Long-term changes in coral assemblages under natural and anthropogenic stress in Jakarta Bay (1920-2005)

Coral reefs in Jakarta Bay have been subjected to scientific studies since the 1920s. Also from that time on biological collections were made. The reefs in the Jakarta Bay have been under long-term natural and anthropogenic stress. With the biological collections and historical documents the coral species richness in Jakarta Bay around 1920 was reconstructed. New data from this bay and the adjacent offshore Thousand Islands archipelago were obtained during a 2005 research expedition. A comparison of the coral assemblages between 1920 and 2005 reveals a clear decline in species numbers. The most prominent results include the near-shore disappearance of species belonging to the families Acroporidae, Milleporidae, and to a lesser extent Poritidae. The overall coral species composition of the reefs has changed considerably, which is partly reflected in a strong decline in coral species richness. About half the number of species recorded in 1920 was found again in 2005.     

A continuous,real-time water quality monitoring system for the coral reef ecosystems of Nanwan Bay,Southern Taiwan

The coral reef ecosystems of Nanwan Bay, Southern Taiwan are undergoing degradation due to anthropogenic impacts, and as such have resulted in a decline in coral cover. As a first step in preventing the continual degradation of these coral reef environments, it is important to understand how changes in water quality affect these ecosystems on a fine-tuned timescale. To this end, a real-time water quality monitoring system was implemented in Nanwan Bay in 2010. We found that natural events, such as cold water intrusion due to upwelling, tended to elicit temporal shifts in coral spawning between 2010 and 2011. In addition, Degree Heating Weeks (DHWs), a commonly utilized predictor of coral bleaching, were 0.92 and 0.59 in summer 2010 and 2011, respectively. Though this quantity of DHW was below the presumed stress-inducing value for these reefs, a rise in DHWs in the future may stress the resident corals.     

Derelict fishing gear in the northwestern Hawaiian Islands: diving surveys and debris removal in 1999 confirm threat to coral reef ecosystems

Marine debris threatens Northwestern Hawaiian Islands' (NWHI) coral reef ecosystems. Debris, a contaminant, entangles and kills endangered Hawaiian monk seals (Monachus schauinslandi), coral, and other wildlife. We describe a novel multi-agency effort using divers to systematically survey and remove derelict fishing gear from two NWHI in 1999. 14 t of derelict fishing gear were removed and debris distribution, density, type and fouling level documented at Lisianski Island and Pearl and Hermes Atoll. Reef debris density ranged from 3.4 to 62.2 items/km². Trawl netting was the most frequent debris type encountered (88%) and represented the greatest debris component recovered by weight (35%), followed by monofilament gillnet (34%), and maritime line (23%). Most debris recovered, 72%, had light or no fouling, suggesting debris may have short oceanic circulation histories. Our study demonstrates that derelict fishing gear poses a persistent threat to the coral reef ecosystems of the Hawaiian Archipelago.     

Long-term community changes on a high-latitude coral reef in the Greater St Lucia Wetland Park, South Africa

South African coral reefs are limited in size but, being marginal, provide a model for the study of many of the stresses to which these valuable systems are being subjected globally. Soft coral cover, comprising relatively few species, exceeds that of scleractinians over much of the reefs. The coral communities nevertheless attain a high biodiversity at this latitude on the East African coast. A long-term monitoring programme was initiated in 1993, entailing temperature logging and image analysis of high resolution photographs of fixed quadrats on representative reef. Sea temperatures rose by 0.15 degrees C p.a. at the site up to 2000 but have subsequently been decreasing by 0.07 degrees C p.a. Insignificant bleaching was encountered in the region during the 1998 El Nino Southern Oscillation (ENSO) event, unlike elsewhere in East Africa, but quantifiable bleaching occurred during an extended period of warming in 2000. Peak temperatures on the South African reefs thus appear to have attained the coral bleaching threshold. While this has resulted in relatively little bleaching thus far, the increased temperatures appear to have had a deleterious effect on coral recruitment success as other anthropogenic influences on the reefs are minimal. Recruitment success diminished remarkably up to 2004 but appears again to be improving. Throughout, the corals have also manifested changes in community structure, involving an increase in hard coral cover and reduction in that of soft corals, resulting in a 5.5% drop in overall coral cover. These "silent" effects of temperature increase do not appear to have been reported elsewhere in the literature.     

