Preserved lignin structures in early eocene Surat lignites,Cambay Basin,Western India

Lignite samples from Vastan and Tadkeshwar lignite mines, Cambay Basin have been analysed to elucidate lignin precursor using thermochemolysis-gas chromatography-mass spectrometry. The thermochemolysis products of lignites are characterized by monomethoxy-, dimethoxy-, and trimethoxybenzene derivatives originated from p-hydroxyphenyl, guaiacyl, and syringyl units of lignin polymer, respectively. The other compounds obtained in thermochemolysates of studied lignites are some resin derived C₁₅ sesquiterpenoids, with a series of fatty acid methyl esters and n-alkanes/alkenes. The methylated guaiacyl and syringyl derivatives originate from the cleavage of β-O-4 linkages and subsequent methylation of acidic hydroxyl groups of preserved lignin. Gymnosperm lignin is characterized mainly by guaiacyl derivatives whereas angiosperm lignin yields some syringyl-type compounds in addition to guaiacyl-type compounds. By analogy with the lignin structure of modern trees, the abundant occurrences of syringyl derivatives in the thermochemolysis products of Surat lignites clearly demonstrate that the palaeofloral community was dominated by angiosperms during the deposition of these lignites.     

A combined pyrolysis mass spectrometric and light microscopic study of peatified Calluna wood isolated from raised bog peat deposits

Stem wood of the Angiosperm Calluna vulgaris (Scotch heather), isolated at different depths from a selection of raised bog peat deposits, was chemically characterized using in-source pyrolysis mass spectrometry (Py-MS) and Curie-point pyrolysis gas chromatography mass spectrometry (Py-GC-MS). Light microscopy was performed to relate mass spectrometric characteristics with anatomical features. Peatified wood samples, isolated from increasing depth show a gradual decrease in carbohydrate content. This decrease in anatomically reflected in a selective removal of secondary cell wall material from the fibre-tracheids and wood parenchyma. During prolonged peatification a selective removal of hemicellulose sugars is observed, while a part of the cellulose fraction is preserved. This highly resistant cellulose is mainly located in the secondary cell walls of the vessels. The lignin macromolecule is preserved, but a gradual decrease in syringyl to guaiacyl ratio (S/G) is observed during peatification. Because no increase in catechol and phenolic compounds is observed, we conclude that S/G shifts are due to removal the of syringyl-rich secondary cell wall material and the retention of guaiacyl-rich compound middle lamella. Small chemical changes in the lignin macromolecule involve shifts in oxygen substitutions on the aliphatic side chains of the methoxyphenolics and the occurrence of aromatic acids.     

The closed system pyrolysis of β-O-4 lignin substructure model compounds

Lignin substructure model compounds having a β-O-4 linkage were synthesized. These were guaiacylglycerol-β-guaiacyl ether (GGE) and guaiacylglycerol-β-syringyl ether (GSE) which model guaiacyl and syringyl units respectively. Closed system microscale pyrolysis of GGE and GSE was carried out at 300 °C both in the presence and absence of water vapour. The laboratory degradation of GSE occurred predominantly by breaking the C_β–O bond of the β-O-4 linkage to form the ring B fragment of the model compound. This was followed by demethylation of the aromatic methoxyl groups. Char formation was another significant process during pyrolysis. There are structural features of the char formed during the heating of GGE which indicate incorporation of the remaining fragment of the model compound (ring A coupled with the propyl segment of the aryl ether linkage).     

Organic matter and deposition conditions of the Kashpir oil shales

The composition of organic matter was investigated in the oil shales and country rocks of the Kashpir deposit. The analysis of the aromatic fraction of bitumen showed the presence of isorenieratene derivatives, which indicates the accumulation of the sequence under anoxic conditions in the bottom waters of a paleobasin. Special attention was given to the composition of organosulfur compounds from the bitumen of rocks and products of kerogen pyrolysis. The concentrations of hydrocarbon structures occurring in the bitumen in a free state and in sulfur-bearing derivatives are comparable. The composition of the pyrolysis products of kerogen depends on the concentration of organic carbon in the rock: carbon-rich rock varieties contain kerogen whose pyrolysis yields relatively high concentrations of organosulfur compounds and low total contents of n-alkanes/n-alkenes-1.     

