Remote estimation of nitrogen and chlorophyll contents in maize at leaf and canopy levels

Leaf and canopy nitrogen (N) status relates strongly to leaf and canopy chlorophyll (Chl) content. Remote sensing is a tool that has the potential to assess N content at leaf, plant, field, regional and global scales. In this study, remote sensing techniques were applied to estimate N and Chl contents of irrigated maize (Zea mays L.) fertilized at five N rates. Leaf N and Chl contents were determined using the red-edge chlorophyll index with R² of 0.74 and 0.94, respectively. Results showed that at the canopy level, Chl and N contents can be accurately retrieved using green and red-edge Chl indices using near infrared (780–800 nm) and either green (540–560 nm) or red-edge (730–750 nm) spectral bands. Spectral bands that were found optimal for Chl and N estimations coincide well with the red-edge band of the MSI sensor onboard the near future Sentinel-2 satellite. The coefficient of determination for the relationships between the red-edge chlorophyll index, simulated in Sentinel-2 bands, and Chl and N content was 0.90 and 0.87, respectively.     

Evaluating the capabilities of Sentinel-2 for quantitative estimation of biophysical variables in vegetation

The red edge position (REP) in the vegetation spectral reflectance is a surrogate measure of vegetation chlorophyll content, and hence can be used to monitor the health and function of vegetation. The Multi-Spectral Instrument (MSI) aboard the future ESA Sentinel-2 (S-2) satellite will provide the opportunity for estimation of the REP at much higher spatial resolution (20 m) than has been previously possible with spaceborne sensors such as Medium Resolution Imaging Spectrometer (MERIS) aboard ENVISAT. This study aims to evaluate the potential of S-2 MSI sensor for estimation of canopy chlorophyll content, leaf area index (LAI) and leaf chlorophyll concentration (LCC) using data from multiple field campaigns. Included in the assessed field campaigns are results from SEN3Exp in Barrax, Spain composed of 35 elementary sampling units (ESUs) of LCC and LAI which have been assessed for correlation with simulated MSI data using a CASI airborne imaging spectrometer. Analysis also presents results from SicilyS2EVAL, a campaign consisting of 25 ESUs in Sicily, Italy supported by a simultaneous Specim Aisa-Eagle data acquisition. In addition, these results were compared to outputs from the PROSAIL model for similar values of biophysical variables in the ESUs. The paper in turn assessed the scope of S-2 for retrieval of biophysical variables using these combined datasets through investigating the performance of the relevant Vegetation Indices (VIs) as well as presenting the novel Inverted Red-Edge Chlorophyll Index (IRECI) and Sentinel-2 Red-Edge Position (S2REP). Results indicated significant relationships between both canopy chlorophyll content and LAI for simulated MSI data using IRECI or the Normalised Difference Vegetation Index (NDVI) while S2REP and the MERIS Terrestrial Chlorophyll Index (MTCI) were found to have the strongest correlation for retrieval of LCC.     

SENTINEL-2A red-edge spectral indices suitability for discriminating burn severity

Fires are a problematic and recurrent issue in Mediterranean ecosystems. Accurate discrimination between burn severity levels is essential for the rehabilitation planning of burned areas. Sentinel-2A MultiSpectral Instrument (MSI) record data in three red-edge wavelengths, spectral domain especially useful on agriculture and vegetation applications. Our objective is to find out whether Sentinel-2A MSI red-edge wavelengths are suitable for burn severity discrimination. As study area, we used the 2015 Sierra Gata wildfire (Spain) that burned approximately 80 km². A Copernicus Emergency Management Service (EMS)-grading map with four burn severity levels was considered as reference truth. Cox and Snell, Nagelkerke and McFadde pseudo-R² statistics obtained by Multinomial Logistic Regression showed the superiority of red-edge spectral indices (particularly, Modified Simple Ratio Red-edge, Chlorophyll Index Red-edge, Normalized Difference Vegetation Index Red-edge) over conventional spectral indices. Fisher's Least Significant Difference test confirmed that Sentinel-2A MSI red-edge spectral indices are adequate to discriminate four burn severity levels.     

