Hydrology, circulation and distribution of particulate matter in Thermaikos Gulf (NW Aegean Sea), during September 2001–October 2001 and February 2002

The hydrography, circulation and distribution of particulate matter in Thermaikos Gulf (NW Aegean Sea) are described, for September 2001 and October 2001 and February 2002. The observations were obtained to assess the impact of anthropogenic and natural resuspension processes on the coastal ecosystem. The first two periods represent highly stratified conditions and mild weather conditions; in September trawling is prohibited, whilst the October cruise took place following the commencement of the activity. The sampling in February was undertaken to record the contribution of natural resuspension to the system, in a stormy period.The water circulation was mainly baroclinic during autumn and barotropic in winter; this was due to vertical homogenisation of the water column, during the latter period. The distribution of the bottom nepheloid layer (BNL) was very different in the winter than in the autumn.Microstructure measurements were undertaken, which allowed the vertical eddy diffusivity to be estimated, together with the near-bed shear stresses. Computation of the diffusive flux of particulate matter (PM), from the BNL into the intermediate water column in response to turbulent motions, reveals that the PM flux was much higher in October than in September; this is despite the fact that the friction velocities were similar. This observation could explain partly the observed higher PM concentrations (PMC) in the intermediate layer, in October. Likewise suggest that the higher PMC in October could be attributed to trawling. The limited shear stress and friction velocity values obtained during the September and October cruises were always low; these were possibly capable of resuspending only recently deposited, “fluffy” material. Thus, the observed nepheloid layers are likely to be maintained by advection from the shallow water regions and trawled areas.     

In situ record of sedimentary processes near the Rhône River mouth during winter events (Gulf of Lions,Mediterranean Sea)

The environment is impacted by natural and anthropogenic disturbances that occur at different spatial and temporal scales, and that lead to major changes and even disequilibria when exceeding the resiliency capacities of the ecosystem. With an annual mean flow of 1700 m³ s⁻¹, the Rhône River is the largest of the western Mediterranean basin. Its annual solid discharges vary between 2 and 20 Mt, with flood events responsible for more than 70% of these amounts.     

Process-oriented modeling studies of the 5500-km-long boundary flow off western and southern Australia

While the unique character of the coastal current system off the western and southern coasts of Australia has been recognized, this vast 5500-km-long boundary flow has been studied far less than other current systems of the world. Recent observational studies from satellite altimetry and climatology are consistent with a continuous current extending from its origin at the North West Cape to the southern tip of Tasmania. To date, coastal modeling studies have focused on either the western Australian coast to Esperance or on southern Australia. There has been no process-oriented modeling study of the entire region that would allow the systematic exploration of the two independent forcing mechanisms (i.e., wind-forcing and thermohaline gradients) and their interactions that have been noted to act in a synergistic manner to maintain the longest continuous coastal current system in the world.     

In situ oxygen uptake rates by coastal sediments under the influence of the Rhône River (NW Mediterranean Sea)

The influence of riverine inputs on biogeochemical cycling and organic matter recycling in sediments on the continental shelf off the Rhône River mouth (NW Mediterranean Sea) was investigated by measuring sediment oxygen uptake rates using a combination of in situ and laboratory techniques. Four stations were investigated during two cruises in June 2001 and June 2002, with depths ranging from 9 to 192 m and over a distance to the Rhône River mouth ranging from 4 to 36 km. Diffusive oxygen uptake (DOU) rates were determined using an in situ sediment microprofiler and total oxygen uptake (TOU) rates were measured using sediment core incubations. There was good agreement between these two techniques which indicates that the non-diffusive fraction of the oxygen flux was minimal at the investigated stations. DOU rates ranged from 3.7±0.4 mmol O₂ m⁻² d⁻¹ at the continental shelf break to 19.3±0.5 mmol O₂ m⁻² d⁻¹ in front of the Rhône River mouth. Sediment oxygen uptake rates mostly decreased with increasing depth and with distance from the Rhône mouth. The highest oxygen uptake rate was observed at 63 m on the Rhône prodelta, corresponding to intense remineralization of organic matter. This oxygen uptake rate was much larger than expected for the increasing bathymetry, which indicates that biogeochemical cycles and benthic deposition are largely influenced by the Rhône River inputs. This functioning was also supported by the detailed spatial distribution of total organic carbon (TOC), total nitrogen (TN) and C/N atomic ratio in surficial sediments. Sediments of the Rhône prodelta are enriched in organic carbon (2–2.2%) relative to the continental shelf sediments (<1%) and showed C/N ratios exceeding Redfield stoichiometry for fresh marine organic matter. A positive exponential correlation was found between DOU and TOC contents (r²=0.98, n=4). South-westward of the Rhône River mouth, sediments contained highly degraded organic matter of both terrestrial and marine origin, due to direct inputs from the Rhône River, sedimentation of marine organic matter and organic material redeposition after resuspension events.     

