Environmental effects on the recruitment variability of nursery species

The recruitment variability of the marine fish species Dicentrarchus labrax, Platichthys flesus and Solea solea was evaluated in the Mondego estuary (Portugal) from 2003 to 2007. The relationships between sea surface temperature, NAO index, coastal wind speed and direction, precipitation and river runoff prior to the estuarine colonization and the abundance of 0-group fish were evaluated using gamma-based Generalized Linear Models. Dicentrarchus labrax and P. flesus 0-group decreased in abundance towards the end of the study period, while S. solea, despite low abundance in 2004, increased in abundance in 2007. For D. labrax, river runoff, precipitation and east–west wind were significant; for P. flesus, precipitation, river runoff and both north–south and east–west wind components were significant parameters, while for S. solea only river runoff was important. Results were compared with recent projections for climate change scenarios, to evaluate their effects on future recruitment levels.     

光强对欧洲舌齿鲈稚鱼眼组织基因表达的影响

大多数海水鱼类靠视觉器官识别并捕捉饵料,光强对其视觉器官基因表达影响的研究较少.     

Seasonal changes in community composition and trophic structure of fish populations of five salt marshes along the Essex coastline, United Kingdom

European intertidal salt marshes are important nursery sites for juvenile fish and crustaceans. Due to the increasing threat of habitat loss, the seasonal changes of salt marsh fish communities need to be understood in order to appreciate the ecological and economic importance of the saltmarsh habitat. This study was the first in Great Britain to investigate the seasonal changes of salt marsh fish communities and the variation in community structure between closely located marsh habitats. Between February 2007 and March 2008, five marshes on three estuaries of the Essex coastline were sampled using flume nets to block off intertidal creeks at high tide. Fourteen fish species were caught. The community overall was dominated by three species that made up 91.6% of the total catch: the common goby Pomatoschistus microps (46.2% of the total catch), juvenile herring Clupea harengus (24.3%), and juvenile and larval sea bass Dicentrarchus labrax (21.2%). Cluster analysis demonstrated clear seasonal patterns, with some community structures unique to specific marshes or estuaries. The marsh fish community shifts from a highly diverse community during spring, to a community dominated by D. labrax and P. microps in autumn, and low diversity during winter months. Gravimetric stomach content analysis of fish community identified three main trophic guilds; macroinvertivores, planktivores and omnivores. The macroinvertivore feeding guild contained D. labrax and P. microps, the two most frequently occurring species. This investigation demonstrates the importance of British salt marshes as nursery habitats for commercial fish species.     

Estuarine production of resident and nursery fish species: Conditioning by drought events?

The production of resident (Pomatoschistus minutus and Pomatoschistus microps) and marine juvenile fish species using the Mondego estuary (central Portugal) as nursery grounds (Dicentrarchus labrax, Platichthys flesus, Solea solea), was assessed in order to: (1) understand the potential of the estuary for fish production; (2) know the production of nursery fish species likely to be exported to the coastal stocks; and (3) how anthropogenic and natural stress could influence the estimated production. Sampling occurred from June 2003 to May 2006 and together the 5 species in study comprised around 70% of the whole fish community numbers and biomass. Increasing drought conditions were observed, starting with a normal hydrological year in 2003 until attaining a severe drought in 2005, which resulted in low river discharges (1/3 of the mean river discharges in 2003). Additionally, high water temperatures were observed in 2003 and 2005 (24 and 26 °C, night temperatures). The secondary production was estimated using the increment summation method, after recognition of the cohorts. Production was in general lower in the Mondego estuary when compared to other systems, which was associated to the estuary's small area (only 3.4 km², less than 1/4 of area compared to other studied systems). Dicentrarchus labrax was among the most productive species. Production decreased in the drought year for all species, especially evident for D. labrax, P. minutus and P. flesus. No direct effects could be attributable to the salinity and temperature variations and to the low freshwater discharges (resulting from the drought and high temperatures), yet these were pointed as probable major reasons for the decreased production. A significant reduction (15–45% reduction in the estuarine production) was also concluded for the potential production to be exported for coastal areas by the nursery species in the drought conditions.     

