Loading, Transformation, and Retention of Nitrogen and Phosphorus in the Tidal Freshwater James River (Virginia)

A nutrient mass balance for the tidal freshwater segment of the James River was used to assess sources of nutrients supporting phytoplankton production and the importance of the tidal freshwater zone in mitigating nutrient transport to marine waters. Monthly mass balances for 2007–2010 were based on riverine inputs, local point sources (including sewer overflow events), ungauged inputs, riverine outputs, and tidal exchange. The tidal freshwater James River received exceptionally high areal loads (446 mg TN m^?2 day^?1 and 55 mg TP m^?2 day^?1) compared to other estuaries in the region and elsewhere. P inputs were principally from riverine sources (84 %) whereas point sources contributed appreciably (54 %) to high N loads. Despite high loading rates and short water residence time, areal mass retention was high (143 mg TN m^?2 day^?1 and 33 mg TP m^?2 day^?1). Retention of particulate fractions occurred during high discharge, whereas dissolved inorganic fractions were retained during low discharge when chlorophyll-a concentrations were high. On an annualized basis, P was retained more effectively (59 %) than N (32 %). P was retained by abiotic mechanisms via trapping of particulate forms, whereas N was retained through biological assimilation of dissolved inorganic forms. Results from a limited suite of stable isotope determinations suggest that DIN from point sources was preferentially retained. Combined inputs from diffuse and point sources accounted for only 20 % and 36 % (respectively) of estimated algal N and P demand, indicating that internal nutrient recycling was important to sustaining high rates of phytoplankton production in the tidal freshwater zone.     

Suspended Sediment Transport in the Freshwater Reach of the Hudson River Estuary in Eastern New York

Deposition of Hudson River sediment into New York Harbor interferes with navigation lanes and requires continuous dredging. Sediment dynamics at the Hudson estuary turbidity maximum (ETM) have received considerable study, but delivery of sediment to the ETM through the freshwater reach of the estuary has received relatively little attention and few direct measurements. An acoustic Doppler current profiler was positioned at the approximate limit of continuous freshwater to develop a 4-year time series of water velocity, discharge, suspended sediment concentration, and suspended sediment discharge. This data set was compared with suspended sediment discharge data collected during the same period at two sites just above the Hudson head-of-tide (the Federal Dam at Troy) that together represent the single largest source of sediment entering the estuary. The mean annual suspended sediment–discharge from the freshwater reach of the estuary was 737,000 metric tons. Unexpectedly, the total suspended sediment discharge at the study site in November and December slightly exceeded that observed during March and April, the months during which rain and snowmelt typically result in the largest sediment discharge to the estuary. Suspended sediment discharge at the study site exceeded that from the Federal Dam, even though the intervening reach appears to store significant amounts of sediment, suggesting that 30–40% of sediment discharge observed at the study site is derived from tributaries to the estuary between the Federal Dam and study site. A simple model of sediment entering and passing through the freshwater reach on a timescale of weeks appears reasonable during normal hydrologic conditions in adjoining watersheds; however, this simple model may dramatically overestimate sediment delivery during extreme tributary high flows, especially those at the end of, or after, the “flushing season” (October through April). Previous estimates of annual or seasonal sediment delivery from tributaries and the Federal Dam to the ETM and harbor may be high for those years with extreme tributary high-flow events.     

Spatial and temporal characteristics of nutrient and phytoplankton dynamics in the York River Estuary, Virginia: Analyses of long-term data

Ten years (1985–1994) of data were analyzed to investigate general patterns of phytoplankton and nutrient dynamics, and to identify major factors controlling those dynamics in the York River Estuary, Virginia. Algal blooms were observed during winter-spring followed by smaller summer blooms. Peak phytoplankton biomass during the winter-spring blooms occurred in the mid reach of the mesohaline zone whereas peak phytoplankton biomass during the summer bloom occurred in the tidal fresh-mesohaline transition zone. River discharge appears to be the major factor controlling the location and timing of the winter-spring blooms and the relative degree of potential N and P limitation. Phytoplankton biomass in tidal fresh water regions was limited by high flushing rates. Water residence time was less than cell doubling time during high flow seasons. Positive correlations between PAR at 1 m depth and chlorophylla suggested light limitation of phytoplankton in the tidal fresh-mesohaline transition zone. Relationships of salinity difference between surface and bottom water with chlorophylla distribution suggested the importance of tidal mixing for phytoplankton dynamics in the mesohaline zone. Accumulation of phytoplankton biomass in the mesohaline zone was generally controlled by N with the nutrient supply provided by benthic or bottom water remineralization.     

