Numerical experiment on <Emphasis Type="Italic">Kyucho</Emphasis> around the Tango Peninsula induced by Typhoon 0406

A numerical experiment using a three dimensional level model was performed to clarify the mechanism generating a strong coastal current, Kyucho, induced by the passage of Typhoon 0406 around the tip of the Tango Peninsula, Japan in June 2004. Wind stress accompanied by Typhoon 0406 was applied to the model ocean with realistic bottom topography and stratification condition. The model well reproduced the characteristics of Kyucho observed by Kumaki et al. (2005), i.e., the strong alongshore current with maximum velocity of 53 cm s⁻¹ and its propagation along the peninsula with propagation speed of about 0.6 m s⁻¹ one half-day after the typhoon’s passage. Coastal-trapped waves (CTW) accompanied by downwelling were induced along the northwest coast of the peninsula by the alongshore wind stress. The energy density flux due to the CTW flowed eastward along the coast, and indicated scattering of the CTW around the eastern coast of the peninsula. In addition, significant near-inertial internal gravity waves were also caused in the offshore region from the west of the Noto Peninsula to the north of the Tango Peninsula by the typhoon’s passage. The energy flux density of the near-inertial fluctuations flowed southward off the Fukui coast, and part of the energy flux was trapped on the tip of the Tango Peninsula, flowing with the coast on its right. It was found that the strong current, Kyucho, at the northeastern tip of the Tango Peninsula was generated by superposition of the near-inertial internal gravity waves and subinertial CTW.     

Characterization of proteins in the muscle of<Emphasis Type="Italic">limanda yokohamae</Emphasis> from the masan bay,Korea

Increasing industrial development in the Masan Bay area of Korea over the past decades increased the risk for the survival of marine organisms in the bay area by the deterioration of the water quality. Since living organisms have the ability to adapt contamination-associated stimuli by the alteration of gene expression, changes in proteins can be used as an important criterion for assessing the levels of environmental conditions. In this study, therefore, alterations of the expression of proteins in the muscle ofLimanda yokohamae from Dukdong and Dotsum in the bay area were surveyed and characterized as compared with Haegumgang, which served as a control site. The results demonstrated that the twenty spots detected from Dukdong and Dotsum were similar to each other. Fifteen proteins were found to be predicted or undefined proteins, while five proteins were identified as heavy polypeptide 11 of myosin, apolipoprotein A-I, fibroblast growth factor 17b precursor, G protein-coupled receptor kinase 1 b and bonnie and clyde. These data suggest that local fish in the bay area have dysfunction in muscle physiology including contraction, lipid metabolism, proliferation and differentiation and nervous system.     

Excretion and respiration rates of the scyphomedusa <Emphasis Type="Italic">Aurelia aurita</Emphasis> from the Inland Sea of Japan

We measured the ammonium excretion, phosphate excretion and respiration rates of the scyphomedusa Aurelia aurita from Ondo Strait, in the central part of the Inland Sea of Japan, at 28 and 20°C. The rates measured at 28°C were converted to those at 20°C using the Q₁₀ values, i.e. 1.56, 1.57 and 2.80, for ammonium excretion, phosphate excretion and respiration rates, respectively. The composite relationships between metabolic rates and wet weight of a medusa (WW, g, range 11–1330 g) at 20°C were expressed by the following allometric equations. For ammonium excretion rate (N, μmoles N medusa⁻¹d⁻¹): N = 0.497WW ^1.09, phosphate excretion rate (P, μmoles P medusa⁻¹d⁻¹): P = 0.453WW ^0.84, and respiration rate (R, μmoles O₂ medusa⁻¹d⁻¹): R = 96.9WW ^1.06. Mean O:N ratios (i.e. atomic ratios of 16.9 and 11.0 at 28 and 20°C, respectively) indicated that the metabolism of A. aurita medusae was protein-dominated. These metabolic parameters enabled us to estimate the nitrogen and phosphorus regeneration rates of an A. aurita medusa population typical of early summer in the Ondo Strait (means of water temperature, medusa individual weight and population biomass: 20°C, 200 g WW and 50.8 g WW m⁻³, respectively). Regenerated nitrogen and phosphorus were equivalent to 10.0 and 21.6% of phytoplankton uptake rates, respectively, nearly twice that estimated for mesozooplankton, demonstrating that A. aurita medusae are key components of the plankton community, influencing the trophic and nutrient dynamics in the Ondo Strait during early summer.     

