Sediment depth and habitat as predictors of the diversity and composition of sediment bacterial communities in an inter‐tidal estuarine environment

Saltmarshes, seagrass meadows and mudflats are key habitats in estuarine ecosystems. Despite being involved in key ecological processes, the influence of different estuarine habitats on sediment bacterial communities remains understudied. Few studies have analysed and compared the bacterial communities of more than one estuarine habitat at different depths. Here, we investigated to what extent different habitats (mudflats; mono‐specific plots of seagrass [Zostera noltei] and two saltmarsh plants [Juncus maritimus and Spartina maritima]) and sampling depth (0, 5, 10 cm) influence variation in sediment bacterial composition. Our results showed significant differences in the abundance of selected higher taxa amongst habitats and depths. Surface sediment was characterized by bacteria assigned to the Acidimicrobiia, Flavobacteriia, Thiotrichales, Alteromonadales and Rhodobacterales, whereas in deeper sediment Deltaproteobacteria and Anaerolineae were dominant. Juncus sediment, in turn, presented the most distinct bacterial community, with Myxococcales abundant in this habitat. Sampling depth and habitat proved significant predictors of variation in sediment bacterial composition. The compositional dissimilarities amongst habitats and depths suggest functional divergence and complementarity, thus enhancing ecosystem functioning and health. Given the compositionally distinct communities found in different habitats and depths, our study corroborates the importance of conserving a diverse array of estuarine habitats.     

The influence of sediment resuspension on the degradation of phenanthrene in flow-through microcosms

The effect of sediment resuspension on the mineralization of phenanthrene was examined in microcosms and sediment slurries. In computer-controlled, flow-through microcosms, 14C-phenanthrene-amended sediments were resuspended into overlying oxic water at frequencies of 12, 4, 1, 0.25 and 0 d(-1). In slurry bottle experiments 14C-phenanthrene-amended sediments were continuously resuspended under oxic (excess air headspace) and anoxic (N2 headspace) conditions and mineralization was measured at periods from 2 h to 7 days. Our main findings were: (1) mineralization rate constants from the microcosms ranged from 0.001 to 0.01 d(-1) and increased with frequency of resuspension, (2) these rates fell between those measured in oxic and anoxic slurries and were predicted within a factor of 2.5 by a model in which mineralization depended on the degree of oxygen exposure, and (3) the phenanthrene-degrading bacterial community was more active in resuspended sediments incubated in the microcosms than in sediments which were not resuspended, or which were stored under refrigeration. We conclude from these experiments that the effects of sediment resuspension on phenanthrene degradation are consistent with a primary role of average oxygen exposure, and also an alteration in the PAH-degrading activity of microbial populations.     

Laboratory effects of microcosm size and the pesticide chlorpyrifos on benthic macroinvertebrate colonization of soft estuarine sediments

A 42-d flow-through experiment was conducted to evaluate the effects of the organo-phosphate pesticide, chlorpyrifos, and microcosm size (small: 144 cm²; large: 400 cm²) on benthic estuarine macroinvertebrate colonization. Nested central and perimeter (outside margin) cores were used to assess animal distribution within microcosms. Fine-grained, organically-rich (approximately 4.0% organic carbon and 20% dry wt) sediments were nominally fortified with chlorpyrifos controls, low (1.0) and high treatments (10.0 μg⁻¹ wet sediment). Large microcosms contained a significantly (p < 0.05) higher average taxa richness (10.9) than small microcosms (8.6) but small microcosms contained a significantly greater average animal density (295.8; numerical abundance adjusted to unit area) than large microcosms (120.5). Density of the polychaete, Neanthes succinea, the amphipod, Corophium acherusicum, and the barnacle, Balanus sp., was significantly greater in small microcosms but density of Ensis minor was significantly greater in large microcosms. In small and large microcosms, respectively, densities averaged significantly greater numbers in perimeter cores (e.g. 203.1 and 75.1) vs central cores (71.9 and 45.4). Average density decreased significantly with increasing chlorpyrifos concentration from controls (326.8), to low (123.8) and high (78.8) treatments. The density decrease was significantly related only to C. acherusicum whose densities decreased from controls (285.8) to low (88.5) and high (43.9) dosed microcosms. Application of an equilibrium partitioning model indicated that density of C. acherusicum was sensitive to an estimated interstitial water concentration of approximately 0.48 μg liter⁻¹. Non-metric multidimensional scaling ordination analyses provided important insights into response patterns not available through ANOVA procedures. A permutation procedure (ANOSIM) detected a significant size effect (p < 0.0001) and a significant effect between controls and low (p < 0.042) and high doses (p < 0.013) but not between low and high chlorpyrifos treatments (p < 0.465). A single species, C. ascherusicum, as in the ANOVA analyses, dominated contributions to community average percent dissimilarity in most combinations of microcosm size and chlorpyrifos treatment effects (range: 8.4–21.9%). Community structure differed significantly in several combinations of microcosm size, core position and chlorpyrifos treatment. Results confirm earlier work that intrinsic design factors influence benthic macroinvertebrate community structure and determine taxa available to pesticide exposure in microcosms.     

