The effects of discharge and slope on hyporheic flow in step‐pool morphologies

This paper focuses on surface–subsurface water exchange in a steep coarse‐bedded stream with a step‐pool morphology. We use both flume experiments and numerical modelling to investigate the influence of stream discharge, channel slope and sediment hydraulic conductivity on hyporheic exchange. The model step‐pool reach, whose topography is scaled from a natural river, consists of three step‐pool units with 0.1‐m step heights, discharges ranging between base and over‐bankfull flows (scaled values of 0.3–4.5 l/s) and slopes of 4% and 8%. Results indicate that the deepest hyporheic flow occurs with the steeper slope and at moderate discharges and that downwelling fluxes at the base of steps are highest at the largest stream discharges. In contrast to findings in a pool‐riffle morphology, those in this study show that steep slopes cause deeper surface–subsurface exchanges than gentle slopes. Numerical simulation results show that the portion of the hyporheic zone influenced by surface water temperature increases with sediment hydraulic conductivity. These experiments and numerical simulations emphasize the importance of topography, sediment permeability and roughness elements along the channel surface in governing the locations and magnitude of downwelling fluxes and hyporheic exchange. Our results show that hyporheic zones in these steep streams are thicker than previously expected by extending the results from streams with pool‐riffle bed forms. Copyright © 2014 John Wiley & Sons, Ltd.     

A Comparison of Hyporheic Transport at a Cross‐Vane Structure and Natural Riffle

While restoring hyporheic flowpaths has been cited as a benefit to stream restoration structures, little documentation exists confirming that constructed restoration structures induce comparable hyporheic exchange to natural stream features. This study compares a stream restoration structure (cross‐vane) to a natural feature (riffle) concurrently in the same stream reach using time‐lapsed electrical resistivity (ER) tomography. Using this hydrogeophysical approach, we were able to quantify hyporheic extent and transport beneath the cross‐vane structure and the riffle. We interpret from the geophysical data that the cross‐vane and the natural riffle induced spatially and temporally unique hyporheic extent and transport, and the cross‐vane created both spatially larger and temporally longer hyporheic flowpaths than the natural riffle. Tracer from the 4.67‐h injection was detected along flowpaths for 4.6 h at the cross‐vane and 4.2 h at the riffle. The spatial extent of the hyporheic zone at the cross‐vane was 12% larger than that at the riffle. We compare ER results of this study to vertical fluxes calculated from temperature profiles and conclude significant differences in the interpretation of hyporheic transport from these different field techniques. Results of this study demonstrate a high degree of heterogeneity in transport metrics at both the cross‐vane and the riffle and differences between the hyporheic flowpath networks at the two different features. Our results suggest that restoration structures may be capable of creating sufficient exchange flux and timescales of transport to achieve the same ecological functions as natural features, but engineering of the physical and biogeochemical environment may be necessary to realize these benefits.     

Patterns in stream longitudinal profiles and implications for hyporheic exchange flow at the H.J. Andrews Experimental Forest,Oregon, USA

There is a need to identify measurable characteristics of stream channel morphology that vary predictably throughout stream networks and that influence patterns of hyporheic exchange flow in mountain streams. In this paper we characterize stream longitudinal profiles according to channel unit spacing and the concavity of the water surface profile. We demonstrate that: (1) the spacing between zones of upwelling and downwelling in the beds of mountain streams is closely related to channel unit spacing; (2) the magnitude of the vertical hydraulic gradients (VHGs) driving hyporheic exchange flow increase with increasing water surface concavity, measured at specific points along the longitudinal profile; (3) channel unit spacing and water surface concavity are useful metrics for predicting how patterns in hyporheic exchange vary amongst headwater and mid‐order streams. We use regression models to describe changes in channel unit spacing and concavity in longitudinal profiles for 12 randomly selected stream reaches spanning 62 km² in the H.J. Andrews Experimental Forest in Oregon. Channel unit spacing increased significantly, whereas average water surface concavity (AWSC) decreased significantly with increasing basin area. Piezometer transects installed longitudinally in a subset of stream reaches were used to measure VHG in the hyporheic zone, and to determine the location of upwelling and downwelling zones. Predictions for median pool length and median distance between steps in piezometer reaches bracketed the median distance separating zones of upwelling in the stream bed. VHG in individual piezometers increased with increasing water surface concavity at individual points in the longitudinal profile along piezometer transects. Absolute values of VHG, averaged throughout piezometer transects, increased with increasing AWSC, indicating increased potential for hyporheic exchange flow. These findings suggest that average hyporheic flow path lengths increase—and the potential for hyporheic exchange flow in stream reaches decreases—along the continuum from headwater to mid‐order mountain streams. Copyright © 2005 John Wiley & Sons, Ltd.     