Sentinel-2数据的冬小麦地上干生物量估算及评价

作物生物量快速精确的监测对于农业资源的合理利用与农田的精准管理具有重要意义。近年来,遥感技术因其独特的优势已被广泛用于作物生物量的估算中。本文主要针对不同宽波段植被指数在冬小麦生物量(文中的生物量均是指地上干生物量)估算方面的表现进行探索。首先利用欧洲空间局最新的Sentinel-2A卫星数据提取出17种常见的植被指数,之后分别构建其与相应时期内采集的冬小麦地上生物量间的最优估算模型,通过分析两者间的相关性与敏感性,获取适宜进行生物量估算的指数。最后,绘制了研究区的生物量空间分布图。结果表明,所选的植被指数均与生物量显著相关。其中,红边叶绿素指数(CI_(re))与生物量的估算精度最高(决定性系数R~2为0.83;均方根误差RMSE为180.29 g·m~(–2))。虽然相关性较高,但部分指数,如归一化差值植被指数(NDVI)等在生物量较高时会出现饱和现象,从而导致生物量的低估。而加入红边波段的指数不仅能够延缓指数的饱和趋势,而且能够提高反演精度。此外,通过敏感性分析发现,归一化差值指数和比值指数分别在作物生长的早期和中后期对生物量的变化保持较高的敏感性。由于红边比值指数(SR_(re))和MERIS叶绿素敏感指数(MTCI)在冬小麦全生长季内一直对生物量的变化保持高灵敏性,二者是生物量估算中最为稳定的指数。     

Brown and green LAI mapping through spectral indices

When crops senescence, leaves remain until they fall off or are harvested. Hence, leaf area index (LAI) stays high even when chlorophyll content degrades to zero. Current LAI approaches from remote sensing techniques are not optimized for estimating LAI of senescent vegetation. In this paper a two-step approach has been proposed to realize simultaneous LAI mapping over green and senescent croplands. The first step separates green from brown LAI by means of a newly proposed index, ‘Green Brown Vegetation Index (GBVI)’. This index exploits two shortwave infrared (SWIR) spectral bands centred at 2100 and 2000 nm, which fall right in the dry matter absorption regions, thereby providing positive values for senescent vegetation and negative for green vegetation. The second step involves applying linear regression functions based on optimized vegetation indices to estimate green and brown LAI estimation respectively. While the green LAI index uses a band in the red and a band in the red-edge, the brown LAI index uses bands located in the same spectral region as GBVI, i.e. an absorption band located in the region of maximum absorption of cellulose and lignin at 2154 nm, and a reference band at 1635 nm where the absorption of both water and dry matter is low. The two-step approach was applied to a HyMap image acquired over an agroecosystem at the agricultural site Barrax, Spain.     

Comparing methods for mapping canopy chlorophyll content in a mixed mountain forest using Sentinel-2 data

The Sentinel-2 Multi-Spectral Imager (MSI) has three spectral bands centered at 705, 740, and 783 nm wavelengths that exploit the red-edge information useful for quantifying plant biochemical traits. This sensor configuration is expected to improve the prediction accuracy of vegetation chlorophyll content. In this work, we assessed the performance of several statistical and physical-based methods in retrieving canopy chlorophyll content (CCC) from Sentinel-2 in a heterogeneous mixed mountain forest. Amongst the algorithms presented in the literature, 13 different vegetation indices (VIs), a non-parametric statistical approach, and two radiative transfer models (RTM) were used to assess the CCC prediction accuracy. A field campaign was conducted in July 2017 to collect in situ measurements of CCC in Bavarian forest national park, and the cloud-free Sentinel-2 image was acquired on 13 July 2017. The leave-one-out cross-validation technique was used to compare the VIs and the non-parametric approach. Whereas physical-based methods were calibrated using simulated data and validated using the in situ reference dataset. The statistical-based approaches, such as the modified simple ratio (mSR) vegetation index and the partial least square regression (PLSR) outperformed all other techniques. As such the modified simple ratio (mSR3) (665, 865) gave the lowest cross-validated RMSE of 0.21 g/m² (R² = 0.75). The PLSR resulted in the highest R² of 0.78, and slightly higher RMSE =0.22 g/m² than mSR3. The physical-based approach-INFORM inversion using look-up table resulted in an RMSE =0.31 g/m², and R² = 0.67. Although mapping CCC using these methods revealed similar spatial distribution patterns, over and underestimation of low and high CCC values were observed mainly in the statistical approaches. Further validation using in situ data from different terrestrial ecosystems is imperative for both the statistical and physical-based approaches' effectiveness to quantify CCC before selecting the best operational algorithm to map CCC from Sentinel-2 for long-term terrestrial ecosystems monitoring across the globe.     