Impact of climate and hydrology on juvenile fish recruitment towards estuarine nursery grounds in the context of climate change

Larvae of various coastal fish undergo immigration from spawning grounds towards estuarine nurseries. Several environmental factors can have an important impact on survival at this stage making it crucial for recruitment. Generalized linear models were applied in order to investigate the relation between river drainage, sea surface temperature (SST), NAO index and the North-South wind component intensity, over the two months prior to the estuarine colonization peak, and the densities of Platichthys flesus, Dicentrarchus labrax, Diplodus vulgaris and Diplodus bellottii in the nursery grounds based on a discontinuous historical dataset (from 1978 to 2006), for the Tagus estuary. The relation between SST over the 12 months prior to the estuarine colonization peak and fish densities in the nurseries was also investigated, as it integrates the periods of spawning stock maturation, spawning and larval immigration. While SST over the prior 12 months was negatively correlated with the abundance of P. flesus, it was positively correlated with the abundance of D. bellottii. Abundance of D. vulgaris was positively correlated with SST in the two months prior to the estuarine colonization peak, while the abundance of D. labrax was positively correlated with river drainage. The relations between SST and the abundance of P. flesus, a cold-water species with declining densities, and the subtropical species D. bellottii and D. vulgaris, which are increasing in abundance, are indicative of species abundance alterations related to climate warming. Dicentrarchus labrax will probably also be affected by climate change because of lowered precipitation and consequently river drainage.     

Fish assemblages and rapid colonization after enlargement of an artificial reef off the Algarve coast (Southern Portugal)

Artificial reefs (ARs) have been deployed in Algarve (Southern Portugal) coastal waters to contribute to the sustainability of local nearshore fisheries. Herein, we describe the colonization process of the recently deployed Faro/Ancão AR, and assess the time until the fish assemblage reaches stability and their seasonal patterns. In addition, we compare the results from the present study with those previously reported for an older AR. The fish assemblages were monitored monthly over a 2‐year period by means of visual census. A rapid increase in fish colonization occurred within the first 4 months. After this initial period the assemblage structure showed high similarity (> 73%). The high rate of colonization of the AR was related to the maturity already achieved by the nearby 14‐year‐old AR and to the fish migration from the Ria Formosa lagoon, a nearby nursery habitat. The reef fish assemblage structure showed a seasonal pattern, mainly associated with recruitment episodes of occasional demersal species (Boops boops, Trachurus trachurus and Pagellus spp.) in spring and summer. A total of 66% of the species found in AR are of commercial and recreational importance. The overall mean density and biomass were 2.8 ind·m^?3 and 207 g·m^?3. The occasional demersal species accounted for 42% of the fish density. The most important species in terms of biomass belong to the Sparidae family along with Dicentrarchus labrax. The fish assemblage of the new ARs showed higher mean number of species, diversity, density and biomass values than those reported for the older AR. This result was associated with enlargement of the AR area and with the fishing exploitation of the isolated, small and patchy old AR. Moreover, the high biomass values recorded in the new ARs were mainly due to the increased density of D. labrax after AR enlargement. The results of the present study are used to define guidelines for suitable management strategies for the AR areas that are exploited by the local commercial and recreational fisheries.     

基于广义可加模型探讨大亚湾初级生产力月变化及其与环境因子的关系

In this study, the horizontal and vertical distribution of primary production(PP) and its monthly variations were described based on field data collected from the Daya Bay in January–December of 2016. The relationships between PP and environmental factors were analyzed using a general additive model(GAM). Significant seasonal differences were observed in the horizontal distribution of PP, while vertical distribution showed a relatively consistent unimodal pattern. The monthly average PP(calculated by carbon) ranged from 48.03 to 390.56 mg/(m~2·h),with an annual average of 182.77 mg/(m~2·h). The highest PP was observed in May and the lowest in November.Additionally, the overall trend in PP was springsummerwinterautumn, and spring PP was approximately three times that of autumn PP. GAM analysis revealed that temperature, bottom salinity, phytoplankton, and photosynthetically active radiation(PAR) had no significant relationships with PP, while longitude, depth, surface salinity, chlorophyll a(Chl a) and transparency were significantly correlated with PP. Overall, the results presented herein indicate that monsoonal changes and terrestrial and offshore water systems have crucial effects on environmental factors that are associated with PP changes.     

Escaped introduced sea bass (Dicentrarchus labrax) infected by Sphaerospora testicularis (Myxozoa) reach maturity in coastal habitats off Canary Islands

Aquaculture activities have introduced European sea bass (Dicentrarchus labrax) along the coasts of some of the Canary Islands. We present the first record of simultaneous male and female gonad maturation of escaped sea bass in the wild, indicating that this species is finding its essential fish habitat (EFH). Individuals with ripe gonads were only caught during January and February 2009, although the maturation and spawning season may last from November to February in the studied area (Tenerife island). Bass infected by Sphaerospora testicularis were found and the incidence of the parasite was checked. This represents the southernmost record of the parasite, probably introduced together with sea bass stock. The results are discussed from the point of view of risk assessment and the ecology of invasions being valuable for aquaculture management in Central North Atlantic and Mediterranean areas.     

