Taxonomy and distribution of surface microlayer bacteria from two estuarine sites

The surface microlayer population of two estuarine sites was sampled to determine the numbers of bacteria present. Random isolates from one site were examined taxonomically, with subsurface and sediment samples taken for comparison. There were 130 to 5000 times more bacterial cells per ml in the surface microlayer as compared to the subsurface water, agreeing with the observations of other investigators. The surface population was found to be different taxonomically from the subsurface and sediment isolates. Pseudomonads predominated among the surface isolates while ca. onethird of the subsurface isolates werePseudomonas species.Alcaligenes species were found only in the subsurface population and comprised nearly one-half of these isolates. The majority of the surface and subsurface bacteria required no salts for growth, whereas most of the sediment bacterial isolates required either Na⁺ or Mg⁺⁺.     

Biodegradation of anionic surfactants by isolated bacteria from activated sludge

Sodium dodecyl sulphate, (SDS) is an anionic surfactant that widely used all over the world. They will eventually end-up and accumulate in household or industrial sewage. Due to their high foaming capabilities, which can cause numerous problems in sewage treatment facilities as well as direct toxic effects on many different organisms in ecosystem; they are generally considered as serious pollutants. In this survey, two different bacteria were isolated from Tehran municipal activated sludge. Biochemical tests as well as 16S rRNA gene sequencing for identification have been applied. After experiments to optimize the pH and temperature for growth of the two bacterial isolates, the extent of SDS utilization was evaluated by HPLC method. Two bacterial isolates show which ability to rapidly and actively degrade SDS upon using it as their sole source of carbon. The identification tests have indicated the two isolates to be Acinetobacter johnsoni and Pseudomonas beteli. The Pseudomonas beteli and Acinetobacter johnsoni isolates were able to degrade 97.2% and 96.4% of the original SDS levels after 10 days of growth; respectively. Mixed culture of the two isolates did not significantly increase SDS utilization, (97.6%). In conclusion, the results of this study suggest that growth of simple bacteria such as Acinetobacter or Pseudomonas in household and industrial sewage can be cost-effective method anionic surfactants elimination.     

Characterization of elemental release during microbe-granite interactions at T = 28 °C

This study used batch reactors to characterize the mechanisms and rates of elemental release (Al, Ca, K, Mg, Na, F, Fe, P, Sr, and Si) during interaction of a single bacterial species (Burkholderia fungorum) with granite at T = 28 °C for 35 days. The objective was to evaluate how actively metabolizing heterotrophic bacteria might influence granite weathering on the continents. We supplied glucose as a C source, either NH₄ or NO₃ as N sources, and either dissolved PO₄ or trace apatite in granite as P sources. Cell growth occurred under all experimental conditions. However, solution pH decreased from ∼7 to 4 in NH₄-bearing reactors, whereas pH remained near-neutral in NO₃-bearing reactors. Measurements of dissolved CO₂ and gluconate together with mass-balances for cell growth suggest that pH lowering in NH₄-bearing reactors resulted from gluconic acid release and H⁺ extrusion during NH₄ uptake. In NO₃-bearing reactors, B. fungormum likely produced gluconic acid and consumed H⁺ simultaneously during NO₃ utilization.Over the entire 35-day period, NH₄-bearing biotic reactors yielded the highest release rates for all elements considered. However, chemical analyses of biomass show that bacteria scavenged Na, P, and Sr during growth. Abiotic control reactors followed different reaction paths and experienced much lower elemental release rates compared to biotic reactors. Because release rates inversely correlate with pH, we conclude that proton-promoted dissolution was the dominant reaction mechanism. Solute speciation modeling indicates that formation of Al-F and Fe-F complexes in biotic reactors may have enhanced mineral solubilities and release rates by lowering Al and Fe activities. Mass-balances further reveal that Ca-bearing trace phases (calcite, fluorite, and fluorapatite) provided most of the dissolved Ca, whereas more abundant phases (plagioclase) contributed negligible amounts. Our findings imply that during the incipient stages of granite weathering, heterotrophic bacteria utilizing glucose and NH₄ only moderately elevate silicate weathering reactions that consume atmospheric CO₂. However, by enhancing the dissolution of non-silicate, Ca-bearing trace minerals, they could contribute to high Ca/Na ratios commonly observed in granitic watersheds.     