Composition of estuarine colloidal material: organic components

Colloidal material in the size range 1.2 nm to 0.4 μm was isolated by ultrafiltration from Chesapeake Bay and Patuxent River waters (U.S.A.). Temperature controlled, stepwise pyrolysis of the freeze-dried material, followed by gas chromatographic-mass spectrometric analyses of the volatile products indicates that the primary organic components of this polymer are carbohydrates and peptides. The major pyrolysis products at the 450°C step are acetic acid, furaldehydes, furoic acid, furanmethanol, diones and lactones characteristic of carbohydrate thermal decomposition. Pyrroles, pyridines, amides and indole (protein derivatives) become more prevalent and dominate the product yield at the 600°C pyrolysis step. Olefins and saturated hydrocarbons, originating from fatty acids, are present only in minor amounts. These results are consistent with the composition of Chesapeake phytoplankton (approximately 50% protein, 30% carbohydrate, 10% lipid and 10% nucleotides by dry weight). The pyrolysis of a cultured phytoplankton and natural particulate samples produced similar oxygen and nitrogencontaining compounds, although the proportions of some components differ relative to the colloidal fraction. There were no lignin derivatives indicative of terrestrial plant detritus in any of these samples. The data suggest that aquatic microorganisms, rather than terrestrial plants, are the dominant source of colloidal organic material in these river and estuarine surface waters.     

Geochemical significance of lipids and lipid-derived substructures interlaced in kerogen

Young kerogens isolated from seven freshwater lakes, six river mouths and four marine surface sediments were subjected to pyrolysis in vacuo. Their pyrolysates were trapped and separated subsequently for determination of hydrocarbons, fatty acids and alcohols. The abundances, carbon number distributions of long (C₁₂) polymethylene chain lipid compounds and relative abundances of pristenes are proposed as possible indices applicable to discrimination between young kerogens from freshwater lacustrine and marine sediments. Some oil-shale kerogens of Eocene and Permian age were pyrolyzed in the same way, where the chain-length distributions of the pyrolysis products showed similar trends as those observed for the pyrolysis of young kerogens.     

Pyrolysis of organic compounds in the presence of ammonia. The Viking Mars lander site alteration experiment

The influence of ammonia on the pyrolysis pattern of selected organic substances sorbed on an inorganic phase was investigated. The thermal degradation products were identified by gas chromatography-mass spectrometry. The feasibility of this technique was tested on a meteoritic sample. All substances examined react with ammonia at the pyrolysis temperature of 500°C, the major products being nitriles and heterocyclic compounds in which nitrogen was incorporated. Based on these results, a model for the non-equilibrium production of organic compounds on Jupiter is discussed. The investigation was performed in connection with the Viking lander molecular analysis. The results obtained indicate that the concentrations of ammonia in the retrorocket fuel exhaust would have been probably too small to produce significant changes in the Martian soil organic compounds if any were found.     

Release of organic nitrogen compounds from Kerogen via catalytic hydropyrolysis

High hydrogen pressure pyrolysis (hydropyrolysis) was performed on samples of solvent extracted Kimmeridge Clay Formation source rock with a maturity equivalent to ca. 0.35% vitrinite reflectance. We describe the types and distributions of organic nitrogen compounds in the pyrolysis products (hydropyrolysates) using GC-MS. Compounds identified included alkyl-substituted indoles, carbazoles, benzocarbazoles, quinolines and benzoquinolines. The distributions of the isomers of methylcarbazoles, C₂-alkylcarbazoles and benzocarbazoles in the hydropyrolysates were compared to a typical North Sea oil. The hydropyrolysates compared to the North Sea oil, showed increased contributions from alkylcarbazole isomers where the nitrogen group is "exposed" (no alkyl substituents adjacent to the nitrogen functionality) and appreciable levels of benzo[b]carbazole relative to benzo[a]- and benzo[c]carbazoles. Hydropyrolysis is found to be an ideal technique for liberating appreciable quantities of heterocyclic organic nitrogen compounds from geomacromolecules. The products released from the immature Kimmeridge Clay are thought to represent a potential source of nitrogen compounds in the bound phase (kerogen) able to contribute to the free bitumen phase during catagenesis.     