Assessing coral reef health across onshore to offshore stress gradients in the US Virgin Islands

Managing the effects of anthropogenic disturbance on coral reefs is highly dependant on effective strategies to assess degradation and recovery. We used five years of field data in the US Virgin Islands to investigate coral reef response to a potential gradient of stress. We found that the prevalence of old partial mortality, bleaching, and all forms of coral health impairment (a novel category) increased with nearshore anthropogenic processes, such as a five-fold higher rate of clay and silt sedimentation. Other patterns of coral health, such as recent partial mortality, other diseases, and benthic cover, did not respond to this potential gradient of stress or their response could not be resolved at the frequency or scale of monitoring. We suggest that persistent signs of disturbance are more useful to short-term, non-intensive (annual) coral reef assessments, but more intensive (semi-annual) assessments are necessary to resolve patterns of transient signs of coral health impairment.     

Habitat selection by marine larvae in changing chemical environments

The replenishment and persistence of marine species is contingent on dispersing larvae locating suitable habitat and surviving to a reproductive stage. Pelagic larvae rely on environmental cues to make behavioural decisions with chemical information being important for habitat selection at settlement. We explored the sensory world of crustaceans and fishes focusing on the impact anthropogenic alterations (ocean acidification, red soil, pesticide) have on conspecific chemical signals used by larvae for habitat selection. Crustacean (Stenopus hispidus) and fish (Chromis viridis) larvae recognized their conspecifics via chemical signals under control conditions. In the presence of acidified water, red soil or pesticide, the ability of larvae to chemically recognize conspecific cues was altered. Our study highlights that recruitment potential on coral reefs may decrease due to anthropogenic stressors. If so, populations of fishes and crustaceans will continue their rapid decline; larval recruitment will not replace and sustain the adult populations on degraded reefs.     

Temporal distributions of anthropogenic Al,Zn and Pb in Hong Kong Porites coral during the last two centuries

A 182-year long record of trace metal concentrations of aluminum, zinc and lead was reconstructed from a massive Porites coral skeleton from southeastern Hong Kong to evaluate the impacts of anthropogenic activity on the marine environment. Zn/Ca and Pb/Ca ratios fluctuate synchronously from the early 19th century to the present, indicating that the marine environment has been anthropogenically influenced since industrialization. Additionally, land reclamation, mining, and ship building activities are recorded by elevated Al/Ca ratios from 1900 to 1950. The coral record indicates that high levels of Zn, Pb and Al occur coincidentally with local wars, and may have contributed to partial colony mortality. Pb/Ca does not correlate well with hemispheric proxy records after 1950, indicating that coastal corals may be recording local rather than hemispheric contamination. Pb/Ca levels in Hong Kong, Guangdong and Hainan corals imply a continuous supply of Pb-based contamination to southern China not reflected in hemispheric signals.     

Environmental impacts of dredging and other sediment disturbances on corals: A review

A review of published literature on the sensitivity of corals to turbidity and sedimentation is presented, with an emphasis on the effects of dredging. The risks and severity of impact from dredging (and other sediment disturbances) on corals are primarily related to the intensity, duration and frequency of exposure to increased turbidity and sedimentation. The sensitivity of a coral reef to dredging impacts and its ability to recover depend on the antecedent ecological conditions of the reef, its resilience and the ambient conditions normally experienced. Effects of sediment stress have so far been investigated in 89 coral species (～10% of all known reef-building corals). Results of these investigations have provided a generic understanding of tolerance levels, response mechanisms, adaptations and threshold levels of corals to the effects of natural and anthropogenic sediment disturbances. Coral polyps undergo stress from high suspended-sediment concentrations and the subsequent effects on light attenuation which affect their algal symbionts. Minimum light requirements of corals range from <1% to as much as 60% of surface irradiance. Reported tolerance limits of coral reef systems for chronic suspended-sediment concentrations range from <10mgL(-1) in pristine offshore reef areas to >100mgL(-1) in marginal nearshore reefs. Some individual coral species can tolerate short-term exposure (days) to suspended-sediment concentrations as high as 1000mgL(-1) while others show mortality after exposure (weeks) to concentrations as low as 30mgL(-1). The duration that corals can survive high turbidities ranges from several days (sensitive species) to at least 5-6weeks (tolerant species). Increased sedimentation can cause smothering and burial of coral polyps, shading, tissue necrosis and population explosions of bacteria in coral mucus. Fine sediments tend to have greater effects on corals than coarse sediments. Turbidity and sedimentation also reduce the recruitment, survival and settlement of coral larvae. Maximum sedimentation rates that can be tolerated by different corals range from <10mgcm(-2)d(-1) to >400mgcm(-2)d(-1). The durations that corals can survive high sedimentation rates range from <24h for sensitive species to a few weeks (>4weeks of high sedimentation or >14days complete burial) for very tolerant species. Hypotheses to explain substantial differences in sensitivity between different coral species include the growth form of coral colonies and the size of the coral polyp or calyx. The validity of these hypotheses was tested on the basis of 77 published studies on the effects of turbidity and sedimentation on 89 coral species. The results of this analysis reveal a significant relationship of coral sensitivity to turbidity and sedimentation with growth form, but not with calyx size. Some of the variation in sensitivities reported in the literature may have been caused by differences in the type and particle size of sediments applied in experiments. The ability of many corals (in varying degrees) to actively reject sediment through polyp inflation, mucus production, ciliary and tentacular action (at considerable energetic cost), as well as intraspecific morphological variation and the mobility of free-living mushroom corals, further contribute to the observed differences. Given the wide range of sensitivity levels among coral species and in baseline water quality conditions among reefs, meaningful criteria to limit the extent and turbidity of dredging plumes and their effects on corals will always require site-specific evaluations, taking into account the species assemblage present at the site and the natural variability of local background turbidity and sedimentation.     

