Spatial and temporal changes in reef fish assemblages on disturbed coral reefs,north Pacific coast of Costa Rica

Benthic structure of coral reefs determines the availability of refuges and food sources. Therefore, structural changes caused by natural and anthropogenic disturbances can have negative impacts on reef‐associated communities. During the 1990s, coral reefs from Bahía Culebra were considered among the most diverse ecosystems along the Pacific coast of Costa Rica; however, recently they have undergone severe deterioration as consequence of chronic stressors such as El Niño‐Southern Oscillation and harmful algal blooms. Reef fish populations in this area have also been intensely exploited. This study compared reef fish assemblages during two periods (1995–1996 and 2014–2016), to determine whether they have experienced changes as a result of natural and anthropogenic disturbances. For both periods, benthic composition and reef fish abundance were recorded using underwater visual censuses. Live coral cover (LCC) decreased from 43.09 ± 18.65% in 1995–1996 to 1.25 ± 2.42% in 2014–2016 (U = 36, p < 0.05). Macroalgal cover (%) in 2014–2016 was sixfold higher than mean values reported for the Eastern Tropical Pacific region. Mean (±SD) fish species richness in 1995–1996 (36.67 ± 14.20) was higher than in 2014–2016 (23.00 ± 9.14; U = 20, p < 0.05). Over 40% of reef fish orders observed in 1995–1996 were not detected in the 2014–2016 surveys, including large‐bodied predators. Reduction in abundance of fish predators such as sharks, grunts, and snappers is likely attributed to changes in habitat structure. Herbivorous such as parrotfishes and pufferfishes increased their abundance at sites with low LCC, probably in response to predators decline and increased algal cover. These findings revealed significant degradation and drastic loss of structural complexity in coral reefs from Bahía Culebra, which now are dominated by macroalgae. The large reduction in structural complexity of coral reefs has resulted in the loss of diversity and key ecological roles (e.g., predation and herbivory), thus potentially reducing the resilience of the entire ecosystem.     

Spatial patterns in fish herbivory in a temperate Australian seagrass meadow

Seagrass grazing by fish was measured in a large seagrass-dominated temperate bay (Geographe Bay, Western Australia) to examine whether: (1) seagrass herbivory occurs; (2) the level of herbivory is influenced by nitrogen in seagrass leaves; and (3) how herbivory and herbivorous fish communities vary with water depth and seagrass species. Species and abundance of fish and herbivore bite marks on seagrass leaves were recorded from diver surveys of 23 sites of varying depth ranging from 1 m to 18 m. Posidonia sinuosa, Posidonia coriacea, Amphibolis griffithii, and Amphibolis antarctica seagrass leaves were collected, dried and analysed for total nitrogen. Evidence for low levels of seagrass grazing was found at over half the sites surveyed, though high levels of grazing were recorded at only one site. An east–west pattern was observed in the location of grazed sites and of herbivorous fish species that corresponded with the general prevalence of patch reefs, indicating that reef associated fish assemblages may be responsible for the observed grazing. Total nitrogen was elevated in seagrass leaves associated with drains, although increased nitrogen was not associated with increased grazing. While grazing was recorded in this temperate seagrass meadow, the abundance of herbivorous fish was low and the amount of biomass removed by them was small compared to the balance of the meadow remaining, and to seagrass grazing studies elsewhere.     

The effects of trophic interactions and spatial competition on algal community composition on Hawaiian coral reefs

