Evaluation of the use of legumes for biodegradation of petroleum hydrocarbons in soil

The aim of this research was to evaluate the potential of six legumes: Medicago sativa L., Glycine max, Arachis hypogea, Lablab purpureus, Pheseolus vulgaris and Cajanus cajan to restore within a short period of time soil contaminated with 3% crude oil. The legumes in five replications were grown in crude oil-contaminated and crude oil-uncontaminated soil in a completely randomized design. Plants were assessed for seedling emergence, plant height and leaf number. GC–MS was used to analyze the residual crude oil from the rhizosphere of the legumes. Plant growth parameters were reduced significantly (P < 0.05) for legumes in contaminated soil compared to their controls. In the 4th week after planting (WAP), shoot height increased across the species up to the 8th WAP. However, in the 12 WAP no significant increase in the shoot of all species was observed. Two WAP legumes planted in contaminated soil had significantly (P < 0.05) higher leaf number than these planted in uncontaminated soil with the exception of M. sativa. In the 4th WAP, only A. hypogea and P. vulgaris had increased leaf number, while in the 6th WAP, only L. purpureus had increased leaf number and survived up to the 12th WAP while most of the legumes species died. Chromatographic profiles indicated 100% degradation of the oil fractions in C. cajan and L. purpureus after 90 days. For other legumes however, greater losses of crude oil fractions C₁–C₁₀ and C₁₀–C₂₀ were indicated in rhizosphere soil of P. vulgaris and G. max, respectively. The most effective removal (93.66%) of C₂₁–C₃₀ components was observed in G. max-planted soil even though vegetation was not established. The legumes especially C. cajan, L. purpureus and A. hypogea are promising candidates for phytoremediation of petroleum hydrocarbon-impacted soil.     

H-bonding scheme and cation partitioning in axinite: a single-crystal neutron diffraction and Mössbauer spectroscopic study

The crystal chemistry of a ferroaxinite from Colebrook Hill, Rosebery district, Tasmania, Australia, was investigated by electron microprobe analysis in wavelength-dispersive mode, inductively coupled plasma–atomic emission spectroscopy (ICP–AES), ⁵⁷Fe Mössbauer spectroscopy and single-crystal neutron diffraction at 293 K. The chemical formula obtained on the basis of the ICP–AES data is the following: \( ^{X1,X2} {\text{Ca}}_{4.03} \,^{Y} \left( {{\text{Mn}}_{0.42} {\text{Mg}}_{0.23} {\text{Fe}}^{2 + }_{1.39} } \right)_{\varSigma 2.04} \,^{Z1,Z2} \left( {{\text{Fe}}^{3 + }_{0.15} {\text{Al}}_{3.55} {\text{Ti}}_{0.12} } \right)_{\varSigma 3.82} \,^{T1,T2,T3,T4} \left( {{\text{Ti}}_{0.03} {\text{Si}}_{7.97} } \right)_{\varSigma 8} \,^{T5} {\text{B}}_{1.96} {\text{O}}_{30} \left( {\text{OH}} \right)_{2.18} \). The ⁵⁷Fe Mössbauer spectrum shows unambiguously the occurrence of Fe²⁺ and Fe³⁺ in octahedral coordination only, with Fe²⁺/Fe³⁺ = 9:1. The neutron structure refinement provides a structure model in general agreement with the previous experimental findings: the tetrahedral T1, T2, T3 and T4 sites are fully occupied by Si, whereas the T5 site is fully occupied by B, with no evidence of Si at the T5, or Al or Fe³⁺ at the T1–T5 sites. The structural and chemical data of this study suggest that the amount of B in ferroaxinite is that expected from the ideal stoichiometry: 2 a.p.f.u. (for 32 O). The atomic distribution among the X1, X2, Y, Z1 and Z2 sites obtained by neutron structure refinement is in good agreement with that based on the ICP–AES data. For the first time, an unambiguous localization of the H site is obtained, which forms a hydroxyl group with the oxygen atom at the O16 site as donor. The H-bonding scheme in axinite structure is now fully described: the O16–H distance (corrected for riding motion effect) is 0.991(1) Å and an asymmetric bifurcated bonding configuration occurs, with O5 and O13 as acceptors [i.e. with O16···O5 = 3.096(1) Å, H···O5 = 2.450(1) Å and O16–H···O5 = 123.9(1)°; O16···O13 = 2.777(1) Å, H···O13 = 1.914(1) Å and O16–H···O13 = 146.9(1)°].     