Increasing Severity of Phytoplankton Nutrient Limitation Following Reductions in Point Source Inputs to the Tidal Freshwater Segment of the James River Estuary

We conducted monthly bioassay experiments to characterize light and nutrient use efficiency of phytoplankton communities from the chlorophyll-a maximum located in the tidal freshwater region of the James River Estuary. Bioassay results were interpreted in the context of seasonal and inter-annual variation in nutrient delivery and biomass yield using recent and long-term data. Bioassay experiments suggest that nutrient limitation of phytoplankton production has increased over the past 20 years coinciding with reductions in point source inputs and estuarine dissolved nutrient concentrations. Despite increasing nutrient stress, chlorophyll concentrations have not declined due to more efficient nutrient usage. Greater CHLa yield (per unit of N and P) may be due to feedback mechanisms by which the presence of toxin-producing cyanobacteria inhibits grazing by benthic and pelagic filter-feeders. Seasonal patterns in nutrient limitation indicate that phytoplankton in the James respond to variations in inflow concentrations of dissolved nutrients. This association gives rise to an atypical pattern whereby the severity of nutrient limitation diminishes with low discharge in late summer due to minimal dilution of local point sources inputs by riverine discharge. We suggest that this may be a common feature of estuaries located in proximity to urbanized areas.     

A model study of turbidity maxima in the York River estuary,Virginia

A three-dimensional numerical model is used to investigate the mechanisms that contribute to the formation of the turbidity maxima in the York River, Virginia (U.S.). The model reproduces the basic features in both salinity and total suspended sediments (TSS) fields for three different patterns. Both the prominent estuary turbidity maximum (ETM) and the newly discovered secondary turbidity maximum (STM) are simulated when river discharge is relatively low. At higher river inflow, the two turbidity maxima move closer to each other. During very high river discharge event, only the prominent turbidity maximum is simulated. Diagnostic model studies also suggest that bottom resuspension is an important source of TSS in both the ETM and the STM, and confirm the observed association between the turbidity maxima and the stratification patterns in the York River estuary. The ETM is usually located near the head of salt intrusion and the STM is often associated with a transition zone between upriver well mixed and downriver more stratified water columns. Analysis of the model results from the diagnostic studies indicates that the location of the ETM is well associated with the null point of bottom residual flow. Convergent bottom residual flow, as well as tidal asymmetry, is the most important mechanisms that contribute to the formation of the STM. the STM often exists in a region with landward decrease of bottom residual flow and net landward sediment flux due to tidal asymmetry. The channel depth of this region usually decreases sharply upriver. As channel depth decreases, vertical mixing increases and hence the water column is better mixed landward of the STM.     

Sources of Fatty Acids in Sediments of the York River Estuary: Relationships with Physical and Biological Processes

Fatty acid (FA) composition (neutral FA and phospholipid-linked FA) was examined in surface sediments at two sites of the York River estuary (VA, Chesapeake Bay) with contrasting benthic dynamics, Clay Bank (CB) and Gloucester Point (GP), in order to study organic carbon sources and their relationship to biological and physical processes. Our results suggest that FA composition in surface sediments was driven by biological and physical events, occurring mostly during the period of high river discharge, including: (1) the spring phytoplankton bloom, likely responsible for high concentrations of FA of algal origin at CB in March 2007, (2) the fall phytoplankton bloom, causing a secondary peak of algal FA and an increase in viable microbial biomass at CB in October 2007, and (3) a physical event in May 2007, resulting in high concentrations of terrestrial and bacterial FA at GP. FA concentrations tended to be higher but more variable during periods of high freshwater discharge, with trends more pronounced at the upstream site, suggesting connectivity between biological and physical processes.     