Exposure of grass shrimp to sediments receiving highway runoff: Effects on reproduction and DNA

A grass shrimp bioassay was carried out on sediments from three estuarine stations which were different distances from a highway storm drain. Total polycyclic aromatic hydrocarbon (PAH) concentrations were 29, 1.5 and 0.1 μg/g sediment at stations A (next to drain), B (100 m from drain) and C (500 m from drain), respectively. Lower embryo production and embryo hatching rates and a higher level of DNA strand breaks (comet assay) were observed in grass shrimp exposed to stations A and B sediments. There appeared to be an association between reproduction abnormalities and increased DNA strand breaks as a result of grass shrimp exposure to estuarine sediments receiving highway runoff.     

An Examination of the Fluxes of Nitrogen and Phosphorus in Temperate and Tropical Estuaries: Current Estimates and Uncertainties

In a number of regions of the world, enhanced flows of nitrogen (N) and phosphorus (P) from land to sea are of major concern because of the observable deterioration in the quality of many nearshore marine waters. Estuaries receive N and P from river and other runoff, from waste discharges, from the atmosphere and ocean and from exchange with coastal groundwaters (which in all likelihood results in a net input to the estuary). For rivers that do not discharge directly onto the continental shelf, seaward fluxes of N and P will be modified by within-estuary transformations of reactive species, the burial of particulate N and P in sediments (sub/intertidal, saltmarsh, mangrove) and the loss of gaseous N and P species by bacterial reduction.Driven by a desire to understand the effects of changing N and P loads on water quality, and to gain insights into the true modification of their fluxes within estuaries, much effort has been expended on providing quantitative estimates of the sources and sinks of these constituents. Yet, accurate and precise estimates on a global scale remain elusive. Riverine inputs of total N and P are calculated to be 35–64 and 22 Mt a⁻¹, respectively. These inputs are dominated by particulate species, and because of this, are likely to be imprecise as overall sediment fluxes are disproportionately influenced by infrequent, poorly sampled, high flow events. Direct aeolian inputs of N to estuaries (P inputs are minor), at a minimum of 1–4 Mt a⁻¹, are small but significant, although again good estimates are hampered by the apparent importance of infrequent, and thus under-sampled, deposition events. Indirect atmospheric inputs via deposition onto and runoff from catchments may be highly significant, at least in environments bounding the North Atlantic Ocean. Groundwater inputs are generally unknown, but, for N, may be 5–10 Mt a⁻¹ (no data on P). Information on the global inputs of N and P from waste discharges and mariculture do not appear to be available. Denitrification, estimated to beca . 33 Mt a⁻¹, may account for 52–94% of the currently estimated total N inputs; in contrast, the loss of P via venting of gaseous phosphine is unknown. The burial of N and P in sediments is about 7% and 30% of their total inputs, respectively. Nevertheless, reliable information on the modifying role of estuarine sediments appears far from complete.Globally, the inputs of N and P to the marine environment from all sources are expected to increase over the next few decades. The resulting effects of these increases on the marine environment, including any influences due to estuarine processing, may be partly assessed through the use of dynamic transport and transformation estuarine models for N and P. A further important development in this respect will be the linking of complementary models (e.g. catchment/river/estuarine/coastal zone) and their coupling to strategic large scale observations.     

