Beta diversity of tropical marine benthic assemblages in the Spermonde Archipelago, Indonesia

In order to preserve diversity it is essential to understand how assemblages change across space. Despite this fact, we still know very little about how marine diversity is spatially distributed, especially among lesser‐studied invertebrate taxa. In the present study beta‐diversity patterns of sea urchins, sponges, mushroom corals and larger foraminifera were assessed in the Spermonde Archipelago (Indonesia). Using ordinations we showed that the inshore zone (<5 km offshore), midshore zone (5 < x < 30 km offshore) and distance offshore zone (>30 km offshore) all contained distinct assemblages of sponges and corals, while only foraminifera assemblages from the inshore (<5 km offshore) zone were distinct. There was a significant spatial pattern of community similarity for all taxa surveyed, but this pattern proved to be wholly related to environmental variables for sponges and foraminifera, and primarily for mushroom corals and sea urchins. The lack of a pure spatial component suggests that these taxa may not be dispersal limited within the spatial scales of this study (c. 1600 km²). The analyses of the corals and foraminifera were additionally tested at two spatial scales of sampling. Both taxa were primarily associated with local‐scale environmental variables at the local scale and larger‐scale variables at the larger scale. Mean inter‐plot similarity was also higher and variation lower at the larger scale. The results suggest that substantial variation in similarity can be predicted using simple locally assessed environmental variables combined with remotely sensed parameters.     

Benthic foraminifera of the Holocene transgressive west-central Florida inner shelf: paleoenvironmental implications

The sedimentology, stratigraphic position, and benthic foraminiferal biostratigraphy of early- to mid-Holocene deposits from the west-central Florida shelf suggest that barrier islands developed along this coast as early as 8.3 ka, in an environment that was more arid than today. Predominant foraminifera of three paralic sedimentary facies deposited between 5.3 and 8.3 ka include miliolids, Elphidium spp., and Ammonia spp., all of which are common in back-barrier environments. Foraminiferal assemblages also suggest that early back-barrier sediments were deposited in a hypersaline environment, similar to that of the arid Laguna Madre of the western Gulf of Mexico. Modern back-barrier foraminifera in the Tampa Bay region are indicative of the humid subtropical climate of today. Thus, the climate of west-central Florida at approximately 8 ka was more arid than today, which is consistent with recent studies showing that climate in the Gulf of Mexico was dryer and cooler during this time period.     

Live benthic foraminiferal faunas off Cape Blanc, NW-Africa: Community structure and microhabitats

Live (Rose-Vengal stained) benthic foraminifera were studied along a transect across the main area of organic matter deposition in the Cape Blanc upwelling region. The faunal analyses suggest that at the shallowest station (1200 m) the benthic ecosystem is permanently influenced by the upwelling, whereas at the deepest stations (3010 and 2530 m depth) the ocean bottom is subject to significant organic influxes only in summer. The vertical zonation of foraminiferal species in the sediment shows a close correspondence with the depth distribution of oxic respiration, nitrate and sulphate reduction. It is suggested that this linkage is caused by the presence of various stocks of anaerobic and sulphate- and nitrate-reducing bacteria. Deep infaunal foraminiferal species are thought to feed selectively, either on the bacterial stocks or on nutritious particles produced by bacterial degradation of more refractory organic matter. As such, foraminiferal microhabitats are only indirectly controlled by pore water oxygen concentrations.     

The coral communities of the Islas Marias archipelago,Mexico: structure and biogeographic relevance to the Eastern Pacific

