Effect of hydroxamate siderophores on Fe release and Pb(II) adsorption by goethite

Hydroxamate siderophores are biologically-synthesized, Fe(III)-specific ligands which are common in soil environments. In this paper, we report an investigation of their adsorption by the iron oxyhydroxide, goethite; their influence on goethite dissolution kinetics; and their ability to affect Pb(II) adsorption by the goethite surface. The siderophores used were desferrioxamine B (DFO-B), a fungal siderophore, and desferrioxamine D₁, an acetyl derivative of DFO-B (DFO-D1). Siderophore adsorption isotherms yielded maximum surface concentrations of 1.5 (DFO-B) or 3.5 (DFO-D1) μmol/g at pH 6.6, whereas adsorption envelopes showed either cation-like (DFO-B) or ligand-like (DFO-D1) behavior. Above pH 8, the adsorbed concentrations of both siderophores were similar. The dissolution rate of goethite in the presence of 240 μM DFO-B or DFO-D1 was 0.02 or 0.17 μmol/g hr, respectively. Comparison of these results with related literature data on the reactions between goethite and acetohydroxamic acid, a monohydroxamate ligand, suggested that the three hydroxamate groups in DFO-D1 coordinate to Fe(III) surface sites relatively independently. The results also demonstrated a significant depleting effect of 240 μM DFO-B or DFO-D1 on Pb(II) adsorption by goethite at pH > 6.5, but there was no effect of adsorbed Pb(II) on the goethite dissolution rate.     

Dissolution mechanisms of goethite in the presence of siderophores and organic acids

In dynamic natural systems such as soils and surface waters, transient biogeochemical processes can induce strong chemical non-steady-state conditions. In this paper, we investigate the effects of non-steady-state conditions on ligand-controlled iron oxide dissolution. The rates of goethite dissolution at pH 6 in the presence of low molecular weight organic acids (oxalate, citrate or malonate) were observed. Non-steady-state conditions were induced by rapid additions of fungal, bacterial or plant siderophores. In the presence of the low molecular weight organic acids, dissolved iron concentrations are below detection limit as predicted by equilibrium solubility calculations. The rapid addition of the siderophores triggered reproducible, fast dissolution of kinetically labile iron from the iron oxide surface. The same effect was observed upon rapid additions of high citrate concentrations to goethite-oxalate suspensions. The concentration of the labile iron pool at the mineral surface was a function of the surface concentration of the low molecular weight organic acids and of the reaction time before addition of the siderophores. Isotopic exchange with ⁵⁹Fe independently confirmed the existence of the labile iron pool before addition of the siderophore. A dissolution mechanism was elucidated that is consistent with these observations and with accepted models of ligand-controlled dissolution. We conclude that the fast dissolution reaction observed here is an important process in biological iron acquisition and that it is based on a general geochemical mechanism.     

Evidence for ligand hydrolysis and Fe(III) reduction in the dissolution of goethite by desferrioxamine-B

Desferrioxamine-B (DFOB) is a bacterial trihydroxamate siderophore and probably the most studied to date. However, the manner in which DFOB adsorbs at mineral surfaces and promotes dissolution is still under discussion. Here we investigated the adsorption and dissolution reactions in the goethite-DFOB system using both in situ infrared spectroscopic and quantitative analytical methods. Experiments were carried out at a total DFOB concentration of 1 μmol/m², at pH 6, and in the absence of visible light. Our infrared spectroscopic results indicated that the adsorption of DFOB was nearly complete after a 4-h reaction time. In an attempt to determine the coordination mode at the goethite surface, we compared the spectrum of adsorbed DFOB after a 4-h reaction time to the spectra of model aqueous species. However, this approach proved too simplistic in the case of such a complex ligand as DFOB, and we suggest that a more detailed investigation (IR in D₂O, EXAFS of adsorbed model complexes) is needed to elucidate the structure of the adsorbed siderophore. Between a 4-h and 4-day reaction time, we observed the growth of carboxylate stretching bands at 1548 and 1404 cm⁻¹, which are indicators of DFOB hydrolysis. Acetate, a product of DFOB hydrolysis at its terminal hydroxamate group, was quantified by ion chromatography. Its rate of formation was linear and nearly the same as the rate of Fe(III) dissolution. The larger hydrolysis product, a hydroxylamine fragment, was not detected by LC-MS. However, a signal due to the oxidized form of this fragment, a nitroso compound, was found to increase linearly with time, which is an indirect indication for Fe(III) reduction. Based on these findings, we propose that DFOB undergoes metal-enhanced hydrolysis at the mineral surface followed by the reduction of surface Fe(III). While Fe(II) was not detected in solution, this is likely because it remains adsorbed at the goethite surface or becomes buried in the goethite crystal by electron conduction. Taking into account the extent and similarity between the rates of hydrolysis and dissolution, we suggest that a reductive mechanism could play an important part in the dissolution of goethite by DFOB. This possibility has not been considered previously in the absence of light and at circumneutral pH.     