Much of coral reef ecology has focused on how human impacts change coral reefs to macroalgal reefs. However, macroalgae may not always be a good indicator of reef decline, especially on reefs with significant sea urchin populations, as found in Kenya and Hawaii. This study tests the effects of trophic interactions (i.e. herbivory by fishes and sea urchins) and spatial competition (between algae and coral) on algal community structure of reefs surrounding two Hawaiian Islands that vary in their level of human impacts. Reef‐building organisms (corals and crustose coralline algae) were less abundant and turf algae were more abundant on Maui as compared to Lanai, where human impacts are lower. In contrast to previous studies, we found no evidence that macroalgae increased with human impacts. Instead, low turf and macroalgal abundance were best explained by the interactive effects of coral cover and sea urchin abundance. Fishing sea urchin predators appeared to have cascading effects on the benthic community. The absence of sea urchin predators and high sea urchin densities correspond to a disproportionately high abundance of turf and crustose coralline algae. We propose that high turf algal abundance is a better indicator of reef decline in Hawaii than high macroalgal abundance because turf abundance was highest on reefs with low coral cover and few fish. The results of this study emphasize that understanding changes in community composition are context‐dependent and that not all degraded reefs look the same.     

Top–down and bottom–up regulation of macroalgal community structure on a Kenyan reef

Top–down and bottom–up regulation in the form of grazing by herbivores and nutrient availability are important factors governing macroalgal communities in the coral reef ecosystem. Today, anthropogenic activities, such as over-harvesting of herbivorous fish and sea urchins and increased nutrient loading, are altering the interaction of these two structuring forces. The present study was conducted in Kenya and investigates the relative importance of herbivory and nutrient loading on macroalgal community dynamics, by looking at alterations in macroalgal functional groups, species diversity (H′) and biomass within experimental quadrats. The experiment was conducted in situ for 42 days during the dry season. Cages excluding large herbivorous fish and sea urchins were used in the study and nutrient addition was conducted using coated, slow-release fertilizer (nitrogen and phosphorous) at a site where herbivory is generally low and nutrient levels are relatively high for the region. Nutrient addition increased tissue nutrient content in the algae, and fertilized quadrats had 24% higher species diversity. Herbivore exclusion resulted in a 77% increase in algal biomass, mainly attributable to a >1000% increase in corticated forms. These results are in accordance with similar studies in other regions, but are unique in that they indicate that, even when prevailing nutrient levels are relatively high and herbivore pressure is relatively low, continued anthropogenic disturbance results in further ecological responses and increased reef degradation.     

Distribution and feeding patterns of juvenile parrotfish on algal‐dominated coral reefs

By the consumption of algae, parrotfishes open space for young coral settlement and growth, thus playing a central role on the maintenance of coral reefs. However, juvenile parrotfish ecology is often overlooked due to the difficulty discerning species during this phase. Herein, we present the first attempt to investigate changes in habitat use and diet that happen to juveniles of the Redeye parrotfish Sparisoma axillare, focusing on four zones within an algal‐dominated reef: the macroalgal beds, back reef, reef flat, and fore reef. Smaller S. axillare juveniles (<5 cm) preferred to inhabit the macroalgal beds and the reef flat, whereas juveniles larger than 5 cm were more abundant in the back and fore reefs due to distinct post‐settlement habitat conditions. Aggressive interactions with the territorial damselfish Stegastes fuscus were the primary driving factor of juvenile distribution and feeding rates. Attack rates increased with juvenile size and the lowest bite rates were observed in zones with higher densities of territorial damselfish. In previous studies, the persistence of parrotfish recruits in habitats dominated by damselfish was reduced, but newly settled parrotfish occurred more densely within the damselfish domain by behaving as a cryptic reef fish. As these juveniles grew, their bite rates increased, a change associated with a shift from cryptic to roving behavior. Feeding preferences were determined by substrate cover, where juveniles fed on available food sources in each habitat. Juveniles relied on jointed calcareous algae in habitats dominated by these algae, a pattern not observed for thick leathery algae. Filamentous algae were the preferred food for smaller fish; for individuals greater than 10 cm, a higher ingestion of sand was observed. Most studies evaluating the functional role of parrotfish do not consider species feeding preferences. However, the potential for a species to turn an impacted reef back to a coral‐dominated phase is influenced by their food selection, which is dependent on the algal species composition.     

