Fatty acids and sterols as source markers of organic matter in sediments of the North Carolina continental slope

To estimate the source and diagenetic state of organic matter reaching bottom sediments, fatty acids and sterols were measured in unconsolidated surface material (flocs) at 12 sites ranging from 600 to 2000 m across the mid-Atlantic continental slope off Cape Hatteras, North Carolina. Total free and esterefied fatty acids were similar in distribution and concentration to other coastal systems, with values ranging from 0.64 to 46.52 μg mg⁻¹ organic carbon (1.10–68.85 μg g⁻¹ dry sediment). Although shallow (600 m) stations contained significantly greater fatty acid concentrations than deep (> 1400m) stations, high variability observed at mid-depth (800 m) collections precluded a consistent relationship between total fatty acid concentration and station depth. At three sites where underlying sediments were also collected, decreases in total fatty acids, reduced amounts of polyenoic acids and significant presence of bacterial fatty acid suggest rapid reworking of labile organic material that reaches the sediment surface. The distribution of sterols was remarkably consistent among all sites even though there were large variations in concentrations (1.8–20.7 μg mg⁻¹ organic carbon). Sterol composition indicated phytoplankton, principally diatoms and dinoflagellates, as the principal source of labile organic matter to sediments, together with a significant input of cholest-5-en-3β-ol typical of zooplankton and their feeding activity. A minor but widespread terrigenous input was also evident based upon significant concentrations of sterols dominant in vascular plants.     

Organic matter assimilation and selective feeding by holothurians in the deep sea: some observations and comments

The selective feeding behaviour and assimilation efficiencies of deep-sea holothurians were investigated in order to assess their impact on carbon and nitrogen remineralisation on the Porcupine Abyssal Plain (PAP; 49°N 16°W, 4850 m water depth). Unfortunately, reliable determination of organic matter in the gut contents of the organisms proved to be difficult, because of the lysis of cells associated with the death of the animals on recovery. This was expressed in high levels of free fatty acids in the gut contents of Oneirophanta mutabilis, which we ascribe to unregulated lipolysis of phospholipids and triacylglycerides. It was not possible to estimate accurately the contribution that such material made to the gut contents, but based on the distributions of sterols in the gut sediments, it is likely to have been substantial. Therefore, all assimilation efficiencies calculated for holothurians in the deep sea should be treated with caution.Fortuitously, a bloom of holothurians that feed on the sediment surface (namely Amperima rosea and Ellipinion molle) during the period of study provided an opportunity indirectly to assess the impact of megafauna on organic matter cycling at the PAP. Observations suggest that the depletion of phytosterols from the surficial sediments between July and October 1997 resulted from the selective uptake of fresh phytodetritus by the blooming species. Deep-sea holothurians do not biosynthesise sterols de novo and an estimate of the sterol required by the increased population of A. rosea and E. molle is equivalent to the sterol flux to the seafloor during the spring/summer of 1997. The implications are dramatic. Firstly, these and other megafauna apparently turned over and selectively removed phytosterols from the freshly arrived phytodetritus and the surficial sediment (0–5 mm) at the PAP in less than four months. Secondly, their action impacted the food resource available to other organisms. Finally, as phytosterols are expensive to biosynthesise and are apparently an important resource for holothurians, we speculate that the supply of these compounds to the sedimentary community may be one important control on their population in the abyssal ocean.     

The lipid geochemistry of antarctic marine sediments: Bransfield strait

Ten sections of a 10m long sediment core from Bransfield Strait, Antarctic region, have been examined for hydrocarbons, fatty acids, fatty alcohols, sterols, hopanoic acids, lignins and stable isotope ratios. The resolvable lipid compound classes generally occur in the following order of abundance: n-fatty acids > n-alkanes > n-alcohols > sterols > PAH with n-fatty acids comprising 50–80% of the lipids. The distribution of various lipid components indicate that they are principally from marine autochthonous sources, largely from diatoms and bacteria and to a lesser extent from dinoflagellates. There is no evidence from the lipid fraction of significant terrestrial plant input, which was also confirmed by the absence of methoxyphenols of the lignin degradation products. Aeolian transport from other continents appears to be minor or negligible. Minor amounts of epigenetic (mature) triterpenoids and polynuclear aromatic hydrocarbons found in all the samples are probably derived from submarine outcrops of weathered coaliferous shales. Stable carbon isotope ratios fall within a narrow range (−25 to −26‰), characteristic of Antarctic plankton. Coprostanol is the major stanol identified in the sediment core, most probably derived from the excreta of marine mammals, i.e. whales. Perylene, the dominant PAH, appears to be of marine origin in these Antarctic sediments. The presence of labile alkenes, unsaturated fatty acids and diploptene to a depth of 10m implies that little diagenetic alteration of the lipids has occurred. The sub-zero bottom water temperatures and the anoxic environmental conditions of this basin have preserved the total organic matter in the sediments, at least down to a depth of 10m.     