Various authors have suggested that the Islas Marias archipelago, Mexico, may play a significant biogeographic role in the dispersal of Indo Pacific coral species into the Eastern Pacific; however, the coral communities of this archipelago have received scarce attention to date. Here, we first addressed coral community structure across the islands and, by employing ordination analysis, minimum spanning tree and particle‐tracking experiments, used this information to evaluate the relevance of the archipelago for coral dispersal. Twenty‐four coral communities were recorded in the archipelago. Coral cover varied significantly among islands: Maria Cleofas had large values (38.5%), intermediate values were observed for Maria Madre (26.5%) and Maria Magdalena (22.84%), and relatively low values were recorded for San Juanito (18.5%). Coral communities mainly consisted of Pocillopora (57.3%) and Porites (25.5%) species, while species of Pavona (16%) and Psammocora (0.6%) made relatively minor contributions. Thirteen stony coral species were identified in the archipelago; of these Psammocora profundacella and Pavona duerdeni represent new records. Ordination analysis, minimum spanning tree and particle‐tracking experiments suggested similar connecting paths in the studied area; in general, the Islas Marias stands as a route for coral dispersal of Indo Pacific species into the Northeastern Pacific. In a regional context, the Islas Marias has three major biogeographic implications to coral dispersal: (i) the archipelago stands as a major stepping stone for the transport of species and individuals among the Revillagigedo archipelago, the Gulf of California and the tropical Mexican Pacific; (ii) the Islas Marias may play a seminal role in maintaining the genetic connectivity between southern and northern coral populations along the Mexican Pacific and (iii) because of its relatively pristine status and low levels of human impact, the archipelago may potentially serve as a source of coral propagules for ecosystem recovery in the Gulf of California and along the Pacific coast of the Mexican mainland following natural and/or human induced perturbations.     

Effects of irradiance on benthic and water column processes in a Gulf of Mexico estuary: Pensacola Bay, Florida, USA

We examined the effect of light on water column and benthic fluxes in the Pensacola Bay estuary, a river-dominated system in the northeastern Gulf of Mexico. Measurements were made during the summers of 2003 and 2004 on 16 dates distributed along depth and salinity gradients. Dissolved oxygen fluxes were measured on replicate sediment and water column samples exposed to a gradient of photosynthetically active radiation. Sediment inorganic nutrient (NH₄⁺, NO₃⁻, PO₄³⁻) fluxes were measured. The response of dissolved oxygen fluxes to variation in light was fit to a photosynthesis–irradiance model and the parameter estimates were used to calculate daily integrated production in the water column and the benthos. The results suggest that shoal environments supported substantial benthic productivity, averaging 13.6 ± 4.7 mmol O₂ m⁻² d⁻¹, whereas channel environments supported low benthic productivity, averaging 0.5 ± 0.3 mmol O₂ m⁻² d⁻¹ (±SE). Estimates of baywide microphytobenthic productivity ranged from 8.1 to 16.5 mmol O₂ m⁻² d⁻¹, comprising about 16–32% of total system productivity. Benthic and water column dark respiration averaged 15.2 ± 3.2 and 33.6 ± 3.7 mmol O₂ m⁻² d⁻¹, respectively Inorganic nutrient fluxes were generally low compared to relevant estuarine literature values, and responded minimally to light exposure. Across all stations, nutrient fluxes from sediments to the water column averaged 1.11 ± 0.98 mmol m⁻² d⁻¹ for NH₄⁺, 0.58 ± 1.08 mmol m⁻² d⁻¹ for NO₃⁻, 0.01 ± 0.09 mmol m⁻² d⁻¹ for PO₄³⁻. The results of this study illustrate how light reaching the sediments is an important modulator of benthic nutrient and oxygen dynamics in shallow estuarine systems.     

High resolution characterization of northwest Mediterranean coastal waters thermal regimes: To better understand responses of benthic communities to climate change