Long‐term temporal and spatial patterns in bioeroding sponge distribution at the Abrolhos Bank,Brazil, Southwestern Atlantic

Bioeroding sponges belong to the most dominant bioeroders, significantly contributing to the erosion of coral reefs. Some species are tolerant or even benefit from environmental conditions such as ocean warming, acidification, and eutrophication. In consequence, increases in sponge bioerosion have been observed on some coral reefs over the last decades. The Abrolhos Bank is the largest coral reef system in the South Atlantic. It has been affected by sedimentation, eutrophication, overfishing, and climate change, mainly affecting coastal reefs, and at lesser intensity outer ones as well. This study aimed to describe spatial and temporal patterns in bioeroding sponge distribution in carbonate substrates in the Abrolhos Bank. Photo‐quadrats were used to compare bioeroding sponge abundance between two shallow reefs: a coastal, Pedra de Leste (PL), and an outer reef, Parcel dos Abrolhos (PAB). Each individual was delimitated over the substrate by determining the sponge surface through a line connecting the outermost papillae. The study was conducted over 6 years in 2008–2009 and 2013–2016. Four species of bioeroding sponges were identified: Cliona carteri Ridley, 1881, C. delitrix Pang, 1973, C. cf. schmidtii Ridley, 1881, and Siphonodictyon coralliphagum Rützler, 1971. The distribution and abundance of species varied between the inner and outer reefs and across the years, and displayed certain selectivity for the calcareous substrates recorded. Crustose coralline algae (CCA) were the main substrate excavated by the most abundant bioeroding species, C. carteri, and represented 70% of the substrate types occupied by this sponge (CCA, coral overgrown by CCA and plain coral). The highest abundance of bioeroding sponges observed in photo‐quadrats was 21.3 individuals/m² at the outer reefs (PAB) in 2014. The abundances or areal extents of bioeroding sponges were up to 10 times greater on the outer reefs than on the coastal ones, where sedimentation is higher and more strongly influenced by siliciclastic material. Moreover, a higher herbivorous fish biomass has been reported on outer reefs which could also influence the higher abundance of bioeroding sponges in outer reefs. During the study period of 6 years, an increase in bioeroding sponge abundance was observed at the outer reefs (PAB), with the sea surface temperature increase. As CCA have an important role in reefal cementation and carbonate production in the Abrolhos reefs, a bioerosion impact might be expected, in particular, on the outer reefs.     

Experimental bleaching of a tropical sea anemone in situ

Bleaching (whitening) of cnidarians such as corals and sea anemones has caused widespread degradation of coral reefs around the world and is therefore an urgent issue for coral reef science and conservation. Although cnidarians often bleach in aquaria, methods for experimental induction of bleaching in wild cnidarians are lacking, which impedes scientists’ ability to understand the ultimate effects of bleaching on the broader ecosystem. In this study, we investigated the utility of an in situ method for experimental induction of bleaching in the tropical sea anemone Heteractis crispa. Healthy, wild anemones were covered with opaque black plastic sheets, mesh cages or left undisturbed (controls) and tentacle colour and body size were monitored with a colour reference card and flexible tape, respectively, every 1–3 days for 15 days. Caged and control anemones remained unchanged for the duration of the experiment, but covered anemones commenced whitening after 4–6 days and were completely white after 7–14 days (mean time to bleaching ± SE = 10.1 ± 0.7 days). Experimental bleaching occurred without reduction in anemone body size and was visibly similar to natural bleaching seen previously in H. crispa. We hypothesize that light‐deprivation, reduced water flow, physical contact or some combination of these factors caused the bleaching. This study provides the basis for a simple and rapid method of inducing bleaching in situ, which releases scientists’ dependence on sporadic natural bleaching events or artificial aquarium experiments, and provides a means to investigate the effects of bleaching on other ecosystem components such as fishes.     