Determination of phospholipid fatty acid structures and stable carbon isotope compositions of deep-sea sediments of the Northwest Pacific, ODP site 1179

Sediment samples ranging from 0.05 to 278 m below sea floor (mbsf) at a Northwest Pacific deep-water (5564 mbsl) site (ODP Leg 191, Site 1179) were analyzed for phospholipid fatty acids (PLFAs). Total PLFA concentrations decreased by a factor of three over the first meter of sediment and then decreased at a slower rate to approximately 30 mbsf. The sharp decrease over the first meter corresponds to the depth of nitrate and Mn(IV) reduction as indicated by pore water chemistry. PLFA-based cell numbers at site 1179 had a similar depth profile as that for Acridine orange direct cell counts previously made on ODP site 1149 sediments which have a similar water depth and lithology. The mole percentage of straight chain saturated PLFAs increases with depth, with a large shift between the 0.95 and 3.95 mbsf samples. PLFA stable carbon isotope ratios were determined for sediments from 0.05 to 4.53 mbsf and showed a general trend toward more depleted δ¹³C values with depth. Both of these observations may indicate a shift in the bacterial community with depth across the different redox zones inferred from pore water chemistry data. The PLFA 10me16:0, which has been attributed to the bacterial genera Desulfobacter in many marine sediments, showed the greatest isotopic depletion, decreasing from − 20 to − 35‰ over the first meter of sediment. Pore water chemistry suggested that sulfate reduction was absent or minimal over this same sediment interval. However, 10me16:0 has been shown to be produced by recently discovered anaerobic ammonium oxidizing (anammox) bacteria which are known chemoautotrophs. The increasing depletion in δ¹³C of 10me16:0 with the unusually lower concentration of ammonium and linear decrease of nitrate concentration is consistent with a scenario of anammox bacteria mediating the oxidation of ammonium via nitrite, an intermediate of nitrate reduction.     

Bacterial iron oxide reduction in a terrigenous sediment-impacted tropical shallow marine carbonate system, north Jamaica

Discovery Bay, a carbonate-dominated embayment in north Jamaica, has been subject to inputs for 40 years of iron-rich bauxite sediment associated with the local mining and transport of processed bauxite. As such, this site is an ideal natural laboratory to study the records and impacts of iron oxide inputs upon geochemical, diagenetic, and microbial processes in tropical carbonate sediments.Total Fe contents in sites in the bay not receiving bauxite inputs are negligible and porewater Ca²⁺, SO₄²⁻ and Cl⁻ indicate that bacterial sulphate reduction is an important process. In contrast, surface sediments receiving bauxite inputs contain significant total Fe, from 44 μmol/g in shallow (5 m water depth) sites to 110 μmol/g in deeper (20 m water depth) sites. Up-core increases in total Fe record increased temporal inputs into the bay. Within these Fe-rich sediments porewater data shows the presence of Fe^II released by bacterial Fe^III reduction. There is no direct evidence for significant bacterial sulphate reduction in these sediments. Iron oxides within all bauxite-impacted sediments display a high potential reducibility, from 40% to 80% of the total Fe present as dithionite-extractable Fe^III. Experimental analysis of the potential susceptibility to, and rates of, bacterial Fe^III reduction, utilising Discovery Bay sediment and Shewanella putrefaciens CN32 (a known Fe^III-reducer) has confirmed the high bacterial reducibility of iron oxides within the sediment. Up to 75% of initial dithionite-extractable Fe^III in the sediments was reduced over 15 days.The presence of iron oxides within the Discovery Bay shallow marine carbonate systems has markedly altered the chemical diagenetic processes taking place, with a shift from apparent dominance of bacterial sulphate reduction at non-impacted (Fe-poor) sites, to highly significant bacterial Fe^III reduction in Fe-rich bauxite-impacted sediments. Given the perceived global increases in terrigenoclastic sediment inputs into tropical carbonate systems as a result of land-use and climate changes, coupled with the documented role that iron oxide reduction plays in nutrient and contaminant cycling in sediment systems, more research into the perturbation of early diagenesis by iron oxide inputs is required.     