Permeability of granular soil employing flexible wall permeameter

Understanding the changes in permeability of soil, when soil is subjected to high confining pressure and flow pressure, which may alter the textural and geomechanical characteristics of soil, is of great importance to many geo-engineering activities such as, construction of high-rise buildings near the coast or the water bodies, earthen dams, pavement subgrades, reservoir, and shallow repositories. It is now possible to evaluate the changes in permeability of soil samples under varying conditions of confining pressure and flow pressure using flexible wall permeameter (FWP). In the present study, investigation was carried out on a cylindrical sample of granular soil employing FWP under varied conditions of confining pressure (σ₃)—50–300 kPa, which can simulate the stress conditions equivalent to depth of about 20 m under the earth’s crust, and a flow pressure (f_p)—20–120 kPa, which is mainly present near the small earthen embankment dams, landfill liners, and slurry walls near the soft granular soil with high groundwater table. The obtained results indicate a linear relationship between hydraulic conductivity (k) with effective confining pressure (σ_eff.), k, decreasing linearly with an incremental change in σ_eff.. Further, k increases significantly with an increase in f_p corresponding to each σ_eff., and q increases significantly with increase in the f_p corresponding to each (σ₃). It was also observed that corresponding to the low f_p of 20 kPa, the reduction in k is nonlinear with σ_3. The percentage reduction in k is observed to be 9, 13, and 27% corresponding to σ₃ of 50–100, 100–200, and 200-300 kPa, respectively.     

A modified normalized model for predicting effective soil thermal conductivity

Effective soil thermal conductivity (λ _eff) describes the ability of a multiphase soil to transmit heat by conduction under unit temperature gradient. It is a critical parameter for environmental science, earth and planetary science, and engineering applications. Numerous models are available in the literature, but their applicability is generally restricted to certain soil types or water contents (θ). The objective of this study was to develop a new model in the similar form of the Johansen 1975 model to simulate the λ _eff(θ) relationship of soils of various soil textures and water contents. An exponential type model with two parameters is developed and a new function for calculating dry soil thermal conductivity is presented. Performance of the new model and six other normalized models were evaluated with published datasets. The results show that the new model is able to well mimic λ _eff(θ) relationship of soils from sand to silt loam and from oven dry to full saturation. In addition, it has the best performance among the seven models under test (with root-mean-square error of 0.059 W m^?1 °C^?1, average deviations of 0.0009 W m^?1 °C^?1, and Nash–Sutcliffe efficiency of 0.994). The new model has potential to improve the reliability of soil thermal conductivity estimation and be incorporated into numerical modeling for environmental, earth and engineering studies.     

Development of a two-stage washing and biodegradation system to remediate octachlorinated dibenzo-<Emphasis Type="Italic">p</Emphasis>-dioxin-contaminated soils

A two-stage system for octachlorinated dibenzo-p-dioxin (OCDD)-contaminated soil remediation was developed. Soil washing using emulsified oil (EO) was applied in the first stage for OCDD extraction followed by the second stage of bioremediation using P. mendocina NSYSU for remaining OCDD biodegradation. The major tasks included (1) determination of optimal soil washing conditions for OCDD extraction by EO, (2) evaluation of feasibility of OCDD biodegradation by P. mendocina NSYSU under aerobic cometabolic conditions using EO as the primary substrate, and (3) assessment of the effectiveness of OCDD removal using the two-stage system. During the soil washing stage, EO with two different oil-to-water ratios (1:50 and 1:200) and pore volumes were tested with initial soil OCDD concentration of 21,000 µg/kg. Results indicate that EO could effectively improve the solubility and desorption of OCDD in soils. Up to 74% of OCDD removal could be obtained after washing with 60 PVs of EO and dilution factor of 50. After the soil washing process, enriched P. mendocina NSYSU solution was added into the reactor to enhance the aerobic biodegradation of remaining OCDD in soils. P. mendocina NSYSU could use adsorbed EO globules as substrates and caused significant OCDD degradation via the aerobic cometabolic mechanism. Approximately 82% of the remaining OCDD could be removed after 50 days of operation, and P. mendocina NSYSU played important roles in OCDD biodegradation. Up to 87% of OCDD was removed through the EO washing and biodegradation process. The two-stage system is a potential technology to remediate dioxin-contaminated soils.     