Land-derived organic matter in surface sediments from the Gulf of Mexico

Lignin oxidation products and ¹³C/¹²C ratios were compared as indicators of land-derived organic matter in surface sediments from the western Gulf of Mexico. Whole sediments were reacted with cupric oxide to yield phenolic oxidation products that indicated the types and relative amounts of the lignins that were present.Measurements of lignin concentration and carbon isotope abundances both indicated a sharp offshore decrease of land-derived organic matter in most areas of the western Gulf. This decrease results primarily from mixing of terrestrial and marine organic matter. The terrestrially derived material in these sediments has a lignin content similar to that of grasses and tree leaves. Flowering plants contribute most of the sedimented lignin compounds. These lignins apparently occur in the form of well-mixed plant fragments that are transported to sea by rivers and deposited primarily on the inner continental shelf.     

Hydrothermal petroleum of Lake Chapala,Citala Rift,western Mexico: Bitumen compositions from source sediments and application of hydrous pyrolysis

Hydrothermal simulation experiments were performed with contemporary sediments from Lake Chapala to assess the source of the lake tars. The precursor-product relationships of the organic compounds were determined for the source sediments and their hydrous pyrolysis products. The pyrolysis products contained major unresolved complex mixtures of branched and cyclic hydrocarbons, low amounts of n-alkanes, dinosterane, gammacerane, and immature and mature hopane biomarkers derived from lacustrine biomass sources. The results support the proposal that the tar manifestations in the lake are not biodegraded petroleum, but were hydrothermally generated from lacustrine organic matter at temperatures not exceeding about 250 °C over brief geological times.     

Pyrolysis Products of Kerogen from the Upper Jurassic Sequence of the Sysol'sk Shale-Bearing Region

Kerogen separated from rocks of the Upper Jurassic sequence of the Sysol'sk shale-bearing region was investigated by the pyrolytic method in the off-line regime. Multiple alkyl derivatives of thiophene, alkyl benzenes, n-alkanes, alkenes, and isoprenoid hydrocarbons, as well as phenols, were identified in products of the pyrolysis by the chromatomass-spectrometry method. Kerogens from rocks richer in C_org yield a larger fraction of thiophene structures in the pyrolysate composition, indicating the influence of early diagenetic sulfurization of lipids and, possibly, carbohydrates on the accumulation of increased organic matter concentrations in shales.     

Simulated diagenesis and catagenesis of marine kerogen precursors: Melanoidins as model systems for light hydrocarbon generation

Amino acids and sugars are principal constituents of marine organisms. The condensation of amino acids and sugars is one possible nonenzymatic, early diagenetic pathway for the incorporation of these compounds into more complex geopolymers. In this study, aqueous solutions consisting of l-lysine, l-histidine, l-arginine and d-(+)-glucose were heated (100°C) for up to 288 h. Portions of the melanoidin polymer isolated after heating were reheated in the presence of water (hydrous pyrolysis) for 72 h at 325°C. Reaction products were identified by GC and GC/MS. Stable isotopic (δ¹³C) and elemental analyses were used to follow thermal evolution.While the initial melanoidin was synthesized from a simple, four component system, the products generated during hydrous pyrolysis are of considerable complexity, and include straightchain and branched alkanes, alkadienes, alkynes, indole, dimethyl indane, ethyl phenol, quinoline, and xylenes, in addition to a multitude of as yet, unidentified components. Stable carbon isotopic values for the reactants and products correspond to trends observed for naturally generated geopolymers and light gases. Elemental analyses of the melanoidin prior and subsequent to hydrous pyrolysis indicate a kerogen evolution pathway similar to that observed for natural samples. Considering the intractable nature of kerogen, laboratory simulation studies of simple systems can provide an alternative approach for elucidating the origins of geopolymers and their potential for hydrocarbon generation.     

Identification of carotane breakdown products in the 1.64 billion year old Barney Creek Formation, McArthur Basin, northern Australia

Some of the oldest, indisputably indigenous, and thermally exceptionally well preserved biomarkers occur in the uppermost sections of the 1.64 billion year old (Ga) Barney Creek Formation (BCF) of the McArthur Basin in northern Australia. These rocks preserve more than 22 different C₄₀ carotenoid derivatives, including the saturated hydrocarbons β-carotane, γ-carotane and lycopane. However, in deeper sections of the BCF, saturated carotenoid derivatives were not detected. To determine whether their absence from the deeper sections is a primary biological phenomenon or the result of degradation, we simulated the catagenesis of β-carotane in the laboratory by way of hydrous pyrolysis. Using breakdown products as elution standards, we were able to confirm the presence of β- or γ-carotane derivatives in the deeper sections, where the C₄₀ parent compounds had been degraded.     