The hydraulic characteristics and geochemistry of hyporheic and parafluvial zones in Arctic tundra streams,north slope,Alaska

Sodium bromide and Rhodamine WT were used as conservative tracers to examine the hydrologic characteristics of seven tundra streams in Arctic Alaska, during the summers of 1994–1996. Continuous tracer additions were conducted in seven rivers ranging from 1st to 5th order with samples collected from instream, hyporheic, and parafluvial locations. Tracer data was used as input for a computer model to estimate hydrologic characteristics of each study reach. While solute concentrations during the tracer additions indicated that steady-state or “plateau” conditions had been reached, interstitial samples indicated that there were additional hyporheic and parafluvial zones that had not been fully labeled at the time of apparent steady state in the stream channel (plateau). Exchange between channel and hyporheic water was a function of location within a pool–riffle sequence, with rapid downwelling at the head of riffles and delayed upwelling in riffle tails. The extent of exchange between channel and hyporheic water was positively correlated with apparent streambed hydraulic conductivity. Tracer additions indicated interstitial velocities ranging from 0.030 to 0.075 cm s⁻¹ and hydraulic conductivities from 2.4 to 12.2 cm s⁻¹. Hyporheic and in-channel samples were collected for N, P, DO, and CO₂ analyses in conjunction with conservative tracer additions in four of the stream reaches for which the interstitial velocities were also determined. Transformation rates based on these data indicated that there was rapid nitrification of mineralized organic N and production of ammonium, phosphate, and carbon dioxide in the interstitial zones of all four reaches. Dissolved oxygen did not appear to be limiting in the reaches studied. The hyporheic zone of all four reaches was a source of nitrate, carbon dioxide, and ammonium to the channel water based on the average concentration of upwelling waters. Increased contact time with hyporheic and parafluvial zones was related to decreased temperature and increased conductivity. Net nitrogen flux from the hyporheic zone was equivalent to 14–162% of benthic N uptake requirements for the Kuparuk River. These observations are important because we expected that the presence of continuous permafrost in this Arctic environment would limit the importance of hyporheic processes, either physically (i.e., through the presence of a restricting thaw bulb in the permafrost) or biogeochemically (i.e., through low temperatures). Instead, we found that biogeochemical processes in the hyporheic zone of these Arctic streams are at least as important as it is in similar temperate stream ecosystems.     

Heterogeneity in ground water–surface water interactions in the hyporheic zone of a salmonid spawning stream

Spatial and temporal variability in ground water–surface water interactions in the hyporheic zone of a salmonid spawning stream was investigated. Four locations in a 150‐m reach of the stream were studied using hydrometric and hydrochemical tracing techniques. A high degree of hydrological connectivity between the riparian hillslope and the stream channel was indicated at two locations, where hydrochemical changes and hydraulic gradients indicated that the hyporheic zone was dominated by upwelling ground water. The chemistry of ground water reflected relatively long residence times and reducing conditions with high levels of alkalinity and conductivity, low dissolved oxygen (DO) and nitrate. At the other locations, connectivity was less evident and, at most times, the hyporheic zone was dominated by downwelling stream water characterized by high DO, low alkalinity and conductivity. Substantial variability in hyporheic chemistry was evident at fine (<10 m) spatial scales and changed rapidly over the course of hydrological events. The nature of the hydrochemical response varied among locations depending on the strength of local ground water influence. It is suggested that greater emphasis on spatial and temporal heterogeneity in ground water–surface water interactions in the hyporheic zone is necessary for a consideration of hydrochemical effects on many aspects of stream ecology. For example, the survival of salmonid eggs in hyporheic gravels varied considerably among the locations studied and was shown to be associated with variation in interstitial chemistry. River restoration schemes and watershed management strategies based only on the surface expression of catchment characteristics risk excluding consideration of potentially critical subsurface processes. Copyright © 2002 John Wiley & Sons, Ltd.     