Characterization of locally available soil as a liner material for solid waste landfills in Sri Lanka

This study aimed to develop a low-cost and effective clay liner material for solid waste landfills in Sri Lanka. A locally available clayey soil and its admixtures with 5 and 10% bentonite were examined for this purpose. Laboratory experiments to determine soil plasticity and swell index were carried out on the tested samples. Hydraulic conductivity (k) tests were carried out in the laboratory using water and an aqueous solution of CaCl₂ on unconsolidated samples prepared by either dry or slurry packing and pre-consolidated samples with five different consolidation pressures (p) from 10 to 200 kPa. Measured liquid limits for tested admixtures increased with increasing bentonite contents and correlated well with measured values of the swell index. The difference in permeant solutions had little effect on measured k values for both unconsolidated and pre-consolidated samples. The hydraulic conductivities were highly affected by changing p, i.e., the k values decreased on two orders of magnitude as p increased from 10 to 200 kPa. The Kozeny–Carman equation, a theoretical permeability model that expresses the k-porosity relationship, was applied to measured data including reported values. Results showed the Kozeny–Carman equation captured well the porosity-dependent k values for tested soils and their admixtures with bentonite under a wide range of void ratios, suggesting that the Kozeny–Carman equation is a useful tool to estimate the magnitude of k values for differently compacted soil and its bentonite admixtures.     

Representatives of genera <Emphasis Type="Italic">Malbosiceras</Emphasis> and <Emphasis Type="Italic">Pomeliceras</Emphasis> (Neocomitidae,Ammonoidea) from the Berriasian of the Crimean Mountains

The revised representatives of ammonite genera Malbosiceras and Pomeliceras from the Berriasian of the Crimean Mountains are classed with seven species, four of the first genus [M. malbosi (Pictet), M. chaperi (Pictet), M. broussei (Mazenot), M. pictetiforme Tavera] and three of the second one [P. aff. boisseti Nikolov, P. breveti (Pomel), P. (?) funduklense Lysenko et Arkadiev sp. nov.]. The identified species are described. The genus Mazenoticeras is considered as synonym of Malbosiceras. The above species prove that all the Berriasian zones (jacobi, occitanica and boissieri) are characteristic of corresponding deposits in the Crimean Mountains.     

Assessment of heavy metals in soil and terrestrial isopod <Emphasis Type="Italic">Porcellio laevis</Emphasis> in Tunisian industrialized areas

In this study, data on several metals (Cd, Pb, Zn and Cu) in soil and isopod Porcellio laevis taken at 21 sites from the most important industrial areas in Tunisia (Bizerte, Nabeul, Zaghouan, Sfax and Gabes) were presented. Heavy metal concentrations in both soil samples and isopods were determined using atomic absorption spectrometry. Soil contamination was estimated using the contamination factor (CF). On the other hand, the bioaccumulation factor (BAF) was determined to estimate metal accumulation in isopods. The CF values show that the level of contamination varies between sampled soils, which may be due to the source of pollution at each site. The BAF values allow defining the order of accumulation in P. laevis which was classified for the majority of the sampled sites as a macro-concentrator of Cu and Zn and a deconcentrator of Cd with some exceptions. A principal component analysis (PCA) was conducted between soil properties (pH, OM and CaCO₃) and metal concentrations in soils. Through PCA, we obtained four groups in which soils were distinguished by their physicochemical properties and their metal concentrations. Moreover, linear multiple regressions with a downward stepwise procedure were conducted to test the relationships between the physicochemical parameters and metal concentrations in both soils and isopods. Thus, positive correlations (0.78 < R ² < 0.99) were obtained for Pb considering dataset from the groups 1, 2 and for Zn with data of groups 2 and 3. Finally, results showed that P. laevis could be used as a bio-indicator for monitoring and reducing the impact of pollution in terrestrial ecosystems.     