Spatial pattern of coastal fish assemblages in different habitats in North‐western Mediterranean

Variability of fish assemblages across habitat structures can depend on spatial scales. A hierarchical sampling design was used to assess the spatial variability of temperate fish assemblages in different habitats and at multiple scales. Underwater visual censuses were carried out along the coasts of Elba Island (NW Mediterranean) on Posidonia oceanica beds, rocky algal reefs and sandy habitat at three spatial scales, namely tens of metres (individual replicates), hundreds of metres (sites) and tens of kilometres (locations). At the assemblage level, there was a clear relationship between fish and habitat type and the observed habitat‐related differences were largely dependent on species identity. Fish assemblages on P. oceanica beds and rocky reefs shared a high number of species, whereas overlap with sandy assemblages was negligible. Multivariate analyses revealed significant differences in fish assemblages among habitats, although there was also a significant habitat × site interaction. These differences relied mainly upon assemblage composition and species richness. Assemblages on rocky reefs and P. oceanica meadows usually harboured a higher number of species and individuals compared with sandy assemblages. Nevertheless, the patterns of habitat‐related differences in species richness and, especially, in the total number of fish, changed significantly from site to site. Eight species showed significant differences over habitats, but they were not consistent due to the interaction of habitat with site. Predictability of fish at both assemblage and population levels decreased with the scale of observation, and the spatial pattern of fish observed at the smallest scale was likely dependent on factors other than habitat type.     

The influence of reef type and seasonality on population structure of coral‐reef fishes within Malindi Marine Park,Kenya

Effective conservation requires knowledge of the effects of habitat on distribution and abundance of organisms. Although the structure of coral reef fish assemblages is strongly correlated with attributes of reef structure, data relating reef types to fish assemblages are scarce. In this study we describe the influence of gross habitat characteristics and seasonality on coral reef fish assemblages of fringing and patch reefs in Kenya. Results showed that total fish abundance was not significantly different between the reefs; however, the fringing reef had higher species diversity during both the northeast (42 spp.) and southeast (36 spp.) monsoon seasons when compared to the patch reef. The more fished species (e.g. Siganus sutor and Lethrinus mahsena) were more abundant on the patch reef in both seasons. Statistical analysis indicated common species between the reefs were more abundant on the fringing reef. Seasons affected abundance of the more vagile species (S. sutor), whereas the reef‐attached sky emperor, L. mahsena was affected more by reef type than by seasons. No significant interaction effects of habitat and seasons were found, indicating independence of habitat and environmental variability in affecting fish assemblages on the reefs. Smaller sized fish dominated the fringing reef more than the patch reef, whereas the skewness index (Sk) indicated a normal‐sized frequency distribution on the patch reef. Trophic structure of the fishes varied more within than between reefs, whereas fish assemblage structure was affected more by seasons on the fringing reef. These results suggest that conservation measures such as marine protected area (MPA) design and setting should consider effects of reef morphology and environmental variability on coral‐reef fish assemblage structure.     

Spatial distribution of surgeonfish and parrotfish in the north sector of the Mesoamerican Barrier Reef System

Surgeonfish and parrotfish play an important role in structuring the benthic communities of coral reefs. However, despite their importance, little is known about their distribution patterns in the north sector of the Mesoamerican Reef System. This study evaluated the distribution of these fish in 34 sites in four habitats (lagoon, front, slopes and terrace) along a depth gradient (c 0.5–20 m). These herbivorous fish were assessed by visual censuses. Species dominance was evaluated for each habitat using SIMPER analysis. Habitat characteristics data were collected to determine the relationship between habitat conditions and spatial variations in herbivorous fish (using abundance and biomass as a proxy) via redundancy analysis. The herbivorous fish assemblage had a low density (fish per 100 m²) and biomass (g·100 m^?2) in comparison with assemblages in similar studies. In contrast, species richness was high compared with other studies in the Caribbean. Spatial variation of the abundance, biomass and size of herbivorous fish was strongly related to coral and seagrass cover, as well as to depth and rugosity. These four variables were critical in controlling the distribution patterns of the herbivorous fish assemblages. No associations were found between fish and macroalgae or any other benthic group. The present study indicates that the species richness of surgeonfish and parrotfish was not regionally affected by the dominance of macroalgae in the habitats studied. Seagrass beds and the coral reef matrix need to be preserved for the herbivorous fish assemblages to remain healthy and capable of controlling excess macroalgae growth.     