A modelling study of hyporheic exchange pattern and the sequence,size, and spacing of stream bedforms in mountain stream networks,Oregon, USA

Studies of hyporheic exchange flows have identified physical features of channels that control exchange flow at the channel unit scale, namely slope breaks in the longitudinal profile of streams that generate subsurface head distributions. We recently completed a field study that suggested channel unit spacing in stream longitudinal profiles can be used to predict the spacing between zones of upwelling (flux of hyporheic water into the stream) and downwelling (flux of stream water into the hyporheic zone) in the beds of mountain streams. Here, we use two‐dimensional groundwater flow and particle tracking models to simulate vertical and longitudinal hyporheic exchange along the longitudinal axis of stream flow in second‐, third‐, and fourth‐order mountain stream reaches. Modelling allowed us to (1) represent visually the effect that the shape of the longitudinal profile has on the flow net beneath streambeds; (2) isolate channel unit sequence and spacing as individual factors controlling the depth that stream water penetrates the hyporheic zone and the length of upwelling and downwelling zones; (3) evaluate the degree to which the effects of regular patterns in bedform size and sequence are masked by irregularities in real streams. We simulated hyporheic exchange in two sets of idealized stream reaches and one set of observed stream reaches. Idealized profiles were constructed using regression equations relating channel form to basin area. The size and length of channel units (step size, pool length, etc.) increased with increasing stream order. Simulations of hyporheic exchange flows in these reaches suggested that upwelling lengths increased (from 2·7 m to 7·6 m), and downwelling lengths increased (from 2·9 m to 6·0 m) with increase in stream order from second to fourth order. Step spacing in the idealized reaches increased from 5·3 m to 13·7 m as stream size increased from second to fourth order. Simulated downwelling lengths increased from 4·3 m in second‐order streams to 9·7 m in fourth‐order streams with a POOL–RIFFLE–STEP channel unit sequence, and increased from 2·5 m to 6·1 m from second‐ to fourth‐order streams with a POOL–STEP–RIFFLE channel unit sequence. Upwelling lengths also increased with stream order in these idealized channels. Our results suggest that channel unit spacing, size, and sequence are all important in determining hyporheic exchange patterns of upwelling and downwelling. Though irregularities in the size and spacing of bedforms caused flow nets to be much more complex in surveyed stream reaches than in idealized stream reaches, similar trends emerged relating the average geomorphic wavelength to the average hyporheic wavelength in both surveyed and idealized reaches. This article replaces a previously published version (Hydrological Processes, 19 (17), 2915–2929 (2005) [ DOI:10.1002/hyp.5790 ]. See also retraction notice DOI:10.1002/hyp.6350 Copyright © 2006 John Wiley & Sons, Ltd.     

Retracted and replaced: A modelling study of hyporheic exchange pattern and the sequence,size, and spacing of stream bedforms in mountain stream networks,Oregon, USA

