A wave model for the Great Barrier Reef

A new wind wave generation model, WAMGBR, is presented that has been adapted from WAM especially for use in the complex geometry of the Great Barrier Reef. A technique (reef parameterization) has been presented that incorporates sub-grid scale dissipation caused by coral reefs. Three other improvements to WAM have been proposed. An explicit/implicit finite difference scheme has been implemented that allows for more efficient modelling (longer time steps) while maintaining diffusive characteristics that are at least as good as those of WAM. An offset in discrete angles creates more uniform diffusive characteristics. And, a transformed spherical coordinate system allows for more efficient grid sizes and smaller grid dependent refraction. Comparisons between modelling techniques and between model and measured data show that WAMGBR produces very good results in the difficult challenge of modelling both non-cyclonic and tropical cyclone waves in the geographically complex environment of the Great Barrier Reef.     

Tidally incised valleys on tropical carbonate shelves: An example from the northern Great Barrier Reef, Australia

The formation of incised valleys on continental shelves is generally attributed to fluvial erosion under low sea level conditions. However, there are exceptions. A multibeam sonar survey at the northern end of Australia's Great Barrier Reef, adjacent to the southern edge of the Gulf of Papua, mapped a shelf valley system up to 220 m deep that extends for more than 90 km across the continental shelf. This is the deepest shelf valley yet found in the Great Barrier Reef and is well below the maximum depth of fluvial incision that could have occurred under a − 120 m, eustatic sea level low-stand, as what occurred on this margin during the last ice age. These valleys appear to have formed by a combination of reef growth and tidal current scour, probably in relation to a sea level at around 30–50 m below its present position.

Tidally incised depressions in the valley floor exhibit closed bathymetric contours at both ends. Valley floor sediments are mainly calcareous muddy, gravelly sand on the middle shelf, giving way to well-sorted, gravely sand containing a large relict fraction on the outer shelf. The valley extends between broad platform reefs and framework coral growth, which accumulated through the late Quaternary, coincides with tidal current scour to produce steep-sided (locally vertical) valley walls. The deepest segments of the valley were probably the sites of lakes during the last ice age, when Torres Strait formed an emergent land-bridge between Australia and Papua New Guinea. Numerical modeling predicts that the strongest tidal currents occur over the deepest, outer-shelf segment of the valley when sea level is about 40–50 m below its present position. These results are consistent with a Pleistocene age and relict origin of the valley.

Based on these observations, we propose a new conceptual model for the formation of tidally incised shelf valleys. Tidal erosion on meso- to macro-tidal, rimmed carbonate shelves is enhanced during sea level rise and fall when a tidal, hydraulic pressure gradient is established between the shelf-lagoon and the adjacent ocean basin. Tidal flows attain a maximum, and channel incision is greatest, when a large hydraulic pressure gradient coincides with small channel cross sections. Our tidal-incision model may explain the observation of other workers, that sediment is exported from the Great Barrier Reef shelf to the adjacent ocean basins during intermediate (rather than last glacial maximum) low-stand, sea level positions. The model may apply to other rimmed shelves, both modern and ancient.     

珊瑚海西部晚第四纪海面温度:对澳大利亚大堡礁生长的影响

大堡礁位于澳大利亚东北边缘的珊瑚海和塔斯曼海,是世界上最大的珊瑚礁复合体。最近运用磁性地层学和锶同位素测年方法对珊瑚取心进行研究,估计珊瑚礁中央的年龄为(600±280)ka,比布容—松山磁性倒转期(780ka)还年轻。这些结果支持以前依据ODP133航次的地层、同位素和地震数据得出的大堡礁相对年轻(晚更新世)的结论。从ODP133航次的沉积物得到的所有浮游有孔虫氧同位素记录表明其δ18O值在晚更新世有所下降,记录了700～300ka之间温度上升了4～6℃。现代热带珊瑚礁生长需要的最低温度为18℃,在海面温度达到24℃以前珊瑚礁的生长速度都是非…     