Export flux of particles at the equator in the western and central Pacific ocean

Export of particles was studied at the equator during an El Nin˜o warm event (October 1994) as part of the French ORSTOM/FLUPAC program. Particulate mass, carbon (organic and inorganic) (C), nitrogen (N), and phosphorus (P) export fluxes were measured at the equator in the western and central Pacific during two 6–7 day-long time-series stations located in the warm pool (TS-I at 0°, 167°E) and in the equatorial HNLC situation (TS-II at 0°, 150°W), using drifting sediment traps deployed for 48 h at four depths (between, approximately, 100 and 300 m).The particulate organic carbon (POC) fluxes at the base of the euphotic zone (0.1 % light level), were approximately four times lower at TS-I than at TS-11 (4.1 vs. 17.0 mmol C m^-2 day^-1). Conversely, fluxes measured at 300 m were similar at both sites (3.6vs. 3.7 mmol C m⁻² day⁻¹ at TS-I and TS-11, respectively). This change in export fluxes was in good agreement with food-web dynamics in the euphotic zone characterized by an increase in plankton biomasses and metabolic rates and a shift towards larger size from TS-1 to TS-II. The POC flux profiles indicated high remineralization (up to 78%) of the exported particles at TS-II, between 100 and 200 m in the Equatorial Undercurrent. According to zooplankton ingestion estimates from 100 – 300 m, 60% of this POC loss could be accounted for by zooplankton grazing. At TS-I, no marked increase of flux with depth was observed, and we assume that loss of particles was compensated by in-situ particle production by zooplankton. Fluxes of particulate nitrogen and phosphorus followed the same general patterns as the POC fluxes. The elemental and pigment composition of the exported particles was not very different between the two stations. In particular, the POCYN flux molar ratio at the base of the euphotic zone was low, 6.9 and 6.2 at TS-1 and TS-II, respectively.For particulate inorganic carbon (mainly carbonate) flux, values at the base of the euphotic zone averaged 0.9 mmol C m-2 day-1 at TS-I and 2.3 mmol C m-2 day-1 at TS-11 (corresponding to a 2.6-fold increase) and showed low depth changes at both stations.POC export flux (including active flux associated with the interzonal migrants) at the 0.1 % light level depth represented only 8% of primary production (1°C uptake) measured at TS-1 and 19% at TS-II. For the time and space scales considered in the present study, new primary production, as measured by the 15N method, was in good agreement with the total export flux in the HNLC situation, thus leading to negligible dissolved organic carbon (DOC) or nitrogen (DON) losses from the photic zone. Conversely, export flux was found to be only 50% (C units) and 60% (N) of new production in the oligotrophic system, either because of an overestimation by the 15N method or of a significant export of DOC and DON.Comparison with other oceanic regions shows that export flux in the warm pool was within the same range as in the central gyres. On the other hand, comparison with EgPac data in the central Pacific suggests that there is no straightforward relation between the magnitude of the export and surface nitrate concentrations.     

Organic geochemistry of sediments from the continental margin off southern New England,U.S.A. — Part II. Lipids

Organic geochemical measurements of the lipid fraction, comprising saturated and aromatic hydrocarbons, fatty acids, alcohols and sterols, have been carried out on six sediment cores collected from the Atlantic shelf, slope and the rise areas to evaluate the cross-shelf transport of the organic carbon.The concentration of most of the organic compound classes studied is correlated with the total organic carbon, which decreases from the shelf through slope to the rise. Terrigenous carbon is recognizable even in the slope and rise sediments, but terrestrial influx decreases relative to marine generated lipids in the slope and rise organic matter. We estimate that ∼50% of the shelf organic matter is exported to the slope.Data of sediment trap material collected at 1200 m from 1250 m water depth are discussed and compared with that of surface sediment from 1280 m water depth (slope). Fluxes for specific organic compound classes have been computed. The fluxes are of the same magnitude as for equatorial North Atlantic trap particulates at comparable water depth, studied by other investigators.     