This article has been retracted and replaced. See Retraction and Replacement Notice DOI: 10.1002/hyp.6350 Studies of hyporheic exchange flows have identified physical features of channels that control exchange flow at the channel unit scale, namely slope breaks in the longitudinal profile of streams that generate subsurface head distributions. We recently completed a field study that suggested channel unit spacing in stream longitudinal profiles can be used to predict the spacing between zones of upwelling (flux of hyporheic water into the stream) and downwelling (flux of stream water into the hyporheic zone) in the beds of mountain streams. Here, we use two‐dimensional groundwater flow and particle tracking models to simulate vertical and longitudinal hyporheic exchange along the longitudinal axis of stream flow in second‐, third‐, and fourth‐order mountain stream reaches. Modelling allowed us to (1) represent visually the effect that the shape of the longitudinal profile has on the flow net beneath streambeds; (2) isolate channel unit sequence and spacing as individual factors controlling the depth that stream water penetrates the hyporheic zone and the length of upwelling and downwelling zones; (3) evaluate the degree to which the effects of regular patterns in bedform size and sequence are masked by irregularities in real streams. We simulated hyporheic exchange in two sets of idealized stream reaches and one set of observed stream reaches. Idealized profiles were constructed using regression equations relating channel form to basin area. The size and length of channel units (step size, pool length, etc.) increased with increasing stream order. Simulations of hyporheic exchange flows in these reaches suggested that upwelling lengths increased (from 2·7 m to 7·6 m), and downwelling lengths increased (from 2·9 m to 6·0 m) with increase in stream order from second to fourth order. Step spacing in the idealized reaches increased from 5·3 m to 13·7 m as stream size increased from second to fourth order. Simulated upwelling lengths increased from 4·3 m in second‐order streams to 9·7 m in fourth‐order streams with a POOL–RIFFLE–STEP channel unit sequence, and increased from 2·5 m to 6·1 m from second‐ to fourth‐order streams with a POOL–STEP–RIFFLE channel unit sequence. Downwelling lengths also increased with stream order in these idealized channels. Our results suggest that channel unit spacing, size, and sequence are all important in determining hyporheic exchange patterns of upwelling and downwelling. Though irregularities in the size and spacing of bedforms caused flow nets to be much more complex in surveyed stream reaches than in idealized stream reaches, similar trends emerged relating the average geomorphic wavelength to the average hyporheic wavelength in both surveyed and idealized reaches. Copyright © 2005 John Wiley & Sons, Ltd.     

Thermal‐infrared remote sensing of surface water–groundwater exchanges in a restored anastomosing channel (Upper Rhine River,France)

Ecohydrological processes are a key element to consider in functional river restorations. In the framework of a LIFE+ European restoration program, we have investigated the potential for airborne thermal‐infrared remote sensing to map surface water–groundwater exchanges and to identify their driving factors. We focused our attention on anastomosing channels on an artificial island of the Upper Rhine River (Rohrschollen), where a new channel was excavated from the floodplain to reconnect an older channel in its upstream part. These hydraulic engineering works led to an increased inflow from the Rhine Canal. Here, we propose an original data treatment chain to (a) georeference the thermal‐infrared images in geographic information system based on visible images, (b) detect and correct data errors, and (c) identify and locate thermal anomalies attributed to groundwater inputs and hyporheic upwellings. Our results, which have been compared to morpho‐sedimentary data, show that groundwater upwelling in the new channel is controlled by riffle–pool sequences and bars. This channel is characterized by large bedload transport and morphodynamic activity, forming riffles and bars. In the old channel, where riffle–pool sequences no longer exist, due to impacts of engineering works and insufficient morphodynamic effects of the restoration, thermal anomalies appeared to be less pronounced. Groundwater inputs seem to be controlled by former gravel bars outcropping on the banks, as well as by local thinning of the low‐permeability clogging layer on the channel bed.     

Surface water–groundwater interaction at restored streams and associated reference reaches

Stream restoration goals include improving habitat and water quality through reconstruction of morphological features found at analogous, pristine stream reaches. Enhancing hyporheic exchange may facilitate achieving these goals. Although hyporheic exchange at restoration sites has been explored in a few previous studies, comparative studies of restored versus reference or control streams are largely absent. We hypothesized that restoration cross‐vanes enhance hyporheic exchange, resulting in biogeochemical alteration of stream water chemistry in the streambed. Two streams restored using cross‐vanes to control erosion and improve habitat were compared with their associated reference reaches, which provided the basis for the restoration design. Thirteen temperature profile rods with vertically stacked sensors were installed at each site for 2 weeks. Heat tracing was used to quantify vertical flux in the streambed from the diurnal temperature fluctuations in the subsurface. Stream water and bed pore waters from mini‐piezometers were analysed for ion and nutrient chemistry. In general, mean vertical flux rates through the streambed were small throughout reference sites (?0.3 to 0.3 m/day) and at most locations at restored sites. Immediately adjacent to cross‐vanes, vertical flux rates were larger (up to 3.5 m/day). Geochemistry of pore waters shows distinct differences in the sources for the reference and restored sites. Strong downwelling zones adjacent to cross‐vanes showed high dissolved oxygen (10.75 mg/l) and geochemistry in the streambed similar to surface water. Reference sites had lower dissolved oxygen in the streambed (0.66–5.14 mg/l), and geochemical patterns suggest a mixture of discharging groundwater and surface water in the hyporheic zone. Restored sites also clearly show sulfate and nitrate reduction occurring in the streambed, which is not observed at the reference sites. The stream restoration sites studied here enhance rapid hyporheic exchange, but upwelling of groundwater has a stronger influence on streambed geochemistry at reference sites. Copyright © 2012 John Wiley & Sons, Ltd.     