Monitoring the physical forcing of resuspension events in the Thermaikos Gulf—NW Aegean during 2001–2003

This work constitutes an attempt to assess the relative importance of natural versus anthropogenic forcing for sediment resuspension on the shelf of the Thermaikos Gulf (NW Aegean) through a 2-year experiment in the framework of the E.U. project INTERPOL. Four periods of different hydrographic characteristics were identified, including two periods of stronger vertical homogenisation and two of stratified conditions. The former periods were characterized by stronger near-bed currents, while relatively weak internal wave motions dominated the periods of stratification. The near-bed currents showed strong coherence with the wind during the period of full homogenisation, whereas during stratification periods the wind provided indirect forcing evident mostly in the internal-wave bands. The site was too deep for the surface waves to cause any sediment resuspension. In conclusion, the observed near-bed currents at the site of interest did not appear to produce significant local resuspension of sediment; notably, the current-turbidity correlation suggested a shoreward transport of suspended material. The large-scale turbidity variability was rather related to the onset of the trawling period in mid-October 2001 and the increased riverine discharge in late summer/autumn 2002.     

Hydrodynamic modelling of mesoscale eddies in the Black Sea

A three dimensional structure of mesoscale circulation in the Black Sea is simulated using the Proudman Oceanographic Laboratory Coastal Ocean Modelling System. A number of sensitivity tests reveal the response of the model to changes in the horizontal resolution, time steps, and diffusion coefficients. Three numerical grids are examined with x-fine (3.2 km), fine (6.7 km) and coarse (25 km) resolution. It is found that the coarse grid significantly overestimates the energy of the currents and is not adequate even for the study of basin-scale circulation. The x-fine grid, on the other hand, does not give significant advantages compared to the fine grid, and the latter is used for the bulk of simulations. The most adequate parameters are chosen from the sensitivity study and used to model both the basin-scale circulation and day-to-day variability of mesoscale currents for the months of May and June of 2000. The model is forced with actual wind data every 6 h and monthly climatic data for evaporation, precipitation, heat fluxes and river run-off. The results of the fine grid model are compared favourably against the satellite imagery. The model adequately reproduces the general circulation and many mesoscale features including cyclonic and anticyclonic eddies, jets and filaments in different parts of the Black Sea. The model gives a realistic geographical distribution and parameters of mesoscale currents, such as size, shape and evolution of the eddies.     

Dense water generation on a shelf: the case of the Adriatic Sea

The paper overviews recent and past studies of preconditioning, generation and spreading of North Adriatic Dense Water (NAdDW), by analysing both transient episodes and climatological data. The importance of wind stress, heat and water fluxes, and particularly river discharges during the preconditioning and generative period is emphasized, as well as the advection of saline levantine intermediate water from the southeast. After the generation, NAdDW affects deep and bottom layers of the middle and south Adriatic Sea, flowing as a dense current and mixing with the adjacent waters; it can be traced even in the Otranto Strait, contributing to the formation of deep water in the Eastern Mediterranean. Objective shortcomings and the projections in NAdDW investigations are also discussed, due to their high importance in the circulation of the Adriatic Sea, which may relate other similar basins around the world.     