Effects of photoirradiation on the adsorption of dissolved organic matter to goethite

The effects of photoirradiation of dissolved organic matter (DOM) on its subsequent adsorption to the Fe(III)oxyhydroxide mineral goethite were investigated at 22°C in 0.10 mol L⁻¹ NaClO₄ solutions at pH 3.5 and 5.5, Photoirradiation of DOM decreased the abundance of high molecular-weight components and formed new lower molecular-weight components, including low molecular weight carboxylic acids (i.e., formic, malonic, and acetic acids). Adsorption of non-irradiated DOM decreased from pH 3.5 to 5.5 and was dominated by the intermediate molecular weight (1251-3750 Da) fraction, although the 451-1250 and 3751-11350 Da fractions also contributed to adsorption at pH 3.5. Irradiation resulted in a substantial decrease in DOM adsorption affinity at pH 3.5, primarily due to loss of components in the 1251-3750 and 3751-11350 Da fractions. Irradiation resulted in only a small decrease in DOM adsorption affinity at pH 5.5; the loss of components in the 3751-11350 Da fraction upon irradiation had little effect on adsorption because they played little or no role in the non-irradiated sample at this pH. Irradiation of DOM also affected its interactions with Fe in solution and the solution iron(II)/iron(III) speciation. The combined effects of irradiation followed by adsorption produced DOM that was lower in molecular weight and had a decreased UV-Vis absorptivity than either process, alone. Together, these two processes are likely to have important environmental consequences in terms of UV penetration of surface waters, contaminant mobility, and DOM bioavailability.     

Oxygen isotopes in synthetic goethite and a model for the apparent pH dependence of goethite-water O/O fractionation

Goethite synthesis experiments indicate that, in addition to temperature, pH can affect the measured value of the ¹⁸O/¹⁶O fractionation factor between goethite and water (α_G-W). A simple model was developed which expresses α_G-W in terms of kinetic parameters associated with the growth of goethite from aqueous solution. The model predicts that, at a particular temperature, the range of pH over which α_G-W changes as pH changes is expected to be comparatively small (∼3 pH “units”) relative to the range of pH values over which goethite can crystallize (pH from ∼1 to 14). Outside the range of sensitivity to pH, α_G-W is predicted to be effectively constant (for constant temperature) at either a low-pH α_G-W value or a high-pH α_G-W value. It also indicates that the values of α_G-W at high pH will be disequilibrium values. Values of α_G-W for goethite crystallized at low pH may approach, but probably do not attain, equilibrium values. For goethite synthesized at values of pH from ∼1 to 2, data from two different laboratories define the following equation for the temperature dependence of 1000 ln α_G-W (T in degrees Kelvin)

(IV)     

Influence of microbial hydroxamate siderophores on Pb(II) desorption from α-FeOOH