Temporal and spatial response of hyporheic zone geochemistry to a storm event

Although there has been recent focus on understanding spatial variability in hyporheic zone geochemistry across different morphological units under baseflow conditions, less attention has been paid to temporal responses of hyporheic zone geochemistry to non‐steady‐state conditions. We documented spatial and temporal variability of hyporheic zone geochemistry in response to a large‐scale storm event, Tropical Storm Irene (August 2011), across a pool–riffle–pool sequence along Chittenango Creek in Chittenango, NY, USA. We sampled stream water as well as pore water at 15 cm depth in the streambed at 14 locations across a 30 m reach. Sampling occurred seven times at daily intervals: once during baseflow conditions, once during the rising limb of the storm hydrograph, and five times during the receding limb. Principal component analysis was used to interpret temporal and spatial changes and dominant drivers in stream and pore water geochemistry (n = 111). Results show the majority of spatial variance in hyporheic geochemistry (62%) is driven by differential mixing of stream and ground water in the hyporheic zone. The second largest driver (17%) of hyporheic geochemistry was temporal dilution and enrichment of infiltrating stream water during the storm. Hyporheic sites minimally influenced by discharging groundwater (‘connected’ sites) showed temporal changes in water chemistry in response to the storm event. Connected sites within and upstream of the riffle reflected stream geochemistry throughout the storm, whereas downstream sites showed temporally lagged responses in some conservative and biogeochemically reactive solutes. This suggests temporal changes in hyporheic geochemistry at these locations reflect a combination of changes in infiltrating stream chemistry and hyporheic flowpath length and residence time. The portion of the study area strongly influenced by groundwater discharge increased in size throughout the storm, producing elevated Ca²⁺ and concentrations in the streambed, suggesting zones of localized groundwater inputs expand in response to storms. Copyright © 2013 John Wiley & Sons, Ltd.     

Hydrological influences on hyporheic water quality: implications for salmon egg survival

The spatial and temporal variability of groundwater–surface‐water (GW–SW) interactions was investigated in an intensively utilized salmon spawning riffle. Hydrochemical tracers, were used along with high‐resolution hydraulic head and temperature data to assess hyporheic dynamics. Surface and subsurface hydrochemistry were monitored at three locations where salmon spawning had been observed in previous years. Temperature and hydraulic head were monitored in three nests of three piezometers located to characterize the head, the run and the tail‐out of the riffle feature. Hydrochemical gradients between surface and subsurface water indicated increasing GW influence with depth into the hyporheic zone. Surface water was characterized by high dissolved oxygen (DO) concentrations, low alkalinity and conductivity. Hyporheic water was generally characterized by high levels of alkalinity and conductivity indicative of longer residence times, and low DO, indicative of reducing conditions. Hydrochemical and temperature gradients varied spatially over the riffle in response to changes in local GW–SW interactions at the depths investigated. Groundwater inputs dominated the head and tail of the riffle. The influence of SW increased in the area of accelerating flow and decreasing water depth through the run of the riffle. Temporal GW–SW interactions also varied in response to changing hydrological conditions. Gross changes in hyporheic hydrochemistry were observed at the weekly scale in response to changing flow conditions and surface water inputs to the hyporheic zone. During low flows, caused by freezing or dry weather, hyporheic hydrochemistry was dominated by GW inputs. During higher flows hyporheic hydrochemistry indicated that SW contributions increased. In addition, high‐resolution hydraulic head data indicated that rapid changes in GW–SW interactions occurred during hydrological events. The spatial, and possibly the temporal, variability of GW–SW interactions had a marked effect on the survival of salmon ova. It is concluded that hyporheic dynamics and their effect on stream ecology should be given increased consideration by fisheries and water resource managers. Copyright © 2004 John Wiley & Sons, Ltd.     