Microphytobenthos vertical migratory photoresponse as characterised by light-response curves of surface biomass

The migratory response of intertidal microphytobenthos to changes in irradiance was studied on undisturbed estuarine sediments. Two non-destructive optical techniques were used to trace variations in vivo of surface biomass: PAM fluorometry, for measuring the minimum fluorescence level (F_o); and spectral reflectance analysis, for quantifying the normalized difference vegetation index (NDVI). Following the formation of a dense biofilm at the surface, replicated sediment samples were simultaneously exposed to six different irradiance levels, ranging from 50 to 1500 μmol m⁻² s⁻¹, during a period of 120 min. The migratory photoresponse of the biofilms was characterised by constructing biomass vs. light curves (BLC), relating the accumulation of microalgal biomass after that period (estimated by F_o or NDVI) to the irradiance level incident on the surface. BLCs allow characterising the main features of the migratory photoresponse of intact biofilms. Typical BLC showed a clear biphasic pattern, with an increase in microalgal accumulation under irradiances below 100 μmol m⁻² s⁻¹, maximum values under 100–250 μmol m⁻² s⁻¹, and a gradual decrease of surface biomass under higher irradiances, indicating a strong photophobic downward migratory response. Similar BLC patterns were obtained when measuring F_o or NDVI. The construction of BLCs for biofilms from intertidal sites with distinctive sediment characteristics and diatom taxonomic composition allowed to detected significant differences in the migratory photoresponse. Biofilms from a muddy sediment exhibited considerably larger amplitude in the migratory photoresponse than the biofilms from a sandy mud site, especially under high irradiances. The photophobic migratory response to high light was found to vary among diatom species, particularly in the case of the biofilms from the muddy sediments.     

Bacterial contribution to manganese oxidation in a deep coastal sediment

The characteristics of Mn(II) removal from sediment porewater and the potential role of manganese-oxidizing bacteria in this process were examined in sediments from a 335-m deep station in the Laurentian Trough of the St. Lawrence estuary. Manganese-oxidizing bacteria were most abundant in the thin layer of oxidized surface sediment, where Mn(II) removal rates were also fastest. The first-order rate constants for Mn(II) removal decreased from 1·2 × 10³ day⁻¹ to 6·6 day⁻¹ over the first 30-mm depth. In experimental slurries, sediments removed Mn(II) from reduced zone porewater by a two-step process: a rapid saturation of Mn(II) binding sites was followed by a slower O₂-enhanced removal rate which paralleled the apparent rate of Mn(II) oxidation. Sodium azide and mercuric chloride were tested specifically for their usefulness as bacterial poisons in sediment slurry systems. Sodium azide interfered with Mn(II) removal at low concentrations and was not an effective poison. Mercuric chloride inhibited bacterial activity at concentrations far lower than those at which significant interference of Mn(II) removal occurred. The response of sediment slurries treated with mercuric chloride indicated that the initial oxidation of sorbed Mn(II) was not bacterially-mediated under the experimental conditions tested.     

Geochemical cycling in the Hooghly estuary, India

U–Th decay series isotopes, δ¹⁸O and Si measurements in the river estuarine waters and sediments of the polluted Hooghly estuary as well as the surface waters of the Bay of Bengal, its high salinity end member, are reported. Dissolved Si indicates that there are probably two mixing regimes, dissolved U behaviour is nonconservative and δ¹⁸O behaves conservatively in the overall estuarine region. Isotopes of reactive elements, viz. ²³⁴Th and ²¹⁰Po, are removed from the estuarine waters in <2 days and <1 month, respectively, which is due to high suspended matter (30–301 mg l⁻¹). ²²⁸Ra and ²²⁶Ra are profusely released into the estuarine waters in the low to mid-salinity regions.As expected, the opposite trend is observed in the case of estuarine sediments and suspended matter. Reactive isotopes of Th, ²¹⁰Pb and ²¹⁰Po are enriched, whereas Ra isotopes are depleted with respect to their parent nuclides in the estuarine sediments and suspended matter. ²³²Th/Al ratio appears well suited to study the distribution and mixing of the bed load sediments of the Ganga–Brahmaputra (G–B) and the Hooghly rivers with those from other rivers on the Bay of Bengal floor.     