The transition zone chlorophyll front can trigger <Emphasis Type="Italic">Acanthaster planci</Emphasis> outbreaks in the Pacific Ocean: Historical confirmation

We hypothesize that the North Pacific transition zone chlorophyll front (TZCF) can episodically deliver enhanced phytoplankton levels that are linked to the emergence of adult populations of the coral eating starfish Acanthaster planci. In some years, the seasonally migrating TZCF bathes the northwest Hawaiian Islands with chlorophyll-a rich waters during the winter months that coincide with peak starfish spawning and provide ideal conditions for A. planci larval survival. We found significant relationships between starfish populations in the North Pacific and the southernmost latitude of the TZCF, chlorophyll-a concentrations, sea surface temperature, and Ekman transport indices since 1967. We propose that TZCF-triggered primary outbreaks are followed by secondary outbreaks throughout the region, in accordance with the surface currents and separated by a sequential time lag. Our historical confirmation suggests outbreaks are predictable, which has immediate coral reef conservation and management consequences.     

Reproductive ecology of the dominant dinoflagellate, <Emphasis Type="Italic">Ceratium fusus</Emphasis>, in coastal area of Sagami Bay,Japan

The seasonal abundance of the dominant dinoflagellate, Ceratium fusus, was investigated from January 2000 to December 2003 in a coastal region of Sagami Bay, Japan. The growth of this species was also examined under laboratory conditions. In Sagami Bay, C. fusus increased significantly from April to September, and decreased from November to February, though it was found at all times through out the observation period. C. fusus increased markedly in September 2001 and August 2003 after heavy rainfalls that produced pycnoclines. Rapid growth was observed over a salinity range of 24 to 30, with the highest specific rate of 0.59 d⁻¹ measured under the following conditions: salinity 27, temperature 24°C, photon irradiance 600 μmol m⁻²s⁻¹. The growth rate of C. fusus increased with increasing irradiance from 58 to 216 μmol m⁻²s⁻¹, plateauing between 216 and 796 μmol m⁻²s⁻¹ under all temperature and salinity treatments (except at a temperature of 12°C). Both field and laboratory experiments indicated that C. fusus has the ability to grow under wide ranges of water temperatures (14–28°C), salinities (20–34), and photon irradiance (50–800 μmol m⁻²s⁻¹); it is also able to grow at low nutrient concentrations. This physiological flexibility ensures that populations persist when bloom conditions come to an end.     

Turbulent structure of the subsurface layer of the sea according to the data of the <Emphasis Type="Italic">Sigma-1</Emphasis> measuring complex

We present the results of experimental investigations of the characteristics of turbulence in the layer of wave-induced mixing. The data on the fluctuations of velocity, temperature, and conductivity are obtained with the help of a Sigma-1 measuring complex. The computed values of the dissipation rate of turbulent energy are compared with different models proposed for the subsurface layer. It is shown that the available models fail to guarantee satisfactory agreement of the numerical results with the experimental data for the layer of active wave action and, in particular, in the presence of swell. This leads us to the conclusion concerning the necessity of parametrization and assimilation of more complete data on the state of the sea surface, the structure of currents, and the surface layer of the atmosphere in the models. __________ Translated from Morskoi Gidrofizicheskii Zhurnal, No. 2, pp. 15–28, March–April, 2007.     

Measuring chlorophyll <Emphasis Type="Italic">a</Emphasis> concentrations in the Sea of Japan using probe and flow fluorimeters

The spatial variability of chlorophyll a concentrations was studied from the data of two near-shore expeditions and the cruise of the R/V Akademik M.A. Lavrent’ev in October–November 2010 over the northwestern part of the Sea of Japan. The sections across eddies showed a maximum of chlorophyll a at a depth of 40 m. According to the data from the cruise, the chlorophyll a concentration was maximum in the north of the sea and decreased to the south. In parallel, the procedures for chlorophyll a determination were compared for spectrophotometry with a fluorescence probe and a fluorescence flow system. The probe data of chlorophyll a fluorescence showed a high correlation with the chlorophyll a concentrations by spectrophotometry. On the contrary, data on chlorophyll a concentrations from spectrophotometry did not agree with those from the flow system. It was shown that a fluorimeter in the flow system recorded dissolved organic matter along with the chlorophyll a fluorescence.     

Field Study of the Space Uniformity of Meteorological and Wave Parameters in the Coastal Zone. On the Problem of Calibration of a Side-Looking Radar on the <Emphasis Type="Italic">Sich-1M</Emphasis> Satellite as an Instrument for Measuring Wind Velocity over the Sea

We study the problem of subsatellite calibration of a side-looking radar (SLR) of the Sich-1M satellite regarded as an instrument for the evaluation of the velocity of surface wind and discuss the possibility of application of the meteorological and wave parameters measured from the stationary oceanographic platform of the Experimental Department of the Marine Hydrophysical Institute (Ukrainian Academy of Sciences) for their evaluation in the remote regions of the sea. These regions can be observed with the help of the SLR without errors introduced by the appearance of the coast in elements of space resolution. To prove the indicated possibility experimentally, we perform simultaneous measurements of the water and air temperatures, wind velocity, and the characteristics of waves both from the platform and in the water area neighboring with the platform on the side of the sea at distances of up to 4.8 km. The quantitative estimates of the degree of space uniformity of the analyzed parameters are deduced under the conditions of stable inshore wind. A conclusion is made that the platform can be used for subsatellite measurements aimed at the validation and improvement of the algorithm of reconstruction of the velocity of surface wind by using the SLR of the Sich-1M satellite. __________ Translated from Morskoi Gidrofizicheskii Zhurnal, No. 3, pp. 31–43, May–June, 2005.     