The role of the hyporheic zone across stream networks

Many hyporheic papers state that the hyporheic zone is a critical component of stream ecosystems, and many of these papers focus on the biogeochemical effects of the hyporheic zone on stream solute loads. However, efforts to show such relationships have proven elusive, prompting several questions: Are the effects of the hyporheic zone on stream ecosystems so highly variable in place and time (or among streams) that a consistent relationship should not be expected? Or, is the hyporheic zone less important in stream ecosystems than is commonly expected? These questions were examined using data from existing groundwater modelling studies of hyporheic exchange flow at five sites in a fifth‐order, mountainous stream network. The size of exchange flows, relative to stream discharge (Q_HEF:Q), was large only in very small streams at low discharge (area ≈ 100 ha; Q < 10 l/s). At higher flows (flow exceedance probability > 0·7) and in all larger streams, Q_HEF:Q was small. These data show that biogeochemical processes in the hyporheic zone of small streams can substantially influence the stream's solute load, but these processes become hydrologically constrained at high discharge or in larger streams and rivers. The hyporheic zone may influence stream ecosystems in many ways, however, not just through biogeochemical processes that alter stream solute loads. For example, the hyporheic zone represents a unique habitat for some organisms, with patterns and amounts of upwelling and downwelling water determining the underlying physiochemical environment of the hyporheic zone. Similarly, hyporheic exchange creates distinct patches of downwelling and upwelling. Upwelling environments are of special interest, because upwelling water has the potential to be thermally or chemically distinct from stream water. Consequently, micro‐environmental patches created by hyporheic exchange flows are likely to be important to biological and ecosystem processes, even if their impact on stream solute loads is small. Published in 2011 by John Wiley & Sons, Ltd.     

Hyporheic exchange flows induced by constructed riffles and steps in lowland streams in southern Ontario,Canada

Stream–subsurface water interaction induced by natural riffles and constructed riffles/steps was examined in lowland streams in southern Ontario, Canada. The penetration of stream water into the subsurface was analysed using hydrometric data, and the zone of > 10% stream water was calculated from a chemical mixing equation using tracer injection of bromide and background chloride concentrations. The constructed riffles studied induced more extensive hyporheic exchange than the natural riffles because of their steeper longitudinal hydraulic head gradients and coarser streambed sediments. The depth of > 10% stream water zone in a small and a large constructed riffle extended to > 0·2 m and > 1·4 m depths respectively. Flux and residence time distribution of hyporheic exchange were simulated in constructed riffles using MODFLOW, a finite‐difference groundwater flow model. Hyporheic flux and residence time distribution varied along the riffles, and the exchange occurring upstream from the riffle crest was small in flux and had a long residence time. In contrast, hyporheic exchange occurring downstream from the riffle crest had a relatively short residence time and accounted for 83% and 70% of total hyporheic exchange flow in a small and large riffle respectively. Although stream restoration projects have not considered the hyporheic zone, our data indicate that constructed riffles and steps can promote vertical hydrologic exchange and increase the groundwater–surface water linkage in degraded lowland streams. Copyright © 2006 John Wiley & Sons, Ltd.     

Beaver dam analogues drive heterogeneous groundwater–surface water interactions

Beaver dam analogues (BDAs) are a cost-effective stream restoration approach that leverages the recognized environmental benefits of natural beaver dams on channel stability and local hydrology. Although natural beaver dams are known to exert considerable influence on the hydrologic conditions of a stream system by mediating geomorphic processes, nutrient cycling, and groundwater–surface water interactions, the impacts of beaver-derived restoration methods on groundwater–surface water exchange are poorly characterized. To address this deficit, we monitored hyporheic exchange fluxes and streambed porewater biogeochemistry across a sequence of BDAs installed along a central Wyoming stream during the summer of 2019. Streambed fluxes were quantified by heat tracing methods and vertical hydraulic gradients. Biogeochemical activity was evaluated using major ion porewater chemistry and principal component analysis. Vertical fluxes of approximately 1.0 m/day were observed around the BDAs, as was the development of spatially heterogeneous zones of nitrate production, groundwater upwelling, and anaerobic reduction. Strong contrasts in hyporheic zone processes were observed across BDAs of differing sizes. This suggests that structures may function with size-dependent behaviour, only altering groundwater–surface water interactions after a threshold hydraulic step height is exceeded. Patterns of hyporheic exchange and biogeochemical cycling around the studied BDAs resemble those around natural beaver dams, suggesting that BDAs may provide comparable benefits to channel complexity and near-stream function over a 1-year period.     