Identifying soft sediments at sea using GIS-modelled predictor variables and Sediment Profile Image (SPI) measured response variables

Macrofauna composition and diversity in soft sediments are commonly used as “health indicators” in various pollution monitoring programmes worldwide. Hence, finding a modelling method for predicting the presence of soft sediments and enable production of digital maps of where soft sediments are likely to be found would be valuable for developing a cost-effective sampling design. This study presents a first-generation model that can predict where to find soft sediments in coastal areas with a complex topography and a mosaic of seabed habitat types. We used geophysical data that were quantitative, objectively defined (through GIS modelling) and integrated over time. We analysed, using a Generalised Additive Model (GAM) and the model-selection approach Akaike Information Criterion (AIC), the influence of in-situ measured depth and GIS-modelled terrain structures, wave exposure and current speed on the distribution of soft sediment measured using a Sediment Profile Image (SPI) camera. Our analyses showed that the probability of finding soft sediment was best determined by depth, terrain curvature and median current speed at the seafloor. These predictors were used to develop a spatial predictive GIS-model/-map (for parts of Skagerrak, Norway, with a spatial resolution of 25 m × 25 m) of the probability of soft seabed occurrence.     

Petroleum hydrocarbons in sediments of Southampton water estuary

The sediments of Southampton Water were analysed for petroleum hydrocarbons to determine the fate of petrochemical refinery waste in the estuary. Much of the petroleum hydrocarbons appears to be removed by adsorption onto estuarine sediments close to source. Surface sediment concentrations range from 3·1mg/g dry weight near a refinery to 0·5 mg/g dry weight at locations distant from the refinery.The absence of any change with depth in total hydrocarbon concentrations from some sediment cores and the presence of distinct ‘oil’ horizons in others suggests that mixing of sediments in the area is very random. Sedimentation rates in areas where a distinct oil horizon was observed ranged from 1 to 3cm a year.     

Contrasting chemical and isotopic compositions of organic matter in Changjiang (Yangtze River) estuarine and East China Sea shelf sediments

To examine the source and preservation of organic matter in the shelf sediments of the East China Sea (ECS), we measured bulk C/N and isotopes, organic biomarkers (n-alkanes and fatty acids) and compound-specific (fatty acids) stable carbon isotope ratios in three sediment cores collected from two sites near the Changjiang Estuary and one in the ECS shelf. Contrasting chemical and isotopic compositions of organic matter were observed between the estuarine and shelf sediments. The concentrations of total n-alkanes and fatty acids in the shelf surface sediments (0–2 cm) were 5–10 times higher than those in estuarine surface sediments but they all decreased rapidly to comparable levels below the surface layer. The compositions of n-alkanes in the estuarine sediments were dominated by C₂₆-C₃₃ long-chain n-alkanes with a strong odd-to-even carbon number predominance. In contrast, the composition of n-alkanes in the shelf sediment was dominated by nC₁₅ to nC₂₂ compounds. Long-chain (>C₂₀) fatty acids (terrestrial biomarkers) accounted for a significantly higher fraction in the estuarine sediments compared to that in the shelf sediment, while short-chain (<C₂₀) saturated and unsaturated fatty acids were more abundant in the shelf surface sediments than in the estuarine sediments. Stable carbon isotopic ratios of individual fatty acids showed a general positive shift from estuarine to shelf sediments, consistent with the variations in bulk δ ¹³C_TOCTOC. These contrasts between the estuarine and shelf sediments indicate that terrestrial organic matter was mainly deposited within the Changjiang Estuary and inner shelf of ECS. Post-depositional diagenetic processes in the surface sediments rapidly altered the chemical compositions and control the preservation of organic matter in the region.     