Phytoplankton biornass in relation to the surface hydrography of southern New Zealand and possible effects on the food chain

Abstract

The surface distribution of salinity, temperature, nitrate‐nitrogen (N0₃‐N), and chlorophyll a in the southern New Zealand, Foveaux Strait region in February 1977, 1978, 1979, and 1980 was highly variable. The source of new nitrogen appears to be incursions of high‐salinity water west and east of Stewart Island. Although it seems likely that the source of this high‐nutrient, high‐salinity water is vertical, a horizontal advective source cannot be ruled out The chlorophyll a content of surface waters was not related directly to the NO3‐N concentrations. This lower food chain variability may be linked to variability in economically important species. Oysters grew twice as fast in the summer of 1978/79 as they did in 1979/80. But the mean chlorophyll a values were very similar for February of both years (2.5 and 2.2 μg 1^?1, respectively). The elevated NO₃‐N levels in 1979 may have resulted in much higher phytoplankton levels later that summer and resulted in the higher oyster growth rate that year. The mechanisms driving this variability have yet to be determined.     

Distribution and Habitat Preferences of the Introduced MummichogFundulus heteroclitus(Linneaus) in South-western Spain

The distribution and apparent habitat preference of the common mummichog (Fundulus heteroclitus) in south-western Spain were examined during summer–autumn 1996. This introduced species was more or less continuously distributed along the Atlantic coast of Spain, being more abundant in sites near the coastline (usually <10 km inland), mainly in four extensive marshes. The species preferred marsh-related mesohabitats, such as salt lagoons, saltmarsh fish ponds and marsh channels, both natural and man-modified.Fundulus heteroclituswas mostly found at salinities >25. It was the most frequently captured fish species, occurring at 81 of the 272 sites sampled; their frequency of occurrence was almost twice that of the second ranked species (Gambusia holbrooki). However, in over 80% of cases,F. heteroclituswas found alone or with only one sympatric fish species, which usually belonged to a group composed ofGobius niger,mugilids,Anguilla anguilla, Blenniussp.,Lebias ibera, Pomatoschistussp. andDicentrarchus labrax. Finally, the origin and dispersal of mummichog in the Iberian peninsula and the potential effects of this species on native fish populations is discussed.     

Environmental factors structuring fish composition and assemblages in a small macrotidal estuary (eastern English Channel)

The fish assemblage structure was analyzed along an estuarine gradient of a small macrotidal estuary (the Canche, France). Fishes were collected every two months between May 2006 and July 2007 from 12 sampling stations using a 1.5-m beam trawl with a 5 mm mesh size in the cod end. To complement this information, sampling was also performed using 15-m fyke nets (8 mm mesh size in the cod end). For each sample, abiotic (temperature, salinity, pH, oxygen, turbidity, river flow, wind speed and depth) and biotic (macro crustacean species abundances) were recorded. Throughout the study, 28 fish species belonging to 20 families were collected. Fish catches were dominated by juveniles, especially Young-Of-the-Year (YOY) for the majority of the species. According to the Index of Relative Importance (IRI), common goby Pomatoschistus microps, flounder Platichtys flesus, sprat Sprattus sprattus, sea-bass Dicentrarchus labrax and plaice Pleuronectes platessa were the most abundant species, together accounting for 99.2% of the total IRI. Estuarine residents (ER = 66.2%) and marine juvenile migrants species (MJ = 31.4%) were the most important ecological guilds. The structure of the fish assemblage and its relationship to environmental variables was examined using multivariate techniques. Cluster and non-metric multidimensional scaling (nMDS) analysis defined six distinct groups in the Canche estuary, which are discriminated by specific species (SIMPER). Spatio-temporal variations in fish assemblage structure reflect the density peaks of the most abundant species. Spearman rank correlations and canonical correspondence analysis (CCA) showed that among the ten environmental variables examined, temperature, salinity and Crangon crangon (a potential predator for YOY fish or prey for older ones) are the three most important factors influencing fish species richness and abundances. Our observations reinforce the idea that certain fish species may have different life history styles in different geographic areas. The present study highlights the necessity of a better knowledge of the connectivity between estuaries and adjacent marine areas. The Canche constitutes an important ecosystem for fishes and as it is subject to little anthropogenic disturbance; its ichthyofauna can be viewed as a reference or normal assemblage for small temperate macrotidal estuaries.     

