Testing for Sediment Acidification Effects on Within-Season Variability in Juvenile Soft-Shell Clam (<Emphasis Type="Italic">Mya arenaria</Emphasis>) Abundance on the Northern Shore of the Bay of Fundy

Soft-shell clams (Mya arenaria) can serve important ecological roles in intertidal mudflats and are an important economic and recreational resource in the northwestern Atlantic. However, environmental factors affecting newly-settled and juvenile clam abundances within a given settlement season remain uncertain. We conducted a field study assessing relationships between juvenile soft-shell clam abundance and spatial, temporal, and environmental variables in coastal mudflats of the northern shore of the Bay of Fundy. Sediment pH and low-tide water temperature (tide pools) were monitored in situ on a biweekly–monthly basis over the course of the M. arenaria settlement season in 2012 at four study sites to quantify diel variation in sediment pH and temperature. Core samples were also collected to quantify M. arenaria (<6 mm) abundance. Sea-surface and air temperature, and in situ sediment pH and water temperature were then used to predict clam abundance. Sediment pH was spatially and temporally variable, while in situ temperature was stable and declined over the sampling season. Akaike’s information criterion model selection indicated that models incorporating site, date, and air temperature best predicted 2012 recruitment patterns in linear models when all variables were included. When only environmental variables were included, the best linear model included minimum air temperature and sediment pH. When data were averaged across dates for each site to remove potential temporal effects, mean clam abundance displayed a significant positive relationship with sediment pH and sediment grain size, but not minimum air temperature. The results of this study suggest that sediment pH and/or sediment grain size may influence within-season juvenile soft-shell clam abundances across mudflats in the Bay of Fundy. Field experiments at the same (or similar) sites are now needed to confirm the mechanism driving the observed relationships.     

Post-settlement alteration of spatial patterns of soft shell clam (<Emphasis Type="Italic">Mya arenaria</Emphasis>) recruits

To examine the roles of settlement and early post-settlement processes in patterns of recruitment of the soft shell clamMya arenaria, abundance of juvenileMya at three intertidal sites in Barnstable Harbor, Massachusetts, was monitored over two settlement seasons. Two peaks of settlement occurred in 1998 (July and September) and one peak was recorded in June 1999, indicating that a late season settlement event is not a consistent feature at this site. Abundance of recent settlers (i.e., early recruits, < 1 week past settlement) varied significantly among the tidal flats (sites) that were separated by hundreds of meters to kilometers, but not among plots meters apart. Differences in abundance of settlers likely resulted in these differences in early-recruit abundance among sites. Settlement was greatest at the site with the greatest variability in flow speed. Sites also differed to some extent in their sediment characteristics and macrofaunal assemblages, which may influence larval substrate choice. Between-site differences in abundance ofMya decreased after settlement. The rate of decline of abundance varied among cohorts and sites. Comparison of abundance of recent settlers (up to 145,000 m⁻²) to that of juveniles > 3-mm shell length at the end of the settlement season (up to 60 m⁻²) indicated large losses of individuals during the early post-settlement period. This study demonstrates that spatial patterns inMya abundance can change substantially during the early post-settlement period, and that high mortality rates can result in cohorts contributing little to the population size even when rates of settlement are high.     

Foraging by Two Estuarine Fishes, <Emphasis Type="Italic">Fundulus heteroclitus</Emphasis> and <Emphasis Type="Italic">Fundulus majalis</Emphasis>, on Juvenile Asian Shore Crabs (<Emphasis Type="Italic">Hemigrapsus sanguineus</Emphasis>) in Western Long Island Sound

