediment yield include curve number, base flow alpha factor, soil evaporation compensation factor, soil available water capacity, soil profile depth, surface flow lag time and channel re‐entrained linear parameter, etc. Copyright © 2009 John Wiley & Sons, Ltd.     

Modelling sediment and total phosphorus export from a lowland catchment: comparing sediment routing methods

Bank erosion is the main source of suspended sediment (SS) and diffuse total phosphorus (TP) in many lowland catchments. This study compared a physically based sediment routing method (Physical method), which distinguishes between stream bed and bank erosion, with the original sediment routing method (Original method) within the Soil and Water Assessment Tool (SWAT) version 2009, for simulating SS and TP losses from a lowland catchment. A SWAT model was set up for the lowland River Odense catchment in Denmark and calibrated against observed stream flow and phosphate (PO₄) loads. On the basis of an initial calibration of hydrological and PO₄ parameters, the SWAT model with the Original method (Original model) and the SWAT model with the Physical method (Physical model) were calibrated separately against observed SS and TP loads. The SWAT model simulated daily stream flow well but underestimated PO₄ loads. The Physical model simulated daily SS and TP better than the Original model. The simulated contribution of bank erosion to SS in the Physical model (99%) was close to the estimated contribution from in situ erosion measurements (90–94%). Compared with the Original method, the Physical method is not only more conceptually correct but also improves model performance. Copyright © 2014 John Wiley & Sons, Ltd.     

Effect of modelling scale on the assessment of climate change impact on river runoff

Abstract

The effect of using two distributed hydrological models with different degrees of spatial aggregation on the assessment of climate change impact on river runoff was investigated. Analyses were conducted in the Narew River basin situated in northeast Poland using a global hydrological model (WaterGAP) and a catchment-scale hydrological model (SWAT). Climate change was represented in both models by projected changes in monthly temperature and precipitation between the period 2040–2069 and the baseline period, resulting from two general circulation models: IPSL-CM4 and MIROC3.2, both coupled with the SRES A2 emissions scenario. The degree of consistency between the global and the catchment model was very high for mean annual runoff, and medium for indicators of high and low runoff. It was observed that SWAT generally suggests changes of larger magnitude than WaterGAP for both climate models, but SWAT and WaterGAP were consistent as regards the direction of change in monthly runoff. The results indicate that a global model can be used in Central and Eastern European lowlands to identify hot-spots where a catchment-scale model should be applied to evaluate, e.g. the effectiveness of management options.

Editor D. Koutsoyiannis; Associate editor F.F. Hattermann

Citation Piniewski, M., Voss, F., Bärlund, I., Okruszko, T., and Kundzewicz. Z.W., 2013. Effect of modelling scale on the assessment of climate change impact on river runoff. Hydrological Sciences Journal, 58 (4), 737–754.     

Palaeoecology, reference conditions and classification of ecological status: the EU Water Framework Directive in practice

The European Union's Water Framework Directive (WFD) requires that all Member States within the European Union determine reference conditions for aquatic ecosystems to provide a baseline against which to measure the effects of past and present activities. Reference conditions are subsequently used to classify the ecological status of European waters. The decisions regarding environmental status will be important future elements in the management of European coastal waters. We have developed a number of classification scenarios for total nitrogen (TN) in the overlying waters of the southern part of Roskilde Fjord, Denmark, taking as our basis a palaeoecological reconstruction of fluctuations in TN between 1850 and 1995. We present a provisional classification scheme for the ecological status of Roskilde Fjord, sensu the WFD. Decision(s) regarding the deviation from reference conditions will give a wide range of apparent ecological status from good, through moderate and poor, to bad depending upon the definition of an acceptable deviation from reference conditions. The determination of an acceptable deviation will ultimately be a political decision, and will result in a wide range in the protection of coastal waters in Europe. There is still, however, an urgent need for a sound scientific documentation of the various scenarios for the implementation of the WFD.     