New evidence for drowned shelf edge reefs in the Great Barrier Reef,Australia

We present four new high-resolution multibeam bathymetry datasets from the shelf edge of the northern Great Barrier Reef (GBR). Analysis of these data, combined with Chirp sub-bottom profiles and existing submersible observation data provides a fresh insight into the detailed morphology and spatial distribution of submerged reefs and terraces at the shelf edge. An extensive and persistent line of drowned shelf edge reefs exist on the GBR margin in about 40 to 70 m. They appear as barrier reefs up to 200 m wide and comprising twin parallel ridges of rounded pinnacles. Subtle yet consistent terrace and step features lie between 78 and 114 m seaward of the shelf edge reefs in the southern study area. Submersible observations confirm that the drowned reefs now provide a favorable hard substrate for live soft corals and algae. They form a consistent and extensive seabed habitat that extends for possibly 900 km along the GBR shelf edge. The submerged reef and terraces features may reflect a complex history of growth and erosion during lower sea-levels, and are now capped by last deglaciation reef material.     

Late Quaternary sedimentation in the Kadeok region, Korea

Analyses of high-resolution seismic-reflection data and geological samples revealed the characteristics of Quaternary sedimentation in the Kadeok region at the opening of the Nakdong River. The sediments comprise two layers, i.e., a 20- to 45-m-thick Holocene mud layer, and a coarser late-Pleistocene layer deposited in a fluvial environment. Sedimentological variations in the late-Pleistocene layer to the west and east of Kadeok Island are due to differences in channel maturity prior to the Holocene transgression. Holocene mud in the sea to the west of Kadeok Island was transported through a passway north of the island. Received: 26 October 1999 / Revision accepted: 7 February 2000     

The value of recreational fishing in the Great Barrier Reef, Australia: A pooled revealed preference and contingent behaviour model

Given the focus on protecting natural assets in the Great Barrier Reef Marine Park in Australia, it is important for managers and policy makers to understand the value of recreational fishing in the area, and how changes in management may affect those recreational values. Travel cost methods were used to estimate the value of recreational fishing in the Capricorn Coast in Central Queensland using data from on-site surveys conducted at boat ramps. The study also uses contingent behaviour models to estimate the change in the value of recreational fishing as conditions vary. Results indicate that there are high values associated with recreational fishing activity along the Capricorn Coast, and that the demand for recreational fishing is inelastic and that values are relatively insensitive to changes in catch rates.     

Late Quaternary carbonate sedimentation at the Sierra Leone Rise (eastern equatorial Atlantic Ocean)

In the eastern equatorial Atlantic Ocean, changes in the concentration of carbonate in Late Quaternary sediments resulted from reduced production of carbonate in surface waters and increased dilution with non-carbonate sediments during glacial maxima. During glacial stages, production of carbonate in surface water (measured as its accumulation rate in shallow, undissolved cores) decreased by one half. The glacial accumulation rate of non-carbonate components increased 1.5 to 4 times over Holocene values; the greatest increases occurred in the deepest cores.

Carbonate dissolution during stages 2, 3 and 4 increased the proportion of foraminiferal fragments and decreased the accumulation rate of susceptible species in the deep sites. In shallow sites, slightly increased dissolution can be detected during stage 3 while greatly increased dissolution occurred during stage 4. Bathymetric profiles of foraminiferal fragmentation and accumulation document a shoaling of the foraminiferal lysocline by 1000 m during glacial isotopic stages. We present a mass balance model of sediment accumulation for carbonate and insoluble components and from this model we estimate the rate of downslope transport and dissolution of carbonate at the Sierra Leone Rise. Our results show that during stage 4 the rate of carbonate loss to dissolution was greater than the rate observed today or during other interglacial stages. The calculated rates of dissolution for stages 2 and 3 are not significantly different from those calculated for stage 1.     