Biotransformation potential of hexavalent chromium by Bacillus pumilus-S4, Pseudomonas doudoroffii-S5 and Exiguobacterium-S8 in association with hydrophytes

Three chromium-resistant bacteria Bacillus pumilus-S4, Pseudomonas doudoroffii-S5 and Exiguobacterium-S8 were isolated from chromium-contaminated wastewater/soil and could resist very high concentrations of potassium chromate in Luria agar (up to 25 mg ml^?1) and acetate minimal medium (2 mg ml^?1). The strains showed growth at diverse pH and temperatures and could resist multiple heavy metals. Pseudomonas doudoroffii-S5 reduced (8.27 mg hexavalent chromium 24 h^?1) at a lower initial potassium chromate concentration (100 μg ml^?1), but overall more chromate (28.4 mg hexavalent chromium 24 h^?1) was reduced at a higher initial concentration (1,000 μg ml^?1). The addition of various heavy metals (zinc sulphate, copper sulphate, and manganese sulphate at 50 μg ml^?1) in the chromium reduction media did not significantly affect the hexavalent chromium reduction potential of these isolates. The chromium removal/detoxification potential of these strains increased when used in conjunction with hydrophytes Eichornia crassipes and Pistia stratiotes. Interestingly, the whole process runs automatically with less energy input, that is, the bacterial strains support the growth of plant while in turn the plant releases exudates that help bacterial growth.     

Suppressive biomasses and antagonist bacteria for an eco-compatible control of Verticillium dahliae on nursery-grown olive plants

Two organic amendments (OMW-M1 and OMW-M2), based on olive mill wastes (OMWs) subjected to advanced processes of aerobic static storage or composting, were tested for their suppressive activity against Verticillium dahliae, the causal agent of olive Verticillium wilt. OMW-M1 and OMW-M2 drastically inhibited the pathogen growth in vitro and then were further tested in suppressive pot experiments. The amendments, mixed at 15 % (v/v) with a nursery standard plant-growth matrix, were tested alone or in combination with two biocontrol bacteria (Bacillus amyloliquefaciens and Burkholderia cepacia) selected from suppressive soils. All mixtures were artificially contaminated with V. dahliae microsclerotia (MS), the density of which was periodically monitored by either a semi-selective medium or a specific real-time Polymerase Chain Reaction technique. In plant-less pot assays conducted in a growth chamber, OMW-M1 was the most effective amendment, reducing V. dahliae MS density by 100 % after 90 days with respect to the untreated control. In nursery experiments with pot-growing olive plants, OMW-M1, particularly when combined with the biocontrol bacteria, confirmed its strong suppressive activity reducing up to 100 % the density of V. dahliae MS in the rhizosphere behaving even better than a commercial biofungicide (Trichoderma asperellum TV1) used as a control. The best combined treatment also reduced plant mortality and increased root and shoot extension. It is concluded that organic amendments from stabilized olive mill by-products showed positive agronomic and phytosanitary properties on pot-growing olive plants and, particularly when enriched with biocontrol agents, they are potentially suitable for use in sustainable agriculture.     