Thermal regime of a headwater stream within a clear‐cut,coastal British Columbia,Canada

This study examined the thermal regime of a headwater stream within a clear‐cut. The stream had a complex morphology dominated by step–pool features, many formed by sediment accumulation upstream of woody debris. Maximum daily temperatures increased up to 5 °C after logging, and were positively associated with maximum daily air temperature and negatively with discharge. Maximum daily temperatures generally increased with downstream distance through the cut block, but decreased with distance in two segments over distances of tens of metres, where the topography indicated relatively concentrated lateral inflow. Localized cool areas within a step–pool unit were associated with zones of concentrated upwelling. Bed temperatures tended to be higher and have greater ranges in areas of downwelling flow into the bed. Heat budget estimates were made using meteorological measurements over the water surface and a model of net radiation using canopy characteristics derived from fisheye photography. Heat exchange driven by hyporheic flow through the channel step was a cooling effect during daytime, with a magnitude up to approximately 25% that of net radiation during the period of maximum daytime warming. Heat budget calculations in these headwater streams are complicated by the heterogeneity of incident solar radiation and channel geometry, as well as uncertainty in estimating heat and water exchanges between the stream and the subsurface via hyporheic exchange and heat conduction. Copyright © 2005 John Wiley & Sons, Ltd.     

Sediment routing hypothesis for pool‐riffle maintenance

This paper provides comprehensive evidence that sediment routing around pools is a key mechanism for pool‐riffle maintenance in sinuous upland gravel‐bed streams. The findings suggest that pools do not require a reversal in energy for them to scour out any accumulated sediments, if little or no sediments are fed into them. A combination of clast tracing using passive integrated transponder (PIT) tagging and bedload traps (positioned along the thalweg on the upstream riffle, pool entrance, pool exit and downstream riffle) are used to provide information on clast pathways and sediment sorting through a single pool‐riffle unit. Computational fluid dynamics (CFD) is also used to explore hydraulic variability and flow pathways. Clast tracing results provide a strong indication that clasts are not fed through pools, rather they are transported across point bar surfaces, or around bar edges (depending upon previous clast position, clast size, and event magnitude). Spatial variations in bedload transport were found throughout the pool‐riffle unit. The pool entrance bedload trap was often found to be empty, when the others had filled, further supporting the notion that little or no sediment was fed into the pool. The pool exit slope trap would occasionally fill with sediment, thought to be sourced from the eroding outer bank. CFD results demonstrate higher pool shear stresses (τ ≈ 140 N m^–2) in a localized zone adjacent to an eroding outer bank, compared to the upstream and downstream riffles (τ ≈ 60 N m^–2) at flows of 6 · 2 m³ s^–1 (≈ 60% of the bankfull discharge) and above. There was marginal evidence for near‐bed velocity reversal. Near‐bed streamlines, produced from velocity vectors indicate that flow paths are diverted over the bar top rather than being fed through the thalweg. Some streamlines appear to brush the outer edge of the pool for the 4 · 9 m³ s^–1 to 7 · 8 m³ s^–1 (between 50 and 80% of the bankfull discharge) simulations, however complete avoidance was found for discharges greater than this. Copyright © 2013 John Wiley & Sons, Ltd.     

Methane in the hyporheic zone of a small lowland stream (Sitka, Czech Republic)

Methane concentrations and selected chemical parameters in interstitial water were examined along subsurface flowpath in two subsystems (hyporheic and parafluvial sediments) in the Sitka stream, Czech Republic. Interstitial methane concentrations exhibited a distinct spatial pattern. In the hyporheic downwelling zone where the sediments are relatively well oxygenated due to high hydrologic exchange with the surface water, low interstitial methane concentrations, averaging 9.3 μg CH₄/l, were found. In contrast, upwelling sediments and parafluvial sediments (active channel sediments lateral to the wetted channel) had significantly higher methane concentrations (p < 0.05, and p < 0.01, respectively), averaging 43.2 μg CH₄/l and 160.5 μg CH₄/l, respectively. Dissolved oxygen was the highest where surface water entered hyporheic/parafluvial sediments and decreased with water residence time in the sediments (p < 0.01). Nitrate concentrations decreased along the flowpath and were significantly lower at downstream end of the riffle (p < 0.001). Sulfate concentrations also show a slight decline with the water residence time, but differences were not significant. Effect of both nitrate and sulfate on methanogenesis is also discussed. The interstitial methane concentration significantly increased with surface water temperature (p < 0.001) and was negatively correlated with redox potential (p < 0.01) and dissolved oxygen (p < 0.05).     