The Asian shore crab, Hemigrapsus sanguineus, is a recent and particularly successful introduction to the east coast of the USA. Little research has been done on the utilization of Asian shore crabs for food by native species, a potential form of biocontrol. Over a 4-year period, we examined the gut contents of cogeners, Fundulus heteroclitus and Fundulus majalis, collected from two embayments in western Long Island Sound for the presence of juvenile H. sanguineus. Frequency (percent) of occurrence of food items in the guts of both species varied over year and study site. Asian shore crabs were consumed more often by F. heteroclitus than by F. majalis, but predation pressure by both species was low. Only 13% of F. heteroclitus and 7.7% of F. majalis found with food in their guts had ingested Asian shore crab remains. Of those, 1/3 had consumed whole crabs; the rest had only autotomized appendages in their guts. The mean carapace width of juvenile Asian shore crabs ingested by F. heteroclitus was 3.59 ± 2.22 mm (N = 33). Results of our study on killifish predation support the hypothesis that H. sanguienus abundance is partly explained by reduced impact of native predators (i.e., the “enemy release hypothesis”). Predation pressure of other potential enemies on both planktonic and benthic stages of the Asian shore crab must be investigated, however, to understand the full impact of predation on H. sanguineus population dynamics.     

Toxicity effects of four typical nanomaterials on the growth of <Emphasis Type="Italic">Escherichia coli</Emphasis>, <Emphasis Type="Italic">Bacillus subtilis</Emphasis> and <Emphasis Type="Italic">Agrobacterium tumefaciens</Emphasis>

To offer an insight into the toxicity of nanomaterials (NM) on the growth of bacteria, Escherichia coli (E. coli), Bacillus subtilis (B. subtilis) and Agrobacterium tumefaciens (A. tumefaciens) were exposed to nano-Au, nano-Ag, nano-Fe and fullerene (C₆₀) in this study. As an effective bactericide, nano-Ag induced high toxicity on these three bacteria; C₆₀ could inhibit their growth; however, B. subtilis and E. coli could recover as exposure time extended. Nano-Au and nano-Fe had hardly any effect on three bacteria. A. tumefaciens showed the lowest resistance and slowest growth rate during exposure. Images obtained by scanning electron microscope (SEM) revealed that nano-Ag could cause damage to the cell structure of three bacteria at 1 μg/mL. Slight damage on E. coli was found when exposed to C₆₀, whereas no obvious physical damage was found after exposure to nano-Au or nano-Fe. It is assumed that surface activities of NM might be responsible for the different toxic effects on these bacteria.     

<Emphasis Type="Italic">An </Emphasis><Emphasis Type="Italic">Inconvenient Truth</Emphasis>: a focus on its portrayal of the hydrologic cycle

An Inconvenient Truth (AIT) has earned Al Gore an Oscar and a share of the 2007 Nobel Peace Prize and has been widely acclaimed by the mass media. However, significant errors exist in the film, owing to alarmism and exaggeration. As this forum does not provide for a detailed examination of these errors, this paper will focus only on the portrayal of the hydrologic cycle by AIT—precipitation and floods, soil moisture and droughts, and storminess. AIT argues that precipitation and intense rainfalls, floods, droughts, and the total number, intensity, and duration of tropical cyclones have all increased due exclusively to anthropogenically-driven climate change; indeed, AIT paints a picture of near scientific certainty with an overwhelming bias toward catastrophe scenarios. A closer look at the science, however, reveals that the data do not support these claims and that the scientific community is divided as to what the impact of anthropogenic climate change on the hydrologic cycle will be. Thus, the film gives a false impression of both the current state of climate change and that ‘the science is settled’.

New thermoelastic parameters of natural <Emphasis Type="Italic">C</Emphasis>2/<Emphasis Type="Italic">c</Emphasis> omphacite

The compressibility at room temperature and the thermal expansion at room pressure of two disordered crystals (space group C2/c) obtained by annealing a natural omphacite sample (space group P2/n) of composition close to Jd₅₆Di₄₄ and Jd₅₅Di₄₅, respectively, have been studied by single-crystal X-ray diffraction. Using a Birch–Murnaghan equation of state truncated at the third order [BM3-EoS], we have obtained the following coefficients: V ₀ = 421.04(7) Å³, K _T0 = 119(2) GPa, K′ = 5.7(6). A parameterized form of the BM3 EoS was used to determine the axial moduli of a, b and c. The anisotropy scheme is β _c  ≤ β _a  ≤ β _b , with an anisotropy ratio 1.05:1.00:1.07. A fitting of the lattice variation as a function of temperature, allowing for linear dependency of the thermal expansion coefficient on the temperature, yielded α_V(1bar,303K) = 2.64(2) × 10⁻⁵ K⁻¹ and an axial thermal expansion anisotropy of α _b  ≫ α _a  > α _c . Comparison of our results with available data on compressibility and thermal expansion shows that while a reasonable ideal behaviour can be proposed for the compressibility of clinopyroxenes in the jadeite–diopside binary join [K _T0 as a function of Jd molar %: K _T0 = 106(1) GPa + 0.28(2) × Jd_(mol%)], the available data have not sufficient quality to extract the behaviour of thermal expansion for the same binary join in terms of composition.     