Comparison between satellite and in situ sea surface temperature data in the Western Mediterranean Sea

A comparison between in situ and satellite sea surface temperature (SST) is presented for the Western Mediterranean Sea during 1999. Several international databases are used to extract in situ data (World Ocean Database, MEDAR/Medatlas, Coriolis Data Center, International Council for the Exploration of the Sea and International Comprehensive Ocean-Atmosphere Data Set). The in situ data are classified into different platforms or sensors (conductivity–temperature–depth, expendable bathythermographs, drifters, bottles, and ships), in order to assess the relative accuracy of these type of data with respect to Advanced Very High Resolution Radiometer SST satellite data. It is shown that the results of the error assessment vary with the sensor type, the depth of the in situ measurements, and the database used. Ship data are the most heterogeneous data set, and therefore present the largest differences with respect to in situ data. A cold bias is detected in drifter data. The differences between satellite and in situ data are not normally distributed. However, several analysis techniques, as merging and data assimilation, usually require Gaussian-distributed errors. The statistics obtained during this study will be used in future work to merge the in situ and satellite data sets into one unique estimation of the SST.     

Hydrodynamics and sediment dynamics in the German Bight. A focus on observations and numerical modelling in the East Frisian Wadden Sea

This work deals with analysis of hydrographic observations and results of numerical simulations. The data base includes acoustic Doppler current profilers (ADCP) observations, continuous measurements on data stations and satellite data originating from the medium resolution imaging spectrometer (MERIS) onboard the European Space Agency (ESA) satellite ENVISAT with a spatial resolution of 300 m. Numerical simulations use nested models with horizontal resolutions ranging from 1 km in the German Bight to 200 m in the East Frisian Wadden Sea coupled with a suspended matter transport model. Modern satellite observations have now a comparable horizontal resolution with high-resolution numerical model of the entire area of the East Frisian Wadden Sea allowing to describe and validate new and so far unknown patterns of sediment distribution. The two data sets are consistent and reveal an oscillatory behaviour of sediment pools to the north of the back-barrier basins and clear propagation patterns of tidally driven suspended particulate matter outflow into the North Sea. The good agreement between observations and simulations is convincing evidence that the model simulates the basic dynamics and sediment transport processes, which motivates its further use in hindcasting, as well as in the initial steps towards forecasting circulation and sediment dynamics in the coastal zone.     

Analytical modelling of wintertime coastal jets in the Adriatic Sea

Two diagnostic models, reproducing circulation generated in a marginal sea by variable density, have been developed. The models’ domain is a 2D transverse section for which analytical solutions have been obtained. They describe the winter situation in the northern Adriatic, with a strong vertical mixing present and the density maximum dominating the centre of the basin. Both models employ Boussinesq-type parametrisation of friction and linear slip at the bottom. The first model allows for frictional departure from hydrostatic equilibrium and includes vertical friction only. The second one is hydrostatic but allows for lateral friction as well. The results obtained by the two models are similar and to some extent dependent on the vertical and bottom friction. They reproduce several well known characteristics of the Adriatic circulation (cyclonic surface flow, downwelling in the central and larger part of the basin compensated by upwelling in the coastal zone) but also predict some phenomena that are still not well understood. A conspicuous feature of the model results are coastal jets, which were observed in the Adriatic on several occasions. The present models show that the distance of jets from the coasts depends on lateral friction: it is found to vary from 1 up to 10 km on the Italian side and between 2 and 15 km on the Croatian side. Both models reproduce the west–east asymmetry, with the wider current on the east side of the basin. The asymmetry is a subject on which conflicting empirical results exist in the Adriatic. In the two models cyclonic flow occupies the whole water column, which disagrees with some recent theoretical findings of the near-bottom anticyclonic flow and thus leaves the issue open.     

Near-inertial motions in and around the Palamós submarine canyon (NW Mediterranean) generated by a severe storm

During 9–16 November 2001 the western Mediterranean Sea was lashed by one of the most extreme storms of the last decades. Current meter data from seven moorings in the Palamós submarine canyon (northwestern Mediterranean) are analyzed to understand the vertical propagation of near-inertial energy generated by the storm. The daily inertial rotary components are examined for evidence of free and forced near-inertial oscillations. Free near-inertial motions are increased during the storm, although they are larger outside the canyon than inside. Conversely, forced near-inertial motions are relatively large inside the canyon but are almost negligible outside. Based on the results of a three-dimensional ocean circulation model, these differences are shown to be caused by the presence of a storm-generated alongshore front. The mechanisms by which near-inertial energy propagates are distinct at each side of the front. On the onshore side of the front (inside the canyon), free near-inertial motions are rapidly carried away by normal inertial waves, and wave reflection off canyon wall is responsible for the dissipation of free near-inertial motions and enhancement of forced near-inertial motions. On the offshore side of the front (outside the canyon), on the other hand, free near-inertial motions propagates first downward with anomalously low frequency internal waves and are then advected southward and offshore by the mean flow.     