Explaining island‐wide geographical patterns of Caribbean fish diversity: A multi‐scale seascape ecology approach

Geographical patterning of fish diversity across coral reef seascapes is driven by many interacting environmental variables operating at multiple spatial scales. Identifying suites of variables that explain spatial patterns of fish diversity is central to ecology and informs prioritization in marine conservation, particularly where protection of the highest biodiversity coral reefs is a primary goal. However, the relative importance of conventional within‐patch variables versus the spatial patterning of the surrounding seascape is still unclear in the ecology of fishes on coral reefs. A multi‐scale seascape approach derived from landscape ecology was applied to quantify and examine the explanatory roles of a wide range of variables at different spatial scales including: (i) within‐patch structural attributes from field data (5 × 1 m² sample unit area); (ii) geometry of the seascape from sea‐floor maps (10–50 m radius seascape units); and wave exposure from a hydrodynamic model (240 m resolution) for 251 coral reef survey sites in the US Virgin Islands. Non‐parametric statistical learning techniques using single classification and regression trees (CART) and ensembles of boosted regression trees (TreeNet) were used to: (i) model interactions; and (ii) identify the most influential environmental predictors from multiple data types (diver surveys, terrain models, habitat maps) across multiple spatial scales (1–196,350 m²). Classifying the continuous response variables into a binary category and instead predicting the presence and absence of fish species richness hotspots (top 10% richness) increased the predictive performance of the models. The best CART model predicted fish richness hotspots with 80% accuracy. The statistical interaction between abundance of living scleractinian corals measured by SCUBA divers within 1 m² quadrats and the topographical complexity of the surrounding sea‐floor terrain (150 m radius seascape unit) measured from a high‐resolution terrain model best explained geographical patterns in fish richness hotspots. The comparatively poor performance of models predicting continuous variability in fish diversity across the seascape could be a result of a decoupling of the diversity‐environment relationship owing to structural degradation leading to a widespread homogenization of coral reef structure.     

Ecological assessments of the coral reef communities in the Eastern Caribbean and the effects of herbivory in influencing coral juvenile density and algal cover

Caribbean reefs have been unevenly surveyed, with many areas lacking baseline data. In this study, the current status of Orbicella reefs, a structurally complex forereef habitat, was quantified in an understudied region, the Eastern Caribbean. During 2011 the same observers surveyed benthic assemblages, coral juvenile density, herbivorous fishes, and invertebrates at 30 Orbicella reefs in four Eastern Caribbean areas: Antigua, Barbados, St Lucia, and St Vincent and the Grenadines (hereafter St Vincent). Not all Orbicella forereefs were functionally the same in the Eastern Caribbean. Benthic communities and herbivorous fishes varied greatly among islands. Hard coral had the highest overall percent cover on most reefs in this study, with an average cover of 22%, and was greater than fleshy macroalgal cover at 83% of the sites. Overall, coral juvenile density was low but was positively associated with higher densities of Diadema antillarum, highlighting the importance of herbivory on the reefs. Nearshore coral reefs in Barbados were in a better state than other areas, exhibiting higher coral cover dominated by spawning corals, higher densities of coral juveniles exhibiting higher coral cover dominated by spawning corals, higher densities of coral juveniles and D. antillarum. Low biomass of herbivorous fishes at a majority of the coral reef sites is of major concern for the functioning of these reefs. Conservation of parrotfishes and other herbivores is necessary given the abundance of algae on most of these reefs and the beneficial effect of their presence on coral juveniles. This is the first comprehensive study that compares the state of Orbicella reefs in the Eastern Caribbean, providing valuable information that will be useful in creating realistic targets for future management and conservation.     