Soil bacterial strains with heavy metal resistance and high potential in degrading diesel oil and <Emphasis Type="Italic">n</Emphasis>-alkanes

Four bacterial strains, capable of degrading diesel oil, n-alkanes or hexadecane, were isolated from soils contaminated with petroleum oil and identified. Strains of Pseudomonas sp., Pseudomonas putida TPHK-1 and Pseudomonas aeruginosa TPHK-4, were more efficient in degrading high concentrations of the hydrocarbons than the other two strains, Stenotrophomonas maltophilia TPHK-2 and Acenitobacter sp. TPHK-3. P. putida TPHK-1 exhibited tolerance to very high concentrations of heavy metals such as cadmium, lead, zinc and copper. The innate ability of P. putida TPHK-1, as evidenced by the amplified genes alkB1 and alkB2 that encode alkane hydroxylases, and cat12o and cat23o coding for catechol dioxygenase, in degrading diesel oil in the presence of heavy metals is far greater than that of the strains reported in the literature. Heavy metal tolerance coupled with rapid degradation of hydrocarbons, even at high concentrations, suggests that P. putida TPHK-1 has a great potential in remediating soils contaminated with mixtures of hydrocarbons and heavy metals.     

Competitive sorption of Ni and Zn at the aluminum oxide/water interface: an XAFS study

Trace metals (e.g. Ni, Zn) leached from industrial and agricultural processes are often simultaneously present in contaminated soils and sediments. Their mobility, bioavailability, and ecotoxicity are affected by sorption and cosorption at mineral/solution interfaces. Cosorption of trace metals has been investigated at the macroscopic level, but there is not a clear understanding of the molecular-scale cosorption processes due to lack of spectroscopic information. In this study, Ni and Zn cosorption to aluminum oxides (γ-Al₂O₃) in binary-sorbate systems were compared to their sorption in single-sorbate systems as a function of pH using both macroscopic batch experiments and synchrotron-based X-ray absorption fine structure spectroscopy. At pH 6.0, Ni and Zn were sorbed as inner-sphere surface complexes and competed for the limited number of reactive sites on γ-Al₂O₃. In binary-sorbate systems, Ni had no effect on Zn sorption, owning to its lower affinity for the metal oxide surface. In contrast, Zn had a higher affinity for the metal oxide surface and reduced Ni sorption. At pH 7.5, Ni and Zn were sorbed as mixed-metal surface precipitates, including Ni–Al layered double hydroxides (LDHs), Zn–Al LDHs, and likely Ni–Zn–Al layered triple/ternary hydroxides. Additionally, at pH 7.5, Ni and Zn do not exhibit competitive sorption effects in the binary system. Taken together, these results indicated that pH critically influenced the reaction products, and provides a crucial scientific basis to understand the potential mobility, bioavailability, and ecotoxicity of Ni and Zn in natural and contaminated geochemical environments.

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Characterization,dissolution and solubility of the hydroxypyromorphite–hydroxyapatite solid solution [(Pb<Subscript>x</Subscript>Ca<Subscript>1−x</Subscript>)<Subscript>5</Subscript>(PO<Subscript>4</Subscript>)<Subscript>3</Subscript>OH] at 25 °C and pH 2–9

Background

The interaction between Ca-HAP and Pb²⁺ solution can result in the formation of a hydroxyapatite–hydroxypyromorphite solid solution [(Pb_xCa_1?x)₅(PO₄)₃(OH)], which can greatly affect the transport and distribution of toxic Pb in water, rock and soil. Therefore, it’s necessary to know the physicochemical properties of (Pb_xCa_1?x)₅(PO₄)₃(OH), predominantly its thermodynamic solubility and stability in aqueous solution. Nevertheless, no experiment on the dissolution and related thermodynamic data has been reported.

Results

Dissolution of the hydroxypyromorphite–hydroxyapatite solid solution [(Pb_xCa_1?x)₅(PO₄)₃(OH)] in aqueous solution at 25 °C was experimentally studied. The aqueous concentrations were greatly affected by the Pb/(Pb + Ca) molar ratios (X_Pb) of the solids. For the solids with high X_Pb [(Pb_0.89Ca_0.11)₅(PO₄)₃OH], the aqueous Pb²⁺ concentrations increased rapidly with time and reached a peak value after 240–720 h dissolution, and then decreased gradually and reached a stable state after 5040 h dissolution. For the solids with low X_Pb (0.00–0.80), the aqueous Pb²⁺ concentrations increased quickly with time and reached a peak value after 1–12 h dissolution, and then decreased gradually and attained a stable state after 720–2160 h dissolution.