Bedload sediment transport dynamics in a macrotidal embayment, and implications for export to the southern Great Barrier Reef shelf

Keppel Bay is a macrotidal embayment on a tectonically stable, tropical coast, which links the Fitzroy River with the Great Barrier Reef continental shelf. Estuaries and deltas act as conduits between catchments and inner shelf environments. Therefore, understanding sediment transport pathways in these complex systems is essential for the management of ecosystems such as coral-reefs that are potentially vulnerable to enhanced river sediment loads. Furthermore, the morphology and sediment dynamics of subtidal sand ridges and dunes are relatively poorly characterised in macrotidal estuaries, particularly in turbid, episodic systems such as the Fitzroy River and Keppel Bay. Our sedimentological analysis of seabed samples, shear-stress modelling and three-dimensional acoustic imaging reveals that Keppel Bay is a mixed wave- and tide-dominated estuarine system. Areas of sediment starvation and shoreward transport characterise the offshore zone, whereas a complex of both active and relict tidal sand ridges, and associated subaqueous dunes, dominate the relatively protected southern Keppel Bay. Transport within this region is highly dynamic and variable, with ebb-dominated sediment transport through tidal channels into the outer bay where there is a switch to wave-dominated shoreward transport. Ultimately, bedload sediments appear to be reworked back inshore and to the north, and are gradually infilling the bedrock-defined embayment. Our characterisation of the Keppel Bay system provides a detailed example of the physiography of the seaward portion of a tide-dominated system, and shows that sediment transport in these areas is influenced by a variable hydrodynamic regime as well as relict channels and bedrock topography.     

High-sediment tolerance in the reef coral Turbinaria mesenterina from the inner Great Barrier Reef lagoon (Australia)

Sedimentation is an important stressor on coral reefs subjected to run-off, dredging and resuspension events. Reefs with a history of high-sediment loads tend to be dominated by a few tolerant coral species. A key question is whether such species live close to their tolerance thresholds or near their niche optima. Here, we analyse experimentally the sediment tolerance of a spatially dominant coral, Turbinaria mesenterina (Dendrophylliidae), at nearshore reefs in the central Great Barrier Reef lagoon. Testing was conducted in a 5-week tank experiment under manipulated sediment loading and flow conditions. Physiological stress was assessed based on the behaviour of three key response variables: skeletal growth rate, energy reserves (lipid content) and photosynthetic performance. Because sediment effects are likely to vary between flow regimes, sediment and flow responses were tested using a full factorial design. Sediment loads greater than 110 mg cm⁻² had no effect on any of the physiological variables, regardless of flow (0.7–24 cm s⁻¹). Turbinaria mesenterina is thus tolerant to sediment loads an order of magnitude higher than most severe sediment conditions in situ. Likely mechanisms for such tolerance are that: (1) colonies covered in sediment (60–120 μm) in low-flow were able to clear themselves rapidly (within 4–5 h); and (2) sediment provides a source of food. These results suggest that intensified sediment regimes on coastal reefs may shift coral communities towards dominance by a few well-adapted species.     

The initiation of the southern central Great Barrier Reef: New multiproxy data from Pleistocene distal sediments from the Marion Plateau (NE Australia)

Significant synchronous shifts in the chemistry, mineralogy, grain sizes and color of the sediments at 6 m below sea floor (mbsf) at ODP Site 1195 on the Marion Plateau (NE Australia) are interpreted to reflect a major regional paleoceanographic change: the initiation of the southern province of the Great Barrier Reef (GBR). The onset of this massive carbonate production centre nearby resulted primarily in increased deposition of carbonate-rich sediments of neritic origin. Both sedimentation rate and terrigenous input record a coincident decline attributed to inshore trapping of materials behind the reefs. Our best estimate places the development of reef framework in the southern part of the GBR between 560 and 670 kyr B.P., based on an age model combining magnetostratigraphic and biostratigraphic data. The proposed estimation agrees with previous studies reporting an age between 500 and 930 kyr B.P., constraining more tightly their results. However, it does not support research placing the birth of the GBR in Marine Isotope Stage (MIS) 11 ( 400 kyr), nor the theory of a worldwide modern barrier reef development at that time.     