Ecophysiology of the Olympia Oyster, <Emphasis Type="Italic">Ostrea lurida</Emphasis>, and Pacific Oyster, <Emphasis Type="Italic">Crassostrea gigas</Emphasis>

The native Olympia oyster, Ostrea lurida, was once abundant in many US Pacific Northwest (PNW) estuaries, but was decimated by human activity in the late nineteenth early to twentieth centuries. Having been the subject of only few modern, detailed studies, a dearth of basic physiological information surrounded O. lurida and how it compared to the now dominant, non-native Pacific oyster, Crassostrea gigas. Utilizing laboratory and in situ studies in Yaquina Bay, OR, we explored the clearance rates of both species across a wide range of conditions. Pacific oysters not only had greater size-specific clearance rates than Olympia oysters, but also had a lower optimum temperature. Clearance rates for both species were reduced at lower salinity, at lower organic content, and at higher turbidity. Clearance rate models were constructed for each species using three approaches: (1) a single mechanistic model that incorporated feeding response functions of each species to the effects of temperature, salinity, turbidity, and seston organic content based on laboratory studies; (2) another additive model in which the number and type of response functions from laboratory studies were allowed to vary; and (3) a statistical model that utilized environmental data collected during in situ feeding trials. Clearance rate models that correlated feeding activity with in situ environmental data were found to often better predict oyster clearance rates (based on Adj R ²) for both species in Yaquina Bay, OR, than mechanistic, additive models based on laboratory feeding response functions; however, in situ correlative models varied in accuracy by species and season. This work represents important first steps towards better understanding the physiological ecology of the native Olympia oyster and how it differs from introduced and now dominant Pacific oyster.     

<Emphasis Type="Italic">BV I</Emphasis><Subscript><Emphasis Type="Italic">c</Emphasis></Subscript> photometry of RR Lyrae stars

We have obtained 26 372 CCD frames in the B, V, and I _c filters for 81 RR Lyrae stars in 2008–2010, using the 76-cm telescope of the South African Astronomical Observatory and the 40-cm telescope of the Cerro Armazones Observatory, North Catholic University (Chile) using an SBIG ST-10XME CCD camera. For 12 of these RR Lyrae stars, we also obtained 337 brightness measurements in the B and V bands in 2000–2001 using the 60-cm telescope of the High Altitude Mt. Maidanak Observatory (Republic of Uzbekistan). We present tables of observations, light curves, and improved light-curve elements for all these RR Lyrae stars. The Blazhko effect was detected for SU Hor.     

Utilization of <Emphasis Type="Italic">Spartina</Emphasis>- and <Emphasis Type="Italic">Phragmites</Emphasis>-Derived Dissolved Organic Matter by Bacteria and Ribbed Mussels (<Emphasis Type="Italic">Geukensia demissa</Emphasis>) from Delaware Bay Salt Marshes

