Estimate of biological production in some stream invertebrates

Annual production of invertebrates was investigated in two streams, the Hinau and Horokiwi, in the North Island of New Zealand. Estimates were based on the instantaneous growth rate method, with adjustments made according to the number of generations produced per year. Production of primary consumers (herbivores and detritus feeders) was 7.6–72.1 g.m^‐2.y^‐1, and of secondary consumers (predators) 0.8–11.9 g.m^‐3.y^‐1. In both streams the lowest production was found in tree‐shaded situations. Production: biomass ratios ranged from 5.3 to 7.9 for primary consumers, and from 3.7 to 6.5 for secondary consumers. These ratios fall within the range of results found by workers in other countries. Fish in the two streams studied feed mainly on the primary consumers and so may be competing for food with invertebrate secondary consumers.     

马里亚纳海沟万米级水文观测研究

深渊观测是开展深渊科学研究的前提。文章介绍了2020年7月"东方红3"船在马里亚纳海沟"挑战者深渊"附近完成的一次海洋调查。基于船载温盐深综合剖面测量系统获取的万米级剖面数据,分析全海深的温盐性质,并依据Thorpe尺度方法和细尺度参数化方法,进一步估算不同深度层的湍动能耗散率。结果表明:"挑战者深渊"的深层海水十分稳定, 3 000—5 000 dbar的温盐特征与下层绕极水相同;受弱层结背景下的内潮影响, 5 000—8 000 m的耗散率显著提升。本次调查获取的万米级水文剖面为马里亚纳海沟的深渊探索提供了数据方面的支撑。     

System concept and results of the Canadian Aerial Hydrography Pilot Project

Abstract

The Canadian program for obtaining hydrographic data by aerial methods consists of merging laser bathymeter data with photogrammetric depth data. The main deficiency of the photogrammetric approach for bathymetric measurements is that incomplete stereomodels can occur in areas where little or no land appears. This problem is overcome by using an inertial navigation system (INS) hardmounted to the aerial camera to provide the orientation parameters of position and attitude for each photograph. In order to meet the high accuracy requirement, the INS and other complementary navigation data are processed through a post‐mission track recovery software package. The photogrammetric depths are improved further by merging them with the waterline height information and the laser bathymeter depths using a least‐squares adjustment algorithm. The photogrammetric compilation, depth measurements, shoreline plots, and laser bathymeter integration is done in an analytical stereoplotter. This instrument provides an on‐line refraction correction necessary because of the two‐media mode of operation. Results of a recent pilot project indicate that the integrated system is capable of obtaining depth measurements that agree with echo sounder depth measurements to a precision of .65 m (RMS), and that it can position measured depths to a precision of .74 m (RMS) relative to local control.     

Morphology of lake Waikaremoana,New Zealand,and reconnaissance of its benthic fauna

As shown by an extensive echo‐sounding survey, the morphology of Lake Waikaremoana is a drowned valley system; complex troughs and banks at the eastern end are consistent with infilling and damming by slip material. In September 1972, water temperatures were near isothermal (surface‐bottom, 9.3–8.8°c), and clarity measured by secchi disc averaged 12.2 m. Very fine‐grained clayey silts occur on the surface of sediments throughout the lake.

Five benthic dredging stations yielded ten groups of organisms; of these, oligocheates and gasteropods (Potamopyrgus antipodarum only) occurred most widely, to the greatest depths (248 m), and in the greatest numbers. Animals in the eight remaining groups were few and limited to shallower depths.     

Distribution of helminths in the digestive tracts of New Zealand freshwater eels 1. Distribution of digeneans

The distributions of Stegodexamene anguillae and Telogaster opisthorchis in Anguilla dieffenbachii and A. australis studied over two years are described. Peak occurrence of S. anguillae was in the anterior intestine, declining posteriorly, except for mature flukes under crowded conditions in A. dieffenbachii which predominated in the mid intestine, declining anteriorly and posteriorly. Peak occurrence of T. opisthorchis was in the rectum of A. australis and posterior intestine of A. dieffenbachii; occurrence declined anteriorly. Distributions appeared to be maintained by selective site segregation. Flukes moved down the tract, with or without subsequent loss, in both host species held live or examined after death. T. opisthorchis were lost before S. anguillae, and the larger mature flukes of both parasite species were lost before the less mobile immature flukes. Fluke loss from electric‐fished A. dieffenbachii was more rapid than from netted A. australis. Chilling and freezing retarded movement in, and evacuation from, dead hosts.     