Impact of fertilizer plant effluent on water quality

The impact of National Fertilizer Company of Nigeria outfall effluent on the physicochemistry and bacteriology of Okrika creek was investigated during the sampling period from May to December, 1998. The National Fertilizer Company of Nigeria outfall effluent, the Okrika creek water and the Ikpukulubie creek (control) water samples were collected. The physico-chemical parameters analyzed for all the samples included temperature, pH, total chloride, total dissolved solids, dissolved oxygen, conductivity, free ammonia, total phosphate, urea, zinc and iron, while the bacteriological determinations were total culturable aerobic heterotrophic bacteria count and identification of representative isolates. The Okrika creek recorded higher concentrations for all the physico-chemical parameters and bacteria load than the control creek. The higher values of pH, Free NH₃, urea, TDS and the conductivity of the National Fertilizer Company of Nigeria outfall effluent above the FEPA standards reflect the poor effluent quality generated by National Fertilizer Company of Nigeria. The bacteria species isolated from the samples include Aerococcus viridans, Alcaligenes faecalis, Bacillus cereus, Citrobacter freundii, Escherichia coli, Klebsiella pneumoniae, Proteus vulgaris, Pseudomonas aeruginosa, Serratia marcescens and Staphylococcus aureus. In general, the investigation revealed that there was an extremely adverse impact on the physico-chemical and bacteriological water quality characteristics of the Okrika creek as a result of the discharge of poor quality effluent from National Fertilizer Company of Nigeria operations.     

Fast bioremediation of petroleum-contaminated soils by a consortium of biosurfactant/bioemulsifier producing bacteria

Biodegradation of petroleum hydrocarbons as a decontamination mechanism is a relatively slow process. This study aimed to investigate the impact of a tailored consortium of bacteria with higher capacities in biosurfactant production and biodegradation on the acceleration of the biodecontamination process. To this end, 18 biosurfactant producing bacteria were isolated from the crude oil-contaminated soil samples of Isfahan refinery, and the activity of the produced biosurfactants was measured in terms of surface tension reduction and emulsification E24 test. Then, the isolates screened for the biodegradation of kerosene hydrocarbons and chemical structure of the purified biosurfactants produced by the most efficient isolates were partially characterized. Next, the isolates were sorted based on their surfactant activity and biodegradation efficiency, and the higher ranked bacteria thus selected were utilized to form an efficient consortium removing hydrocarbons from the oil-contaminated soil samples in a slurry phase system. The consortium consisted of Bacillus subtilis tb1 and Pseudomonas aeruginosa species having the highest biodegradation capabilities and surface activities. The results revealed that the hydrocarbon removal efficiency of the consortium was at least 25 % higher than single species, and the final removal efficiency for the consortium could be reached in a considerably shorter time.     

Cadmium (II) distribution in complex aquatic systems containing ferrihydrite, bacteria and an organic ligand: The effect of bioactivity

The distribution of Cd²⁺ in the presence of phthalic acid (H₂L_p), ferrihydrite and bacteria (Comamonas spp.) was investigated in biologically active systems involving H₂L_p biodegradation. Tests showed that Cd²⁺ sorption onto bacteria, ferrihydrite and bacteria-ferrihydrite mixture increased with pH in all systems, irrespective of H₂L_p degradation or not. The use of bacterial growth medium, Bushnell Hass Broth modified for low phosphate, had negligible effect on Cd sorption. In the presence of ferrihydrite, no difference was observed between Cd²⁺ sorption in the ferrihydrite-live bacteria and in the ferrihydrite-dead bacteria systems as ferrihydrite proved to be the dominant sorption phase. Cadmium sorption to ferrihydrite and to bacterial cells was described using the diffuse layer model and a nonelectrostatic 4-site model, respectively, which were developed for systems lacking H₂L_p degradation. For systems experiencing H₂L_p degradation this modeling approach predicted the general trend of Cd²⁺ sorption-edge shift and gave good fits to the observed sorption data. The results obtained demonstrate that Cd²⁺ sorption in the biologically active system was reasonably estimated by a model developed for biologically inactive systems, although uncertainty exists due to processes involving H₂L_p biodegradation products and changes in the bacterial population.     