In the North West Mediterranean (NWM), mass mortality events (MME) of long-lived benthic species that have occurred over the last two decades have been related to regional warming trend. Gaining robust data sets on thermal regimes is critical to assess conditions to which species have adapted, detect extreme events and critically evaluate biological impacts. High resolution temperature (T) time series obtained during 1999–2006 from 5 to 40 m depth at four contrasted sites of the NWM were analyzed: Area Marina Protegida de les Illes Medes (NE Spain), Riou (Marseilles, France), Parc National de Port-Cros (France), and Réserve Naturelle de Scandola (Corsica, France). The seasonal pattern showed winter T around 11–13 °C, and summer T mainly around 22–24 °C near surface to 18–20 °C at depth. Stratification dynamics showed recurrent downwellings (>40 m) at Medes, frequent observation (1/3rd of the summer) of deep and cold upwelled waters at Riou, while Scandola exhibited stable summer stratification and highest suprathermoclinal T. Port-Cros showed an intermediate regime that oscillated between Riou and Scandola depending on the occurrence of northern winds. Data distribution study permitted to identify and to characterize 3 large scale positive anomalies concomitant with the mass mortality outbreaks of summers 1999, 2003 and 2006. The analysis of biological surveys on gorgonian populations showed significant impacts during the 3 years with temperature anomalies. Besides the degree of impact showed inter-annual differences which could be related to different T conditions concomitant to mortality events, from slight increase in T extreme of only 1–2 °C over short duration, to lengthened more classical summer conditions. Our results therefore support the hypothesis that shallow NWM populations of long-lived benthic species are living near their upper thermal thresholds. Given actual trends and projections in NWM, the repetition of new MMEs in the next decades is extremely likely. In such context, the acquisition of dedicated high resolution T series proves to be crucial for increasing our detection, understanding and forecasting abilities.     

Vulnerability and adaptation of coastal communities to climate variability and sea-level rise: Their implications for integrated coastal management in Cavite City,Philippines

Coastal areas are vulnerable to the impacts of climate change and sea-level rise. These impacts will exacerbate the risks posed by the continuing environmental degradation confronting the coastal communities.Adopting a participatory research approach, the study examines the vulnerability of socioeconomic groups among the coastal population in Cavite City, Philippines, their current adaptation strategies and their adaptive capacity to cope with the impacts of climate variability and extremes and sea-level rise. Under a future scenario of a 1-m accelerated sea-level rise (ASLR), the study also looks into its potential effects on these urban coastal communities and ecosystems.In the context of poverty reduction and sustainable development, this study suggests a local framework for integrating adaptation strategies and actions into integrated coastal management (ICM) planning. It also recommends appropriate policy and institutional reform, capacity building and improved knowledge management towards increasing the resilience and adaptive capacity of these coastal communities to current and future climate risks.     

中国近海营养盐结构失衡与磷消耗问题及其生态环境效应的研究进展

近海的生态环境问题态势严峻。在机制上，普遍认为富营养化是导致近海环境恶化的主导因子，但实际上，营养盐的结构失衡对近海生态环境问题的产生可能起到了更重要的作用。目前关于营养盐结构失衡的主导因素和机制尚缺乏全面系统的研究。本文基于对已有数据和文献资料的整合分析发现，由于存在强烈的人类活动影响，中国近海营养盐结构失衡问题较过去更为突出，且可能引发潜在“磷消耗”问题，其影响在某种程度上较传统意义上的磷限制要强，并进而产生深远的生态环境效应。据此提出，今后相关的研究应该特别关注河流流域-近海环境变化和它们之间的内在关联，阐明控制近海营养盐浓度、形态、分布和结构的关键生物地球化学过程，量化近海氮与磷的滞留机制与效率，揭示浮游植物群落结构变化与营养盐结构失衡和磷消耗的耦合关系及其生态效应等，最终制定中国入海河流与近海氮磷协同控制的适应性管理措施。     

The structure of the benthic macrofaunal assemblages and sediments characteristics of the Paraguaçu estuarine system, NE, Brazil

The structure of the benthic macrofaunal assemblages of the estuarine portion of Paraguaçu River, NE, Brazil, and its relationship with surface sediment characteristics (trace metals, PAHs, nutrients and grain size) and physical variables were investigated at ten stations on two contrasting occasions, summer (dry season) and winter (rainy season). A total of 1258 individuals (632 in winter and 626 in summer) and 62 taxa representing polychaetes, crustaceans, bivalves, echinoderms, bryozoans, sponges, cnidarians and cephalochordates were collected. Benthic assemblages in the upper estuary were unlike those in the lower estuary and a clear substitution of benthic taxa along the estuary was observed. Macrofaunal invertebrates in the low salinity region, composed of coarse sediments, were dominated by tellinids, venerids (bivalves), cirolanids (isopods), cyclopoids (copepods), and nereidids (polychaetes). While the high salinity region, composed of fine sediments, were dominated by nuculids (bivalves), cirratulids (polychaetes), and by amphiurids (ophiuroids). The Paraguaçu estuarine system is not severely affected by anthropogenic activities. In the great majority of the study sites, concentrations of trace metals and PAHs in the sediments were near background values. Nutrients values were also low. We formulated new models of taxon distribution and suggested detailed studies on the effects of salinity variation and studies using functional approaches to better understand the processes causing the spatial patterns in tropical estuarine benthic assemblages.     