Factors Determining the Location of the Chlorophyll Maximum and the Fate of Algal Production within the Tidal Freshwater James River

Longitudinal variation in factors affecting phytoplankton production were analyzed to better understand the mechanisms that cause the formation of a chlorophyll maximum within the tidal freshwater James River. Phytoplankton production was two- to threefold higher in the region where persistent elevated chlorophyll concentrations occurred. Near this site, the morphology of the James transitions from a narrow, deep channel to a broad expanse with shallow areas adjoining the main channel. Shallower depths resulted in greater average irradiance within the water column and suggest that release from light limitation was the principal factor accounting for the location of the chlorophyll maximum. Grazing rates were low indicating that little of the algal production was directly consumed by zooplankton. Low exploitation by zooplankton was attributed to poor food quality due to high concentrations of non-algal particulate matter and potential presence of cyanobacteria. Metabolism data suggest that two thirds of net primary production was respired in the vicinity of the chlorophyll maximum and one third was exported via fluvial and tidal advection. Comparison of water column and ecosystem metabolism indicates that the bulk of respiration occurred within the sediments and that sedimentation was the dominant loss process for phytoplankton.     

Arsenic Geochemistry of the Great Dismal Swamp,Virginia, USA: Possible Organic Matter Controls

Surface water samples for arsenic (As) concentration and speciation analysis were collected from organic matter-rich blackwaters of the Lake Drummond portion of the Great Dismal Swamp in southeastern Virginia, USA. Arsenic concentrations and speciation were determined by selective hydride generation, gas chromatography with photoionization detection. Surface waters from the Great Dismal Swamp are high in dissolved organic carbon (DOC) concentrations (445–9,600 μmol/kg) and of low pH (4.2–6.4). Total dissolved As concentrations [i.e., As(III) + As(V)], hereafter As_T, range from 2.2 nmol/kg to 21.4 nmol/kg. Arsenite, As(III), concentrations range from ∼1 nmol/kg to 17.7 nmol/kg, and As(V) ranges from ∼1 nmol/kg to 14.1 nmol/kg. Arsenate, As(V), is the predominant form of dissolved As in the inflow waters to the Great Dismal Swamp, whereas within the swamp proper arsenite, As(III), dominates. Arsenite accounts for 8–37% of As_T in inflow waters west of the Suffolk Scarp, and between 54% and 81% of As_T in Lake Drummond and Great Dismal Swamp waters east of the scarp. Arsenite is strongly correlated to DOC (r = 0.94) and inversely related to pH (r = −0.9), both at greater than the 99% confidence level. Arsenate is weakly related to pH and DOC (r = 0.4 and −0.37, respectively), and neither relationship is statistically significant. No statistical relationships exist between As(V) or As(III) and PO₄ concentrations. The predominance of As(III) and its strong correlation with DOC in Great Dismal Swamp waters suggest that DOC may inhibit As(III) adsorption or form stable aqueous complexes with As(III) in these waters. Alternatively, phytoplankton and/or bacterially mediated reduction of As(V) may be important processes in the organic-rich blackwaters and/or sediment porewaters of the swamp, leading to the prevalence of As(III) in the water column.     

Compound paleovalley fills in the Lower Pennsylvanian New River Formation, West Virginia, USA

Ancient paleovalley fills are typically interpreted in the rock record using over-generalized models without carefully considering modern analogs, especially in light of recent discoveries. It is now known that many Quaternary paleovalleys are compound in origin, exhibit considerable stratigraphic complexity, contain multiple incisions, and can be orders of magnitude larger than their putative ancient counterparts. Compound paleovalley fills in the Lower Pennsylvanian New River Formation (NRF) are directly comparable to these Quaternary analogs, stimulating a paradigm shift in the interpretation of ancient paleovalleys. In the NRF, multiple laterally- and vertically-juxtaposed fill successions, separated by incision surfaces, record high-frequency fluvial responses to external controls within lower-order sequences. Lowstand incision and sediment bypass, as predicted in sequence stratigraphy, is largely discounted by the available evidence and the definition of regional sequence boundaries is not straightforward. The identification of genetic sequences may be the most effective approach to understanding the NRF and, by inference, many other ancient paleovalleys. Results from this study of the NRF promote a revised model for ancient paleovalleys that incorporates: 1) the pre-eminence of compound architecture, 2) periodic episodes of incision and subaerial exposure occurring in response to high-frequency changes in climate or relative sea level, 3) fluvial downcutting as the primary cause of paleovalley incision, although some sediments are still preserved in a net-erosional regime, and 4) composite, time-transgressive sequence boundaries that may be difficult or impossible to correlate regionally.     