Controls on Fe reduction and mineral formation by a subsurface bacterium

The reductive dissolution of FeIII (hydr)oxides by dissimilatory iron-reducing bacteria (DIRB) could have a large impact on sediment genesis and Fe transport. If DIRB are able to reduce FeIII in minerals of high structural order to carry out anaerobic respiration, their range could encompass virtually every O₂-free environment containing FeIII and adequate conditions for cell growth. Previous studies have established that Shewanella putrefaciens CN32, a known DIRB, will reduce crystalline Fe oxides when initially grown at high densities in a nutrient-rich broth, conditions that poorly model the environments where CN32 is found. By contrast, we grew CN32 by batch culture solely in a minimal growth medium. The stringent conditions imposed by the growth method better represent the conditions that cells are likely to encounter in their natural habitat. Furthermore, the expression of reductases necessary to carry out dissimilatory Fe reduction depends on the method of growth. It was found that under anaerobic conditions CN32 reduced hydrous ferric oxide (HFO), a poorly crystalline FeIII mineral, and did not reduce suspensions containing 4 mM FeIII in the form of poorly ordered nanometer-sized goethite (α-FeOOH), well-ordered micron-sized goethite, or nanometer-sized hematite (α-Fe₂O₃) crystallites. Transmission electron microscopy (TEM) showed that all minerals but the micron-sized goethite attached extensively to the bacteria and appeared to penetrate the outer cellular membrane. In the treatment with HFO, new FeII and FeIII minerals formed during reduction of HFO-Fe in culture medium containing 4.0 mmol/L P_i (soluble inorganic P), as observed by TEM with energy-dispersive X-ray spectroscopy, selected area electron diffraction, and X-ray diffraction. The minerals included magnetite (Fe₃O₄), goethite, green rust, and vivianite [Fe₃(PO₄)₂ · 8H₂O]. Vivianite appeared to be the stable end product and the mean coherence length was influenced by the rate of FeIII reduction. When P_i was 0.4 mol/L under otherwise identical conditions, goethite was the only mineral observed to form, and less Fe²⁺ was produced overall. Hence, the ability of DIRB to reduce Fe (hydr)oxides may be limited when the bacteria are grown under nutrient-limited conditions, and the minerals that result depend on the vigor of FeIII reduction.     

Characterization of elemental release during microbe-basalt interactions at T = 28 °C

This study used batch reactors to characterize the rates and mechanisms of elemental release during the interaction of a single bacterial species (Burkholderia fungorum) with Columbia River Flood Basalt at T = 28 °C for 36 days. We primarily examined the release of Ca, Mg, P, Si, and Sr under a variety of biotic and abiotic conditions with the aim of evaluating how actively metabolizing bacteria might influence basalt weathering on the continents. Four days after inoculating P-limited reactors (those lacking P in the growth medium), the concentration of viable planktonic cells increased from ∼10⁴ to 10⁸ CFU (Colony Forming Units)/mL, pH decreased from ∼7 to 4, and glucose decreased from ∼1200 to 0 μmol/L. Mass-balance and acid-base equilibria calculations suggest that the lowered pH resulted from either respired CO₂, organic acids released during biomass synthesis, or H⁺ extrusion during uptake. Between days 4 and 36, cell numbers remained constant at ∼10⁸ CFU/mL and pH increased to ∼5. Purely abiotic control reactors as well as control reactors containing inert cells (∼10⁸ CFU/mL) showed constant glucose concentrations, thus confirming the absence of biological activity in these experiments. The pH of all control reactors remained near-neutral, except for one experiment where the pH was initially adjusted to 4 but rapidly rose to 7 within 2 days. Over the entire 36 day period, P-limited reactors containing viable bacteria yielded the highest Ca, Mg, Si, and Sr release rates. Release rates inversely correlate with pH, indicating that proton-promoted dissolution was the dominant reaction mechanism. Both biotic and abiotic P-limited reactors displayed low P concentrations. Chemical analyses of bacteria collected at the end of the experiments, combined with mass-balances between the biological and fluid phases, demonstrate that the absence of dissolved P in the biotic reactors resulted from microbial P uptake. The only P source in the basalt is a small amount of apatite (∼1.2%), which occurs as needles within feldspar grains and glass. We therefore conclude that B. fungorum utilized apatite as a P source for biomass synthesis, which stimulated elemental release from coexisting mineral phases via pH lowering. The results of this study suggest that actively metabolizing bacteria have the potential to influence elemental release from basalt in continental settings.     