The relationship between seagrass (Posidonia oceanica) decline and sulfide porewater concentration in carbonate sediments

In this study we test the hypothesized negative relationship between seagrass status and porewater hydrogen sulfide (H₂S) levels, through a comparative analysis within a range of seven Posidonia oceanica meadows growing over carbonate sediments in the NW Mediterranean Sea around Mallorca Island. The studied meadows range from meadows growing on sediments with very low sulfide porewater concentrations (4.6 μM) to those growing over higher sulfide conditions (33.5 μM). Organic matter content, sulfate reduction rates and sulfide porewater concentrations in the sediments were determined concurrently with the assessment of demographic plant dynamics (specific mortality and net population growth rates). Sulfide porewater concentration increased with increasing organic matter content in the sediment, while net population growth decreased significantly with low increases of sulfide concentrations. Our results confirm the previously suspected vulnerability of seagrass meadows growing on carbonate sediments to increased sulfide levels. An excess of 10 μmols H₂S L⁻¹ porewater is identified to already conduce P. oceanica meadows to decline, which this study identifies, particularly, as strongly sensitive to sulfides. The results reported here suggest that even moderate increases in organic carbon inputs may lead to enhancement of dissolved sulfides and may be an important factor for seagrass status in these iron-depleted carbonate sediments from the Mediterranean Sea.     

Factors influencing benthic bacterial abundance, biomass, and activity on the northern continental margin and deep basin of the Gulf of Mexico

As part of a larger project on the deep benthos of the Gulf of Mexico, an extensive data set on benthic bacterial abundance (n>750), supplemented with cell-size and rate measurements, was acquired from 51 sites across a depth range of 212–3732 m on the northern continental slope and deep basin during the years 2000, 2001, and 2002. Bacterial abundance, determined by epifluorescence microscopy, was examined region-wide as a function of spatial and temporal variables, while subsets of the data were examined for sediment-based chemical or mineralogical correlates according to the availability of collaborative data sets. In the latter case, depth of oxygen penetration helped to explain bacterial depth profiles into the sediment, but only porewater DOC correlated significantly (inversely) with bacterial abundance (p<0.05, n=24). Other (positive) correlations were detected with TOC, C/N ratios, and % sand when the analysis was restricted to data from the easternmost stations (p<0.05, n=9–12). Region-wide, neither surface bacterial abundance (3.30–16.8×10⁸ bacteria cm⁻³ in 0–1 cm and 4–5 cm strata) nor depth-integrated abundance (4.84–17.5×10¹³ bacteria m⁻², 0–15 cm) could be explained by water depth, station location, sampling year, or vertical POC flux. In contrast, depth-integrated bacterial biomass, derived from measured cell sizes of 0.027–0.072 μm³, declined significantly with station depth (p<0.001, n=56). Steeper declines in biomass were observed for the cross-slope transects (when unusual topographic sites and abyssal stations were excluded). The importance of resource changes with depth was supported by the positive relationship observed between bacterial biomass and vertical POC flux, derived from measures of overlying productivity, a relationship that remained significant when depth was held constant (partial correlation analysis, p<0.05, df=50). Whole-sediment incubation experiments under simulated in situ conditions, using ³H-thymidine or ¹⁴C-amino acids, yielded low production rates (5–75 μg C m⁻² d⁻¹) and higher respiration rates (76–242 μg C m⁻² d⁻¹), with kinetics suggestive of resource limitation at abyssal depths. Compared to similarly examined deep regions of the open ocean, the semi-enclosed Gulf of Mexico (like the Arabian Sea) harbors in its abyssal sediments a greater biomass of bacteria per unit of vertically delivered POC, likely reflecting the greater input of laterally advected, often unreactive, material from its margins.     