Temporal Hyporheic Zone Response to Water Table Fluctuations

Expansion and contraction of the hyporheic zone due to temporal hydrologic changes between stream and riparian aquifer influence the biogeochemical cycling capacity of streams. Theoretical studies have quantified the control of groundwater discharge on the depth of the hyporheic zone; however, observations of temporal groundwater controls are limited. In this study, we develop the concept of groundwater‐dominated differential hyporheic zone expansion to explain the temporal control of groundwater discharge on the hyporheic zone in a third‐order stream reach flowing through glacially derived terrain typical of the Great Lakes region. We define groundwater‐dominated differential expansion of the hyporheic zone as: differing rates and magnitudes of hyporheic zone expansion in response to seasonal vs. storm‐related water table fluctuation. Specific conductance and vertical hydraulic gradient measurements were used to map changes in the hyporheic zone during seasonal water table decline and storm events. Planar and riffle beds were monitored in order to distinguish the cause of increasing hyporheic zone depth. Planar bed seasonal expansion of the hyporheic zone was of a greater magnitude and longer in duration (weeks to months) than storm event expansion (hours to days). In contrast, the hyporheic zone beneath the riffle bed exhibited minimal expansion in response to seasonal groundwater decline compared to storm related expansion. Results indicated that fluctuation in the riparian water table controlled seasonal expansion of the hyporheic zone along the planar bed. This groundwater induced hyporheic zone expansion could increase the potential for biogeochemical cycling and natural attenuation.     

Riffle‐pool morphometry and stage‐dependant morphodynamics of a large floodplain river (Vereinigte Mulde,Sachsen‐Anhalt,Germany)

Riffle‐pool sequences are a common feature of gravel‐bed rivers. However, mechanisms of their generation and maintenance are still not fully understood. In this study a monitoring approach is employed that focuses on analysing cross‐sectional and longitudinal channel geometry of a large floodplain river (Vereinigte Mulde, Sachsen‐Anhalt, Germany) with a high temporal and spatial resolution, in order to conclude from stage‐dependant morphometric changes to riffle and pool maintaining processes. In accordance with previous authors, pool cross‐sections of the Mulde River are narrow and riffle cross‐sections are wide suggesting that they should rather be addressed as two general types of channel cross‐sections than solely as bedforms. At high flows, riffles and pools in the study reaches changed in length and height but not in position. Pools were scoured and riffles aggraded, a development which was reversed during receding flows below the threshold of 0·4Q_bf (40% bankfull discharge). An index for the longitudinal amplitude of riffle‐pool sequences, the bed undulation intensity or bedform amplitude, is introduced and proved to be highly significant as a form parameter, its first derivative as a process parameter. The process of pool scour and riffle fill is addressed as bedform maintenance or bedform accentuation. It is indicated by increasing longitudinal bed amplitudes. According to the observed dynamics of bed amplitudes, maintenance of riffle‐pool sequences lags behind discharge peaks. Maximum bed amplitudes may be reached with a delay of several days after peak discharges. Increasing bed undulation intensity is interpreted to indicate bed mobility. Post‐flood decrease of the bed undulation intensity indicates a retrograde phase when transport from pools to riffles has ceased and bed mobility is restricted to riffle tails and heads of pools. This type of transport behaviour is referred to as disconnected mobility. The comparison of two river reaches, one with undisturbed sediment supply, the other with sediment deficit, suggests that high bed undulation intensity values at low flows indicate sediment deficit and potentially channel degrading conditions. It is more generally hypothesized that channel bed undulations constitute a major component of form roughness and that increased bed amplitudes are an important feature of channel bed adjustment to sediment deficit be it temporally during late floods or permanently due to a supply limitation of bedload. Copyright © 2011 John Wiley & Sons, Ltd.