Mid-Holocene evolution and paleoenvironments of the shoreface–offshore transition, north-eastern Argentina: New evidence based on benthic microfauna

A sedimentary record spanning 5792–5511 cal yr BP and 3188–2854 cal yr BP was recovered at 36° 45′ 43″ S–56 ° 37′ 13″ W, south-west South Atlantic. The sedimentological features and micropaleontological (benthic foraminifera and ostracoda) content were analyzed in order to reconstruct paleoenvironmental conditions. Considerable environmental fluctuations are indicated by all these proxies. Five different stages were distinguished: Stage 1 (ca. 5800–5000 cal yr BP) consists of muddy sand with abundant microfossils. In this interval, species typical for inner marine shelf environments maintained a high abundance. Stage 2 consists of plastic light greenish grey clays barren of microfossils, and probably represents fluvial input from the de la Plata River to the shelf contemporaneous of a lowering of sea level. Stage 3 is composed of brownish yellow sandy silts, and represents increasing marine conditions in the area as reflected by higher faunal diversity and typical foraminifera of inner shelf environments. Stage 4 is made of homogeneous mud, barren of microfossil, which represents a new pulse of fluvial input to the shelf in consequence of a new fall in sea level. The final part of the core (Stage 5) is a coarsening upward sequence, grading from greeny brown clayey sandy silts to coarse shelly sands and represents the modern sedimentation in the area. This interpretation strengthens the stepped model of late-Holocene sea-level fall between 5511–5792 cal yr BP and 2854–3188 cal yr BP in Buenos Aires coast, and agrees with the relative sea-level history previously proposed by some authors from western South Atlantic coasts.     

First record of a Vestimentifera (Polychaeta: Siboglinidae) from chemosynthetic habitats in the western Mediterranean Sea—Biogeographical implications and future exploration

A new population of vestimentiferan tubeworms was discovered during a recent expedition to a mud volcano field in the Alboran Sea, western Mediterranean Sea. Morphological data and mitochondrial cytochrome-c-oxidase subunit 1 (COI) sequences show that the Alboran tubeworm is essentially identical to Lamellibrachia sp. found in the eastern Mediterranean. This is the first record of a vestimentiferan species in the western basin of the Mediterranean, an area with direct connection to the Atlantic via the Strait of Gibraltar and therefore of great importance to the study of distributional patterns and evolution of Mediterranean species. We examine the current hypotheses on the biogeographic distribution of vestimentiferan species in the eastern Atlantic and Mediterranean Sea and conclude that independently of when Lamellibrachia colonized the Mediterranean, neither the present hydrological settings of both Mediterranean Sea and Atlantic Ocean, nor vestimentiferans reproductive biology are impeditive to the presence of the Mediterranean species of Lamellibrachia in the NE Atlantic. The West African and Lusitanian margins are the most likely places to find living populations of this species in the NE Atlantic.     