<Emphasis Type="Italic">Cochlodinium polykrikoides</Emphasis> red tide detection in the South Sea of Korea using spectral classification of MODIS data

To distinguish true red tide water (particularly Cochlodinium polykrikoides blooms) from non-red tide water (false satellite high chlorophyll water) in the South Sea of Korea, we developed a systematic classification method using spectral information from MODIS level products and applied it to five different harmful algal bloom events. Red tide and nonred tide waters were classified based on four different criteria. The first step revealed that the radiance peaks of potential red tide water occurred at 555 and 678 nm. The second step separated optically different waters that were influenced by relatively low and high contributions of colored dissolved organic matter (CDOM) (including detritus) to chlorophyll. The third and fourth steps discriminated red tide water from non-red tide water based on the blue-to-green ratio in areas with lower and higher contributions of CDOM to chlorophyll, respectively. After applying the red tide classification (using the four criteria), the spectral response of the red tide water, which is influenced by pigment concentration, showed different slopes for the blue and green bands (lower slope at blue bands and higher slope at green bands). The opposite result was found for non-red tide water, due to decreasing phytoplankton absorption and increasing detritus/CDOM absorption at blue bands. The results were well matched with the discoloration of water (blue to dark red/brown) and delineated the areal coverage of C. polykrikoides blooms, revealing the nature of spatial and temporal variations in red tides. This simple spectral classification method led to increase user accuracy for C. polykrikoides and non-red tide blooms (>46% and >97%) and provided a more reliable and robust identification of red tides over a wide range of oceanic environments than was possible using chlorophyll a concentration, chlorophyll anomaly, fluorescence analysis, or proposed red tide detection algorithms.     

Dietary shift and feeding intensity of <Emphasis Type="Italic">Stenobrachius leucopsarus</Emphasis> in the Bering Sea

The food habits of the dominant myctophid Stenobrachius leucopsarus were examined in the central basin of the Bering Sea in relation to oceanographic conditions, in summer 2002 and 2003 and spring 2006. S. leucopsarus exhibited an ontogenetic and seasonal dietary shift. In spring, small fish (≤40 mm) preyed mainly on Neocalanus flemingeri/plumchrus whereas large fish fed mainly on Neocalanus cristatus. In summer, small fish preyed mainly on Metridia pacifica whereas large fish fed mainly on euphausiids (Thysanoessa spp.). In the summer of 2003, when water temperature in the epipelagic layer (≤100 m) was warmer, reflecting the prevalence of the Alaskan Stream, small-sized S. leucopsarus showed a higher stomach content index, perhaps reflecting the greater abundance of M. pacifica. Thus, the present study shows that the physical variability in the epipelagic layer affects not only diets but also feeding performance of micronekton.     

Detection of nitrogenase in individual cells of a natural population of <Emphasis Type="Italic">trichodesmium</Emphasis> using immunocytochemical methods for fluorescent cells

The intercellular distribution of nitrogenase was detected in a natural population of Trichodesmium spp. collected from Shitaba Bay, Uwajima, Ehime Prefecture, Japan. Polyclonal antibodies raised against the Fe-protein and the MoFe-protein (α-subunit) of nitrogenase were used as probes. Visualization of the antibody binding to the nitrogenase was performed using horseradish peroxidase-conjugated secondary antibody and the chromogenic substrate, 3,3′-diaminobenzidine tetrahydrochloride, to avoid the masking effects caused by the bright autofluorescence emitted by the Trichodesmium cells. Nitrogenase proteins were detected in 66 to 81% of the trichomes. More than 77% of the cells were immunostained in individual nitrogenase-containing trichome. The data show natural populations of Trichodesmium spp. do not developed heterocyst-equivalent cells.     

Estimation of the <Emphasis Type="Italic">in situ</Emphasis> Ultraviolet-A absorption of seawater by a simple irradiance inversion model

An irradiance inversion model to estimate the in situ absorption coefficient of seawater has been developed for the Ultraviolet-A (UVA) wavelength domain. Input parameters are sun angle and the up-and downward planar irradiances measured for at least two depths. The present method does not require seawater to be sampled, and is a discrete wavelength method which returns the absorption coefficient at a given wavelength from the irradiances measured at that wavelength without assuming a spectral shape of any optical properties a priori. Comparison between the model results and spectrophotometric measurements shows that the model is practically useful when cloud cover in the atmosphere is ≤ 50%. According to the present method, measurements of the irradiances enable simultaneous observation of the in situ underwater UVA radiation level and the absorption capacity of bulk seawater using a radiometer.     