Developing a long-term outlook for the Great Barrier Reef,Australia: A framework for adaptive management reporting underpinning an ecosystem-based management approach

The Great Barrier Reef Outlook Report 2009 was the first produced in response to a newly legislated requirement for five-yearly reports on the status of and outlook for the Great Barrier Reef. It adopted an ecosystem approach, assessing all habitats and species, ecosystem processes and major uses. By then considering the factors affecting the ecosystem, coupled with an assessment of management effectiveness, it provided a risk-based forward-looking projection for the ecosystem. Rarely has such a comprehensive, ecosystem-based report been produced to guide government action. With no pre-determined path to follow for interpreting the legislative requirements, the Great Barrier Reef Marine Park Authority (GBRMPA) developed a repeatable structure and method for Great Barrier Reef Outlook Reports that impartially and consistently considers the evidence and clearly presents the findings. The GBRMPA worked closely with relevant Australian and Queensland Government agencies as well as researchers, industry representatives and the community while developing the report. That such a report must be produced every five years allows an overview of the effectiveness of management responses to be regularly assessed. It also provides a transparent means of highlighting and tracking emerging risks facing the Great Barrier Reef.     

An integrated monitoring framework for the Great Barrier Reef World Heritage Area

Monitoring provides important feedback on how social and environmental systems are tracking and whether or not human activities, including management activities, are having an impact. This paper describes an approach applied to develop an integrated monitoring framework to inform adaptive management of the Great Barrier Reef World Heritage Area, a complex, multi-jurisdictional, multi-sectoral marine system of international importance. It identifies the gaps and opportunities to integrate the existing long-term, short-term and compliance-related monitoring and reporting initiatives to provide the information for more effective and efficient (adaptive) management of the Great Barrier Reef World Heritage Area. And as importantly it aligns expectations among different agencies about how monitoring will inform management. Fifty two high priority values, processes and pressures for management were identified along with 65 existing monitoring programs. Developing the monitoring framework was useful in several ways. First it brought together scientists, policy-makers, managers, and other interested stakeholders with different agendas, philosophies and incentives and established a common purpose, lexicon and language for an integrated monitoring program. Second, it highlighted the importance and usefulness of qualitative conceptual models as a framework for focused discussion around a set of hypotheses with relevance for management. Third, the process started an important conversation about defining and setting a realistic number of monitoring priorities for management. Finally, it has provided direction for how to build on existing initiatives to develop an integrated monitoring program for a globally significant world heritage area.     

Dissolved nutrient fluxes from the nearshore sediments of Bowling Green Bay,central Great Barrier Reef Lagoon (Australia)

The fluxes of dissolved inorganic N, P, and Si from the nearshore sediments of the Great Barrier Reef Lagoon are significantly lower than those reported from sediments in temperate regions at similar temperatures. The directly measured fluxes range from −23 to +28, −154 to +890, and −990 to +1750 μmol m⁻² day⁻¹ for PO₄³⁻, ΣN(=NH₄⁺ + NO₂⁻ + NO₃⁻) and Si, respectively. Estimates suggest that sediments are the major source of dissolved N to near-shore waters of the Lagoon greatly exceeding the dissolved flux from rivers. Resuspension of up to 1 cm of sediment during storms would have a very small effect on the PO₄³⁻ or Si(OH)₄ concentration of the overlying water, but would significantly raise the ΣN concentration. The productivity of these waters may be controlled at various times by the balance between the steady-state sedimentary flux of nutrients, the fluvial input, and storm resuspension.     

Late Quaternary evolution of coral reefs on a cool-water carbonate margin: the Abrolhos Carbonate Platforms, southwest Australia