Spatial and seasonal variations in depth profile of trace metals in saltmarsh sediments from Sapelo Island, Georgia, USA

This study was undertaken to elucidate the impact of early diagenetic processes on the accumulation of trace metals in Sapelo Island saltmarsh sediments as a function of time, space and sediment properties. Samples were collected from three sites in summer (May 1997) and winter (January 1998) along a transect from an unvegetated Creek Bank through a vegetated Tidal Levee to the vegetated midmarsh with evident lateral heterogeneity caused by hydrologic regime, macrophytes and microbial and macrofaunal activities. A suite of trace metals (As, Ba, Cr, Co, Cu, Cd, Mo, Ni, Pb, Th, Ti, U, V, Zn and Zr) was analyzed to obtain their depth-distribution at the three sites. Spatially marked differences were observed, that were primarily related to hydraulic flushing of trace metals away from the sites in high-energy regimes, rapid downward mixing and reworking of sediment via bioturbation, and below-ground degradation and production of Spartina biomass. Although sulfate reduction and the formation of acid volatile sulfide and pyrite were dominant processes throughout the marsh, the trace metal scavenging role of sulfides was not apparent. However, possible sulfurization of organic matter, leading to enhanced trapping of trace metals with organic carbon, may have played an important role in sequestration of trace metals.No similarity was observed visually between the depth trends of trace metals and sediment properties (grain size, iron-oxyhydroxide content, acid volatile sulfides and pyrite content) that are known to play a major role in trace metal partitioning. Only organic carbon content closely followed the trace metal profiles at all the three sites. Minor variation in depth-integrated sediment trace metal content was observed seasonally at each of the three sites. Furthermore, the depth trend of profiles of individual trace metals also did not vary significantly over the seasons either.     

The role of inflow magnitude and frequency on plankton communities from the Guadalupe Estuary,Texas, USA: Findings from microcosm experiments

Changes in magnitude and frequency of inflow results in subsequent alterations in the delivery of nutrients essential for phytoplankton growth and competition producing variations in community composition and nutritional value of phytoplankton. Zooplankton demographics are likely directly influenced by pulsed inflows due to flushing losses, whereas they are also indirectly affected by changes in prey quality. In this study, we report the potential effect of pulsed inflows on the plankton community of the Guadalupe Estuary. Microcosms were used that allowed control of light intensity and photoperiod, turbulence, temperature, nutrient loading, and flushing magnitude and periodicity. Our microcosm experiments were novel as they utilized natural plankton communities, thereby allowing the simultaneous interaction between hydrology, resource availability and grazing. Results show differences in microcosms according to magnitude and frequency of flushing. For example, copepod population density was greatest at the annual mean inflow magnitude. At half the annual mean inflow a decline in prey quality likely resulted in poorer grazer performance, and at double the annual mean inflow magnitude increased flushing losses prevented the incidence of higher copepod densities. Similarly, pulsed inflows resulted in greater copepod population densities, higher overall phytoplankton biomass, and dominance of centric diatoms (known to be faster growing and more edible). While reduced freshwater inflow associated with increasing anthropogenic demands often strains the needs of estuarine systems, the effects of reduced river input may be alleviated with several management options including manipulation of the timing, frequency, and magnitude of freshwater inflows. Before implications for management can be discerned from these findings, however, larger scale experiments are needed focus on the roles of inflow magnitude and frequency.     

Short-term variability of suspended sediment and phytoplankton in Tampa Bay,Florida: Observations from a coastal oceanographic tower and ocean color satellites

We examined short-term phytoplankton and sediment dynamics in Tampa Bay with data collected between 8 December 2004 and 17 January 2005 from optical, oceanographic, and meteorological sensors mounted on a coastal oceanographic tower and from satellite remote sensing. Baseline phytoplankton (chlorophyll-a, Chl) and sediment concentrations (particle backscattering coefficient at 532 nm, bbp(532)) were of the order of 3.7 mg m⁻³ and 0.07 m⁻¹, respectively, during the study period. Both showed large fluctuations dominated by semidiurnal and diurnal frequencies associated with tidal forcing. Three strong wind events (hourly averaged wind speed >8.0 m s⁻¹) generated critical bottom shear stress of >0.2 Pa and suspended bottom sediments that were clearly observed in concurrent MODIS satellite imagery. In addition, strong tidal current or swells could also suspend sediments in the lower Bay. Sediments remained suspended in the water column for 2–3 days after the wind events. Moderate Chl increases were observed after sediment resuspension with a lag time of ˜1–2 days, probably due to release of bottom nutrients and optimal light conditions associated with sediment resuspension and settling. Two large increases in Chl with one Chl > 12.0 mg m⁻³ over ˜2 days, were observed at neap tides. For the study site and period, because of the high temporal variability in phytoplankton and sediment concentrations, a monthly snapshot can be different by −50% to 200% from the monthly “mean” chlorophyll and sediment conditions. The combination of high-frequency observations from automated sensors and synoptic satellite imagery, when available, is an excellent complement to limited field surveys to study and monitor water quality parameters in estuarine environments.     