Profiling Planctomycetales diversity with reference to anammox‐related bacteria in a South China Sea,deep‐sea sediment

A systematic assessment of Planctomycetales diversity in a South China Sea, deep‐sea sediment (1657 m) was conducted using the 16S rRNA gene analysis approach. PCR amplification of the samples from seven sediment layers (0.1, 1, 3, 5, 7, 9 and 11 m below the surface sediment) using the primer set Pla‐46‐F/1392‐R showed that the Planctomycetales existed within a limited range of sediment depths (≤ 5 m), and had a decreasing trend in diversity with increasing depth. The majority of the retrieved Pla‐46‐F/1392‐R sequences belonged to Pirellula‐related Planctomycetales, and two sequences retrieved from the 0.1‐m layer (GenBank accession numbers: DQ996944 and DQ996945 ) shared the same anammox‐related signature oligonucleotides and were closely related to commonly recognized anammox organisms. To identify new anammox‐related biomarkers, three primer sets were designed for amplifying the fragments of hydroxylamine oxidoreductase and S‐adenosylmethionine radical enzyme genes, but no related sequences were found. Our multiple 16S rRNA gene primer sets (Journal of Rapid Methods and Automation in Microbiology, 2008, in press) revealed even an higher diversity of Planctomycetales in the 0.1‐m layer of the sediment, especially at genus level. Our data profiled the distribution pattern of Planctomycetales diversity along sediment depths, and provided molecular evidence for the existence of anammox‐related bacteria in a new location, which broadens our understanding of Planctomycetales diversity in deep sea sediments.     

Oceanic exchange variability across the continental slope west coast,South Island,New Zealand

Current observations taken at depths between 630 and 830 m from the west coast South Island continental slope exhibit one‐ to four‐weekly periodicities superimposed on the semi‐diurnal tide. These variable flows at 630 m and otter large, longer‐timescale events have a significart onshore/offshore component of flow which leads to a similar transport of alongshore momentum and heat.     

Oxygen consumption and apnoea in the shortfin eel,Anguilla australis schmidtii

Patterns of ventilation, oxygen consumption (VO₂), blood gas tensions (PaO₂ and PaCO₂) and pH were determined in shortfin eels (Anguilla australis schmidtii (Phillips)). At rest, shortfin eels (average weight 646.5 ± 64.5 g) had a VO₂ of 20.4 ± 1.2 ml. kg^‐1.h^‐1 (n = 13) at 17.5 ± 0.2°c, with smaller fish having the highest metabolic rates. The frequency of ventilation was inversely proportional to body weight in both A. australis schmidtii and A. dieffenbachii. In air‐saturated water 10 eels exhibited periodic apnoea (mean duration 3.59 min); periods of ventilation were more variable in duration (mean 4.92 min). After 2.62 min of apnoea, the PaO₂ of dorsal aortic blood had fallen from 9.12 to 1.91 kPa. Thus, although the blood has a high affinity for oxygen and the haemoglobins are 30% oxygen‐saturated at this low PaO₂, the eel allows its blood to be significantly depleted in oxygen during apnoeic pauses at rest. When ventilating its gills at rest, PaO₂ does not approach the PO₂ of the inspired water. It is suggested that these features of respiration in eels result in a saving of metabolic costs involved in ventilation. The results are discussed in terms of the eel's ability to withstand hypoxic conditions.     

Blood oxygenation in shortfin eels during swimming and hypoxia: Influence of the root effect

Blood samples were withdrawn from dorsal aortic cannulae in shortfin eels before, during, and after acute exposure to hypoxia and to forced swimming. Both hypoxia (PIO₂ < 40 mm Hg) and forced swimming at 24 cm s^‐1 abolished apnoeic periods and increased ventilation. The fall in PaCO₂with hyperventilation, raised pH and thus increased the oxygen carrying capacity of arterial blood. The Root effect influences shortfin eel blood up to pH 8.0, at 17°C and has an effect on arterial oxygen content. It cannot be responsible for all of the increased oxygen content during swimming and in recovery from swimming and hypoxia; ventilatory and/or circulatory changes must account for the rest. Hypoxia, but not swimming, produced a rise in dorsal aortic blood pressure. The bradycardia of hypoxia was deeper than that which accompanies apnoeic periods in air‐saturated water.     