Effects of electrolytes on attachment of aquatic bacteria to solid surfaces

The influence of electrolytes on the adhesion to surfaces by two freshwater bacteria (Pseudomonas fluorescens, Chromobacterium sp.), a marine bacterium (Pseudomonas sp. NCMB 2021), and eight estuarine isolates was investigated with interference reflection microscopy (IRM). IRM is a light microscope technique which allows evaluation of changes in bacterium-substratum separation distance within a range of 0 to ca. 100 nm by changes in image darkness and brightness. The addition of calcium chloride (5 mM) or lanthanum chloride (75 μM or 125 μM) to suspensions of the freshwater bacteria produced changes in the image consistent with a reduction in cellsurface separation distance. However, the addition of calcium chloride to suspensions of the estuarine or marine bacteria caused little or no change in image. As the addition of electrolytes would be expected to facilitate adhesion by reducing electrostatic repulsion between the two surfaces, the results suggest that electrostatic repulsion may be of little consequence to bacterial adhesion in saline environments.     

Substrate inhibition kinetics of phenol degradation by Pseudomonas fluorescence from steady state and wash-out data

The present study investigated the phenol utilization kinetics of a pure culture of an indigenous Pseudomonas fluorescence under steady state and non-steady state (washout) conditions. Steady states of a continuous culture with an inhibitory substrate was used to estimate kinetic parameters under substrate limitation (chemo stat operation) Pure cultures of an indigenous Pseudomonas fluorescence were grown in continuous culture on phenol as the sole source of carbon and energy at dilution rates of 0.010 - 0.20/h. Using different dilution rates, several steady states were investigated and the specific phenol consumption rates were calculated. In addition, phenol degradation was investigated by increasing the dilution rate above the critical dilution rate (washout cultivation). The results showed that the specific phenol consumption rate increased with increased dilution rate at steady state and phenol degradation by Pseudomonas fluorescence can be described by simple substrate inhibition kinetics under substrate limitation but cannot be described by simple substrate inhibition kinetics under washout cultivation. Fitting of the steady state data from continuous cultivation to various inhibition models resulted in the best fit for Haldane, Yano and Koga (2), Aiba and Teissier kinetic inhibition models. The r_smax value of 0.229 mg/mg/h obtained from the inhibition model equations was comparable to the experimentally calculated r_smax value of 0.246 mg/mg/h obtained under washout cultivation. Therefore, the biokinetic constants evaluated using these models showed good tolerance and growth of the indigenous organism.     

Sulphur isotope fractionation by Desulfovibrio and Desulfotomaculum species

Isotopic analysis of H₂S evolved during the growth of Desulfovibrio species and Desulfotomaculum species on a defined sulphate medium at their specific optimal growth temperature indicate no noticeable intrageneric or intergeneric differences in regard to isotopic fractionation. Changes in the composition of the growth medium were reflected in minor changes in the isotopic composition of the H₂S evolved and in the rate of sulphate reduction. Intergeneric differences were noted in resting cell experiments and in the organisms' ability to reduce sulphite.     