Magnitude and Patterns of Change in Submerged Aquatic Vegetation of the Tidal Freshwater Hudson River

Three aerial photography inventories were used to examine change in submerged aquatic vegetation (SAV) in the tidal freshwater Hudson River over the interval 1997 to 2007. Overall, there was about a 30 % net decline in SAV coverage although there were also many individual areas of expansion. The invasive water chestnut (Trapa natans) did not change appreciably in net cover over the interval, and there was replacement of SAV by water chestnut along with slightly fewer cases of SAV replacing the exotic. A fine-scale (100 m by 100 m quadrats) analysis showed that about 30 % of quadrats that supported vegetation changed by more than 10 % in plant cover and overall SAV was quite dynamic. SAV in the Hudson is limited by light which is in turn controlled by suspended sediment. SAV was rarely found at depths >1 m below low water, and interannual differences in clarity affected the ability of SAV beds to maintain locally supersaturated levels of dissolved oxygen. We found that location within the River channel (proximity to shore) influenced the magnitude and variability in change in SAV between census periods. The physical nature of the adjacent shoreline also affected the magnitude of change with greater declines in cover in areas next to hard-engineered shore types. SAV in the Hudson is highly dynamic, apparently quite resilient, and the control of light by suspended sediment rather than phytoplankton growth offers a contrast to eutrophication-influenced changes in other estuaries. Management and protection of SAV habitat must recognize the highly variable nature of plant cover and that absence in any particular year does not preclude future appearance of submerged plants at that location.     

Climatic and Tidal Forcing of Hydrography and Chlorophyll Concentrations in the Columbia River Estuary

Hydrographic patterns and chlorophyll concentrations in the Columbia River estuary were compared for spring and summer periods during 2004 through 2006. Riverine and oceanic sources of chlorophyll were evaluated at stations along a 27-km along-estuary transect in relation to time series of wind stress, river flow, and tidal stage. Patterns of chlorophyll concentration varied between seasons and years. In spring, the chlorophyll distribution was dominated by high concentrations from freshwater sources. Periods of increased stream flow limited riverine chlorophyll production. In summer, conversely, upwelling winds induced input of high-salinity water from the ocean to the estuary, and this water was often associated with relatively high chlorophyll concentrations. The frequency, duration, and intensity of upwelling events varied both seasonally and interannually, and this variation affected the timing and magnitude of coastally derived material imported to the estuary. The main source of chlorophyll thus varied from riverine in spring to coastal in summer. In both spring and summer seasons and among years, modulation of the spring/neap tidal cycle determined stratification, patterns of mixing, and the fate of (especially freshwater) phytoplankton. Spring tides had higher mixing and neap tides greater stratification, which affected the vertical distribution of chlorophyll. The Columbia River differs from the more tidally dominated coastal estuaries in the Pacific Northwest by its large riverine phytoplankton production and transfer of this biogenic material to the estuary and coastal ocean. However, all Pacific Northwest coastal estuaries investigated to date have exhibited advection of coastally derived chlorophyll during the upwelling season. This constitutes a fundamental difference between Pacific Northwest estuaries and systems not bounded by a coastal upwelling zone.     