Use of riverine through reef habitat systems by dog snapper (Lutjanus jocu) in eastern Brazil

The early life history of Western Atlantic snappers from the Southern hemisphere is largely unknown. Habitat use of different life stages (i.e. size categories) of the dog snapper (Lutjanus jocu) was examined across the largest South Atlantic reef–estuarine complex (Abrolhos Shelf, Brazil, 16–19° S). Visual surveys were conducted in different habitats across the shelf (estuary, inner-shelf reefs and mid-shelf reefs). Lutjanus jocu showed higher densities on inner-shelf habitats, with a clear increase in fish size across the shelf. Individuals <7 cm were associated with both the estuary (mangrove and rocky habitats) and inner-shelf reefs (particularly shallow fore-reefs and tide pools). Individuals ranging 10–30 cm were broadly distributed, but consistently more abundant on inner-shelf reefs. Individuals between 30 and 40 cm were more common on mid-shelf reefs, while individuals >40 cm were recorded only on mid-shelf reefs. Literature data indicate that individuals ranging 70–80 cm are common on deep offshore reefs. This pattern suggests that the dog snapper performs ontogenetic cross-shelf migrations. Protecting portions of the different habitats used by the dog snapper during its post-settlement life cycle is highlighted as an important conservation and management measure.     

Sources and threats of chronic tissue loss on coral reefs in the Lakshadweep Islands,Indian Ocean

Tissue degradation and resulting mortality are major threats to coral reefs around the world. Information on interactions of the major environmental factors that mediate tissue loss and mortality in coral reefs is of great importance. It is essential to understand the prevailing reef health conditions and to develop appropriate management actions. In the present study, a series of benthic surveys conducted in the Lakshadweep Islands revealed the interaction of major biological factors in causing tissue loss and mortality. Hierarchical regression analysis revealed interactions of various environmental scenarios. Tissue loss was prevalent in islands with high cover of massive corals (m = 20.91) and low in islands dominated by branching corals (m = 0.61). Hierarchical regression analysis revealed black band disease (β = .59; p < .001) and algal interactions (β = .48; p < .001) to be major factors responsible for coral mortality caused by tissue loss in the region.     

Impact of repetitive thermal anomalies on survival and development of mass reef‐building corals in the Maldives

The distribution of dominant coral genera and their response to the recent sea temperature anomalies in the last three decades are analyzed across reefs of the Maldivian Archipelago, which spans 860 × 120 km in the central Indian Ocean. The Maldives suffered one of the worst coral mortality rates in the Indian Ocean in the 1998 warming event and experienced two sub‐lethal thermal anomalies in 2003 and 2010. The results showed that the Acropora proved an important driver of post‐1998 recovery and has become a major dominant genus in most Maldivian reefs at present. The average coral cover and proportion of acroporids have decreased from south to north and represent correspondently 70.6/59% for the southern atoll, 62/53% for the central atoll and 33/10.3% for the northernmost atoll. Stylophora, Seriatopora and the hydrocoral Millepora were not found and are considered candidates for local extirpation from the Maldives. Higher thermal variability and frequency of thermal stress might lead to the decrease in the abundance of susceptible taxa in the northernmost atoll. No phase‐shift to algae‐dominated reefs was observed in any of the three locations. Factors contributing to coral recovery and acclimatization are discussed.     