Prediction of sedimentation in reservoirs by combining catchment based model and stream based model with limited data

Estimation of sedimentation in reservoirs helps in the management and design of the reservoir's useful capacity. This research was done on the Awash River basin at the Koka Dam Reservoir in Ethiopia. The method applied was the loose integration of the Soil and Water Assessment Tool(SWAT) model and Hydrologic Engineering Center-River Analysis System(HEC-RAS) model for the estimation of the sediment load reaching the reservoir. The SWAT model was used for the estimation of erosion at the catchment level,and the HEC-RAS model was applied to estimate the sediment transport in the river channel. The implemented method allows sedimentation in the floodplains and bed shear stress to be considered in the sediment modeling, which cannot be considered in the SWAT model. In addition, the river cross sectional properties and the hydrodynamic processes in the rivers were considered in the modeling process. The data used in this study are a combination of i) observed data collected by government agencies, ii) data available online in data repositories, and iii) data extracted from remote sensing in the Shuttle Radar Topographic Mission(SRTM) Digital Elevation Model(DEM). The calibration and validation of the SWAT model was done by using Sequential Uncertainty Fitting(SUIF-2) calibration and validation tools. The HEC-RAS model was calibrated by adjusting the roughness factor. The output from the integrated approaches gives better estimates of flow and sediment near the inlet to the reservoir, with coefficients of determination of 0.85 and 0.67, respectively, and Nash Sutcliffe coefficients of model fit efficiency of 0.90 and 0.62, respectively, for daily simulations.     

Predicting saturation‐excess runoff distribution with a lumped hillslope model: SWAT‐HS

Saturation‐excess runoff is the major runoff mechanism in humid well‐vegetated areas where infiltration rates often exceed rainfall intensity. Although the Soil and Water Assessment Tool (SWAT) is one of the most widely used models, it predicts runoff based mainly on soil and land use characteristics, and is implicitly an infiltration‐excess runoff type of model. Previous attempts to incorporate the saturation‐excess runoff mechanism in SWAT fell short due to the inability to distribute water from one hydrological response unit to another. This paper introduces a modified version of SWAT, referred to as SWAT‐Hillslope (SWAT‐HS). This modification improves the simulation of saturation‐excess runoff by redefining hydrological response units based on wetness classes and by introducing a surface aquifer with the ability to route interflow from “drier” to “wetter” wetness classes. Mathematically, the surface aquifer is a nonlinear reservoir that generates rapid subsurface stormflow as the water table in the surface aquifer rises. The SWAT‐HS model was tested in the Town Brook watershed in the upper reaches of the West Branch Delaware River in the Catskill region of New York, USA. SWAT‐HS predicted discharge well with a Nash‐Sutcliffe Efficiency of 0.68 and 0.87 for daily and monthly time steps. Compared to the original SWAT model, SWAT‐HS predicted less surface runoff and groundwater flow and more lateral flow. The saturated areas predicted by SWAT‐HS were concentrated in locations with a high topographic index and were in agreement with field observations. With the incorporation of topographic characteristics and the addition of the surface aquifer, SWAT‐HS improved streamflow simulation and gave a good representation of saturated areas on the dates that measurements were available. SWAT‐HS is expected to improve water quality model predictions where the location of the surface runoff matters.     

Development of a polder module in the SWAT model: SWATpld for simulating polder areas in south‐eastern China

Polders are one of the most common artificial hydrological entities in the plain river network regions of China. Due to enclosed dikes, manual drainage, and irrigation intake operations, polders have had a significant impact on the hydrological processes of these areas. Distributed hydrological models are effective tools to understand and reproduce the hydrological processes of a watershed. To date, however, few models are able to simulate the drainage and irrigation intake interactions of polders at a watershed scale. This study develops a modified version of the Soil and Water Assessment Tool (SWAT) model, which is designed to better represent polders (SWATpld). The SWATpld model simulates drainage and irrigation intake processes by calculating the excess‐water storage in the inner rivers and irrigation schedule for paddy rice in the polder. Both SWAT and SWATpld models were tested for the Liyang watershed. SWATpld outperformed SWAT in simulating the daily discharge and intake of the experimental polder and predicting the monthly peak flow at the outlet of the Liyang watershed, which suggests that the modified model simulates the hydrological responses of the study watershed with polder operations more realistically than the original SWAT model does. Further evaluation at various locations and in various climate conditions would increase the confidence of this model.     