Tidal Influences on Biotic and Abiotic Factors in the Seomjin River Estuary and Gwangyang Bay,Korea

To assess changes in abiotic and biotic factors between flood and ebb tides, we investigated the seasonal phytoplankton dynamics and environmental conditions along a salinity gradient at 14 stations in the Seomjin River estuary (SRE), Korea, and conducted bioassays to investigate the effect of nutrient addition (+N, +P, and +NP) on phytoplankton growth. Saltwater intrusion upstream was greatly dependent on the amount of freshwater discharge resulting from seasonal rainfall. There was a strong negative correlation between salinity and the nitrate+nitrite concentration (p?<?0.001), and between salinity and the silicate concentration (p?<?0.001), but no clear correlation between salinity and the ammonium concentration, or salinity and the phosphate concentration (p?>?0.01). This indicates that the N and Si loading increased as a result of freshwater input. The algal bioassays showed that high phytoplankton growth rates were usually recorded in response to the +NP treatment, but in the saltwater zone, the phytoplankton community also responded rapidly to the +N treatment, and to the +P treatment in the freshwater zone. The range of nutrient limitation depended on freshwater discharge. The seasonal and horizontal distribution of phytoplankton communities changed along the salinity gradient. The significant differences in abiotic factors between flood and ebb tides play important roles in controlling the biotic factors, including the occurrence of aquatic organisms including microalgae.     

Population dynamics of spot,leiostomus xanthurus,in polyhaline tidal creeks of the York River estuary,Virginia

Most populations of estuarine-dependent, early life stages of marine fishes are open. As a result, it has been difficult to apply conventional population models to most systems. In this study, a marked population of young-of-year spot (Leiostomus xanthurus) was released into a polyhaline tidal creek within the Guinea Marshes of the York River estuary, Virginia. Over a 90-day study period, 221 marked fishes were recaptured. Plots of the ratio of marked to unmarked individuals (m_i/n_i) in subsequent samples indicated that the population was resident in the creek for up to 162 days with the average individual present for 81 days. When this population turnover rate was compared to the total population decay rate (marked plus unmarked fish), it was determined that exchange between habitats (immigration/emigration) accounted for about 36.4% of the total decay rate, with the remainder attributed to natural mortality. By correcting the overall disappearance rate for population turnover due to emigration and using this adjusted value as a measure of instantaneous mortality (z), the estimated production (over 90 days) in this population was 23,630 cal (98,870 J) per m². This figure agrees with a previously derived estimate for spot in the Guinea marshes and is nearly two orders of magnitude higher than other reported values for this species for all size classes over the entire growing season.     

Organic matter distribution in the modern sediments of the Pearl River Estuary

We determined biomarker concentrations and distributions for surface sediments from 54 sites in the Pearl River Estuary, China. We focus on a suite of four biomarker-based indicators for relative terrestrial to marine organic matter (OM) source: the branched-isoprenoid tetraether (BIT) index, the ratio of high/low molecular weight n-alcohols [(ΣC_26–34/(ΣC₁₆₊₁₈ + ΣC_26–34)], an analogous ratio for n-fatty acids and the ΣC₂₉-steroids/(ΣC₂₉-steroids + brassicasterol) ratio. All four exhibit the same terrestrial to marine transition seen in previous bulk δ¹³C studies, but with an abrupt decrease in the relative terrestrial contribution across the delta front to pro-delta transition. Concentrations of terrestrially-derived biomarkers show no systematic decrease across the transition. Instead, the decrease in the proportion of terrestrial OM is due to a decrease in the sedimentation rate and associated terrestrial OM burial across the delta toe. This suggests that diagenetic controls on the fate of terrestrial OM, such as increased biodegradation where sedimentation rate is low, are subordinate to sedimentological processes. Biomarker-derived temperature values are cooler than expected for the lower Pearl River catchment, suggesting that the dominant component of the terrestrial OM is derived from the cooler upland regions of the catchment. The dominance of input from more distal terrain with greater topographic relief is evidence for the importance of geomorphological control on terrigenous OM transport. Collectively, the results demonstrate the importance of sedimentological processes in the supply, deposition and transport of terrestrial OM.     