大黄鱼(Larimichthys crocea)白细胞介素10(IL-10)基因克隆及溶藻弧菌(Vibrio alginolyticus)侵染后表达变化分析

白细胞介素10(interleukin10,IL-10)是鱼类先天性免疫因子之一,在炎症反应和免疫调节中有着重要作用。本研究获得大黄鱼(Larimichthys crocea)IL-10基因cDNA序列,由899个核苷酸组成,含1个555bp的开放阅读框、编码184个氨基酸,预测编码蛋白分子量为21.24kDa、N端有22个氨基酸组成的信号肽序列。氨基酸序列多重比对表明大黄鱼IL-10具有IL-10家族特征性序列和构成2对二硫键的4个保守性半胱氨酸,与欧洲鲈(Dicentrarchuslabrax)IL-10序列相似性最高(78.5%);系统进化树分析显示大黄鱼IL-10和其他鱼类IL-10形成一个大簇,与欧洲鲈进化关系最近。荧光定量PCR(quantitative real-time PCR, qRT-PCR)检测结果显示健康大黄鱼IL-10基因在鳃和肠中高表达,肝和头肾中低表达;溶藻弧菌(Vibrio alginolyticus)侵染后大黄鱼肠、脑、脾、肝和头肾中IL-10基因表达量均显著上调(P0.05),其中头肾和肝中上调幅度最大(分别为菌侵染前的10.06倍和8.79倍)。综上,大黄鱼IL-10基因表达与病原菌感染密切相关,为深入研究大黄鱼IL-10的生物学功能及免疫机制提供了基础资料。     

Stable isotopes in juvenile marine fishes and their invertebrate prey from the Thames Estuary,UK, and adjacent coastal regions

Estuaries are regarded as valuable nursery habitats for many commercially important marine fishes, potentially providing a thermal resource, refuge from predators and a source of abundant prey. Stable isotope analysis may be used to assess relative resource use from isotopically distinct sources. This study comprised two major components: (1) development of a spatial map and discriminant function model of stable isotope variation in selected invertebrate groups inhabiting the Thames Estuary and adjacent coastal regions; and (2) analysis of stable isotope signatures of juvenile bass (Dicentrarchus labrax), sole (Solea solea) and whiting (Merlangius merlangus) for assessment of resource use and feeding strategies. The data were also used to consider anthropogenic enrichment of the estuary and potential energetic benefits of feeding in estuarine nursery habitat.     

Multi-element otolith chemistry of juvenile sole (Solea solea), whiting (Merlangius merlangus) and European seabass (Dicentrarchus labrax) in the Thames Estuary and adjacent coastal regions

Estuaries are regarded as valuable nursery habitats for many commercially important marine fishes, potentially providing a thermal resource, refuge from predators and a source of abundant prey. To assess the extent of estuarine use by juvenile (0+) common sole (Solea solea), whiting (Merlangius merlangus) and European seabass (Dicentrarchus labrax) we: (1) developed techniques to distinguish between estuarine and coastally-caught juveniles using otolith chemistry; and (2) examined the accuracy with which multi-elemental signatures could re-classify juveniles to their region of collection.High-resolution solution-based inductively coupled plasma mass spectrometry (HB-SB-ICPMS) was used to quantify 32 elements within the juvenile otoliths; 14 elements occurred above detection limits for all samples. Some elemental distributions demonstrated clear differences between estuarine and coastally-caught fish. Multivariate analysis of the otolith chemistry data resulted in 95–100% re-classification accuracy to the region of collection. Estuarine and coastal signatures were most clearly defined for sole which, compared to bass and whiting, have low mobility and are less likely to move from estuarine to coastal habitats between larval settlement and later migration to adult stocks. Sole were the only species to reveal an energetic benefit associated with an estuarine juvenile phase. The physiological ability of bass to access upper estuarine regions was consistent with some elemental data, while the high mobility and restricted range of whiting resulted in less distinct otolith chemistries.     

Cloning of cytochrome P450 1A (CYP1A) genes from the hermaphrodite fish Rivulus marmoratus and the Japanese medaka Oryzias latipes

To use two small fish Rivulus marmoratus (Cyprinodontiformes, Rivulidae) and the Japanese medaka Oryzias latipes (Belloniformes) as testing models in molecular ecotoxicology, we have cloned the cytochrome P450 1A (CYP1A) gene after screening of both genomic DNA libraries, and sequenced 11,863 and 7,243 bp including all the exons and introns with promoter regions, respectively. The Rivulus and the medaka CYP1A gene consisted of seven exons (including non-coding exons) with high homology to mammals. In the promoter region, Rivulus CYP1A gene has seven xenobiotic response elements (XREs) and two metal response elements (MREs), while the Japanese medaka CYP1A gene has six XREs and four MREs. Interestingly, medaka CYP1A gene has a number of MREs at the promoter, which may affect its response on metal exposure. We describe here the gene structure of both fish CYP1A genes.     