Modeling patterns of coral bleaching at a remote Central Pacific atoll

A mild bleaching event (9.2% prevalence) at Palmyra Atoll occurred in response to the 2009 ENSO, when mean water temperature reached 29.8-30.1 °C. Prevalence among both abundant and sparse taxa varied with no clear pattern in susceptibility relating to coral morphology. Seven taxon-specific models showed that turbidity exacerbated while prior exposure to higher background temperatures alleviated bleaching, with these predictors explaining an average 16.3% and 11.5% variation in prevalence patterns, respectively. Positive associations occurred between bleaching prevalence and both immediate temperature during the bleaching event (average 8.4% variation explained) and increased sand cover (average 3.7%). Despite these associations, mean unexplained variation in prevalence equalled 59%. Lower bleaching prevalence in areas experiencing higher background temperatures suggests acclimation to temperature stress among several coral genera, while WWII modifications may still be impacting the reefs via shoreline sediment re-distribution and increased turbidity, exacerbating coral bleaching susceptibility during periods of high temperature stress.     

Historical and ecological analysis of coral communities in Castle Harbour (Bermuda) after more than a century of environmental perturbation

The coral reefs in Bermuda's Castle Harbour basin have been subjected to varying anthropogenic stressors for over 100 years. These include restriction of water flow through the construction of a causeway in the late 19th century and an extensive dredging and land reclamation operation during World War II. In the 1970s, disposal of bulk waste commenced at a foreshore reclamation site in Castle Harbour. Since 1996 the waste stream has included blocks of cement-stabilized municipal incinerator ash. This study provides a historical and quantitative ecological review of the Castle Habour reef ecosystem as a case study, assessing the responses of the reef to more than a century of anthropogenic disturbance. Measures of the coral community, flow rates, turbidity and sedimentary regimes suggest the present structure of the coral community largely reflects the impacts of the historic dredge and fill operations prior to the establishment of the foreshore dump site. Recent increases in the abundance of some sediment tolerant, massive reef-building coral species (Diploria strigosa and Montastraea cavernosa) suggest adaptation to chronic sediment stress.     

Baseline study of the spatio-temporal patterns of reef fish assemblages prior to a major mining project in New Caledonia (South Pacific)

From 2008 onwards, the coral reefs of Koné (New Caledonia) will be subjected to a major anthropogenic perturbation linked to development of a nickel mine. Dredging and sediment runoff may directly damage the reef environment whereas job creation should generate a large demographic increase and thus a rise in fishing activities. This study analyzed reef fish assemblages between 2002 and 2007 with a focus on spatio-temporal variability. Our results indicate strong spatial structure of fish assemblages through time. Total species richness, density and biomass were highly variable between years but temporal variations were consistent among biotopes. A remarkable spatio-temporal stability was observed for trophic (mean 4.6% piscivores, 53.1% carnivores, 30.8% herbivores and 11.4% planktivores) and home range structures of species abundance contributions. These results are discussed and compared with others sites of the South Pacific. For monitoring perspectives, some indicators related to expected disturbances are proposed.     

Conservation management options and actions: Putative decline of coral cover at Palmyra Atoll,Northern Line Islands,as a case study

Localised loss of live coral cover at Palmyra Atoll (central Pacific Ocean) has been attributed to increased temperature and/or sedimentation arising from alterations made to the lagoon system. It has been hypothesised that a causeway spanning the lagoon hinders water circulation, resulting in warmer and/or more turbid water flowing towards a site of high coral cover and diversity (Coral Gardens). Analyses of a multi-site and multi-year data set revealed no differences in mean temperature or turbidity values on either side of the causeway and provided no evidence of significantly warmer or more turbid water at Coral Gardens. We conclude that the putative decline in live coral cover cannot be attributed to the presence of the causeway and that proposed management actions involving modification to the causeway cannot achieve the conservation outcomes suggested of them.     