Phragmites australis has been invading Spartina-alterniflora-dominated salt marshes throughout the mid-Atlantic. Although, Phragmites has high rates of primary production, it is not known whether this species supports lower trophic levels of a marsh food web in the same manner as Spartina. Using several related photochemical and biological assays, we compared patterns of organic matter flow of plant primary production through a key salt marsh metazoan, the ribbed mussel (Geukensia demissa), using a bacterial intermediate. Dissolved organic matter (DOM) was derived from plants collected from a Delaware Bay salt marsh and grown in the laboratory with ¹⁴C-CO₂. Bacterial utilization of plant-derived DOM measured as carbon mineralization revealed that both species provided bioavailable DOM to native salt marsh bacteria. Total carbon mineralization after 19 days was higher for Spartina treatments (36% ¹⁴CO₂ ± 3 SE) compared with Phragmites treatments (29% ±2 SE; Wilcoxon–Kruskal–Wallis rank sums test, P < 0.01). Pre-exposing DOM to natural sunlight only enhanced or decreased bioavailability of the DOM to the bacterioplankton during initial measurements (e.g., 7 days or less) but these differences were not significant over the course of the incubations. Mixtures of ¹⁴C-labeled bacterioplankton (and possibly organic flocs) from ¹⁴C-DOM treatments were cleared by G. demissa at similar rates between Spartina and Phragmites treatments. Moreover, ¹⁴C assimilation efficiencies for material ingested by mussels were high for both plant sources ranging from 74% to 90% and not significantly different between plant sources. Sunlight exposure did not affect the nutritional value of the bacterioplankton DOM assemblage for mussels. There are many possible trophic and habitat differences between Spartina- and Phragmites-dominated marshes that could affect G. demissa but the fate of vascular plant dissolved organic carbon in the DOM to bacterioplankton to mussel trophic pathway appears comparable between these marsh types.     

Feeding Behavior of the Native Mussel <Emphasis Type="Italic">Ischadium recurvum</Emphasis> and the Invasive Mussels <Emphasis Type="Italic">Mytella charruana</Emphasis> and <Emphasis Type="Italic">Perna viridis</Emphasis> in FL,USA, Across a Salinity Gradient

The feeding behavior of three species of mussels, the native Ischadium recurvum and the invasives Mytella charruana and Perna viridis, was studied in an invaded ecosystem in Florida (USA). In situ feeding experiments using the biodeposition method were performed along a salinity gradient in four different locations along the St. Johns River. Water characteristics, such as salinity, temperature, dissolved oxygen, and seston loads, were recorded to identify relationships between these variables and the feeding behavior of the mussels. Feeding behavior of the species varied by study site. Clearance, filtration, organic ingestion, and absorption rates of I. recurvum were negatively affected by salinity. For the invasive mussel, M. charruana, rejection was positively related to salinity while total ingestion, organic ingestion, and absorption rates were positively related to the percentage of organic matter in the seston. For P. viridis, total and organic ingestion rates were negatively affected by salinity but positively affected by total particulate matter. Condition indices for P. viridis and M. charruana were 13.16?±?0.64 and 6.63?±?0.43, respectively, compared to 4.82?±?0.41 for the native species I. recurvum, indicating that these mussels are well adapted to the environmental conditions in the area. This study indicates that the three species have different preferred habitats because of their specific responses to water characteristics. Thus, the invasive mussels will not totally occupy the niche of the native mussel in Florida despite overlapping zones. These data may help identify potential invaded areas and understand the extent of the invasion.     

Toxicity of vegetable tannin extract from <Emphasis Type="Italic">Acacia mearnsii</Emphasis> in <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis>

Vegetable tannins are complex polyphenols, which occur widely in nature. Traditionally, natural tannins have been used for tanning leather. In Brazil, the main tannin-based products are obtained from Acacia mearnsii, which is a leguminous tree native to Southeastern of Australia, and the first seeds were brought to Brazil in 1928. The main cultivation of acacia was established in Rio Grande do Sul state due to the possibility of raw material for charcoal, adhesives to fuel and for tanning leather. The leather tanning processes based on plant tannins are thought to be less harmful than chromium-based tanning, and it has been used as a sustainable alternative. However, there is scarce information about the environmental impact of the leather tanning processes, with most studies reporting inhibitory effects against microorganisms at high doses and stimulatory and positive health effects at low concentrations. The aim of this study was to evaluate the toxicity of tannin preparations extracted from A. mearnsii in Saccharomyces cerevisiae. Vegetable tannin toxicity in yeast was tested using two tannin treatments in different concentrations. In general, the results showed toxicity of vegetable in yeast, BY4741 and gsh1Δ strains.     