Evaluation of forest fire on Madeira Island using Sentinel-2A MSI imagery

A forest fire started on August 8th, 2016 in several places on Madeira Island causing damage and casualties. As of August 10th the local media had reported the death of three people, over 200 people injured, over 950 habitants evacuated, and 50 houses damaged. This study presents the preliminary results of the assessment of several spectral indices to evaluate the burn severity of Madeira fires during August 2016. These spectral indices were calculated using the new European satellite Sentinel-2A launched in June 2015. The study confirmed the advantages of several spectral indices such as Normalized Difference Vegetation Index (NDVI), Green Normalized Difference Vegetation Index (GNDVI), Normalized Burn Ratio (NBR) and Normalized Difference Vegetation Index (NDVIreXn) using red-edge spectral bands to assess the post-fire conditions. Results showed high correlation between NDVI, GNDVI, NBR and NDVIre1n spectral indices and the analysis performed by Copernicus Emergency Management Service (EMSR175), considered as the reference truth. Regarding the red-edge spectral indices, the NDVIre1n (using band B5, 705 nm) presented better results compared with B6 (740 nm) and B7 (783 nm) bands. These preliminary results allow us to assume that Sentinel-2 will be a valuable tool for post-fire monitoring. In the future, the two twin Sentinel-2 satellites will offer global coverage of the Madeira Archipelago every five days, therefore allowing the simultaneous study of the evolution of the burnt area and reforestation information with high spatial (up to 10 m) and temporal resolution (5 days).     

A novel combined spectral index for estimating the ratio of carotenoid to chlorophyll content to monitor crop physiological and phenological status

Accurate estimation of the ratio of carotenoid (Car) to chlorophyll (Chl) content is crucial to provide valuable insight into diagnoses of plant physiological and phenological status in crop fields. Studies for assessing the ratio of Car to Chl content have been extensively conducted with semi-empirical approaches using spectral indices. However, spectral indices established in previous studies generally relied on site- or species-specific measured data and these indices typically lacked sufficient estimation accuracy for the ratio of Car to Chl content to be used across various species and under different physiological conditions. In this study, we propose a novel combined carotenoid/chlorophyll ratio index (CCRI) in the form of the carotenoid index (CARI) divided by the red-edge chlorophyll index (CI_red-edge): The value of the index is illustrated using synthetic data simulated from the leaf radiative transfer model PROSPECT-5 and with extensive measured datasets at both the leaf and canopy level from the ANGERS dataset and winter wheat and maize field experiments. Results show that CCRI was the index with the highest correlation with the ratio of Car to Chl content in PROSPECT-5 simulations (R² = 0.99, RRMSE = 8.65%) compared to other spectral indices. Calibration and validation results using the ANGERS and winter wheat leaf level data showed that CCRI achieved accurate estimation of the ratio of Car to Chl content (R² = 0.52, RRMSE = 14.10%). CCRI also showed a good performance (R² = 0.54, RRMSE = 17.08%) for estimation of the ratio of Car to Chl content in both calibration and validation with the winter wheat and maize canopy spectra measured in field experiments. Further investigation of the effect of the correlation between leaf Chl and Car content on the performance of CCRI indicated that variation of the correlation affected the retrieval accuracy of CCRI, and CCRI might not be very sensitive to changes of the ratio of Car to Chl content with low values (<0.10).     