Planktonic foraminiferal flux to the deep ocean: Sediment trap results from the tropical Atlantic and the central Pacific

The flux of planktonic foraminifera between 100 μm and 1 mm to the seafloor has been estimated for the central Pacific (abyssal plain east of Hawaii) and the tropical Atlantic (Demerara Abyssal Plain) based on sediment trap samples collected from various water depths. The faunas in each region are quite similar, with 4 to 5 species generally accounting for 70–80% of the total assemblage.

At both study sites, the total foraminiferal flux and the carbonate flux tend to decrease with depth. In addition, the flux of individual species of planktonic foraminifera varies significantly with depth, with the number of small, solution-susceptible species decreasing with increasing water depth. These results suggest that there is significant dissolution of small (< 150 μm) foraminifera as they settle through the water column. Material collected from the sediment-water interface directly below the Pacific sediment trap array contains no planktonic foraminifera, suggesting that the residence time of an individual on the seafloor before it dissolves, is extremely short.     

Chemical studies on organic matter and carbon cycle in the ocean

Chemistry of organic materials of the suspended and sinking particles, and the evaluation of the particulate materials for the carbon cycle of the ocean are described in this paper. Organic carbon (POC) and nitrogen (PON) of the suspended particles collected from various areas of the North through South Pacific were determined with considerably high variabilities in their concentration. Higher values of the POC and PON were obtained in the surface water of the higher latitudinal areas of both northern and southern hemispheres and the equatorial Pacific, while the lower values of these organic elements were measured in the middle latitudinal areas of the Pacific. These facts clearly indicate that inorganic nutrients supply to the surface water layers from the underlying water is primarily determinative factor to govern the concentration of the POC and PON in the surface water layer. POC and PON concentrations in the intermediate through deep waters, however, are much less variable in time and space. Carbohydrates, free and combined amino acids and lipid materials were major organic constituents of the suspended particles. The organic composition of the particles was extensively variable in region, time and depth. Such change in the organic composition was mainly caused by the production and decay of the free and combined amino acids, lipid materials and water extractable carbohydrate. Sinking particle which has high sinking rate over 100 m day⁻¹ and can be collected only by sediment trap, also consists of carbohydrates, free and combined amino acids and lipid materials. A detailed analysis of the particle indicate that the sinking particle was much different from the suspended particle from the intermediate through deep waters in terms of the abundance of the biologically susceptible organic materials such as unsaturated hydrocarbon, fatty acid and water extractable carbohydrate often found in phytoplankton. These facts clearly indicate that the sinking particle plays an important role on the vertical transport of the biologically susceptible organic materials from the surface water to the deep water. Vertical flux of organic materials in various water depths was extensively measured in the North Pacific and Antarctic Ocean using the depth-series sediment trap system to collect the sinking particles from various depths of the waters. Regional and seasonal variabilities of the organic carbon flux at the various depths were obviously observed, however the attenuation rate of the organic carbon flux in the intermediate through deep water was not changed so much irrespective of the sampling time and region. The time-series sediment trap system was also using to determine the seasonal variation of the organic carbon flux. An average organic carbon flux at 1 km depth from this trap system was almost comparable to the amount of organic carbon degraded in the water deeper than 1 km depth, which was calculated from oxygen consumption rate of the deep water. Thus, it is clear that the sinking particle must play an important role in the carbon cycle of the deep water.     