Bacterially mediated mineralization of vaterite

Myxococcus xanthus, a common soil bacterium, plays an active role in the formation of spheroidal vaterite. Bacterial production of CO₂ and NH₃ and the transformation of the NH₃ to and OH⁻, thus increasing solution pH and carbonate alkalinity, set the physicochemical conditions (high supersaturation) leading to vaterite precipitation in the microenvironment around cells, and directly onto the surface of bacterial cells. In the latter case, fossilization of bacteria occurs. Vaterite crystals formed by aggregation of oriented nanocrystals with c-axis normal to the bacterial cell-wall, or to the core of the spherulite when bacteria were not encapsulated. While preferred orientation of vaterite c-axis appears to be determined by electrostatic affinity (ionotropic effect) between vaterite crystal (0001) planes and the negatively charged functional groups of organic molecules on the bacterium cell-wall or on extracellular polymeric substances (EPS), analysis of the changes in the culture medium chemistry as well as high resolution transmission electron microscopy (HRTEM) observations point to polymorph selection by physicochemical (kinetic) factors (high supersaturation) and stabilization by organics, both connected with bacterial activity. The latter is in agreement with inorganic precipitation of vaterite induced by NH₃ and CO₂ addition in the protein-rich sterile culture medium. Our results as well as recent studies on vaterite precipitation in the presence of different types of bacteria suggest that bacterially mediated vaterite precipitation is not strain-specific, and could be more common than previously thought.     

Evaluation of <Emphasis Type="Italic">smtA</Emphasis> expression and <Emphasis Type="Italic">E. coli</Emphasis> survival against cadmium ions

Cadmium and other heavy metals lead to environmental danger, and these heavy metals are a great threat to human and other animal’s health. Investigation of the relationship between survival of E. coli and metallothionein smtA gene expression against cadmium ion is the goal of this research. Survival of recombinant bacteria containing smtA gene was analyzed against various concentrations of cadmium chloride salt using optical density (OD). At the resistive range, recombinant bacteria were subjected to different treatments. At the logarithmic phase of bacterial growth, sampling, RNA extraction and cDNA synthesis were performed and smtA gene expression was then analyzed by real-time PCR using designed primers for smtA gene and Amp resistance (as the calibrator gene). Relative gene expression was calculated using the ??C_t method. The resistive range against cadmium chloride was 0.5–0.7 mM (minimum inhibitory concentration (MIC = 0.5 mM)). Survival and gene expression analysis showed that in induced bacteria, smtA expression was increased significantly that in turn conferred resistance to cadmium chloride prominently. There was a direct relationship between increased smtA gene expression and survival of the recombinant bacteria. Therefore, our result may help to confront to cadmium metal environmental pollution using overexpression of smtA gene expression in recombinant bacteria.     

新疆东帕米尔高原慕士塔格峰洋布拉克冰川雪冰及融水中可培养细菌多样性分析

采用LB和PYGV两种培养基分离培养慕士塔格峰洋布拉克冰川雪冰及融水中可培养细菌,通过分离菌株16S rDNA的PCR-RFLP图谱和基于基因序列相似性的系统发育分析揭示细菌多样性。结果从样品中共分离到178株菌,分属于变形菌门（Proteobacteria）中的α-Proteobacteria、β-Proteobac-teria、γ-Proteobacteria纲,厚壁菌门（Firmicutes）,放线菌门（Actinobacteria）和拟杆菌门（Bacteroidetes）6个类群,以假单胞菌Pseudomonas、黄杆菌Flavobacterium、紫色杆菌Janthinobacterium为优势菌群。 LB和PYGV两种培养基在分离的细菌数量及种群多样性、优势菌属、特有菌属方面呈现一定差异。结果表明,慕士塔格峰洋布拉克冰川地区可培养细菌多样性丰富,且存在一定的地方特异性菌属,寡营养培养基更利于极端微生物的恢复生长。     

Toxicity effects of four typical nanomaterials on the growth of <Emphasis Type="Italic">Escherichia coli</Emphasis>, <Emphasis Type="Italic">Bacillus subtilis</Emphasis> and <Emphasis Type="Italic">Agrobacterium tumefaciens</Emphasis>