The intermingling of benthic macroinvertebrate communities during a period of shifting range: The “East of Nantucket” Atlantic Surfclam Survey and the existence of transient multiple stable states

A survey of the region eastward of Nantucket provided an opportunity to examine the cold temperate–boreal boundary along the high‐energy Great South Channel. Here described are the benthic macroinvertebrate community types encountered, with a focus on the influence of climate change on the range boundaries of the benthic biomass dominants and the potential existence of transient multiple stable states. The survey identified three primary community types. The shallowest sites were occupied by a surfclam‐dominated community, comprising an abundance of large (≥150 mm) surfclams, and a few common attached epibiota primarily attached to exposed surfclam shell. Two communities exist at intermediate depths, one dominated by submarket and small market‐size surfclams (<150 mm) and the other, created by mussel mats and their attendant epibiota, crabs, sea urchins, and other mobile epifauna. Mussels are a foundational species, establishing a hard‐bottom terrain conducive to these other denizens in soft‐bottom habitat. Cobbles were nearly ubiquitous, rocks were routinely recovered, and boulders were encountered occasionally. Slow growing attached epibionts were exceedingly rare and mobile epifauna were not obviously associated with these large sedimentary particles; nor were the surfclam or mussel communities. The frequency of barnacle scars suggests sediment scour under the high‐flow regime characteristic of the surveyed region, which voids the habitat potential of these sedimentary particles. The abundance of surfclam shell indicates that surfclams have inhabited the shoaler depths for an extended time; limited shell at deeper sites supports the inference from the absence of large animals that these sites are relatively newly colonized and represent further evidence of an offshore shift in range brought on by increasing bottom water temperatures. The dichotomous nature of the two primary community types at mid‐depths suggests that these two communities represent multiple stable states brought on by the interaction of an invading cold temperate species with the receding boreal fauna resulting in a transient intermingling of species, which, however, structure the habitat into exclusionary stable states rather than overlapping in a co‐occurrence ecotone.     

Fish trapping experiments in Northern New Zealand waters

Fish trapping experiments were carried out during 1973–75 along the north‐east coast of the North Island. The most effective trap type was the Z‐trap. Two sizes of Z‐trap were tested. Better results were obtained with the larger ones, which had an overall mean catch rate of 8.4 fish/trap day. The catch rate varied widely between areas, bottom types, and seasons. Best results were obtained in summer in depths greater than 20 m.     

A lightweight vertical rosette for deployment in ice-covered waters

A lightweight modular rosette system has been developed that can be launched and recovered from aircraft in ice-covered waters through a 12 in. diameter hole in the ice. The small diameter is achieved by the modular design, in which a CTD module is attached to the end of a conducting cable and water bottle modules (four 4-L bottles per module) are positioned vertically above it. A novel tripping mechanism based on melting a link of monofilament line is used to close the water bottles at the desired depths. After launching the rosette, the cast proceeds like a normal rosette cast with the traces of temperature, salinity, oxygen and other desired sensors being displayed on a computer screen during the down and up casts and tripping the bottles electronically at the desired depths on the up cast. A Seabird 19+ CTD and Seabird 43 oxygen sensor are mounted in the CTD module and data acquisition and bottle tripping are controlled using a Seabird 33 deck unit and Seabird's SeaSave software run on a laptop computer. Deployment and recovery are done in a heated tent attached to the aircraft to prevent the water from freezing. After recovery the bottle modules are placed in coolers with bags of snow to stabilize the cooler temperature close to 0 °C, which is within ±1.8 °C of the in situ temperature, and the modules are transported back to a base camp for subsampling and sample processing. This system has been used to collect over 250 water samples in the ice-covered Lincoln Sea and the quality of the samples for dissolved gases and other constituents has been excellent.     

Three-year investigations into sperm whale-fall ecosystems in Japan

We report the first study of sperm whale‐fall ecosystems, based on mass sinking of whale carcasses at shelf depths in the northwest Pacific. We conducted three observations over a 2‐year period on replicate sperm‐whale carcasses implanted at depths of 219–254 m off the southern part of Japan from July 2003 to August 2005. The study was made possible by a mass stranding of sperm whales in January 2002, and the subsequent sinking of 12 carcasses in the waters off Cape Nomamisaki. Dense aggregations of unique chemosynthesis‐based fauna had formed around the whale carcasses after 18 months (July 2003). The mytilid mussel Adipicola pacifica was the most abundant macrofaunal species and covered most of the exposed bone surfaces. The general composition of the fauna was similar to that of deep‐water reducing habitats, but none of the species appearing in this study has been found at hydrothermal vents, cold seeps or deep‐water whale falls. A new species of lancelet, which was the first record of the subphylum Cephalochordata from reducing environments, a new species of Osedax; a rarely encountered benthic ctenophore, and a rare gastropod species were discovered at this sperm whale‐fall site. Benthic communities were similar across all the carcasses studied, although the body sizes of the whales were very different. The succession of epifaunal communities was relatively rapid and the sulphophilic stage was considerably shorter than that of other known whale falls.     