Short-term variability of suspended sediment and phytoplankton in Tampa Bay,Florida: Observations from a coastal oceanographic tower and ocean color satellites

We examined short-term phytoplankton and sediment dynamics in Tampa Bay with data collected between 8 December 2004 and 17 January 2005 from optical, oceanographic, and meteorological sensors mounted on a coastal oceanographic tower and from satellite remote sensing. Baseline phytoplankton (chlorophyll-a, Chl) and sediment concentrations (particle backscattering coefficient at 532 nm, bbp(532)) were of the order of 3.7 mg m⁻³ and 0.07 m⁻¹, respectively, during the study period. Both showed large fluctuations dominated by semidiurnal and diurnal frequencies associated with tidal forcing. Three strong wind events (hourly averaged wind speed >8.0 m s⁻¹) generated critical bottom shear stress of >0.2 Pa and suspended bottom sediments that were clearly observed in concurrent MODIS satellite imagery. In addition, strong tidal current or swells could also suspend sediments in the lower Bay. Sediments remained suspended in the water column for 2–3 days after the wind events. Moderate Chl increases were observed after sediment resuspension with a lag time of ˜1–2 days, probably due to release of bottom nutrients and optimal light conditions associated with sediment resuspension and settling. Two large increases in Chl with one Chl > 12.0 mg m⁻³ over ˜2 days, were observed at neap tides. For the study site and period, because of the high temporal variability in phytoplankton and sediment concentrations, a monthly snapshot can be different by −50% to 200% from the monthly “mean” chlorophyll and sediment conditions. The combination of high-frequency observations from automated sensors and synoptic satellite imagery, when available, is an excellent complement to limited field surveys to study and monitor water quality parameters in estuarine environments.     

Interactions between sediment chemistry and frenulate pogonophores (Annelida) in the north-east Atlantic

The small frenulate pogonophores (Annelida: Pogonophora a.k.a. Siboglinidae) typically inhabit muddy sediments on the continental slope, although a few species occur near hydrothermal vents and cold seeps. We present data on the distribution and habitat characteristics of several species on the European continental shelf and slope from 48°N to 75°N and show how the animals interact with the chemistry of the sediments. The environments inhabited include: shallow (30 m), organic-rich, fjord sediments; slope sediments (1000–2200 m) and methane seeps at 330 m depth. All the species studied obtain nutrition from endosymbiotic bacteria. They take up reduced sulphur species, or in one case, methane, through the posterior parts of their tubes buried in the anoxic sediment. We conclude that most species undertake sulphide ‘mining’, a mechanism previously demonstrated in the bivalves Lucinoma borealis and Thyasira sarsi. These pogonophores participate in the sulphur cycle and effectively lower the sulphide content of the sediments. Our results show that the abundance of frenulate pogonophores increases with increasing sedimentation and with decreasing abundance of other benthos, particularly bioturbating organisms. The maximum sustainable carrying capacity of non-seep sediments for frenulate pogonophores is limited by the rate of sulphate reduction.     

广东沿海香港牡蛎消化道异养菌统计及其耐药性研究

本研究针对高温时期(6月、9月)广东沿海地区的香港牡蛎(Crassostrea hongkongensis)体内异养细菌总数和弧菌总数进行了深入的调查,并由添加单种抗生素(分别是:庆大霉素、呋喃唑酮、利福平、环丙沙星、恩诺沙星、氯霉素、复方新诺明)的培养基中分离得到310个菌株。进一步采用纸片扩散法(kirby-bauer法)针对常见的抗生素对此310个菌株进行药敏测试,了解不同来源菌株的耐药状况。结果表明310个菌株分属48个不同种属,主要是肠杆菌(Enterobacter)、弧菌(Vibrio)、芽孢杆菌(Bacillus)、肺炎克雷伯菌(Klebsiella)、希瓦氏菌(Shewanella)、不动杆菌(Acinetobacter)、假单胞菌(Pseudomonas)、短波单胞菌(Brevundimonas)、发光杆菌(Photobacterium)、黄杆菌(Tenacibaculum)、盐单胞菌(Halomonas)等。在9月份从牡蛎体内分离的异养细菌比6月份分离的异养细菌高出1～2个数量级(除台山外)。6月份从台山地区牡蛎分离的异养细菌数(2.6×10~6～5.8×10~6 cfu/g)最多,高出其他地区1～3个数量级。药敏测试结果显示牡蛎体内异养细菌对20种抗生素普遍存在抗性,尤其对青霉素、卡拉霉素、呋喃唑酮、阿莫西林、克林霉素及万古霉素表现出较高的耐药率。高温时期(6月、9月)分离的异养菌大多数为多重耐药细菌,其比例分别为84.18%和91.72%。本研究将为牡蛎养殖业的疾病控制以及水产养殖中细菌的耐药状况提供重要参考依据。     