Sentinel-2 red-edge spectral indices (RESI) suitability for mapping rubber boom in Luang Namtha Province,northern Lao PDR

Rubber (Hevea brasiliensis) tree cultivation is being continuously expanded northward by replacing evergreen forests and swidden-related regenerated vegetation across the uplands of mainland Southeast Asia (MSEA), e.g., Laos, a landlocked mountainous country. The non-native tree establishment in the northern tropical edge, or the non-traditional suitable planting area, provides stable supplies of natural latex, yet also leads to severe ecological degradation and environmental effects in water conservation, soil quality, rainforest fragmentation and biodiversity. Rubber plantations in the northern part of MSEA are normally characterized by periodic deciduous during the dry season, along with a lengthy defoliation-foliation duration, because of seasonal variations in temperature and precipitation. It thus lays a phenological and physiological base for dynamics monitoring with common multispectral (e.g., near-infrared and short-wave infrared bands) satellites, particularly Landsat. However, whether Sentinel-2 red-edge based algorithms are suitable for discriminating rubber plantations is not yet exclusively reported. Here, we developed a red-edge spectral indices (RESI) method through the normalization of three red-edge bands and applied it to identify and map rubber plantations in Luang Namtha Province of northern Laos, where a rubber boom begun in the mid-2000s. The RESI algorithm highlights the sensitivity of red-edge bands to the changes in moisture content and canopy density of rubber plantations. The area of mature rubber plantations was estimated to be 771.2 km² in this province bordering southwest China in 2018, which was nearly twice as much as that of 2011, with the overall accuracy and kappa coefficient up to 92.50% and 0.91, respectively. Our phenology-based RESI approach not only indicates that Sentinel-2 imagery holds significant potential for monitoring rubber plantations, but also improves the remotely-sensed methods of rubber boom mapping via introducing the red-edge channel.     

Remotely detecting canopy nitrogen concentration and uptake of paddy rice in the Northeast China Plain

The influence of morphophysiological variation at different growth stages on the performance of vegetation indices for estimating plant N status has been confirmed. However, the underlying mechanisms explaining how this variation impacts hyperspectral measures and canopy N status are poorly understood. In this study, four field experiments involving different N rates were conducted to optimize the selection of sensitive bands and evaluate their performance for modeling canopy N status of rice at various growth stages in 2007 and 2008. The results indicate that growth stages negatively affect hyperspectral indices in different ways in modeling leaf N concentration (LNC), plant N concentration (PNC) and plant N uptake (PNU). Published hyperspectral indices showed serious limitations in estimating LNC, PNC and PNU. The newly proposed best 2-band indices significantly improved the accuracy for modeling PNU (R² = 0.75–0.85) by using the lambda by lambda band-optimized algorithm. However, the newly proposed 2-band indices still have limitations in modeling LNC and PNC because the use of only 2-band indices is not fully adequate to provide the maximum N-related information. The optimum multiple narrow band reflectance (OMNBR) models significantly increase the accuracy for estimating the LNC (R² = 0.67–0.71) and PNC (R² = 0.57–0.78) with six bands. Results suggest the combinations of center of red-edge (735 nm) with longer red-edge bands (730–760 nm) are very efficient for estimating PNC after heading, whereas the combinations of blue with green bands are more efficient for modeling PNC across all stages. The center of red-edge (730–735 nm) paired with early NIR bands (775–808 nm) are predominant in estimating PNU before heading, whereas the longer red-edge (750 nm) paired with the center of “NIR shoulder” (840–850 nm) are dominant in estimating PNU after heading and across all stages. The OMNBR models have the advantage of modeling canopy N status for the entire growth period. However, the best 2-band indices are much easier to use. Alternatively, it is also possible to use the best 2-band indices to monitor PNU before heading and PNC after heading. This study systematically explains the influences of N dilution effect on hyperspectral band combinations in relating to the different N variables and further recommends the best band combinations which may provide an insight for developing new hyperspectral vegetation indices.     