Fluctuation in volume transport distribution accompanied by the Kuroshio front migration in the Tokara Strait

A relation between migration of the Kuroshio front and fluctuation of distribution of volume transport in the Tokara Strait was described, using sea level records at five tide gauge stations around the strait and data which were composed of sea surface temperature, XBT casts, sea surface salinity and velocities at 20 m, 75 m and 150 m depths taken en route a ferryboat. The Kuroshio front extends to about 150 m depth. The sea surface salinity and the horizontal velocities abruptly change at the front. There is a good correlation in a period range from half a month to two months between the migration of the front, which is not only at the surface but also in the subsurface, and the sea level fluctuation at Nakano-shima. A northward migration of the front with a period range from 17 to 50 days decreases the transport in the southern strait between Naze and Nakano-shima but increases in the northern strait between Nakano-shima and Sata-misaki. The northward migration intensifies inflow into Kagoshima Bay and the Ohsumi Branch Current. Correlation between the transport in the northern strait and the Ohsumi Branch Current is significant in the period range from 30 to 50 days. In this significant period range, the former leads the latter by about 3 days.     

Habitat use and longitudinal distribution patterns of native fish from a near pristine Stewart Island,New Zealand,stream

Distribution, abundance, and habitat preferences of native fish were investigated down the length of a relatively pristine, medium‐sized, fourth‐order stream on Stewart Island, New Zealand. A limited fish fauna was recorded (six species), including three threatened large galaxiid species (Galaxias argenteus, Galaxias fasciatus, and Galaxias brevipinnis), which have restricted distributions on mainland New Zealand. Results indicated that these large galaxiids occupy diverse habitats including pools and backwaters within the mainstems of this stream. Their extensive distributions and wide habitat usage were attributed to factors such as the intact catchment vegetation, unmodified stream channel, and the absence of introduced fishes, particularly salmonids. Results suggest that some native species have been excluded from mainstem habitats elsewhere in New Zealand. It was also evident that interactions among the native species influenced habitat use; G. brevipinnis avoided backwaters, runs, and pools in reaches occupied by G. fasciatus and Anguilla dieffenbachii; whereas G. fasciatus appeared to avoid habitats occupied by G. argenteus and A dieffenbachii. Maximum densities and biomass of galaxiids and eels occurred in deepwater habitats (>0.75 m). Furthermore the fish inhabiting these deeper waters were larger and more likely to be female. These findings have significant implications for the design and application of sampling protocols for native New Zealand fishes and for the protection of their habitats. If deeper waters are not sampled then species, sex, and size biased data may result.     

Community structure of infaunal macrobenthos around vestimentiferan thickets at the San Clemente cold seep,NE Pacific

The San Clemente cold seep lies within 100–200 km of other reducing habitats in the NE Pacific, offering an opportunity to compare diversity and species overlap among reducing habitats (i.e. whale‐, kelp‐, and wood‐falls) at similar depths within a single region. Video observations from the research submersible Alvin at the San Clemente seep (1800 m depth) indicated clumps (‘thickets’) of vestimentiferans distributed as meter‐scale patches interspersed with vesicomyid clam beds and black sediments. Sediment‐core samples were collected at distances of 0 to 80–200 m along randomly oriented transects radiating outward from vestimentiferan thickets to evaluate changes in macrofaunal community structure from thickets into the background community. Macrofaunal abundance was elevated at distances of 0–1 m compared to 80–200 m (i.e. the ‘background’ community). The tube‐building frenulate worms Siboglinum spp., along with peracarid crustaceans, dominated sediments within 1 m of vestimentiferan thickets. Species diversity was depressed within 1 m of thickets but with high rates of species accumulation, suggesting that seep sites greatly increase sediment heterogeneity and facilitate colonization by non‐background macrofaunal species. Stable isotope data indicate chemosynthetic nutrition for some dominant macrofaunal species within 1 m of tubeworm thickets. The macrofaunal community near vestimentiferan thickets in San Clemente seep contains intermediate levels of species richness and diversity compared to other deep‐sea seep areas in the northeast Pacific. There was low species overlap between the San Clemente seep macrofauna and communities in reducing habitats near wood‐, whale‐, and kelp‐falls at similar depths within the region, suggesting that seeps harbor a distinct infaunal community.     