Conclusions

The dissolution process of the solids with high X_Pb (0.89–1.00) was different from that of the solids with low X_Pb (0.00–0.80). The average K _sp values were estimated to be 10^?80.77±0.20 (10^?80.57–10^?80.96) for hydroxypyromorphite [Pb₅(PO₄)₃OH] and 10^?58.38±0.07 (10^?58.31–10^?58.46) for calcium hydroxyapatite [Ca₅(PO₄)₃OH]. The Gibbs free energies of formation (ΔG _f ^o ) were determined to be ?3796.71 and ?6314.63 kJ/mol, respectively. The solubility decreased with the increasing Pb/(Pb + Ca) molar ratios (X_Pb) of (Pb_xCa_1?x)₅(PO₄)₃(OH). For the dissolution at 25 °C with an initial pH of 2.00, the experimental data plotted on the Lippmann diagram showed that the solid solution (Pb_xCa_1?x)₅(PO₄)₃(OH) dissolved stoichiometrically at the early stage of dissolution and moved gradually up to the Lippmann solutus curve and the saturation curve for Pb₅(PO₄)₃OH, and then the data points moved along the Lippmann solutus curve from right to left. The Pb-rich (Pb_xCa_1?x)₅(PO₄)₃(OH) was in equilibrium with the Ca-rich aqueous solution.

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Graphical abstractLippmann diagrams for dissolution of the hydroxypyromorphite–hydroxyapatite solid solution [(Pb_xCa_1?x)₅(PO₄)₃OH] at 25??C and an initial pH of 2.00.

     

Orthogonal test and regression analysis of the strain on silty soil in Shanghai under metro loading

Cyclic triaxial test by means of the geotechnical digital system is conducted for the soil near the Guoquan Road Station of Metro Line 10 in Shanghai to analyze the strain characteristics and the variation law of saturated silty soil under subway loading. Orthogonal design method is used to arrange the experiment, considering the following factors: frequency ratio f _R, cyclic stress ratio σ _R, vibration time ratio N _R, and the interaction function among them. Results show that the cyclic stress ratio σ _R, the frequency ratio f _R, the vibration time ratio N _R, and the interaction between the cyclic stress ratio σ _R and the vibration time ratio N _R have a significant effect on the axial strain of the subway tunnel. The effect of the interaction between the cyclic stress ratio σ _R and the vibration time ratio N _R is also significant. From the analysis of variance and regression theory, the nonlinear regression equation of the cumulative plastic strain of silty soil under subway loading is established. Residual analysis proves that the equation is ideal and credible. The results have important value for the design of subway tunnels.     

Assessment of bacterial diversity associated with crude oil-contaminated soil samples from Assam

In this study, we are reporting bacterial diversity in crude oil-contaminated soil of Assam, India. Integration of physiological community profiling, culture-dependent and culture-independent (metagenome) approaches, was employed to obtain a complete picture of the total bacterial diversity. Samples collected from 10 sites contaminated with crude oil ranging from 0.22 to 89.36% were analysed, and altogether 160 culturable bacteria were isolated (117 Gram-positive and 43 Gram-negative bacteria). Molecular identification showed the predominance of genera Lysinibacillus, Alcaligenes, Bacillus, Clostridium, Enterobacter and Pseudomonas. Conversely, denaturing gradient gel electrophoresis (DGGE) profiles of 16S rDNA phylotypes showed the predominance of Sphingomonas, Ralstonia, Sphingobium, Massilia, Acinetobacter and Pseudomonas. Both culture-dependent and culture-independent approaches resulted in 11 genera of which Bacillus and Pseudomonas were the key inhabitants creating most favourable bacterial milieu in the presence of crude oil contaminants. Metabolic fingerprints data depicted in PCA plot demonstrated that sites CTF-D-1 and Core-10 were most diverged. It was further confirmed that variations of bacterial species dominance in different sites were due to origin of hydrocarbon contamination. We here claim that the present findings is a first-hand report on combined physiological community profiling, culture-based and culture-independent approaches in assessing total bacterial diversity in crude oil-contaminated soil of Assam.     