Compositions and transport of lipid biomarkers through the water column and surficial sediments of the equatorial Pacific Ocean

A systematic investigation of fluxes and compositions of lipids through the water column and into sediments was conducted along the U.S. JGOFS EgPac transect from l2°N to l5°S at 140°W. Fluxes of lipids out of the euphotic zone varied spatially and temporally, ranging from ≈0.20 – 0.6 mmol lipid-C m⁻² day⁻¹. Lipid fluxes were greatly attenuated with increasing water column depth, dropping to 0.002-0.06 mmol lipid-C m⁻² day⁻¹ in deep-water sediment traps. Sediment accumulation rates for lipids were ≈ 0.0002 – 0.00003 mmol lipid-C m⁻² day⁻¹. Lipids comprised ≈ 11–23% of C_org in net-plankton, 10–30% in particles exiting the euphotic zone, 2–4% particles in the deep EgPac, and 0.1-1 % in sediments. Lipids were, in general, selectively lost due to their greater reactivity relative to bulk organic matter toward biogeochemical degradation in the water column and sediment. Qualitative changes in lipid compositions through the water column and into sediments are consistent with the reactive nature of lipids. Fatty acids were the most labile compounds, with polyunsaturated fatty acids (PUFAs) being quickly lost from particles. Branchedchain C₁₅ and C₁₇ fatty acids increased in relative abundance as particulate matter sank and was incorporated into the sediment, indicating inputs of organic matter from bacteria. Long-chain C₃₉ alkenones of marine origin and long-chain C₂₀-C₃₀ fatty acids, alcohols and hydrocarbons derived from land plants were selectively preserved in sediments. Compositional changes over time and space demonstrate the dynamic range of reactivities among individual biomarker compounds, and hence of organic matter as a whole. A thorough understanding of biogeochemical reprocessing of organic matter in the oceanic water column and sediments is, thus, essential for using the sediment record for reconstructing past oceanic environments.     

Total particulate and organic fluxes in anoxic Framvaren waters

Cylindrical sediment traps were deployed at various depths in the anoxic water of Framvaren for two periods of one year (1981–1982 and 1983–1984). The traps were emptied three times during 1981–1982 and five times during 1983–1984. The vertical fluxes of total suspended material, organic carbon and nitrogen were calculated on a daily and annual basis. The average annual sediment flux 20 m above the bottom was approximately 60 g m⁻² y⁻¹ and the flux of organic carbon was 20 g m⁻² y⁻¹. On the basis of an average C/N ratio of 8 and a constant carbon flux below a depth of 20 m, it is concluded that little mineralization of the organic matter takes place in the anoxic water column. Assuming a primary production of the order to 50–100 g m⁻² y⁻¹, 22–24% of that reaches the anoxic water masses. Further breakdown of organic matter takes place in the surface sediments.     

Downward flux of zooplankton fecal pellets in the upper 2,000 m water column of the Izu Trench,western North Pacific

Sinking particulate matter were obtained from twelve depths using free-drifting sediment trap arrays which were deployed in the upper 2,000 m water column of the Izu Trench, northwest Pacific Ocean. The largest flux of 146 mgC m^–2 day^–1 was observed at 150 m depth. The flux generally decreased with depth below the maximum, however, minor flux peaks occurred at 1,000 and 1,250 m depth (>30 mgC m^–2 day^–1). Sinking large particles (>100 µm) were composed of fecal pellets typical of crustaceans, macroscopic aggregates, and planktonic organisms and their fragments. Three major components constituted 19%, 20% and 29%, respectively, of the total carbon flux (averaged from the fluxes at five depths; 50, 100, 150, 1,000 and 2,000 m). Among them, fecal pellet flux and large organism flux were well correlated with the total flux. The close correspondence between the fecal flux and the total carbon flux suggests that the latter is derived from a group of variables including other biogenic matter, among which fecal pellet is one of the leading factors controlling total flux, though the latter is only a minor covariable in quantity. Vertical flux profiles of fecal pellets and their internal constituents revealed some new inputs of feces occurring through the water column. This phenomenon implies that downward transportation of organic material is characterized by feeding and egestion activities of zooplankton, including overlapping processes of sinking and dispersion of large fecal particles and repackaging of dispersed small particles.     