Community structure in mussel beds at Logatchev hydrothermal vents and a comparison of macrofaunal species richness on slow- and fast-spreading mid-ocean ridges

Species lists for vent fields on the Mid‐Atlantic Ridge (MAR) from 14°N to 38°N suggest that there is a northern (>27°N), shallow (<2000 m) fauna and a southern (<27°N), deeper (>3000 m) endemic vent fauna, but little is known about how community structure varies along the ridge axis. In this study, quantitative samples of macrofaunal invertebrates associated with mussels (Bathymodiolus puteoserpentis) were collected at Logatchev (14°45′N), the southern‐most explored vent field on the MAR. Community structure (including species composition, species richness, diversity, and relative species abundances) in mussel beds at Logatchev was compared with that of Snake Pit (23°22′N) and Lucky Strike (37°17′N) mussel beds. The most striking feature of the Logatchev mussel‐bed macrofaunal invertebrate community was the tremendous abundance (up to 2390 individuals per liter of mussel‐volume sampled) and biomass of the ophiuroid, Ophioctenella acies. Logatchev and Snake Pit mussel beds share >50% of their associated macrofaunal species; these two sites share only 20–25% of their macrofaunal species with Lucky Strike. Species–effort curves and univariate measures of diversity (H′, J′) do not support the claim that diversity of vent organisms on the MAR is highest at Logatchev, at least when one assesses this within a habitat type. Multivariate analysis readily differentiates the species‐abundance characteristics of Logatchev, Snake Pit, and Lucky Strike mussel‐bed macrofaunas. The relationship between sea‐floor spreading rate and diversity was explored through comparison of species richness in mussel‐bed habitats on slow‐spreading (MAR), fast‐spreading [northern East Pacific Rise (EPR)], and ultra‐fast‐spreading (southern EPR) mid‐ocean ridges. Species richness was greater in samples from the faster‐spreading ridge axes, where vents are more closely spaced but shorter lived, than on slow‐spreading centers, where vents are further apart but longer lived.     

Phylogeography of Ophryotrocha labronica (Polychaeta,Dorvilleidae) along the Italian coasts

Species of the genus Ophryotrocha are a well‐studied group of organisms but, despite the relatively large body of biological studies, little is known about their intra‐specific patterns of genetic diversity. In the present study, we analysed the patterns of genetic variation in samples of Ophryotrocha labronica (Polychaeta, Dorvilleidae) collected along the Italian coasts within three regions with different thermal regimes: the Northern Adriatic Sea (NAS), the Ligurian Sea (LS), and the South/Southeast Sicilian Sea (SS). A partial sequence of the cytochrome c oxidase subunit I (COI) gene was used as a genetic marker. An analysis of molecular variance (AMOVA) showed significant genetic differentiation between the NAS and the other regions. Conversely, little or no genetic structuring was found between the LS and the SS or amongst locations within a given region. A Bayesian phylogenetic tree and a median‐joining network provided evidence for the occurrence of two highly divergent genetic lineages characterized by a high average sequence divergence (17.2%, Kimura two‐parameter distance). The spatial patterns of genetic variation found in O. labronica may reflect the signature of past expansion events of the two genetic lineages. Although the high sequence divergence suggested that cryptic speciation within O. labronica may have occurred, other traits such as the absence of reproductive isolation, pattern of phenotypic variation and habitat specificity prompted us to regard the two groups as distinct COI lineages of O. labronica.     

Effects of salinity,temperature, and light intensity on the growth rates of two halophilic phytoflagellates in mixed culture

Growth rates of two halophilic phytoflagellates, Dunaliella euchlora Lerche and D. salina Teodoresco, were studied in mixed batch cultures grown in filtered, axenic brines from Lake Grassmere, New Zealand. Forty‐five combinations of temperature, salinity, and light intensity were used. A maximum growth rate of 1.50 doublings day^‐1 was attained by D. salina at 26°C, 190 × 10^‐3S at a light intensity of 126 μE m^‐2 s^‐1. D. euchlora showed maximum growth rate of 1.16 doublings day^‐1 at 20°C, 120 × 10^‐3S at a light intensity of 180 μE m^‐2s^‐1. Predicted maximum values of 1.41 and 1.14 doublings day^‐1 respectively were obtained from regression models based on 45 replicate treatment combinations. In decreasing order of importance, temperature, salinity, and light intensity influence growth rates of brine algae. The optimum temperature for growth of both species increased as the salt concentration increased but decreased with increasing light intensity.