Experimental calibration of Forsterite–Anorthite–Ca-Tschermak–Enstatite (FACE) geobarometer for mantle peridotites

The crystallization of plagioclase-bearing assemblages in mantle rocks is witness of mantle exhumation at shallow depth. Previous experimental works on peridotites have found systematic compositional variations in coexisting minerals at decreasing pressure within the plagioclase stability field. In this experimental study we present new constraints on the stability of plagioclase as a function of different Na₂O/CaO bulk ratios, and we present a new geobarometer for mantle rocks. Experiments have been performed in a single-stage piston cylinder at 5–10 kbar, 1050–1150?°C at nominally anhydrous conditions using seeded gels of peridotite compositions (Na₂O/CaO?=?0.08–0.13; X _Cr = Cr/(Cr?+?Al)?=?0.07–0.10) as starting materials. As expected, the increase of the bulk Na₂O/CaO ratio extends the plagioclase stability to higher pressure; in the studied high-Na fertile lherzolite (HNa-FLZ), the plagioclase-spinel transition occurs at 1100?°C between 9 and 10 kbar; in a fertile lherzolite (FLZ) with Na₂O/CaO?=?0.08, it occurs between 8 and 9 kbar at 1100?°C. This study provides, together with previous experimental results, a consistent database, covering a wide range of P–T conditions (3–9 kbar, 1000–1150?°C) and variable bulk compositions to be used to define and calibrate a geobarometer for plagioclase-bearing mantle rocks. The pressure sensitive equilibrium:

$$\mathop {{\text{M}}{{\text{g}}_{\text{2}}}{\text{Si}}{{\text{O}}_{\text{4}}}^{{\text{Ol}}}}\limits_{{\text{Forsterite}}} +\mathop {{\text{CaA}}{{\text{l}}_{\text{2}}}{\text{S}}{{\text{i}}_{\text{2}}}{{\text{O}}_{\text{8}}}^{{\text{Pl}}}}\limits_{{\text{Anorthite}}~} =\mathop {{\text{CaA}}{{\text{l}}_{\text{2}}}{\text{Si}}{{\text{O}}_{\text{6}}}^{{\text{Cpx}}}}\limits_{{\text{Ca-Tschermak}}} +{\text{ }}\mathop {{\text{M}}{{\text{g}}_{\text{2}}}{\text{S}}{{\text{i}}_{\text{2}}}{{\text{O}}_{\text{6}}}^{{\text{Opx}}}}\limits_{{\text{Enstatite}}} ,$$

has been empirically calibrated by least squares regression analysis of experimental data combined with Monte Carlo simulation. The result of the fit gives the following equation:

$$P=7.2( \pm 2.9)+0.0078( \pm 0.0021)T{\text{ }}+0.0022( \pm 0.0001)T{\text{ }}\ln K,$$

$${R^2}=0.93,$$

where P is expressed in kbar and T in kelvin. K is the equilibrium constant K?=?a _CaTs × a _en/a _an × a _fo, where a _CaTs, a _en, a _an and a _fo are the activities of Ca-Tschermak in clinopyroxene, enstatite in orthopyroxene, anorthite in plagioclase and forsterite in olivine. The proposed geobarometer for plagioclase peridotites, coupled to detailed microstructural and mineral chemistry investigations, represents a valuable tool to track the exhumation of the lithospheric mantle at extensional environments.

     

Systemic analysis of soil microbiome deciphers anthropogenic influence on soil ecology and ecosystem functioning

Soil is a complex ecosystem with defined microbial community signatures, modulated by the interaction between biotic and abiotic factors. Amidst biotic factors, land usage have significant impact onto the soil microbial structure and ecosystem functioning. In the current study, metagenomic approach was used to decipher effect of hospital settings on soil microbiome structure and physiological functions. Physico-chemical properties analysis revealed that key elements for maintenance of soil microflora, such as organic carbon, nitrogen, phosphorus and sulfur were relatively diminished within hospital soil, compared to garden soil. Comparative microbial diversity analysis with 97,315 SSU rRNA gene sequences generated from both the soil samples highlight relatively low microbial diversity, with an enrichment for Acidobacteria and Bacteroidetes and decreased Proteobacteria/Acidobacteria ratio. Comparative shotgun metagenome sequence analysis further revealed a shift in the physiological role of soil microbiomes with change in soil usage. Genes for carbohydrate, sulfur, potassium and nitrogen metabolism were significantly (q value <0.05) higher in the garden soil; while the genes for phage, plasmid DNA, transposon and aromatic compound metabolism were significantly enriched within hospital soil. Thus, the current study highlights a correlation between soil biochemistry and microbial ecology based on land usage.     