Metal contents in Porites corals: Anthropogenic input of river run-off into a coral reef from an urbanized area, Okinawa

In order to monitor pollutants from urban areas to coral reefs, metal contents in Porites coral samples collected from the Hija River mouth and at nearby sites from the estuary were analyzed. The corals were cleaned by oxidative and reductive treatments to effectively eliminate detritus and organic materials. Metal-to-calcium (Me/Ca) ratios in the samples were determined by ICP-MS. Filtered samples of river water were also measured similarly for metal concentrations. The extent of anthropogenic contribution by riverine input was assessed by comparing the Me/Ca values in corals to those of Rukan-sho, an unpolluted coral reef. High riverine inputs of Mn, Cd, Zn and Ag were observed from Me/Ca values in the coral samples. Manganese in the coral samples showed strong dependence on salinity, varying inversely to the distance from terrestrial sources. Considering a lead background of 25.0 nmol/mol measured in the Rukan-sho corals, Pb/Ca in corals of the Hija River estuary that are two and three times higher may indicate lead enrichment in the river mouth. Because Pb is only moderately high in the Hija River water compared to its concentration in surface seawater, lead may have accumulated in the estuarine water and sediments, resulting in an elevated concentration of lead available for coral uptake.     

The Ba/Ca record of corals from the Southern Gulf of Mexico: Contributions from land-use changes, fluvial discharge and oil-drilling muds

The Ba/Ca in the growth bands of Montastraea faveolata from the Veracruz Reef System was used to reconstruct the long-term environmental change associated to anthropogenic activity in the Southern Gulf of Mexico (SGM). The 168-yr coral record shows two periods of distinct Ba concentrations: a pre-industrial period (1835-1965: 7.54 μmol/mol) followed by an industrial one (1966-2000: 8.57 μmol/mol). As human population quadrupoled during the latter, sediment load in the fluvial discharge also increased due to changes in land-use, yielding a 14% increase in the Ba-levels. A remarkable finding is that the periods at which the coral Ba/Ca ratio losses its correlation with fluvial discharge coincide exactly with peak periods of high barite consumption (used for oil drilling) in the Northern Gulf of Mexico, and the onset of oil drilling in the SGM. This finding suggests that barite may be one of the dominant sources for dissolved-Ba in the SGM.     

Impacts of human activities on coral reef ecosystems of southern Taiwan: a long-term study

In July 2001, the National Museum of Marine Biology and Aquarium, co-sponsored by the Kenting National Park Headquarters and Taiwan's National Science Council, launched a Long-Term Ecological Research (LTER) program to monitor anthropogenic impacts on the ecosystems of southern Taiwan, specifically the coral reefs of Kenting National Park (KNP), which are facing an increasing amount of anthropogenic pressure. We found that the seawater of the reef flats along Nanwan Bay, Taiwan's southernmost embayment, was polluted by sewage discharge at certain monitoring stations. Furthermore, the consequently higher nutrient and suspended sediment levels had led to algal blooms and sediment smothering of shallow water corals at some sampling sites. Finally, our results show that, in addition to this influx of anthropogenically-derived sewage, increasing tourist numbers are correlated with decreasing shallow water coral cover, highlighting the urgency of a more proactive management plan for KNP's coral reefs.     

Proximate environmental drivers of coral communities at Palmyra Atoll: establishing baselines prior to removing a WWII military causeway

A management proposal aims to partly remove a WWII military causeway at Palmyra Atoll to improve lagoon water circulation and alleviate sedimentation stress on the southeast backreef, an area of high coral cover and diversity. This action could result in a shift in sedimentation across reef sites. To provide management advice, we quantified the proximate environmental factors driving scleractinian coral cover and community patterns at Palmyra. The proportion of fine sedimentation was the optimal predictor of coral cover and changes in community structure, explaining 23.7% and 24.7% of the variation between sites, respectively. Scleractinian coral cover was negatively correlated with increases in fine sedimentation. Removing the causeway could negatively affect the Montipora corals that dominate the western reef terrace, as this genus was negatively correlated with levels of fine sedimentation. The tolerance limits of corals, and sediment re-distribution patterns, should be determined prior to complete removal of the causeway.     

Coral Transplantation: A Useful Management Tool or Misguided Meddling?