Particle flux across the mid-European continental margin

Results are presented from particle flux studies using sediment trap and current meter moorings along a transect at the European continental margin at 49°N within the EU-funded Ocean Margin Exchange (OMEX) project. Two moorings were placed, at the mid- and outer slope in water depths of 1500 and 3660 m, with traps at 600 and 1050 m and at 580, 1440 and 3220 m, respectively. Residual currents at the mid-slope follow the slope contour, whereas seasonal off-slope flow was registered at the outer slope. At 600 m on the slope fluxes are similar to those in the abyssal North Atlantic. The flux of all components (bulk dry weight, particulate organic and inorganic carbon, lithogenic matter and opal) increased with water depth. Highest fluxes were recorded at 1440 m at the outer slope, where off-slope residual currents mediate particle export. The injection of biogenic and lithogenic particles below the depth of winter mixing results in the export of particles from shallower waters. Calculated lateral fluxes of particulate organic carbon exceed the primary flux by over a factor of 2 at 1440 m on the outer slope. Estimated lateral fluxes of suspended particulate matter in the water column and intermediate nepheloid layers at the outer slope are potentially large compared to sinking fluxes measured by sediment traps. A comparison is made of particle flux at three continental margin sites and two sites in the adjacent open North Atlantic, from which it is seen that bulk and organic matter flux increases exponentially with proximity to the shelf break. The percentage contribution of particulate organic carbon to biogenic fluxes increases from a mean of 5.7% in the abyssal N. Atlantic to 13.9% at the continental margins.     

Temporal patterns among meiofauna and macrofauna taxa related to changes in sediment geochemistry at an abyssal NE Atlantic site

Two major size classes of the sediment community, meiofauna and macrofauna, and four classes of lipid compounds, fatty acids, alkanes, alcohols and sterols, were investigated using multicorer and USNEL boxcorer samples, collected during six cruises over a two year period (September 1996 to September–October 1998), at the Porcupine Abyssal Plain ( 48° 50′N 16° 30′W, 4850 m depth) within the framework of the MAST 3 BENGAL project. This site was known to be subject to seasonality in the input of organic matter to the seafloor. Results are given for each faunal size class in terms of taxonomic structure at the level of phylum, class or order, depending on the taxon, and for the dominant faunal components in terms of density and vertical distribution. For each lipid compound class, results are given in concentration and vertical distribution. The taxonomic structure of each size class did not change within the study period. Total meiofaunal and macrofaunal densities were particularly high, probably reflecting the high quantity and quality of organic matter inputs to the site. The dominant components of the two size classes presented different temporal patterns in their responses to changes in their environment. Populations of meiofaunal species, a foraminiferan and an opheliid polychaete, which inhabit the surface or sub-surface of sediment and feed on phytodetritus, responded with a rapid increase in abundance to a pulse of organic input in summer 1996. The macrofaunal polychaetes showed a lagged response to the same event by slowly increasing in density. Other components of the sediment community, that can live deeper in the sediment, moved down the sediment column, in response to 1) the impoverishment and bioturbation of the surface layer, and 2) the downward mixing of organic matter in the sediment by larger organisms. In this study, different temporal patterns were demonstrated for the first time in different size classes of the sediment community, and in the biological and environmental parameters that were studied simultaneously.     

Seasonal variations in faunal distribution and activity across the continental slope of the goban spur area (NE Atlantic)

Density, biomass and community structure of macrofauna were estimated together with several sediment characteristics at seven stations ranging from 208 m to 4460 m water depth along the OMEX transect in the Goban Spur area (NE Atlantic) during three seasons (October 1993, May 1994, and August 1995). Median grain size decreased with increasing water depth and showed no differences between the seasons. The percentages of organic carbon and total nitrogen were highest at mid-slope depths (1000 to 1500 m), and were significantly higher in August at the upper part of the slope to a depth of 1500 m. The C:N ratio in the surface layer amounted to 7 to 8 in May, 10 to 12 in August and 14 to 17 in October at all stations (except the deepest at 4460 m, where it was 11 in May and August), indicating arrival of fresh phytodetritus in May, and therefore seasonality in food input to the benthos. Densities of macrofauna decreased exponentially with increasing water depth. Significantly higher densities of macrofauna were found in May at the upper part of the slope to a depth of 1500 m. These differences were mainly due to high numbers of postlarvae of echinoids at the shallowest station and ophiuroids at the deeper stations. Biomass values also decreased with increasing water depth, but biomass was relatively high at the 1000 m station and low at 1500 m, due to relatively high and low mean weights of the individual macrofaunal specimens. No significant differences in biomass were found between the seasons. Respiration was high (15 to 20 mgC·m⁻²·d⁻¹) in May at the upper part of the slope to a depth of 1000 m and low (1–3 mg C·m⁻²·d⁻¹) at the deeper part. At the shallowest stations to a depth of 1000 m respiration was highest in May, at the mid-slope stations (1400–2200 m) it was highest in August, whereas the deepest stations (3600 to 4500 m) did not show any differences in respiration rates. In conclusion; seasonal variation in organic input is reflected in denstiy, community structure and activity of the macrofauna along the continental slope in the NE Atlantic.     