利用Sentinel-2影像超分辨率重建的红树林冠层氮含量反演

氮素是植被整个生命周期的必要元素,红树林冠层氮素含量（CNC）遥感估算对红树林健康监测具有重要意义。以广东湛江高桥红树林保护区为研究区,本文旨在基于Sentinel-2影像超分辨率重建技术进行红树林CNC估算和空间制图。研究首先基于三次卷积重采样、Sen2Res和SupReMe算法实现Sentinel-2影像从20 m分辨率到10 m的重建;然后以重建后的影像和原始20 m影像为数据源构建40个相关植被指数,采用递归特征消除法（SVM-RFE）确定CNC估算的最优变量组合,进而构建CNC反演的核岭回归（KRR）模型;最后选取最优模型实现CNC制图。研究结果表明：基于Sen2Res和SupReMe超分辨率算法的重建影像不仅与原始影像具有很高的光谱一致性,且明显提高了影像的清晰度和空间细节。红树林CNC反演波段主要集中在红（B4）、红边（B5）、近红外波段（B8a）以及短波红外波段（B11和B12）,与“红边波段”相关的植被指数（RSSI和TCARIre1/OSAVI）也是红树林CNC反演的有效变量。基于3种方法重建后10 m的影像构建的模型反演精度（R²val>0.579）均优于原始20 m的影像（R²val=0.504）;基于Sen2Res算法重建影像构建的反演模型拟合精度（R²val=0.630,RMSE_val=5.133,RE_val=0.179）与基于三次卷积重采样重建影像的模型拟合精度（R²val=0.640,RMSE_val=5.064,RE_val=0.179）基本相当,前者模型验证精度（R²cv=0.497,RMSE_cv=5.985,RE_cv=0.214）较高且模型变量选择数量最为合理。综合重建影像光谱细节及模型精度,基于Sen2Res算法重建的Sentinel-2影像在红树林CNC估算中具有良好的应用潜力,能为区域尺度红树林冠层健康状况的精细监测提供有效的方法借鉴和数据支撑。     

Assessment of RapidEye vegetation indices for estimation of leaf area index and biomass in corn and soybean crops

Leaf area index (LAI) and biomass are important indicators of crop development and the availability of this information during the growing season can support farmer decision making processes. This study demonstrates the applicability of RapidEye multi-spectral data for estimation of LAI and biomass of two crop types (corn and soybean) with different canopy structure, leaf structure and photosynthetic pathways. The advantages of Rapid Eye in terms of increased temporal resolution (∼daily), high spatial resolution (∼5 m) and enhanced spectral information (includes red-edge band) are explored as an individual sensor and as part of a multi-sensor constellation. Seven vegetation indices based on combinations of reflectance in green, red, red-edge and near infrared bands were derived from RapidEye imagery between 2011 and 2013. LAI and biomass data were collected during the same period for calibration and validation of the relationships between vegetation indices and LAI and dry above-ground biomass. Most indices showed sensitivity to LAI from emergence to 8 m²/m². The normalized difference vegetation index (NDVI), the red-edge NDVI and the green NDVI were insensitive to crop type and had coefficients of variations (CV) ranging between 19 and 27%; and coefficients of determination ranging between 86 and 88%. The NDVI performed best for the estimation of dry leaf biomass (CV = 27% and r² = 090) and was also insensitive to crop type. The red-edge indices did not show any significant improvement in LAI and biomass estimation over traditional multispectral indices. Cumulative vegetation indices showed strong performance for estimation of total dry above-ground biomass, especially for corn (CV ≤ 20%). This study demonstrated that continuous crop LAI monitoring over time and space at the field level can be achieved using a combination of RapidEye, Landsat and SPOT data and sensor-dependant best-fit functions. This approach eliminates/reduces the need for reflectance resampling, VIs inter-calibration and spatial resampling.     