The Intertidal Burrowing Crab <Emphasis Type="Italic">Neohelice</Emphasis> (=<Emphasis Type="Italic">Chasmagnathus</Emphasis>) <Emphasis Type="Italic">granulata</Emphasis> Positively Affects Foraging of Rodents in South Western Atlantic Salt Marshes

The role of positive and indirect interactions is often crucial in communities with intense abiotic stress such as salt marshes. The burrowing crab, Neohelice (=Chasmagnathus) granulata, is the dominant benthic macroinvertebrate of southwest Atlantic marshes (southern Brazil to Northern Argentinean Patagonia), having strong direct and indirect effects on marsh soil and, in consequence, on marsh vegetation and primary consumers. In this work, we investigate if this crab indirectly modifies habitat use by the granivorous rodents, Akodon azarae and Oligoryzomys flavescens, by increasing nutrient availability and thus enhancing seed production by the marsh plant Spartina densiflora. The study was conducted at the Mar Chiquita Coastal Lagoon, Argentina (37°32′ S). Rodent frequencies in S. densiflora were positively correlated with crab densities throughout the low and middle marsh. Additionally, the highest quality of S. densiflora and inflorescence density was recorded at the highest crab densities. Experimental manipulation of crab densities shows that N. granulata indirectly enhances the performance of S. densiflora (e.g., decreased fiber content and C/N ratios) and increases density of seeds. Moreover, N. granulata also facilitates S. densiflora seed availability to rodents by concentrating them in sediment mound at their burrows entrances. Experimental rodent exclusions showed that rodent species used S. densiflora seeds, a variable positively related to crab burrow density. Thus, our results show that N. granulata drives the granivorous rodent distribution and the intensity of seeds–rodent interaction trough facilitative and indirect interactions in marsh community.     

Physiological Constraints in Juvenile <Emphasis Type="Italic">Ostrea chilensis</Emphasis> Fed the Toxic Dinoflagellate <Emphasis Type="Italic">Alexandrium catenella</Emphasis>

Frequent blooms of the dinoflagellate Alexandrium catenella in southern Chile encouraged undertaking the present study which uses the oyster Ostrea chilensis as a model for evaluating the feeding, growth, lipid storage and mortality responses to diets containing paralytic shellfish poisoning (PSP) produced by A. catenella. Medium-term (30 days) physiological responses of two groups of juvenile oysters were measured every 10 days. Five replicates were exposed to diets containing A. catenella and other five replicates were fed with a diet containing the non-toxic algae Isochrysis galbana. Diets were continuously supplied at a concentration of 2 mg L^?1, in which the feeding and metabolic activity was measured, and the scope for growth calculated. Lipids storage, actual growth and mortality were also measured every 10 days. The results showed that the toxic diet has dramatic negative effects on feeding and metabolism of the juvenile individuals of O. chilensis, with high reduction of the lipid storage and growth. Mortality was also increased in individuals fed with the contaminated diet. This study supports the conclusion that the toxic dinoflagellate A. catenella restricts the energy acquisition in the juvenile O. chilensis, an important fishery and aquaculture resource in southern Chile.     

A Half Century Assessment of Hard Clam, <Emphasis Type="Italic">Mercenaria mercenaria</Emphasis>, Growth in Narragansett Bay,Rhode Island

During the last several decades, the waters of mid Narragansett Bay, Rhode Island have increased in temperature and decreased in chlorophyll concentration, and it is possible that these changes affected the growth and success of a common benthic filter feeder, the hard clam, Mercenaria mercenaria. We determined recent hard clam growth rates through a sclerochronological analysis and compared them to the rich historical record of Narragansett Bay growth rates in order to understand how these opposing changes influenced hard clam growth. We found no significant differences in short-term growth between 1985 and 2000. Long-term juvenile growth showed a significant decrease between the 1960s and 1990s, while long-term adult (mature) growth showed a significant increase over this same time period. While it is not clear why the changes in juvenile and adult growth rates differ, it appears as though the decrease in chlorophyll concentration, together with a change in phytoplankton community composition, increasing water temperature, and an increase in predator abundance, may all have influenced hard clam growth between the 1960s and the 1990s.     