Late Quaternary coral reefs have developed on the southwestern Australian margin, which has otherwise been characterised by cool-water carbonates since the Eocene. The Houtman Abrolhos coral reefs are at the limits of existence, extending, with the assistance of the Leeuwin Current, a poleward-flowing, warm water stream, into a region dominated by more temperate communities. Coring in the Easter Group reefs, supported by high precision dating, by both U/Th TIMS and ¹⁴C methods, has shown vigorous coral growth, with reefs over 26 m thick in the Holocene and over 15 m thick in the Last Interglacial. Each of the three Abrolhos platforms consists of a central platform composed of Last Interglacial reefs, about which windward and leeward Holocene reefs developed asymmetrically. Reef, peritidal and eolian facies comprise the emergent Last Interglacial limestones which are extensively calcretized, with reef facies up to 5 m above MSL. The Last Interglacial high stand lasted for at least 10 ka from 130 to 120 ka, and possibly 15 ka, from 132 to 117 ka. Holocene reef facies are also emergent by 0.5 m, and are overlain by peritidal and storm ridge facies in an upward-shallowing sequence. Windward (10 m thick) and leeward (26 m thick) Holocene reefs in the Easter Group show contrasting lithofacies. The wave-exposed windward reefs consist of a slow-growing association of coralline algal bindstones and coral framestones, whereas fast-growing coral framestones dominate the more protected leeward reefs. The leeward reefs commenced growth 10,000 years ago and grew to the present sea level by 6500 years ago, generating Holocene constructional topography consisting of ‘blue-hole’ terrain in the leeward parts of the platforms.     

Benthic Foraminifera as ecological indicators for water quality on the Great Barrier Reef

Benthic foraminifera are established indicators for Water Quality (WQ) in Florida and the Caribbean. However, nearshore coral reefs of the Great Barrier Reef (GBR) and other Pacific regions are also subjected to increased nutrient and sediment loads. Here, we investigate the use of benthic foraminifera as indicators to assess status and trends of WQ on GBR reefs. We quantified several sediment parameters and the foraminiferan assemblage composition on 20 reefs in four geographic regions of the GBR, and along a water column nutrient and turbidity gradient. Twenty-seven easily recognisable benthic foraminiferan taxa (>63 μm) were distinguished. All four geographic regions differed significantly (p < 0.05, ANOSIM) in their assemblage composition, and a redundancy analysis (RDA) showed that sediment parameters only explained a small proportion of the variance in the assemblage composition. On nine reefs along a previously studied water quality gradient, foraminifera showed a distinct shift in assemblage composition towards larger symbiont-bearing taxa from turbid inner shelf towards clearer outer shelf reefs. A RDA separated symbiotic and aposymbiotic (heterotrophic) taxa. In addition, total suspended solid and water column chlorophyll a concentrations were negatively correlated, and optical depth and distance to the mainland were positively correlated, with the abundance of symbiont-bearing taxa. Several large foraminifera were identified as indicators for offshore, clear water conditions. In contrast, heterotrophic rotaliids and a species retaining plastids (Elphidium sp.) where highly characteristic for low light, higher nutrient conditions. Application of the FORAM index to GBR assemblage composition showed a significant increase in the value of this index with increased distance from the mainland in the Whitsunday region (r² = 0.75, p < 0.001), and therefore with increasing light and decreased nutrient availability. We conclude that it will be possible to apply this index to GBR and possibly other Pacific reefs after some adaptations and additional experimental work on species-specific limiting factors.     

Socio-economic aspects of artificial reefs: Considerations for the Great Barrier Reef Marine Park

Artificial reefs are used to enhance recreational fishing and diving opportunities in the marine environment. Until recently, demand for artificial reefs in the Great Barrier Reef Marine Park (GBRMP) has been low due to the high value placed on the natural ecosystem of the Great Barrier Reef (GBR) and the abundance of fishing and diving opportunities it provides. In the GBRMP, where there are multiple stakeholder groups with diverse and often conflicting values and opinions, the deployment of artificial reefs will be a complex and controversial social issue. We review the available socio-economic literature regarding the deployment, use, and management of artificial reefs, and aim to identify and understand potential socio-economic issues and information gaps surrounding deployment of artificial reefs in the GBRMP. We also outline a strategy to guide decision-making and maximize the socio-economic value of artificial reefs should they be deployed in the GBRMP.     