Modelling the spectral response of the desert tree Prosopis tamarugo to water stress

In this paper, we carried out a laboratory experiment to study changes in canopy reflectance of Tamarugo plants under controlled water stress. Tamarugo (Prosopis tamarugo Phil.) is an endemic and endangered tree species adapted to the hyper-arid conditions of the Atacama Desert, Northern Chile. Observed variation in reflectance during the day (due to leaf movements) as well as changes over the experimental period (due to water stress) were successfully modelled by using the Soil-Leaf-Canopy (SLC) radiative transfer model. Empirical canopy reflectance changes were mostly explained by the parameters leaf area index (LAI), leaf inclination distribution function (LIDF) and equivalent water thickness (EWT) as shown by the SLC simulations. Diurnal leaf movements observed in Tamarugo plants (as adaptation to decrease direct solar irradiation at the hottest time of the day) had an important effect on canopy reflectance and were explained by the LIDF parameter. The results suggest that remote sensing based assessment of this desert tree should consider LAI and canopy water content (CWC) as water stress indicators. Consequently, we tested fifteen different vegetation indices and spectral absorption features proposed in literature for detecting changes of LAI and CWC, considering the effect of LIDF variations. A sensitivity analysis was carried out using SLC simulations with a broad range of LAI, LIDF and EWT values. The Water Index was the most sensitive remote sensing feature for estimating CWC for values less than 0.036 g/cm², while the area under the curve for the spectral range 910–1070 nm was most sensitive for values higher than 0.036 g/cm². The red-edge chlorophyll index (CI_red-edge) performed the best for estimating LAI. Diurnal leaf movements had an effect on all remote sensing features tested, particularly on those for detecting changes in CWC.     

Leaf to canopy upscaling approach affects the estimation of canopy traits

In remote sensing applications, leaf traits are often upscaled to canopy level using sunlit leaf samples collected from the upper canopy. The implicit assumption is that the top of canopy foliage material dominates canopy reflectance and the variability in leaf traits across the canopy is very small. However, the effect of different approaches of upscaling leaf traits to canopy level on model performance and estimation accuracy remains poorly understood. This is especially important in short or sparse canopies where foliage material from the lower canopy potentially contributes to the canopy reflectance. The principal aim of this study is to examine the effect of different approaches when upscaling leaf traits to canopy level on model performance and estimation accuracy using spectral measurements (in-situ canopy hyperspectral and simulated Sentinel-2 data) in short woody vegetation. To achieve this, we measured foliar nitrogen (N), leaf mass per area (LMA), foliar chlorophyll and carbon together with leaf area index (LAI) at three vertical canopy layers (lower, middle and upper) along the plant stem in a controlled laboratory environment. We then upscaled the leaf traits to canopy level by multiplying leaf traits by LAI based on different combinations of the three canopy layers. Concurrently, in-situ canopy reflectance was measured using an ASD FieldSpec-3 Pro FR spectrometer, and the canopy traits were related to in-situ spectral measurements using partial least square regression (PLSR). The PLSR models were cross-validated based on repeated k-fold, and the normalized root mean square errors (nRMSE_cv) obtained from each upscaling approach were compared using one-way analysis of variance (ANOVA) followed by Tukey’s post hoc test. Results of the study showed that leaf-to-canopy upscaling approaches that consider the contribution of leaf traits from the exposed upper canopy layer together with the shaded middle canopy layer yield significantly (p < 0.05) lower error (nRMSE_cv < 0.2 for canopy N, LMA and carbon) as well as high explained variance (R² > 0.71) for both in-situ hyperspectral and simulated Sentinel-2 data. The widely-used upscaling approach that considers only leaf traits from the upper illuminated canopy layer yielded a relatively high error (nRMSE_cv>0.2) and lower explained variance (R² < 0.71) for canopy N, LMA and carbon. In contrast, canopy chlorophyll upscaled based on leaf samples collected from the upper canopy and total canopy LAI exhibited a more accurate relationship with spectral measurements compared with other upscaling approaches. Results of this study demonstrate that leaf to canopy upscaling approaches have a profound effect on canopy traits estimation for both in-situ hyperspectral measurements and simulated Sentinel-2 data in short woody vegetation. These findings have implications for field sampling protocols of leaf traits measurement as well as upscaling leaf traits to canopy level especially in short and less foliated vegetation where leaves from the lower canopy contribute to the canopy reflectance.     