Mainstem and Backwater Fish Assemblages in the Tidal Caloosahatchee River: Implications for Freshwater Inflow Studies

Research strategies for investigating the freshwater-inflow requirements of estuarine fishes often integrate life-history information and correlative analyses of inflow and fish abundance. In tidal rivers, however, some fish have affinities for embayments, oxbows, and smaller tributaries, often referred to collectively as river “backwaters”. The objective of this study was to determine whether freshwater and estuarine fish assemblages differed between backwaters and the mainstem of the tidal Caloosahatchee River, a highly managed river system located in an urban setting in southwest Florida. Nonmetric multidimensional scaling of 21.3-m seine data revealed that fish assemblages did indeed differ between the backwater and mainstem habitats in each of three river sections. Univariate analyses identified species that differed in abundance between the habitats, which included ecologically and economically important fishes in the region. For example, striped mullet Mugil cephalus and pinfish Lagodon rhomboides were more abundant along the river's mainstem; common snook Centropomus undecimalis and bluegill Lepomis macrochirus were more abundant in the river's backwaters. For those species that were more abundant along the mainstem of the river or showed no difference, studies that measure changes in the distribution and abundance of these species with varying inflow along the mainstem of the river are justified. However, for species that were more abundant in backwater areas, geomorphological features should be considered in the design of studies that assess factors affecting fish use.     

Sources of Dissolved Organic Carbon in Rivers of the Yenisei River Basin

The spatial and temporal variations in concentrations of dissolved organic carbon in the Yenisei River and its major tributaries are analyzed. The results obtained suggest that the maximal contribution to the flows of dissolved organic carbon in the Yenisei River is made by cryohydromorphic forest landscapes of the Central Siberian Plateau.     

长江口盐沼土壤有机质分布与矿化的空间差异

在长江口崇明东滩两类植被(互花米草、土著植被)区域分别选择一条纵向剖面,在高潮滩、中潮滩及光滩取得柱状样,利用颗粒有机碳(POC)含量、碳稳定同位素组成、土壤C/N比与颗粒组成等资料,研究盐沼有机质的分布与矿化特征。结果表明,两个纵向剖面的相同高程部位柱样之间,颗粒有机碳δ13C与POC含量的深度特征均存在显著差异;两个柱样的δ13C与POC含量的平均值均相差较大。互花米草对高潮滩柱样有机质的含量与组成均产生了明显影响,对中潮滩柱样有机质组成已有一定影响;土著植被对高潮滩柱样有机质组成的影响显著。盐沼植被对土壤有机质的分布与矿化均产生了明显影响。高潮滩柱样矿化阶段不同的有机质组分混杂,中潮滩柱样有机质的组成相对简单,矿化程度较弱。柱样粘粒含量与含水量在垂向上变化频繁,盐沼原始沉积层序对柱样的物质分布特征具有本底制约。不同高程部位柱样之间,有机质的深度分布特征以及矿化程度差异显著,盐沼碳动态受到潮滩特征性动力沉积过程的显著影响。     

长江下游感潮河段大洪水和特大洪水的形成及趋势

分析了长江下游感潮河段大洪水和特大洪水高水位形成的水文因素,揭示了年最高水位今后一段时期内可能的变化趋势。主要结论是:该河段大洪水和特大洪水高水位的形成原因十分复杂,本世纪以来每次大洪水和特大洪水高水位的形成几乎都有其主要原因;该河段大洪水特大洪水高水位出现的频次有增加趋势;自1975年以来,年最高水位的均值呈明显的升高趋势,其主要原因是人类活动对防洪产生的负面影响,海平面上升也有一定的影响。     

珠江口盆地惠州凹陷古近系珠海组近海潮汐沉积特征

前人研究成果多认为惠州凹陷西南部珠海组形成于辫状三角洲环境,或以受海侵影响的三角洲前缘沉积作用为主。在对研究区宏观构造—古地理背景分析之上,以岩心详细观察与描述为基础,通过岩相、测井相并辅助宏观地震相分析,提出珠海组沉积时期来自古珠江三角洲体系提供的丰富砂质沉积物在该区经历了潮汐的强烈改造作用,以潮汐沉积作用为主的认识。详细描述了发育在珠海组的潮汐沉积构造、潮下带、潮间带与潮上带沉积序列及其相组合特征,并以单井相分析为基础,结合区域地震相分析了研究区沉积相宏观展布特征。这一新认识为该区油气勘探,特别是位于该区主体部位的油气田开发中储层预测提供了依据和新思路。