Quantitative chemical characterization of vitrinite concentrates using pyrolysis-gas chromatography. Rank variation of pyrolysis products

A series of hand-picked vitrinite samples from the Lower Kittanning Seam, Pennsylvania have been examined using quantitative pyrolysis-gas chromatography. These vitrinites ranged in rank from 0.59 to 1.71% reflectance, a rank range from high volatile C bituminous to low volatile bituminous. High molecular weight pyrolysis products included alkyl aromatic and phenolic compounds. Attempts have been made to correlate the pyrolysis product composition to rank parameters including vitrinite reflectance, volatile matter yield, carbon content, atomic H/C ratio and Rock-Eval determined T_max. Total yield of phenols was found to be strongly and inversely rank related. A clear relationship between C₈ alkyl-benzene yield and rank was not found for the sample set.     

Fragment of the chemical structure of type II and II-S kerogen in the Upper Jurassic and Upper Devonian formations of the East European Platform

A model is proposed for a fragment of the chemical structures of the geopolymers based on elemental analysis and the study of the composition of the pyrolysis products of kerogen from the Upper Jurassic and Devonian formations in the East European Platform. The S_org/C ratio in kerogen from oil shales from J₃v₂ is 0.4 or higher, and this kerogen belongs to type II-S, while kerogen from the Domanik rocks does not contain S and belongs to type II. The composition of the pyrolysis products of the Upper Jurassic kerogen testifies to the presence of polysulfur-bound structures in this geopolymer, whose thermolysis results in disulfuric cyclic compounds. No structures of this type are contained in Domanik kerogen. Oxygen-bearing groups in J₃v₂ kerogen are thought to be partly concentrated on simple-ether bonds, whereas D₃dm kerogen is likely dominated by compound-ether and carboxyl structures. Nitrogen-bearing structures in kerogen from Upper Jurassic and Domanik formations are of different genesis: while nitrogen-bearing structures in Jurassic kerogen are mostly aminoacids, Domanik kerogen contains chitin derivatives.     

Identification and emission factors of molecular tracers in organic aerosols from biomass burning: Part 3. Grasses

Smoke particulate matter from grasses (Gramineae, temperate, tropical and arctic) subjected to controlled burning, both under smoldering and flaming conditions, was sampled by high volume air filtration on pre-cleaned quartz fiber filters. The filtered particles were extracted with dichloromethane/methanol and the crude extracts were methylated for separation by thin layer chromatography into hydrocarbon, carbonyl, carboxylic acid ester and polar fractions. Then, the total extract and individual fractions were analyzed by GC–MS. The major organic components directly emitted in grass smoke particles were the homologous series of n-alkanoic acids from plant lipids, n-alkanes from epicuticular wax, and sterols and triterpenols. The major natural products altered by combustion included pyrolysis products from cellulose and lignin biopolymers, and oxidation products from triterpenoids and sterols. Polycyclic aromatic hydrocarbons (PAH) were also present; however, only as minor components. Although the concentrations of organic compounds in smoke aerosols are highly variable and dependent on combustion temperature, the biomarkers and their combustion alteration products are in these cases source specific. The major components are adsorbed on or trapped in smoke particulate matter and thus may be utilized as molecular tracers in the atmosphere for determining fuel type and source contributions from grass burning.     

低熟煤型气的成因化学

用水介质热压模拟、_１３Ｃｎｍｒ分析表明，Ｒｏ＝０.７%以前，煤型有机质中的芳环结构的变化主要是官能团的变化，芳环仍然保留着单环的结构特征，并未发生明显的缩合作用。即在早期热演化过程中由邻甲氧基苯酚结构向邻苯二酚类结构转化，进而转化为烷基酚类结构，同时脱去甲氧基中的甲基。甲氧基含量从Ｒｏ＜０.３%开始迅速减少，到Ｒｏ＝０.７%时已基本脱除完毕。煤型有机质中的甲氧基在热演化早期通过自由基反应脱去甲基，对低熟煤型气有重要贡献。     

Identification of rumanite (Romanian amber) as thermally altered succinite (Baltic amber)