Quality of the Seagrass <Emphasis Type="Italic">Halophila ovalis</Emphasis> on a Thai Intertidal Flat as Food for the Dugong

To determine whether dugongs along the Thai coast prefer relatively faster-growing Halophila ovalis due to its nutritional value, we analyzed the contents of carbon (C), nitrogen (N), phosphorus (P), ash, fiber, and lipids in several species of seagrass collected near dugong feeding trails. CNP concentrations in the faster-growing H. ovalis were distinctly lower than those in the slower-growing species. Lipid concentrations were comparatively not as low; they were equivalent to the values of the slower-growing Enhalus acoroides in the leaves and to Thalassia hemprichii and Cymodocea rotundata in the rhizomes and roots. The ash content of H. ovalis was the highest of all species in both the above and below ground parts. The reason that dugong feeds exclusively on H. ovalis at this site may be the potentially large supply due to its high growth rate, rather than its nutritive qualities.     

Study of the Kuroshio/Ryukyu Current system based on satellite-altimeter and <Emphasis Type="Italic">in situ</Emphasis> measurements

Data from satellite altimeters and from a 13-month deployment of in situ instruments are used to determine an empirical relationship between sea-level anomaly difference (SLA) across the Kuroshio in the East China Sea (ECS-Kuroshio) and net transport near 28°N. Applying this relationship to the altimeter data, we obtain a 12-year time series of ECS-Kuroshio transport crossing the C-line (KT). The resulting mean transport is 18.7 ± 0.2 Sv with 1.8 Sv standard deviation. This KT is compared with a similarly-determined time series of net Ryukyu Current transport crossing the O-line near 26°N southeast of Okinawa (RT). Their mean sum (24 Sv) is less than the mean predicted Sverdrup transport. These KT and RT mean-flow estimates form a consistent pattern with historical estimates of other mean flows in the East China Sea/Philippine Basin region. While mean KT is larger than mean RT by a factor of 3.5, the amplitude of the KT annual cycle is only half that of RT. At the 95% confidence level the transports are coherent at periods of about 2 years and 100–200 days, with RT leading KT by about 60 days in each case. At the annual period, the transports are coherent at the 90% confidence level with KT leading RT by 4–5 months. While the bulk of the Kuroshio enters the ECS through the channel between Taiwan and Yonaguni-jima, analysis of satellite altimetry maps, together with the transport time series, indicates that the effect of mesoscale eddies is transmitted to the ECS via the Kerama Gap southwest of Okinawa. Once the effect of these eddies is felt by the ECS-Kuroshio at 28°N, it is advected rapidly to the Tokara Strait.     

Effect of Ocean Climate Changes on the Korean Stock of Pacific Saury, <Emphasis Type="Italic">Cololabis saira</Emphasis> (BREVOORT)

Atmospheric, hydrographic and fishery biological factors indicated that the abnormal northward shift in the distribution of Pacific saury might be the result of a strong flux of warm water into the Japan/East Sea in the late 1970s. Recruitment failure of saury in the late 1970s was attributed to the limitation of the productive area for primary production caused by oligotrophic warm water, and to mismatch of the time of the spring outburst with the earlier arrival of saury to the feeding ground. Comparison of monthly upper mixed layer depth (MLD) and critical depth supported the possibility of the mismatch phenomenon. However, an appropriate management scheme should be implemented to prevent recruitment overfishing for the stock when any sign of ocean climate changes is detected.     

Standardizing CPUE of yellowfin tuna (<Emphasis Type="Italic">Thunnus albacares</Emphasis>) longline fishery in the tropical waters of the northwestern Indian Ocean using a deterministic habitat-based model

Data collected from a longline fishery in the Indian Ocean were used to evaluate the performance of a deterministic habitat-based standardization (detHBS) method for catch per unit effort (CPUE) standardization. The habitat preference indices of the yellowfin tuna (Thunnus albacares) were estimated for different depth, temperature, and dissolved oxygen (DO) classes. The detHBS was applied for standardizing the yellowfin tuna CPUE based on the habitat preference indices of the yellowfin tuna. Nominal CPUE and normalized nominal CPUE were compared with the standardized CPUE and normalized standardized CPUE, respectively, using Wilcoxon tests. The results showed that (1) there was significant difference between nominal CPUE and standardized CPUEs (p < 0.01); (2) there was no significant difference between normalized nominal CPUE and normalized standardized CPUEs estimated using the data set of depth, temperature, and DO (p > 0.01). This study suggests that detHBS effectively improved the precision of CPUE standardization, and the depth data set was the optimum data set in standardizing CPUE.