Habitat use patterns of the invasive red lionfish Pterois volitans: a comparison between mangrove and reef systems in San Salvador,Bahamas

The Indo‐Pacific red lionfish Pterois volitans is widespread both in its native and its non‐native habitats. The rapid invasion of this top predator has had a marked negative effect on fish populations in the Western Atlantic and the Caribbean. It is now well documented that lionfish are invading many tropical and sub‐tropical habitats. However, there are fewer data available on the change in lionfish abundance over time and the variation of body size and diet across habitats. A recent study in San Salvador, Bahamas, found body size differences between individuals from mangrove and reef systems. That study further suggested that ontogenetic investigation of habitat use patterns could help clarify whether lionfish are using the mangrove areas of San Salvador as nurseries. The aim of the present study is to determine temporal trends in lionfish relative abundance in mangrove and reef systems in San Salvador, and to further assess whether there is evidence suggesting an ontogenetic shift from mangroves to reef areas. Accordingly, we collected lionfish from mangrove and reef habitats and calculated catch per unit effort (a proxy for relative abundance), compared body size distributions across these two systems, and employed a combination of stable isotope, stomach content, and genetic analyses of prey, to evaluate differences in lionfish trophic interactions and habitat use patterns. Our results show that populations may have increased in San Salvador during the last 4 years, and that there is a strong similarity in body size between habitats, stark differences in prey items, and no apparent overlap in the use of habitat and/or food resources. These results suggest that there is not evidence an for ontogenetic shift from mangroves to reefs, and support other studies that propose lionfish are opportunistic forages with little movement across habitats.     

Ecological assessment to detect imminent change in coral reefs of Admiral Cockburn Land and Sea National Park,Turks and Caicos Islands

Coral reefs of the Turks and Caicos Islands (TCIs) (Caribbean Sea) constitute some of the few pristine coral reef systems in the world and play a crucial role in the islands’ economy because they support rich fisheries catches and tourism development. Ambitious development plans involving increase in fishing and tourism pressures are about to bring changes in coastal zone resources of the TCIs associated with increased sediments and nutrients and reduced predation by herbivorous fish on coral reefs. Understanding change is critical when attempting to protect the resources that these coral reefs support and to adopt proper management strategies. Yet, an environmental assessment program to detect imminent human‐induced changes on the surrounding reefs of the TCIs is lacking. Thus, (i) we obtained baseline data on benthic composition and coral community structure at seven reef sites of representative reefs of the TCIs within the Admiral Cockburn Land and Sea National Park (ACLSNP) of South Caicos Island and (ii) performed a priori statistical power analysis to calculate replication requirements for safely and confidently detecting small (δ = 0.1), medium (δ = 0.3), and large (δ = 0.5) effect sizes for a number of relevant to anticipated changes, univariate, benthic indices and for power β = 0.95. The platforms of the margin reefs studied (9–12 m depth) appeared rather variable regarding benthic composition but quite homogeneous regarding hard coral community structure. Mean percent cover of algal functional groups was 0.1 ± 0.3 (mean ± sd) percent for coralline algae and Halimeda, 0.1 ± 0.6 (mean ± sd) percent for macroalgae, 21.7 ± 33 (mean ± sd) percent for turf algae and 4.8 ± 4.0 (mean ± sd) percent for hard coral cover. The dominant benthic component, however, was carbonate substrate (mean ± sd = 30.4 ± 34.3), thus indicating an accreting reef framework. Mean hard coral density, colony size and recruit density were 5.5 ± 1.8 (mean ± sd) corals per 20‐m line transect, 13.0 ± 2.3 (mean ± sd) cm maximum colony diameter, and 1.3 ± 1.4 (mean ± sd) recruits per square foot, respectively. Due to high natural variance, hard coral colony size and density were practically the most sensitive indices in detecting even small size changes on benthos. Also, the geometric mean of log‐transformed colony size‐frequency distributions of the most abundant hard coral taxa, i.e. Montastrea annularis, Agaricia spp., Siderastrea spp. and Porites asteroides were practically sensitive for the same purpose. We hope that the study will optimize the spatial component of a necessary environmental impact assessment program on coral reefs of the TCIs once the natural spatial variability of the system has been assessed and sensitive, benthic, univariate indices have been identified for representative reference coral reef sites of the TCIs.     

A potential new threat on the coral reefs of Puerto Rico: The recent emergence of Ramicrusta spp.