Multi-objective autocalibration of SWAT model for improved low flow performance for a small snowfed catchment

ABSTRACT

A reliable modelling framework needs to ensure that the model is simulating reality with limited uncertainty, thus enhancing its predictive ability. In the literature, hydrological model assessment using one or more metrics is reported to be inadequate when the river flow regime is required to be reproduced comprehensively. This research is aimed to: (a) calibrate the Soil and Water Assessment Tool (SWAT) based on the concept of multi-objective optimization by applying the Borg multi-objective evolutionary algorithm (MOEA); (b) apply hydrological signatures as objective functions; and (c) adopt a multi-metric approach for model evaluation. The SWAT model was coupled with a relatively newer and powerful Borg MOEA. The inclusion of hydrological signatures as objective functions along with the conventional statistical functions assisted in improving the performance for low flows by 135% in terms of volume efficiency and 65% for flow time series simulation.     

Regional water balance modelling in the NOPEX area: development and application of monthly water balance models

One of the main purposes of a water balance study is to evaluate the net available water resources, both on the surface and in the subsurface. Water balance models that simulate hydrographs of river flow on the basis of available meteorological data would be a valuable tool in the hands of the planners and designers of water resources systems. In this paper, a set of simple monthly snow and water balance models has been developed and applied to regional water balance studies in the NOPEX area. The models require as input monthly areal precipitation, monthly long-term average potential evapotranspiration and monthly mean air temperature. The model outputs are monthly river flow and other water balance components, such as actual evapotranspiration, slow and fast components of river flow, snow accumulation and melting. The results suggest that the proposed model structure is suitable for water balance study purposes in seasonally snow-covered catchments located in the region.     

An improved process-based representation of stream solute transport in the soil and water assessment tools

Hydrological models have long been used to study the interactions between land, surface and groundwater systems, and to predict and manage water quantity and quality. The soil and water assessment tool (SWAT), a widely used hydrological model, can simulate various ecohydrological processes on land and subsequently route the water quality constituents through surface and subsurface waters. So far, in-stream solute transport algorithms of the SWAT model have only been minimally revised, even though it has been acknowledged that an improvement of in-stream process representation can contribute to better model performance with respect to water quality. In this study, we aim to incorporate a new and improved solute transport model into the SWAT model framework. The new process-based model was developed using in-stream process equations from two well established models—the One-dimensional Transport with Inflow and Storage model and the Enhanced Stream Water Quality Model. The modified SWAT model (Mir-SWAT) was tested for water quality predictions in a study watershed in Germany. Compared to the standard SWAT model, Mir-SWAT improved dissolved oxygen (DO) predictions by removing extreme low values of DO (<6 mg/L) simulated by SWAT. Phosphate concentration peaks were reduced during high flows and a better match of daily predicted and measured values was attained using the Mir-SWAT model (R² = 0.17, NSE = −0.65, RSR = 1.29 with SWAT; R² = 0.28, NSE = −0.04, RSR = 1.02 with Mir-SWAT). In addition, Mir-SWAT performed better than the SWAT model in terms of Chlorophyll-a content particularly during winter months, improving the NSE and RSR for monthly average Chl-a by 74 and 42%, respectively. With the new model improvements, we aim to increase confidence in the stream solute transport component of the model, improve the understanding of nutrient dynamics in the stream, and to extend the applicability of SWAT for reach-scale analysis and management.