Fluxes of amino acids and hexosamines to the deep South China Sea

Settling particles collected by sediment traps deployed between 1987 and 1999 in the northern, central and southwestern South China Sea (SCS) were analysed to study seasonal, interannual and spatial variations in the composition and flux of labile particulate matter. Results were combined with remote-sensing and surface-sediment data in order to describe the factors controlling the preservation of organic matter en route from the upper ocean to the seafloor. Organic carbon, amino acid and hexosamine fluxes generally follow the fluxes of total particulate matter, with maxima during the SW and NE monsoon periods. During non-El Niño conditions spectral amino acid distributions show that degradation of organic matter in the water column decreases as the flux rates increase. This is suggested to be the combined result of enhanced primary productivity, greater input of lithogenics serving as ballast to increase settling rates, and sorption of labile components to clay minerals. During El Niño conditions, in contrast, the degree of organic matter degradation is at very high and comparable levels at all trap sites. Flux component seasonality is strongly reduced except for the coastal upwelling areas, particularly off central Vietnam, which show significantly higher fluxes of organic carbon and lithogenic matter as compared to the open SCS. This suggests that the fluxes are affected by lateral advection of reworked organic matter from riverine sources or resuspended sediments from the nearby shelf/slope. Comparison of the measured organic carbon fluxes in 1200 m depth with those accumulating in surface sediments results in a more than 80% loss of organic matter before final burial in the sediments. The degree of organic matter preservation in the surface sediments of the deep SCS is distinctly lower than in other monsoonal oceans. This may be due to varying lithogenic input and almost complete dissolution of protective biogenic mineral matrices at greater water depth.     

Downward fluxes of settling particles in the deep Cretan Sea (NE Mediterranean)

During the CINCS project (Pelagic–benthic Coupling IN the oligotrophic Cretan Sea—NE Mediterranean), a single mooring with two sediment traps (at 200 and 1515m water depth) and two current meters was deployed in the southern Cretan Sea margin at a depth of 1550 m. A second mooring deployed at the 500 m station was lost, as a result of fishing activities. The duration of the study was 12 months (November 1994 to November 1995) with sampling intervals of 15 or 16 days. The traps were retrieved, serviced and the sedimented material was collected every 6 months. In total, 48 samples were collected (24 from each trap) throughout the study period and fluxes of total particulate mass, opal, organic matter, carbonates, and lithogenic component were measured. Natural radionuclides (²¹⁰Po and ²¹⁰Pb) were determined for all trap samples. Total mass flux and the fluxes of four major constituents increased with depth, the total mass flux reaching values of nearly 550 mg m⁻² d⁻¹ at 1515 m and 187 mg m⁻² d⁻¹ at 200 m depth, following the same patterns observed in other experiments (ECOMARGE, SEEP-I, SEEP-II). The mean annual mass fluxes were 209 and 49.8 mg m⁻² d⁻¹ at the near bottom and near surface trap respectively. This suggests that lateral transport of particulate matter is of importance in the area. Total mass fluxes at the two depths were characterized by different seasonal fluctuations, although a general decreasing trend was observed from the I (winter) to the II (summer) deployment at both depths. This was mainly a result of reductions in aluminosilicate inputs during the summer dry period. At 200 m depth carbonates were more important during winter, because of a large carbonate input consisting mainly of coccoliths of Emiliania huxleyi, while during the summer decreased fluxes of carbonates and aluminosilicates resulted in a reduction of the mass flux. In contrast, at 1515 m depth the lithogenic component was the dominant component during the winter deployment, indicating a terrigenous input. During the summer period the decrease in mass flux was strongly effected by the decrease in aluminosilicates. There was a diminution in the organic carbon content with a concomitant increase in total mass flux, which, together with the almost negligible increase in the annual ²¹⁰Pb activity with depth and the increase of ²¹⁰Po activity with depth could be interpreted as indicating a contribution of resuspended material to the input at 1515 m. The complex mesoscale circulation of the Cretan Sea, consisting of a cyclone (east)–anticyclone (west) system, controls particle transfer in the area. This hydrodynamic system seems to move water masses towards the southern Cretan Sea margin, and consequently carry materials from the open sea to the upper slope and shelf.     