The rapid appearance of Ramicrusta spp. is described and analyzed from 40 permanent monitoring coral reef stations in Puerto Rico. Before 2016, Ramicrusta had not been observed from any of the reef monitoring stations. By 2018, it was present at 76% of all the monitoring stations. Ramicrusta was the dominant substrata type at all of the shallow reef sites sampled on the east coast (e.g., Fajardo, Culebra, and Vieques), reaching a cover (±SE) as high as 63.0 ± 5.8%. The spread of Ramicrusta occurred at the expense of historically resilient living benthic elements, such as turf algae. Since its detection in 2016, colonization of hard substrata by Ramicrusta remained constant, with the exception of two shallow reefs in Fajardo and Culebra, where the cover was significantly reduced by the scouring and or abrasive effects of two major hurricanes. The ecological implications of Ramicrusta prevalence on Puerto Rican reefs remain unclear; however, increasing herbivory might be a useful mitigation tool in the reduction of Ramicrusta abundance on coral reefs.     

Assessment of the distribution of sponge chips in the sediment of East Pacific Ocean reefs

Sponges are one of the principal agents of bioerosion and sediment production in coral reefs. They generate small carbonate chips that can be found in the sediments, and we investigated whether these could provide a means for assessment of bioerosion applicable to reef monitoring. We tested this hypothesis on samples from 12 Mexican coral reefs distributed along the Pacific coast, where boring sponges were particularly abundant, and quantified the amount of chips in samples of superficial sediment in three grain‐size fractions: fine (<44 μm), medium (44–210 μm) and coarse (>210 μm). The grain‐size distribution varied among reefs, with the majority of the sediment of most reefs being composed of coarse sands, and the medium and fine fractions dominating only at La Entrega and Playa Blanca. All the reefs presented clear evidence of bioerosion by sponges, with the characteristic chips present in the sediment, although at most sites the percentage of chips was very low (from 1% to 3% of the total sediment). Only at La Entrega and Playa Blanca did they constitute a significant fraction of the total sediment (18% and 16%, respectively). While not statistically significant, there was an interesting trend between sponge chips versus sponge abundance that suggests that quantification of the chips in the sediment could be used as a proxy for sponge erosion of the entire community, which cannot be estimated in by laboratory experiments. However, while this methodology could provide an integrated approach to monitor sponge bioerosion, more studies are necessary due to the influence of environmental factors on the transport and deposition of these chips.     

Coral colonization by the encrusting excavating Caribbean sponge Cliona delitrix

The Caribbean sponge Cliona delitrix is among the strongest reef space competitors; it is able to overpower entire coral heads by undermining coral polyps. It has become abundant in reefs exposed to organic pollution, such as San Andrés Island, Colombia, SW Caribbean. Forty‐four sponge‐colonized coral colonies were followed‐up for 13 months to establish the circumstances and the speed at which this sponge advances laterally into live coral tissue and the coral tissue retreats. Cliona delitrix presence and abundance was recorded at seven stations to interpret current reef space and coral species colonization trends. The spread of C. delitrix on a coral colony was preceded by a band of dead coral a few millimeters to several centimeters wide. However, the sponge was directly responsible for coral death only when live coral tissue was within about 2 cm distance; coral death became sponge advance‐independent at greater distances, being indirectly dependent on other conditions that tend to accelerate its retreat. Cliona delitrix advanced fastest into recently killed clean coral calices; however, sponge spread slowed down when these became colonized by algae. The lateral advance of C. delitrix was slower than other Cliona spp. encrusting excavating sponges, probably owing to the greater depth of its excavation into the substratum. Cliona delitrix prefers elevated portions of massive corals, apparently settling on recently dead areas. It currently inhabits 6–9% of colonies in reefs bordering San Andrés. It was found more frequently in Siderastrea siderea (the most abundant local massive coral), which is apparently more susceptible to tissue mortality than other corals. Current massive coral mortality caused by C. delitrix could initially change the relative proportions of coral species and in the long‐term favor foliose and branching corals.