Natural speciation of nickel at the micrometer scale in serpentine (ultramafic) topsoils using microfocused X-ray fluorescence,diffraction, and absorption

Serpentine soils and ultramafic laterites develop over ultramafic bedrock and are important geological materials from environmental, geochemical, and industrial standpoints. They have naturally elevated concentrations of trace metals, such as Ni, Cr, and Co, and also high levels of Fe and Mg. Minerals host these trace metals and influence metal mobility. Ni in particular is an important trace metal in these soils, and the objective of this research was to use microscale (µ) techniques to identify naturally occurring minerals that contain Ni and Ni correlations with other trace metals, such as Fe, Mn, and Cr. Synchrotron based µ-XRF, µ-XRD, and µ-XAS were used. Ni was often located in the octahedral layer of serpentine minerals, such as lizardite, and in other layered phyllosilicate minerals with similar octahedral structure, such as chlorite group minerals including clinochlore and chamosite. Ni was also present in goethite, hematite, magnetite, and ferrihydrite. Goethite was present with lizardite and antigorite on the micrometer scale. Lizardite integrated both Ni and Mn simultaneously in its octahedral layer. Enstatite, pargasite, chamosite, phlogopite, and forsterite incorporated various amounts of Ni and Fe over the micrometer spatial scale. Ni content increased six to seven times within the same 500 µm µ-XRD transect on chamosite and phlogopite. Data are shown down to an 8 µm spatial scale. Ni was not associated with chromite or zincochromite particles. Ni often correlated with Fe and Mn, and generally did not correlate with Cr, Zn, Ca, or K in µ-XRF maps. A split shoulder feature in the µ-XAS data at 8400 eV (3.7 Å^?1 in k-space) is highly correlated (94% of averaged LCF results) to Ni located in the octahedral sheet of layered phyllosilicate minerals, such as serpentine and chlorite-group minerals. A comparison of bulk-XAS LCF to averaged µ-XAS LCF results showed good representation of the bulk soil via the µ-XAS technique for two of the three soils. In the locations analyzed by µ-XAS, average Ni speciation was dominated by layered phyllosilicate and serpentine minerals (76%), iron oxides (18%), and manganese oxides (9%). In the locations analyzed by µ-XRD, average Ni speciation was dominated by layered phyllosilicate, serpentine, and ultramafic-related minerals (71%) and iron oxides (17%), illustrating the complementary nature of these two methods.

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Functional Performance of Three Invasive <Emphasis Type="Italic">Marenzelleria</Emphasis> Species Under Contrasting Ecological Conditions Within the Baltic Sea

A 4-week laboratory experiment investigated the behaviour (survival and bioirrigation) and impact of the invasive polychaetes Marenzelleria viridis, M. neglecta and M. arctia on sediment-water solutes exchange, porewater chemistry, and Fe and P interactions in high-salinity sandy sediment (HSS) and low-salinity muddy sediment (LSM) from the Baltic Sea. M. viridis showed deep burrowing with efficient bioirrigation (11 L m^?2 day^?1) and high survival (71%) in HSS, while M. arctia exhibited shallow burrowing with high bioirrigation (12 L m^?2 day^?1) and survival (88%) in LSM. M. neglecta behaved poorly in both ecological settings (bioirrigation, 5–6 L m^?2 day^?1; survival, 21–44%). The deep M. viridis bioirrigation enhanced total microbial CO₂ (TCO₂) production in HSS by 175% with a net efflux of NH₄⁺ and PO₄^3?, at rates 3- to 27-fold higher than for the other species. Although the shallow and intense bioirrigation of M. arctia in LSM stimulated microbial TCO₂ production to some extent (61% enhancement), the nutrient fluxes close to zero indicate that it effectively prevented the P release. Porewater Fe:PO₄^3? ratios revealed that the oxidizing effect of M. arctia bioirrigation increased the PO₄^3? adsorption capacity of LSM twofold relative to defaunated controls while no buffering of PO₄^3? was detected in M. viridis HSS treatment. Therefore, the different behaviour of the three species in various environments and the sharp contrast between M. viridis and M. arctia effects on C, N and P cycling must be considered carefully when the ecological role of Marenzelleria species in the Baltic Sea is evaluated.     