Seamounts and organic matter—Is there an effect? The case of Sedlo and Seine seamounts,Part 2. Composition of suspended particulate organic matter

The suspended particulate organic matter (sPOM) around two isolated NE Atlantic seamounts, Seine (33°46′N 14°21′W; summit at ∼170 m) and Sedlo (40°19′N 26°40′W; summit at ∼780 m), was studied over a period of 2 years during four 2–4-week oceanographic surveys. Elemental (C and N), chlorophyll a and lipid biomarker concentrations and N stable isotopic values were variable close to the surface (40–90 m), although some chlorophyll a enrichment above the summits was discerned sporadically. Results from near-surface waters showed a generally “fresh”, mainly phytoplankton signature in sPOM with some seasonality, which was more pronounced around Sedlo. sPOM concentrations and composition changed with depth, apparently controlled by seasonality and proximity to the seamounts. A few metres above the Seine summit, the suspended particulate organic carbon (sPOC) concentrations and labile polyunsaturated fatty acids (% of lipids) were higher than elsewhere at similar depths (∼200 m) in summer 2004. In the same season at Sedlo, polyunsaturated fatty acids were also relatively more abundant (up to 43% of total lipids) around the topographic feature throughout the water column, indicating supply of more labile sPOM, perhaps by advection, downwelling or passive sinking of locally produced phytoplankton and/or in situ production. The high-quality sPOM that seems to be present around the seamounts could provide an important food source to the biological community.     

Lipid and 13C signatures of submicron and suspended particulate organic matter in the Eastern Tropical North Pacific: Implications for the contribution of Bacteria

The contribution of bacterial biomass to total particulate organic matter (POM) in the ocean, including exported material, is poorly constrained. To examine potential signatures for the presence and export of bacterioplankton and their detrital remains, here we provide a detailed compound-specific ¹³C characterization of fatty acids from membrane polar lipids obtained from a water column profile in the Eastern Tropical North Pacific. POM of submicron size (0.2–0.7 μm; “X-POM”) was sampled and analyzed separately from the size class typically collected as “suspended” POM (0.7–53 μm; “L-POM”). The distributions of polar head group classes, specific fatty acid side chains, and natural ¹³C contents all vary, both between particle size classes and with depth in the water column. In general, the polar lipids in submicron material – and by inference, lipids of bacterial origin – have higher ¹³C content than polar lipids from larger POM and are equally abundant. Lipid signatures from the photic zone appear to be partially conserved in the suspended pool during transit down the water column. However, bacterial heterotrophy and possibly chemoautotrophy partially overprint these surface signatures. In addition, active metabolisms in the oxygen minimum zone (OMZ) appear to mediate the disaggregation of POM transported from the surface, thus adding complexity to the pathways of mid-water carbon flux and providing additional organic substrates to the OMZ and below. This “substrate injection” may provide important fuel for the denitrification and anammox reactions. Finally, examination of ¹³C content in polar lipids provides a basis for new interpretation of depth-related variations in δ¹³C values of bulk suspended POM.     

Temporal variations in the concentration and settling flux of carbon and phytoplankton pigments in a deep fjordlike estuary

The weekly mass flux of C and phytoplankton pigments at five depths in the main basin of Puget Sound, a deep (200 m) fjordlike estuary, was sampled for a year with moored sequentially-sampling sediment traps. Flux measurements were compared with weekly samples of suspended pigments in the euphotic zone and bi-monthly samples of total suspended matter and particulate C throughout the water column at the mooring site.Seasonal changes in the total mass flux at all depths were small; instead, physical (river runoff, bottom resuspension) and biological (phytoplankton blooms) events caused occasional sharp increases on a weekly scale. The dry weight concentration of pigments in the trap samples mirrored the concentration of pigments in the euphotic zone suspended matter, increasing from 0·01% in winter to a maximum of 0·65% in late summer. Bloom-induced changes in the pigment concentration were observed almost simultaneously in the euphotic zone and in the traps to a depth of 160 m, indicating a rapid vertical transfer of surface-originating particles by organic aggregates. In contrast to the strong seasonal signal in the pigment concentration, C concentration varied by only a factor of three during the year.The seasonal trend of C/pigment ratios in the C flux arises from at least two sources: (1) a balance between terrestrial sources of C during the high-runoff winter season and in-situ primary production in spring and summer, and (2) cycling of C through the zooplankton population. Budget calculations suggest that the loss of primary-produced C and pigment from the euphotic zone by settling is 5% regardless of season. On an annual basis, this C flux (16 g m⁻²) is sufficient to support previously measured values of benthic aerobic respiration at the mooring site. To account for other C sinks such as burial, predation and chemical oxidation, however, terrestrial C sources and alternate transport pathways, such as vertical advection and sediment movement down the steep basin walls, are necessary.     