Evaluation of <Emphasis Type="Italic">smtA</Emphasis> expression and <Emphasis Type="Italic">E. coli</Emphasis> survival against cadmium ions

Cadmium and other heavy metals lead to environmental danger, and these heavy metals are a great threat to human and other animal’s health. Investigation of the relationship between survival of E. coli and metallothionein smtA gene expression against cadmium ion is the goal of this research. Survival of recombinant bacteria containing smtA gene was analyzed against various concentrations of cadmium chloride salt using optical density (OD). At the resistive range, recombinant bacteria were subjected to different treatments. At the logarithmic phase of bacterial growth, sampling, RNA extraction and cDNA synthesis were performed and smtA gene expression was then analyzed by real-time PCR using designed primers for smtA gene and Amp resistance (as the calibrator gene). Relative gene expression was calculated using the ??C_t method. The resistive range against cadmium chloride was 0.5–0.7 mM (minimum inhibitory concentration (MIC = 0.5 mM)). Survival and gene expression analysis showed that in induced bacteria, smtA expression was increased significantly that in turn conferred resistance to cadmium chloride prominently. There was a direct relationship between increased smtA gene expression and survival of the recombinant bacteria. Therefore, our result may help to confront to cadmium metal environmental pollution using overexpression of smtA gene expression in recombinant bacteria.     

Estimation of aseismic crustal-strain using radon precursors of the 2003 <Emphasis Type="Italic">M</Emphasis> 6.8, 2006 <Emphasis Type="Italic">M</Emphasis> 6.1, and 2008 <Emphasis Type="Italic">M</Emphasis> 5.0 earthquakes in eastern Taiwan

Aseismic crustal-strain signals prior to the 2003 Mw 6.8 Chengkung, 2006 Mw 6.1 Taitung, and 2008 Mw 5.0 Antung earthquakes with epicenters located 20, 55 and 11 km, respectively, from the Antung radon-monitoring station have been calculated using the radon anomalies recorded. Specifically, radon decreased from background levels of 791 ± 46, 762 ± 57, and 735 ± 48 pCi/L to minima of 326 ± 9, 371 ± 9, and 480 ± 43 pCi/L prior to the 2003, 2006, and 2008 earthquakes, respectively. The estimated aseismic crustal-strain maxima at the Antung hot spring during the rock dilation stage were 3.6, 2.7, and 1.3 ppm, respectively. The v-shaped radon pattern recognized in all three anomalies is valuable for detecting the aseismic strain precursory to disastrous earthquakes in the Antung hot spring which is situated in a brittle fractured aquifer of limited recharge surrounded by ductile mudstone.     

Toxinogenicity and cytotoxicity of <Emphasis Type="Italic">Alternaria,Aspergillus</Emphasis> and <Emphasis Type="Italic">Penicillium</Emphasis> moulds isolated from working environments

There is currently limited research available on the secondary metabolites of moulds in workplaces. The aim of this study was to determine the mould contamination in museums (N = 4), composting plants (N = 4) and tanneries (N = 4) and the secondary metabolite profiles of Alternaria, Aspergillus and Penicillium isolates from these workplaces. Alternaria, Aspergillus and Penicillium species were identified using the ITS1/2 sequence of the rDNA region. Mould metabolites were quantitatively analysed on standard laboratory medium and mineral medium containing materials specific to each workplace using liquid chromatography-mass spectrometry. We also examined the cytotoxicity of the moulds using MTT (3-(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide) assays. Air microbiological contamination analyses showed a number of microorganisms, ranging from 2.4 × 10³ CFU m^?3 (composting plants) to 6.8 × 10⁴ CFU m^?3 (tanneries). We identified high percentages of Alternaria, Aspergillus and Penicillium moulds (air 57–59%, surfaces 10–65%) in all workplaces. The following moulds were the most cytotoxic (>90%): Alternaria alternata, A. limoniasperae, Aspergillus flavus, Penicillium biourgeianum, P. commune and P. spinulosum. The same mould species isolated from different working environments exhibited varying toxigenic and cytotoxic properties. Modifying the culture medium to simulate environmental conditions most often resulted in the inhibition of secondary metabolite production. Moulds isolated from the working environments produced the following mycotoxins (ng g^?1): chanoclavines (0.28–204), cyclopiazonic acid (27.1–1045), fumigaclavines (0.33–10,640,000), meleagrin (0.57–13,393), roquefortins (0.01–16,660), rugulovasines (112–220), viridicatin (0.12–957), viridicatol (4.23–2753) and quinocitrinines (0.07–1104), which may have a negative impact on human health.