闽南近海关头斜齿鲨的精巢结构及精子发育

关头斜齿鲨是闽南近海的常见板鳃类。本文研究了其精巢的结构及 精子的发育。尖头斜齿鲨的精巢属于放射型,其基本单位是圆形或椭圆形的壶腹,生 精区位于精巢的一侧,生精壶腹由此区向精巢对壁发育,每一壶腹中的细胞处于同一 发育时期。在精巢靠近成熟壶腹一侧有精子输出管。精子的发生可分为３个时期。精 原细胞增殖期、精母细胞期、精子形成期。尖头斜齿鲨的精子细长,呈流线形,头部钝 圆,其形成期约为７个月。精巢的结构随体长和季节的更动而变化。根据采得的标本 做组织切片,发现若发育过程中精巢发生断裂、分成两段,断裂处可各自愈合,并不影 响其正常结构。     

Zonation and spatial distribution of littoral fish communities from the southwestern Finnish coast (Archipelago and Bothnian Sea,Northern Baltic Sea)

The aim of our study was to test whether the distribution of littoral fish assemblages would reflect both their immediate environment with reference to local underwater vegetation, including larger scale geographic archipelagial zonation. A total of 62 locations were sampled using beach seine and underwater video along the southwestern Finnish coastline in summer 2001. At all locations, water temperature, water transparency and benthic vegetation patterns (depth ranges of plant species or taxa) were recorded. Using correspondence analysis, our results showed a clear division of the Archipelago Sea into three separate zones based on littoral fish species assemblages. Overall, fish assemblages formed three distinct site groups, being dominated by pike and cyprinids, by percids and gobies, or by gasterosteids, and showed clear inner, middle and outer archipelago zones respectively, within the study area. Our results suggest that while vegetation in the study sites was diverse, it failed to express the zonation reflected by the littoral fish assemblages, which showed a definite zonation pattern which broadly reflected previous reports using both physical and biological parameters. We interpret our results to show that littoral vegetation is better in expressing small-scale differences between study sites, while littoral fish communities are more robust in detecting changes over a larger geographical scale.     

Scales of recruitment variability in warming waters: Comparing native and introduced oysters in Hood Canal,Washington, USA

The effect of climate change on natural oyster recruitment has the potential to disrupt many of the ecosystem services oysters provide. Due to the temperature‐sensitivity of reproduction, oyster recruitment may shift as water temperatures rise. A biological imprint of climate change was revealed in a multi‐decadal time series of recruitment of non‐native Pacific oysters (Crassostrea gigas) in the main stem of Hood Canal, Washington, USA, extracted from historic fishery documents. Water in July and August warmed significantly from 1945 to 1995 (0.028 ± 0.004°C per year [±SE]) and accounted for an increase in Pacific oyster recruitment (7% per year, 0.028 ± 0.006 spat per year on log scale [±SE]); recruitment also strongly tracked inter‐annual variability in summer water temperature. Methods used to collect historical data were repeated in 2013–2015 when recruitment of both Pacific oysters and native Olympia oysters (Ostrea lurida) were recorded in main stem and lower Hood Canal. Both historic and modern data show large variation within and between years for temperature as well as recruitment. The modern data add information regarding spatial variation, in that recruitment patterns in the two regions of Hood Canal were decoupled. As temperatures continue to increase, non‐native Pacific oysters are likely to be favored over Olympia oysters, which recruit earlier at lower temperatures and presently contribute less than half of total oyster recruits. Future recruitment, however, may be limited by environmental factors other than temperature, a point indicated particularly in Hood Canal where many subtidal species already respond strongly to gradients in dissolved oxygen.