The primary objectives of coral transplantation are to improve reef ‘quality' in terms of live coral cover, biodiversity and topographic complexity. Stated reasons for transplanting corals have been to: (1) accelerate reef recovery after ship groundings, (2) replace corals killed by sewage, thermal effluents or other pollutants, (3) save coral communities or locally rare species threatened by pollution, land reclamation or pier construction, (4) accelerate recovery of reefs after damage by Crown-of-thorns starfish or red tides, (5) aid recovery of reefs following dynamite fishing or coral quarrying, (6) mitigate damage caused by tourists engaged in water-based recreational activities, and (7) enhance the attractiveness of underwater habitat in tourism areas. Whether coral transplantation is likely to be effective from a biological standpoint depends on, among other factors, the water quality, exposure, and degree of substrate consolidation of the receiving area. Whether it is necessary (apart from cases related to reason 3 above), depends primarily on whether the receiving area is failing to recruit naturally.

The potential benefits and dis-benefits of coral transplantation are examined in the light of the results of research on both coral transplantation and recruitment with particular reference to a 4.5 year study in the Maldives. We suggest that in general, unless receiving areas are failing to recruit juvenile corals, natural recovery processes are likely to be sufficient in the medium to long term and that transplantation should be viewed as a tool of last resort. We argue that there has been too much focus on transplanting fast-growing branching corals, which in general naturally recruit well but tend to survive transplantation and re-location relatively poorly, to create short-term increases in live coral cover, at the expense of slow-growing massive corals, which generally survive transplantation well but often recruit slowly. In those cases where transplantation is justified, we advocate that a reversed stance, which focuses on early addition of slowly recruiting massive species to the recovering community, rather than a short-term and sometimes short-lived increase in coral cover, may be more appropriate in many cases.     

Converted T Phases Recorded on Hawaii from Polynesian Nuclear Tests: A Preliminary Report

v--vWe present a preliminary study of T waves from Polynesian nuclear tests at Mururoa, recorded on digital stations of the Hawaii Volcano Observatory network, following their conversion to seismic waves at the southern shore of the Island of Hawaii, and subsequent propagation to the recording stations. We show that seismograms are composed of several packets, which can be interpreted as resulting from TMP and TMS conversions, and which feature distinct spectral characteristics. As the distance from the shoreline to the station increases, the relative importance of the several wave packets changes; a prominent shadow for TMP is found at 8-12 km from the shore. This pattern is affected by the local crustal structure; in a favorable case, propagation in deep, low-attenuation layers resulted in a clear record as far as 76 km from the shoreline. While these results are generally robust, they can be moderately affected by a change of location of the source inside Mururoa Atoll.     

Effects of particulate matter released by a fish farm (Eilat,Red Sea) on survival and growth of Stylophora pistillata coral nubbins

This field study aims to determine whether increased levels of organically enriched particulate matter released by net pen fish farms (Eilat, Red Sea) would affect the growth of nubbins taken from the branching coral Stylophora pistillata. We followed the survival and growth of 1322 nubbins pruned from five colonies that were transplanted at a depth of 6 m in the vicinity of the fish cages and in a reference site, in front of the Interuniversity Institute (IUI). Nubbins were attached on U-shaped PVC plates in three orientations (up, vertical and down positions). After 50 days, survival was high in both localities and no difference was recorded between the spatial orientations. At the fish farm, however, burial of the nubbin's lateral growths and partial coverage of nubbins by settled particulate matter resulted in significant reduction of the lateral growth rates of nubbins settled in the up position as compared to the reference site. On the other hand, faster growth rates were recorded in the vertical set of nubbins at the fish farm when compared with the IUI site. These results strengthen the conclusion that physical effects, rather than nutrient enrichment, may constitute the main cause of stress for minute coral fragments (resembling coral recruits) growing near the vicinity of a fish farm.     

Temporal distributions of anthropogenic Al, Zn and Pb in Hong Kong Porites coral during the last two centuries

A 182-year long record of trace metal concentrations of aluminum, zinc and lead was reconstructed from a massive Porites coral skeleton from southeastern Hong Kong to evaluate the impacts of anthropogenic activity on the marine environment. Zn/Ca and Pb/Ca ratios fluctuate synchronously from the early 19th century to the present, indicating that the marine environment has been anthropogenically influenced since industrialization. Additionally, land reclamation, mining, and ship building activities are recorded by elevated Al/Ca ratios from 1900 to 1950. The coral record indicates that high levels of Zn, Pb and Al occur coincidentally with local wars, and may have contributed to partial colony mortality. Pb/Ca does not correlate well with hemispheric proxy records after 1950, indicating that coastal corals may be recording local rather than hemispheric contamination. Pb/Ca levels in Hong Kong, Guangdong and Hainan corals imply a continuous supply of Pb-based contamination to southern China not reflected in hemispheric signals.