Choice of reference surface for geostrophic currents around New Zealand

The depths of reference surfaces for determining geostrophic currents in the Tasman and South‐western Pacific Basins and in the Hikurangi Trench are examined using Defant's method for the determination of the “layer of no motion”. These depths are then checked by comparing the directions of the resulting currents with the direction of flow deduced from hydrological evidence and, in the Hikurangi Trench, from an examination of the correlation between surface currents and the mass field. On this basis the reference surface was found to be at 2300 dbars in the Tasman Basin, 2000–2500 dbars in the Southwestern Pacific Basin and >1500 dbars in the head of the Hikurangi Trench.     

Sedentary urchins influence benthic community composition below the macroalgal zone

Sea urchins are important ecosystem engineers in subtidal ecosystems worldwide, providing biogenic structure and altering nutrient dynamics through intensive grazing and drift algal capture. The current work evaluates red urchin (Strongylocentrotus franciscanus) density on fixed transects through time, individual displacement, and urchin‐associated benthic community composition using a field‐based approach at multiple depths (in and outside of the macroalgal zone) and replicated across sites in the San Juan Archipelago, Washington. Urchins exhibited no large‐scale, temporal or directional changes in density among depths. Furthermore, 87% of individual urchins observed in repeated small‐scale surveys over 3 weeks exhibited no change in position. Individual displacement was negatively correlated to drift algal capture. Evidence of sedentary behavior from the displacement surveys was supported by the sessile and mobile community composition in areas directly under versus adjacent to (control) urchins. The benthos under urchins had a higher percentage of bare space, crustose coralline algae, and increased density of snails, crabs and shrimp relative to associated control plots. Abundance of mobile organisms associating with urchins increased relative to control plots at the deepest survey depth (30 m), indicating a greater strength of interaction with distance from macroalgal production. This work presents evidence of food availability‐related behavior in red urchins and indicates that even when sedentary, urchins have a strong influence on ecosystem structure through increasing availability of shelter and macroalgal detritus to the benthos.     

Sediment depth and habitat as predictors of the diversity and composition of sediment bacterial communities in an inter‐tidal estuarine environment

Saltmarshes, seagrass meadows and mudflats are key habitats in estuarine ecosystems. Despite being involved in key ecological processes, the influence of different estuarine habitats on sediment bacterial communities remains understudied. Few studies have analysed and compared the bacterial communities of more than one estuarine habitat at different depths. Here, we investigated to what extent different habitats (mudflats; mono‐specific plots of seagrass [Zostera noltei] and two saltmarsh plants [Juncus maritimus and Spartina maritima]) and sampling depth (0, 5, 10 cm) influence variation in sediment bacterial composition. Our results showed significant differences in the abundance of selected higher taxa amongst habitats and depths. Surface sediment was characterized by bacteria assigned to the Acidimicrobiia, Flavobacteriia, Thiotrichales, Alteromonadales and Rhodobacterales, whereas in deeper sediment Deltaproteobacteria and Anaerolineae were dominant. Juncus sediment, in turn, presented the most distinct bacterial community, with Myxococcales abundant in this habitat. Sampling depth and habitat proved significant predictors of variation in sediment bacterial composition. The compositional dissimilarities amongst habitats and depths suggest functional divergence and complementarity, thus enhancing ecosystem functioning and health. Given the compositionally distinct communities found in different habitats and depths, our study corroborates the importance of conserving a diverse array of estuarine habitats.     

Monitoring the deep western boundary current in the western North Pacific by echo intensity measured with lowered acoustic Doppler current profiler

Oxidation of iron and manganese ions is predominant in the oxygen-rich deep western boundary current (DWBC) within the Pacific Ocean. By the faster removal of particulate iron hydroxide and manganese oxide, densities of the particulate matters are considered to be lower in the DWBC than the interior region. To detect the density variation of suspended particles between the DWBC and interior regions, we analyzed echo intensity (EI) measured in the western North Pacific by hydrographic casts with a 300 kHz lowered acoustic Doppler current profiler (LADCP) in a whole water column. At depths greater than 3000 m (~ 3000 dbar), EI is almost uniformly low between 12°N and 30°N but peaks sharply from 30°N to 35°N to a maximum north of 35°N. EI is found to be anomalously low in the DWBC compared to the background distribution. The DWBC pathways are identifiable by the low EI and high dissolved oxygen concentration. EI data by LADCPs and other acoustic instruments may be used to observe the temporal variations of the DWBC pathways.