Importance of wave-induced bed liquefaction in the fine sediment budget of Cleveland Bay,Great Barrier Reef

Data from a three-year long field study of fine sediment dynamics in Cleveland Bay show that wave-induced liquefaction of the fine sediment bed on the seafloor in shallow water was the main process causing bed erosion under small waves during tradewinds, and that shear-induced erosion prevailed during cyclonic conditions. These data were used to verify a model of fine sediment dynamics that calculates sediment resuspension by both excess shear stress and wave-induced liquefaction of the bed. For present land-use conditions, the amount of riverine sediments settling on the bay may exceed by 50–75% the amount of sediment exported from the bay. Sediment is thus accumulating in the bay on an annual basis, which in turn may degrade the fringing coral reefs. For those years when a tropical cyclone impacted the bay there may be a net sediment outflow from the bay. During the dry, tradewind season, fine sediment was progressively winnowed out of the shallow, reefal waters.     

Purpose,policy, and practice: Intent and reality for on-ground management and outcomes of the Great Barrier Reef Marine Park

Notwithstanding a complex array of international, national, and local policies designed to protect biodiversity and manage human activities, the condition of Australia's Great Barrier Reef has been deteriorating. This trend indicates that policy settings are inadequate or the right policies have been prescribed but not effectively implemented. This study aimed to determine which policies influenced on-ground management of the Great Barrier Reef World Heritage Area and Marine Park, how they were implemented, and the challenges encountered by practitioners in applying policies. The research required content analysis of policy instruments relevant to various jurisdictional levels, and surveys and interviews with 19 key informants across jurisdictions and agencies. This study found that policy intent is not automatically translated into practice: international agreements are interpreted and reinterpreted along the policy pathway to on-ground management and, consequently, the aspirations of these agreements can be frustrated and their effectiveness diluted. Due to limits of jurisdictional responsibility, practitioners within the Great Barrier Reef Marine Park Authority are constrained in influencing key factors that impact on their capacity to address threats and manage outcomes. The major policy gap affecting management outcomes was the absence of a mechanism with which to manage cumulative impacts responsible for deterioration of key ecosystem processes and biodiversity. These findings highlight that effective policy implementation is a challenging task, limited by gaps between intentions and outcomes, inconsistencies, and conflicting agendas. An improved understanding of the policy implementation process and the policy-practitioner relationship is essential to enhancing links between policy and on-ground management.     

Glacially influenced basin plain sedimentation in the southern Faeroe-Shetland Channel, northwest United Kingdom continental margin

Quaternary sediments at the southwest end of the Faeroe-Shetland Channel are preserved as a basin plain succession of variable fill geometry and lithology. In high-resolution seismic profiles the basin plain succession is characterised by laterally discontinuous and transparent, mounded lensoid bodies interbedded with acoustically well-layered sediments which display drape and onlapping reflection configurations. The lensoid bodies comprise an up to 50 m thick amalgamated package of mass-flow deposits consisting primarily of debris-flow diamictons. They represent resedimented glacigenic deposits derived from the West Shetland Shelf. Accumulation of these packages was episodic and related to specific rapid phases of downslope resedimentation, most probably concomitant with ice-marginal deposition on the West Shetland Slope. The acoustically well-layered sediments include glaciomarine hemipelagites and contourites. These indicate phases of reduced sediment supply from the adjacent shelf and slope areas, and probably represent the more pervasive “background” sedimentation in the basin. Although weak bottom-current activity may have prevailed throughout the glacial episodes, the onset of vigorous bottom-current circulation occurred at the changeover from a glacial to an interglacial regime. The debris flow packages form about 50% of the basin-plain sediments in this part of the Faeroe-Shetland Channel, thereby forming a significant component of the deep-water succession.     

Identifying biologically and physically special or unique sites for inclusion in the protected area design for the Great Barrier Reef Marine Park

A method to identify special and/or unique sites was developed when reviewing the zoning of the Great Barrier Reef Marine Park. Fifty-three (totalling approximately 10,445 km²) of 408 sites were identified as special or unique based on the amount, detail and nature of justification; geographic explicitness; type of information sources; number of independent sources; and national or international obligations. All but four special or unique sites increased in protection after the Zoning Plan was revised, increasing the area of no-take protection for all special or unique sites from 1614 km² (15.4%) to 4013 km² (38.4%).