Visualizing the ill-posedness of the inversion of a canopy radiative transfer model: A case study for Sentinel-2

Monitoring biophysical and biochemical vegetation variables in space and time is key to understand the earth system. Operational approaches using remote sensing imagery rely on the inversion of radiative transfer models, which describe the interactions between light and vegetation canopies. The inversion required to estimate vegetation variables is, however, an ill-posed problem because of variable compensation effects that can cause different combinations of soil and canopy variables to yield extremely similar spectral responses. In this contribution, we present a novel approach to visualise the ill-posed problem using self-organizing maps (SOM), which are a type of unsupervised neural network. The approach is demonstrated with simulations for Sentinel-2 data (13 bands) made with the Soil-Leaf-Canopy (SLC) radiative transfer model. A look-up table of 100,000 entries was built by randomly sampling 14 SLC model input variables between their minimum and maximum allowed values while using both a dark and a bright soil. The Sentinel-2 spectral simulations were used to train a SOM of 200 × 125 neurons. The training projected similar spectral signatures onto either the same, or contiguous, neuron(s). Tracing back the inputs that generated each spectral signature, we created a 200 × 125 map for each of the SLC variables. The lack of spatial patterns and the variability in these maps indicate ill-posed situations, where similar spectral signatures correspond to different canopy variables. For Sentinel-2, our results showed that leaf area index, crown cover and leaf chlorophyll, water and brown pigment content are less confused in the inversion than variables with noisier maps like fraction of brown canopy area, leaf dry matter content and the PROSPECT mesophyll parameter. This study supports both educational and on-going research activities on inversion algorithms and might be useful to evaluate the uncertainties of retrieved canopy biophysical and biochemical state variables.     

光谱指数用于叶绿素含量提取的评价及一种改进的农作物冠层叶绿素含量提取模型

对目前提出的光谱指数用以提取叶片叶绿素含量的适应性进行了分析和评价。通过分析,解释了为什么研究者得出这些指数与他们的观测样本叶绿素含量有显著的相关的结论以及为什么某个研究者提出的某个指数和叶绿素含量间的关系用于其他样本时会失效。此外,改进了一个农作物冠层叶绿素含量的提取模型,通过独立实测数据验证,效果较好,认为是可以用于其他地区农作物叶绿素含量提取的模型。     

High-resolution mapping of forest canopy height using machine learning by coupling ICESat-2 LiDAR with Sentinel-1, Sentinel-2 and Landsat-8 data

Forest canopy height is an important indicator of forest carbon storage, productivity, and biodiversity. The present study showed the first attempt to develop a machine-learning workflow to map the spatial pattern of the forest canopy height in a mountainous region in the northeast China by coupling the recently available canopy height (H_canopy) footprint product from ICESat-2 with the Sentinel-1 and Sentinel-2 satellite data. The ICESat-2 H_canopy was initially validated by the high-resolution canopy height from airborne LiDAR data at different spatial scales. Performance comparisons were conducted between two machine-learning models – deep learning (DL) model and random forest (RF) model, and between the Sentinel and Landsat-8 satellites. Results showed that the ICESat-2 H_canopy showed the highest correlation with the airborne LiDAR canopy height at a spatial scale of 250 m with a Pearson’s correlation coefficient (R) of 0.82 and a mean bias of -1.46 m, providing important evidence on the reliability of the ICESat-2 vegetation height product from the case in China’s forest. Both DL and RF models obtained satisfactory accuracy on the upscaling of ICESat-2 H_canopy assisted by Sentinel satellite co-variables with an R-value between the observed and predicted H_canopy equalling 0.78 and 0.68, respectively. Compared to Sentinel satellites, Landsat-8 showed relatively weaker performance in H_canopy prediction, suggesting that the addition of the backscattering coefficients from Sentinel-1 and the red-edge related variables from Sentinel-2 could positively contribute to the prediction of forest canopy height. To our knowledge, few studies have demonstrated large-scale vegetation height mapping in a resolution ≤ 250 m based on the newly available satellites (ICESat-2, Sentinel-1 and Sentinel-2) and DL regression model, particularly in the forest areas in China. Thus, the present work provided a timely and important supplementary to the applications of these new earth observation tools.     