Suspended sediment transport in the Gulf of Lions (NW Mediterranean): Impact of extreme storms and floods

In situ observations were combined with 3D modeling to gain understanding of and to quantify the suspended sediment transport in the Gulf of Lions (NW Mediterranean Sea). The outputs of a hydrodynamic–sediment transport coupled model were compared to near-bottom current and suspended sediment concentration measurements collected at the head of seven submarine canyons and at a shallow shelf site, over a 6-month period (November 2003–May 2004). The comparisons provide a reasonable validation of the model that reproduces the observed spatial and time variations. The study period was marked by an unusual occurrence of marine storms and high river inputs. The major water and sediment discharges were supplied by the Rhone, the largest Mediterranean river, during an exceptional flood accompanying a severe marine storm in early December 2003. A second major storm, with moderate flooding, occurred in February 2004. The estimate of river input during the studied period was 5.9 Mt. Our study reveals (i) that most of the particulate matter delivered by the Rhone was entrapped on the prodelta, and (ii) that marine storms played a crucial role on the sediment dispersal on the shelf and the off-shelf export. The marine storms occurring in early December 2003 and late February 2004 resuspended a very large amount of shelf sediment (>8 Mt). Erosion was controlled by waves on the inner shelf and by energetic currents on the outer shelf. Sediment deposition took place in the middle part of the shelf, between 50 and 100 m depth. Resuspended sediments and river-borne particles were transported to the southwestern end of the shelf by a cyclonic circulation induced by these onshore winds and exported towards the Catalan shelf and into the Cap de Creus Canyon which incises the slope close to the shore. Export taking place mostly during marine storms was estimated to reach 9.1 Mt during the study period.     

Modelling ice conditions in the easternmost Gulf of Finland in the Baltic Sea

To model ice conditions in the eastern Gulf of Finland, a high-resolution three-dimensional hydrodynamic model is coupled with the advanced sea-ice model HELMI (Haapala et al., 2005). To test the model in extreme situations, the ice pattern in the eastern Gulf of Finland was simulated for a mild ice winter (2007–2008) and for a moderate one (2003–2004). The reference runs were performed on the assumption that the ice in the model domain is fast ice if the sea depth is less than 10 m. Using this assumption, the ice thickness averaged over the Neva Bay (the easternmost part of the Gulf of Finland) is overestimated by the model for almost the entire wintertime in the mild winter and during the ice formation and melting periods in the moderate winter, as compared with the thickness reported in ice charts.     

Coastal and shelf circulation in the vicinity of Camamu Bay (14°S), Eastern Brazilian Shelf

The Camamu Bay (CMB) is located on the narrowest shelf along the South American coastline and close to the formation of two major Western Boundary Currents (WBC), the Brazil/North Brazil Current (BC/NBC). These WBC flow close to the shelf break/slope region and are expected to interact with the shelf currents due to the narrowness of the shelf. The shelf circulation is investigated in terms of current variability based on an original data set covering the 2002-2003 austral summer and the 2003 austral autumn. The Results show that the currents at the shelf are mainly wind driven, experiencing a complete reversal between seasons due to a similar change in the wind field. Currents at the inner-shelf have a polarized nature, with the alongshore velocity mostly driven by forcings at the sub-inertial frequency band and the cross-shore velocity mainly supra-inertially forced, with the tidal currents playing an important role at this direction. The contribution of the forcing mechanisms at the mid-shelf changes between seasons. During the summer, forcings in the two frequency bands are important to drive the currents with a similar contribution of the tidal currents. On the other hand, during the autumn season, the alongshore velocity is mostly driven by sub-inertial forcings and tidally driven currents still remain important in both directions. Moreover, during the autumn when the stratification is weaker, the response of the shelf currents to the wind forcing presents a barotropic signature. The meso-scale processes related to the WBC flowing at the shelf/slope region also affect the circulation within the shelf, which contribute to cause significant current reversals during the autumn season. Currents at the shelf-estuary connection are clearly supra-inertially forced with the tidal currents playing a key role in the generation of the along-channel velocities. The sub-inertial forcings at this location act mainly to drive the weak ebb currents which were highly correlated with both local and remote wind forcing during the summer season.     