Phosphorus distribution in the estuarine sediments of the Daliao river,China

The objective of this study was to investigate the phosphorus distribution in the estuarine sediments of the Daliao river, intensively affected by municipal effluent and agricultural activity for about 50 years. Surface sediment samples were taken at 35 sites in the estuarine area and phosphorus species and contents of total P, Al, Fe, and Ca in the sediments were measured. Results showed that the content of total P in the sediments ranged from 230 to 841 mg kg⁻¹, with an average of 549 mg kg⁻¹. Ca–bound P, residual P, Al–bound P, reductant–soluble P, Fe–bound P, and soluble and loosely bound P were averagely 44.5, 21.6, 13.6, 11.7, 8.9 and 0.2% of total P, respectively. With the gradual increase of total P content, Al–bound P, reductant–soluble P, and Fe–bound P generally increased, while the rest species of P did not. This might indicate that anthropogenic P is bound to Al and Fe oxides. Regression analysis showed that Al–bound P and sum of Fe–bound P and reductant–soluble P were correlated to the contents of total Al and Fe, respectively. On the other hand, Ca–bound P was not correlated to the content of total Ca in the sediment, probably suggesting that Ca–P was mainly from authigenic marine origin. Whereas the content of total P in the estuarine sediments of the Daliao river was within the range of total P content for Chinese and worldwide river estuaries as well as coastal sediments, non-calcium apatite phosphorus content in the estuarine sediments of the Daliao river was relatively higher, indicating higher release risk and bioavailability of P in the sediment. On the other hand, the molar ratio of total Fe to total P was 16–34 in the estuarine sediments of the Daliao river, suggesting that iron oxides/hydroxides in the sediments might be able to sequester more phosphorus. Therefore, the accumulation or release of P in/from the estuarine sediments might be dependent on the external loading of P and the estuarine eutrophication may be sustained by the internal bioavailable P pools following the decrease of the external P loading.     

An evaluation of metal bioaccessibility in estuarine sediments using the commercially available protein, bovine serum albumin

The bioaccessibility of metals (Al, Ca, Fe, Mn, Ag, Cd, Co, Cu, Ni, Pb, Sn, Zn) in oxic estuarine sediments has been evaluated using solutions of a commercially available protein (bovine serum albumin; BSA) that mimic the chemical conditions encountered in the gut environment of many deposit-feeding organisms. Over a 20 h incubation period with 5 g L^− 1 BSA, metal mobilisation was generally biphasic in that a relatively short period of rapid release was succeeded by more gradual release or approach to equilibrium, although in some cases metal readsorption was evident during the time-courses. Availability to BSA, defined as metal released after 20 h relative to metal extracted by boiling aqua regia, was greatest for Cd, Ni, Ca and Zn and lowest for Fe and Mn, and correlated well with, but was an order of magnitude lower than, metal digested by acidified hydrogen peroxide. Time-courses conducted in the absence of the protein revealed that significant quantities of Ca and Mn were water-soluble, reflecting the partial dissolution of carbonates and hydrous Mn oxides, respectively. Additional experiments indicated a net increase in metal release with increasing BSA concentration and, with the exception of Ca and Mn, a substantial increase in metal mobilisation after sediment organic matter had been digested by peroxidation. These observations suggest that, apart from Ca and Mn, metal release proceeds via complexation with component amino acids of the protein, denudation of organic host phases, and exposure of inorganic, metal-bearing minerals. Accordingly, the bioaccessibility of a metal is predicted to be dependent on its (i) affinity for proteinaceous ligands, (ii) association with components of digestible sediment organic matter, and (iii) degree of binding at relatively weak sites on sediment phases that are exposed or modified by the action of proteins and other chemical constituents of the gut environment.