Landsat-8 vs. Sentinel-2: examining the added value of sentinel-2’s red-edge bands to land-use and land-cover mapping in Burkina Faso

The availability of freely available moderate-to-high spatial resolution (10–30 m) satellite imagery received a major boost with the recent launch of the Sentinel-2 sensor by the European Space Agency. Together with Landsat, these sensors provide the scientific community with a wide range of spatial, spectral, and temporal properties. This study compared and explored the synergistic use of Landsat-8 and Sentinel-2 data in mapping land use and land cover (LULC) in rural Burkina Faso. Specifically, contribution of the red-edge bands of Sentinel-2 in improving LULC mapping was examined. Three machine-learning algorithms – random forest, stochastic gradient boosting, and support vector machines – were employed to classify different data configurations. Classification of all Sentinel-2 bands as well as Sentinel-2 bands common to Landsat-8 produced an overall accuracy, that is 5% and 4% better than Landsat-8. The combination of Landsat-8 and Sentinel-2 red-edge bands resulted in a 4% accuracy improvement over that of Landsat-8. It was found that classification of the Sentinel-2 red-edge bands alone produced better and comparable results to Landsat-8 and the other Sentinel-2 bands, respectively. Results of this study demonstrate the added value of the Sentinel-2 red-edge bands and encourage multi-sensoral approaches to LULC mapping in West Africa.     

An investigation into robust spectral indices for leaf chlorophyll estimation

Quantifying photosynthetic activity at the regional scale can provide important information to resource managers, planners and global ecosystem modelling efforts. With increasing availability of both hyperspectral and narrow band multispectral remote sensing data, new users are faced with a plethora of options when choosing an optical index to relate to their chosen or canopy parameter. The literature base regarding optical indices (particularly chlorophyll indices) is wide ranging and extensive, however it is without much consensus regarding robust indices. The wider spectral community could benefit from studies that apply a variety of published indices to differing sets of species data. The consistency and robustness of 73 published chlorophyll spectral indices have been assessed, using leaf level hyperspectral data collected from three crop species and a variety of savanna tree species. Linear regression between total leaf chlorophyll content and bootstrapping were used to determine the leafpredictive capabilities of the various indices. The indices were then ranked based on the prediction error (the average root mean square error (RMSE)) derived from the bootstrapping process involving 1000 iterative resampling with replacement. The results show two red-edge derivative based indices (red-edge position via linear extrapolation index and the modified red-edge inflection point index) as the most consistent and robust, and that the majority of the top performing indices (in spite of species variability) were simple ratio or normalised difference indices that are based on off-chlorophyll absorption centre wavebands (690–730 nm).     

Predicting grain protein content of winter wheat using remote sensing data based on nitrogen status and water stress

Advanced site-specific knowledge of grain protein content of winter wheat from remote sensing data would provide opportunities to manage grain harvest differently, and to maximize output by adjusting input in fields. In this study, remote sensing data were utilized to predict grain protein content. Firstly, the leaf nitrogen content at winter wheat anthesis stage was proved to be significantly correlated with grain protein content (R² = 0.36), and spectral indices significantly correlated to leaf nitrogen content at anthesis stage were potential indicators for grain protein content. The vegetation index, VI_green, derived from the canopy spectral reflectance at green and red bands, was significantly correlated to the leaf nitrogen content at anthesis stage, and also highly significantly correlated to the final grain protein content (R² = 0.46). Secondly, the external conditions, such as irrigation, fertilization and temperature, had important influence on grain quality. Water stress at grain filling stage can increase grain protein content, and leaf water content is closely related to irrigation levels, therefore, the spectral indices correlated to leaf water content can be potential indicators for grain protein content. The spectral reflectance of TM channel 5 derived from canopy spectra or image data at grain filling stage was all significantly correlated to grain protein content (R² = 0.31 and 0.37, respectively). Finally, not only this study proved the feasibility of using remote sensing data to predict grain protein content, but it also provided a tentative prediction of the grain protein content in Beijing area using the reflectance image of TM channel 5.