Evaluation of the removal of heavy metals in a natural wetland impacted by mining activities in Mexico

This research is focused on evaluating heavy metals (Cd, Cu, Fe, Mn, Pb, and Zn) uptake and removal by Eleocharis ovata, Cyperus manimae, Typha dominguensis, and Pteridium aquilinum in a natural wetland impacted by mining activities. We analyzed heavy metals content and distribution in native plants, soils, and water of a semipermanent natural wetland in Taxco de Alarcón, Guerrero, and we also determined the physicochemical characteristics of the water. Translocation factor (TF) and bioconcentration factor (BCF) were evaluated. Results showed that physical and chemical conditions are favorable for plants development. Correlation analysis showed a good and positive relation (0.95) between Cu and Pb in soils and plants. In the analyzed matrices: Zn (0.62–2.20 mg/L) exceeded the permissible limits in water, high concentrations of Pb and Zn (26.57–525.67 and 266.67–983.33 mg/kg, respectively) were detected in the studied soils, and Pb exceeded the normal range for E. ovata and P. aquilinum in the analyzed plants. Uptake of heavy metals in the tissues of different species was found in the following order: root > leaf. Data of TF and BCF showed that E. ovata is a tolerant plant with respect to heavy metals exposure since TF value was greater than 1. This study showed that E. ovata could be considered as a bioaccumulator of heavy metals in contaminated soils.     

Spatial information of soil hydraulic conductivity and performance of cokriging over kriging in a semi-arid basin scale

Unlike the studies in small parcels by systematic measurements, the spatial variability of soil properties is expected to increase in those over relatively large areas or scales. Spatial variability of soil hydraulic conductivity (K _h) is of significance for the environmental processes, such as soil erosion, plant growth, transport of the plant nutrients in a soil profile and ground water levels. However, its variability is not much and sufficiently known at basin scale. A study of testing the performance of cokriging of K _h compared with that of kriging was conducted in the catchment area of Sarayköy II Irrigation Dam in Cank?r?, Turkey. A total of 300 soil surface samples (0–10 cm) were collected from the catchment with irregular intervals. Of the selected soil properties, because the water-stable aggregates (WSA) indicated the highest relationship with the hydraulic conductivity by the Pearson correlation analysis, it is used as an auxiliary variable to predict K _h by the cokriging procedure. In addition, the sampling density was reduced randomly to n = 175, n = 150, n = 75 and n = 50 for K _h to determine if the superiority of cokriging over kriging would exist. Statistically, the results showed that all reduced K _h was as good as the complete K _h when its auxiliary relations with WSA were used in cokriging. Particularly, the results of the “Relative Reduction in MSE” (RMSE) revealed that the reduced data set of n = 75 produced the most accurate map than the others. In this basin-scaled study, there was a clear superiority of the cokriging procedure by the reduction in data although a very undulating topography and topographically different aspects, two different land uses with non-uniform vegetation density, different parent materials and soil textures were present in the area. Hence, using the statistically significant auxiliary relationship between K _h and WSA might bring about a very useful data set for watershed hydrological researches.     

Determination of atrazine isotherms on agricultural soils

For determination of atrazine isotherms in agricultural soils of Fars Province, composite soil samples from 0 to 5 cm depth with textures of silty clay loam, clay loam and loam were collected. In order to form the atrazine isotherms, 10, 50 and 100 µg atrazine g^?1 soil was added to the soil samples. Soluble atrazine in water:soil ratios of 10:1, 50:1 and 200:1 was measured after 3-h shaking. Finally, for each cases of applied atrazine, water extractable atrazine was determined and quantified using gas chromatography instrument. The results indicated that there was a linear relationship between the logarithms of water extractable atrazine and added atrazine for different water:soil ratios. A general equation of WEA = K(WS) ^α (AA) ^β is obtained experimentally between water extractable atrazine, µg g^?1(WEA), and added atrazine, µg g^?1 (AA), where K, α and β are absorption constants; WS is the water:soil ratio, g g^?1. For the loam, silty clay loam and clay loam soil textures, the α were 0.49, 0.23 and 0.13, respectively, the β were 0.55, 0.806 and 0.21, respectively, and the K were 1.44, 0.78 and 25.38, respectively.