Esterase activities and lipid peroxidation levels in offshore commercial species of the NW Mediterranean Sea

There is a lack of information on monitoring neurotoxicity in offshore commercial species. To help fill this gap, we sampled hake (Merluccius merluccius) and Norway lobster (Nephrops norvegicus) in fishing grounds off the coast of l’Ametlla de Mar (NW Mediterranean) in June 2005 at a depth of 100 m and 400 m. Additionally, at 400 m depth, two other fish species, Micromesistius poutassou and Phycis blennoides were included. Neurotoxicity markers such as Colinesterases (ChEs), namely acethyl- (AChE), butyryl- (BChE), propionyl- (PrChE) and carboxilesterase (CbE) were measured in muscle. Lipid peroxidation (LP), a marker of oxidative damage, was also included. The results are discussed in relation to the animal’s sex, size and fishing depth. A comparison of esterases and LP levels between muscle and liver of hake and between muscle and hepatopancreas of Norway Lobster was made.

AChE was dominant in muscle and CbE in hepatopancreas. No differences between fish species were seen for AChE. However, N. norvegicus, presented lower levels of ChEs and LP. A size-dependence in ChEs was seen for M. merluccius, with larger animals showing significantly lower activities (p < 0.05). Sex-dependence was seen in N. norvegicus for most esterases, except AChE, with males displaying higher activities (p < 0.05). A sampling-depth effect was also seen in the crustacea, with animals from 100 m generally presenting lower esterase activities and higher LP levels.     

Badlands as a hot spot of petrogenic contribution to riverine particulate organic carbon to the Gulf of Lion (NW Mediterranean Sea)

Determining the riverine carbon fluxes to oceans is critical for an improved understanding of C budgets and biogeochemical cycles (C, O) over a broad range of spatial and time scales. Among the particulate organic carbon (POC) involved in these fluxes, those yielded by sedimentary rocks (petrogenic POC: pPOC) remain somewhat uncertain as to their source on continental surfaces. Based on time series from long‐term observatories, we refine the POC and sediments flux of the Rhône River, one of the major tributaries to the Mediterranean Sea. Radiocarbon measurements on a set of riverine samples and forward modelling were used to (i) determine a modelled pPOC content and pPOC/POC ratio for each sample set, (ii) assess pPOC flux delivered to the NW Mediterranean Sea, and (iii) estimate the badlands contribution from the Durance catchment to both the pPOC and to sediment discharges. The weighted pPOC flux contributes up to 26% of the POC flux (145 Gg yr^‐1) discharged into the Mediterranean Sea, whereas the weighted pPOC content reaches 0.31 wt%. Despite their low contributive surface area (0.2%), badlands provide, respectively, 12, 3.5 and 14% of the pPOC, POC and sediment fluxes to the Rhône River. Consequently, such rocks can be considered as a major source of pPOC and sediments for the NW Mediterranean Sea and potentially for oceans. We suggest that river‐dominated ocean margins, such as the Rhône River, with badlands in their catchment could export a significant amount of pPOC to the oceans. Copyright © 2018 John Wiley & Sons, Ltd.     