To offer an insight into the toxicity of nanomaterials (NM) on the growth of bacteria, Escherichia coli (E. coli), Bacillus subtilis (B. subtilis) and Agrobacterium tumefaciens (A. tumefaciens) were exposed to nano-Au, nano-Ag, nano-Fe and fullerene (C₆₀) in this study. As an effective bactericide, nano-Ag induced high toxicity on these three bacteria; C₆₀ could inhibit their growth; however, B. subtilis and E. coli could recover as exposure time extended. Nano-Au and nano-Fe had hardly any effect on three bacteria. A. tumefaciens showed the lowest resistance and slowest growth rate during exposure. Images obtained by scanning electron microscope (SEM) revealed that nano-Ag could cause damage to the cell structure of three bacteria at 1 μg/mL. Slight damage on E. coli was found when exposed to C₆₀, whereas no obvious physical damage was found after exposure to nano-Au or nano-Fe. It is assumed that surface activities of NM might be responsible for the different toxic effects on these bacteria.     

Biosorption of Rare-Earth Elements and Yttrium by Heterotrophic Bacteria in an Aqueous Environment

This paper reports the results of the experimental determination of the coefficient of sorption of rare-earth elements and yttrium (REY) under conditions of acidic pH using several strains of heterotrophic bacteria (Microbacterium sp., Curtobacterium sp., Bacillus subtilis, Pseudomonas putida, and Bacillus pumilis) that are widespread in natural and technogenic waters of the Far East (Russia). Insignificant fractionation between heavy and light rare-earth elements, negative cerium and dysprosium anomalies, and a positive europium anomaly were revealed. The selectivity of REY biosorption by gram-positive and gram-negative bacteria, as well as inertia of the biosorption process under more acidic conditions of the medium, were shown.     

Modelling of the acid-base properties of two thermophilic bacteria at different growth times

Acid-base titrations and electrophoretic mobility measurements were conducted on the thermophilic bacteria Anoxybacillus flavithermus and Geobacillus stearothermophilus at two different growth times corresponding to exponential and stationary/death phase. The data showed significant differences between the two investigated growth times for both bacterial species. In stationary/death phase samples, cells were disrupted and their buffering capacity was lower than that of exponential phase cells. For G. stearothermophilus the electrophoretic mobility profiles changed dramatically. Chemical equilibrium models were developed to simultaneously describe the data from the titrations and the electrophoretic mobility measurements. A simple approach was developed to determine confidence intervals for the overall variance between the model and the experimental data, in order to identify statistically significant changes in model fit and thereby select the simplest model that was able to adequately describe each data set. Exponential phase cells of the investigated thermophiles had a higher total site concentration than the average found for mesophilic bacteria (based on a previously published generalised model for the acid-base behaviour of mesophiles), whereas the opposite was true for cells in stationary/death phase. The results of this study indicate that growth phase is an important parameter that can affect ion binding by bacteria, that growth phase should be considered when developing or employing chemical models for bacteria-bearing systems.     

Radiation resistant of native Deinococcus spp. isolated from the Lout desert of Iran “the hottest place on Earth”

Two native ionizing radiation-resistant bacteria were isolated and identified from a soil sample collected from extreme conditions of the Lout desert in Iran. The hottest land surface temperature has been recorded in the Lout desert from 2004 to 2009. Also, it is categorized as a hyper arid place. Both ionizing radiation and desiccation may cause damage on genome. Soil sample was irradiated in order to eliminate sensitive bacteria then cultured in one-tenth-strength tryptic soy broth medium. Bacterial suspension used for radiation treatment. Morphological and physiological characterization and phylogenetic studies based on 16S rRNA gene sequence were used for identification. The cells were rod shape, non-motile, non-spore forming and gram positive. The 16S rRNA gene sequence showed 99.5 % of similarity to Deinococcus ficus. Phylogenetic dendrogram demonstrated that the isolates branched with D. xibeiensis, D. ficus and D. mumbaiensis. Both isolates were resistant to >15 kGy of gamma radiation and >600 J m² of UV radiation. This is the first report on radiation resistant bacteria belonging to genus Deinococcus isolated from the Lout desert of Iran.