Potential source and diagenetic signatures of oceanic dissolved and particulate organic matter as distinguished by lipid biomarker distributions

Potential biogenic sources of ultrafiltered dissolved and suspended particulate organic matter (UDOM and POM, respectively) from the Sargasso Sea (SS) and North Central Pacific (NCP) Ocean were investigated using lipid biomarker compounds. Organic carbon (OC) concentrations were ~ 20–40 times greater in UDOM than POM and decreased with depth. However, total OC-normalized lipid concentrations were 2–3 orders of magnitude higher in POM than in UDOM. Particulate total lipids decreased 3–10-fold with depth, compared to 10–20% for dissolved total lipids. Total fatty acids (FA), the most abundant lipids, showed similar patterns as total lipids, comprising ~ 62–88% of the total lipids analyzed in UDOM and ~ 57–84% in POM.FA were dominated by straight-chain saturated compounds followed by monounsaturated, polyunsaturated, and branched FA. Polyunsaturated FA were enriched in POM vs. UDOM and in surface vs. deep waters for both UDOM and POM, likely reflecting the algal origins and greater reactivity of surface-derived materials. In both UDOM and POM, sterols of planktonic origin dominated, including cholest-5-en-3β-ol (C₂₇Δ⁵), 24-methylcholesta-5,24(28)E-dien-3β-ol (C₂₈Δ^5,24(28)) and 24-ethylcholest-5-3β-ol (C₂₉Δ⁵), with varying contributions from cholesta-5,22E-3β-ol (C₂₇Δ^5,22), 24-methylcholesta-5,22E-3β-ol (C₂₈Δ^5,22) and 24-ethylcholesta-5,22E-3β-ol (C₂₉Δ^5,22).Factor analysis of lipid biomarkers showed major differences between the UDOM and POM pools and for each pool as a function of depth, but not between the SS and NCP. While UDOM and POM biomarkers were both dominated by autochthonous sources, differences between the two pools suggest potential effects from some combination of source and diagenetic factors. The lipid biomarker data are further evaluated relative to previous studies of radiocarbon (¹⁴C) and elemental (C:N:P) characteristics of UDOM and POM in the SS and NCP.     

Organic sedimentation in the water column in the Arabian Sea: Relationship between the lipid composition of small and large-size,surface and deep particles

Small and large-size particulates (>50 μm) have been collected during the ORGON IV cruise in the Arabian Sea (North-western Indian Ocean), using conventional metallic bottles and vertical near-surface (200-0 m) and deep (below 1000 m) plankton nets. This area presents remarkable conditions for studying organic sedimentation: a high superficial productivity, low oxygen content of seawater and low terrigenous inputs.Lipids have been quantified and analysed by gas-liquid chromatography and gas-liquid chromatography/mass spectrometry for fatty acids, saturated hydrocarbons and sterols. The distribution of biological species, size range and biological nature have been determined through microscopic examination.Principal results are presented in a geochemical context: small and large-size particles belong to two different reservoirs both for concentrations and chemical compositions.The comparison between the size range of particles and chemical characteristics observed through analyses of net and bottle samples emphasizes the importance of large-size particles in the geochemical process of material transfer between surface and sediment. For various lipids, this transfer concerns freshly biosynthesized molecules such as long-chain polyunsaturated fatty acids, pristane and sterols, compounds which are of high metabolic value for abyssal and pelagic organisms.The lipid fluxes, determined from in situ concentrations, and settling velocity estimated from the size range of deep particulate material, are compared to those reported by different authors using other sampling procedures for deep settling matter.