Numerical modelling of the suspended sediment transport in Torres Strait

One-dimensional vertical and three-dimensional fine-resolution numerical models of sediment transport have been developed and applied to the Torres Strait region of northern Australia. The one-dimensional model, driven by measured waves and currents, was calibrated against measured suspended sediment concentrations using a sequential data assimilation algorithm. The algorithm produced a good match between model and data, but this was achieved only by allowing some temporal variability in parameter values, suggesting that there were underlying uncertainties in the model structure and forcing data. Implications of the assimilation results to the accuracy of the numerical modelling are discussed and the need for observational programmes having an extensive spatial and temporal coverage is highlighted. The three-dimensional sediment model, driven by modelled waves and currents, simulates sediment transport over the shelf during the monsoon and trade-wind seasons covering 1997–2000. The model predicts strong seasonal variability of the sediment transport on the shelf attributed to seasonally varying hydrodynamics, and illustrates significant inter-annual variability of the sediment fluxes driven by extreme events. The developed model provides a platform for testing scientific hypothesis. With additional calibration, including uncertainty analysis, it can also be used in a management context.     

Seasonal dynamics and stoichiometry of the planktonic community in the NW Mediterranean Sea: a 3D modeling approach

The 3D hydrodynamic Model for Applications at Regional Scale (MARS3D) was coupled with a biogeochemical model developed with the Ecological Modular Mechanistic Modelling (Eco3M) numerical tool. The three-dimensional coupled model was applied to the NW Mediterranean Sea to study the dynamics of the key biogeochemical processes in the area in relation with hydrodynamic constraints. In particular, we focused on the temporal and spatial variability of intracellular contents of living and non-living compartments. The conceptual scheme of the biogeochemical model accounts for the complex food web of the NW Mediterranean Sea (34 state variables), using flexible plankton stoichiometry. We used mechanistic formulations to describe most of the biogeochemical processes involved in the dynamics of marine pelagic ecosystems. Simulations covered the period from September 1, 2009 to January 31, 2011 (17 months), which enabled comparison of model outputs with situ measurements made during two oceanographic cruises in the region (Costeau-4: April 27–May 2, 2010 and Costeau-6: January 23–January 27, 2011).     

Seismic driven probabilistic classification of reservoir facies for static reservoir modelling: a case history in the Barents Sea

In this paper we present a case history of seismic reservoir characterization where we estimate the probability of facies from seismic data and simulate a set of reservoir models honouring seismically‐derived probabilistic information. In appraisal and development phases, seismic data have a key role in reservoir characterization and static reservoir modelling, as in most of the cases seismic data are the only information available far away from the wells. However seismic data do not provide any direct measurements of reservoir properties, which have then to be estimated as a solution of a joint inverse problem. For this reason, we show the application of a complete workflow for static reservoir modelling where seismic data are integrated to derive probability volumes of facies and reservoir properties to condition reservoir geostatistical simulations. The studied case is a clastic reservoir in the Barents Sea, where a complete data set of well logs from five wells and a set of partial‐stacked seismic data are available. The multi‐property workflow is based on seismic inversion, petrophysics and rock physics modelling. In particular, log‐facies are defined on the basis of sedimentological information, petrophysical properties and also their elastic response. The link between petrophysical and elastic attributes is preserved by introducing a rock‐physics model in the inversion methodology. Finally, the uncertainty in the reservoir model is represented by multiple geostatistical realizations. The main result of this workflow is a set of facies realizations and associated rock properties that honour, within a fixed tolerance, seismic and well log data and assess the uncertainty associated with reservoir modelling.     

Submesoscale vortex structures at the entrance of the Gulf of Lions in the Northwestern Mediterranean Sea

The meanders of a baroclinic coastal current in the Northwestern Mediterranean Sea have already been reported in the literature. These meanders can be surrounded by vortices. Such vortices have been observed in the western part of the Gulf of Lions but the location and the mechanism of their formation are poorly documented. In this paper, we use the current measurements of a one-year experiment, which was conducted in the eastern part of the Gulf of Lions to detect and characterize the vortex activity. A vortex detection algorithm based on few velocity data was developed. Current measurements were available at the sea surface (HF radars) and in the water column from 50 to 140 m depth (four current meter moorings). SST images and hydrologic data were also used. Results focus on observations that are coherent 50 m and at the surface. Vortices are anticyclonic, of submesoscale size and present maximal velocities of 30–50 cm/s. The drift speed of the vortices is comparable to but less than the velocity of the Northern Current. These observations enable to estimate the minimum vortex occurrence in this area. The presence of vortex structures is strongly correlated with a specific sequence of wind patterns.