 Romanian amber (rumanite) has been considered to be a separate species of fossil resin for more than a century. While earlier investigators held it to be very similar to succinite (Baltic amber), modern scholars have assigned it a distinctly different botanical origin. We have found that almost all of the constituents of the ether-soluble fractions of 13 specimens of authentic rumanite identified by gas chromatography–mass spectrometry have previously been reported in the soluble fraction of succinite, including succinic acid and its monoterpene esters. Additionally and significantly, the soluble fraction of rumanite contains a number defunctionalized compounds that do not preexist in succinite, but that are produced by pyrolysis of whole succinite or of its insoluble polymeric fraction. Simultaneous methylation pyrolysis–gas chromatography–mass spectrometry of the polymeric fraction of seven of the rumanite specimens yielded further copious amounts of dimethyl succinate, a number of diterpene resin acid methyl esters, and additional defunctionalized compounds known to be pyrolysis products of succinite. The evidence shows conclusively that the botanical origin of rumanite is not distinct from that of succinite. Rather, rumanite is a succinite that has suffered partial thermal degradation in the course of the folding of the Oligocene Kliwa sandstone formation in which it is most commonly found. Received: 30 December 1999 / Accepted: 16 May 2000     

Analysis of organic matter by flash pyrolysis-gas chromatography–mass spectrometry in the presence of Na-smectite: When clay minerals lead to identical molecular signature

Different studies have already pointed out the influence of clays during the analysis of pure organic compounds (especially alkanols, alkanoic acids) as well as macromolecules (humic acids) by flash pyrolysis-gas chromatography–mass spectrometry (PyGC–MS). Especially, the occurrence of clay minerals favors the generation of aromatic units such as alkylbenzenes and polycyclic aromatic hydrocarbons. So as to better identify the nature of the organic compounds which are sensitive to the presence of clays during flash pyrolysis, a humic acid mixed in variable proportions of a Na-homoionic clay was tested. The smectite/humic acid mixtures containing from 10% to 100% humic acid allowed us to identify the progressive disappearance or appearance of specific compounds after PyGC–MS.n-Alk-1-enes disappear when the clay proportion is higher than 67%. For higher contents of Na-smectite, n-alkanes become less and less abundant with a preferential consumption of high molecular weight n-alkanes, whereas the aromatic hydrocarbon proportion increases. Moreover, the distribution of each aromatic hydrocarbon family (alkylbenzenes and alkylnaphthalenes) has been investigated. The pyrogram of pure humic acid exhibits a specific distribution of alkylbenzenes and alkylnaphthalenes reflecting the structure of the organic macromolecule. With the increase in clay proportion, these distributions are modified and lead to other distributions with a preferential predominance of thermally stable isomers.Pyrograms of humic acid and undecanoic acid in the presence of 90% of Na-smectite are similar, especially concerning alkylbenzene and alkylnaphthalene distributions. Therefore, clays (Na-smectite in our experiments) in high proportion modify initial organic products by recombination reactions and lead to the generation of new compounds of very similar distribution, whatever the nature of the initial organic matter. Such results underline the very important catalytic properties of clay minerals on functionalized organic matter during flash pyrolysis.     

Compositional and source characterization of base progressively extracted humic acids using pyrolytic gas chromatography mass spectrometry

Cyclic base extraction is a commonly used method for the isolation of humic acids from soils and sediments. However, every extract may differ in chemical composition due to the complex nature of humic acids. To better understand the chemical composition of each extract, the heterogeneous property of humic acids and their speciation in environmental samples, eight fractions of humic acids were obtained in the present work by progressive base-extraction of Pahokee peat, and their chemical composition was characterized using two complementary pyrolytic techniques, namely conventional pyrolysis and methylation pyrolysis (TMAH) GC/MS. These quick and effective procedures provide an insight into the structure of macromolecules. The work shows that the lignin-derived aromatic compounds are major components of pyrolysates in both pyrolytic techniques, while aliphatic compounds originating from microorganisms and plants are minor components. Other compounds derived from proteins and carbohydrates at lower concentrations were also detected. Fatty acids were found in the pyrolysis without methylation, indicating their association with humic acid in a free state. These compounds are different from those formed during pyrolysis with in situ methylation, where fatty acids are generally believed to be the cleavage products of carboxylic groups bound to humic acids. A relative decreasing abundance of aromatic components and increasing abundance of aliphatic components in the pyrolysates as the peat was progressively extracted was also observed in this work, suggesting that the extraction of more hydrophobic aliphatics may be delayed in comparison to the aromatic components. Speciation and origin differences may also be important particularly considering that the contribution from lignin organic matter decreased with extraction number, as the contribution of microbial organic matter increased. The observed change in chemical composition with the extracted fractions indicates again that the humic acid distribution and their speciation are complex, and complete extractions are necessary to obtain a representative humic acid sample.