Siderophores are low-molecular weight organic molecules secreted by plants and micro-organisms in response to Fe stress. With stability constants commonly exceeding 10³⁰, siderophores are considered to have higher affinities for Fe(III) than for any other major or trace element dissolved in soil solution. However, several siderophores have affinities for trace metals that approach those for Fe(III), and certain actinides form siderophore complexes of surprisingly high stability. The purpose of this study was to examine the role of hydroxamate siderophores in controlling Pb sorption to an Fe(III) oxide adsorbent. Goethite [α-FeOOH], prepared by standard methods and identified by X-ray diffraction, gave a specific surface of 36 m² g⁻¹ as determined by N₂ multipoint BET analysis. Adsorption experiments were performed aseptically using a batch method with a goethite concentration of 1.0 g l⁻¹ and an ionic strength of 0.01 M NaClO₄. Soluble Pb and Fe were measured between pH 3 and 8 by first adding Pb (10 μM) and then siderophore (10, 20, or 40 μM) to the goethite suspension. Three hydroxamate siderophores were employed: desferrioxamine B (DFB), ferrichrome (FC), and rhodotorulic acid (RA). Following 20 h reaction, Pb and Fe in solution were measured by ICP–MS and ICP–AES, respectively. The efficacy of siderophore-mediated Pb desorption varied with siderophore type and generally increased with pH and siderophore/Pb molar ratio. Desferrioxamine B, at pH 6.5 and a DFB/Pb molar ratio of 4, solubilised nearly 25% of the total sorbed Pb. In the presence of 10 μM FC, Pb adsorption largely mimicked that for the siderophore-free system, whereas significant amounts of Pb were desorbed with 20 μM FC at pH >5.5. The dihydroxamate siderophore, RA, was the least effective Pb chelator, requiring 20 μM to desorb detectable amounts of Pb.     

Surface simulation studies of the hydration of white rust Fe(OH)2, goethite α-FeO(OH) and hematite α-Fe2O3

Computer modelling techniques were used to elucidate the hydration behaviour of three iron (hydr)oxide minerals at the atomic level: white rust, goethite and hematite. A potential model was first adapted and tested against the bulk structures and properties of eight different iron oxides, oxyhydroxides and hydroxides, followed by surface simulations of Fe(OH)₂, α-FeO(OH) and α-Fe₂O₃. The major interaction between the adsorbing water molecules and the surface is through interaction of their oxygen ions with surface iron ions, followed by hydrogen-bonding to surface oxygen ions. The energies released upon the associative adsorption of water range from 1 to 17 kJ mol⁻¹ for Fe(OH)₂, 26 to 80 kJ mol⁻¹ for goethite and 40 to 85 kJ mol⁻¹ for hematite, reflecting the increasing oxidation of the iron mineral. Dissociative adsorption at goethite and hematite surfaces releases larger hydration energies, ranging from 120 to 208 kJ mol⁻¹ for goethite and 76 to 190 kJ mol⁻¹ for hematite.The thermodynamic morphologies of the minerals, based on the calculated surface energies, agree well with experimental morphologies, where these are available. When the partial pressures required for adsorption of water from the gas phase are plotted against temperature for the goethite and hematite surfaces, taking into account experimental entropies for water, it appears that these minerals may well be instrumental in the retention of water during the cyclic variations in the atmosphere of Mars.     

Solubility and dissimilatory reduction kinetics of iron(III) oxyhydroxides: A linear free energy relationship

Rates of reduction of Fe(III) oxyhydroxides by the bacterium Shewanella putrefaciens were measured as a function of the bacterial density and the Fe(III) substrate concentration. The results show that an earlier reported positive correlation between the solubility products (^*K_so) and the maximum cell-specific reduction rates (v_max) of predominantly poorly crystalline Fe(III) oxyhydroxides also applies to insoluble and crystalline Fe(III) oxyhydroxides. The mineral solubilities were measured by a dialysis bag technique under acidic conditions (pH 1 up to 2.5) at 25 °C. Initial iron reduction rates by S. putrefaciens were determined in the presence of excess lactate as electron donor. In all cases, the microbial reduction rate exhibited saturation behavior with respect to the Fe(III) oxyhydroxide concentration. On a double logarithmic scale, the maximum rates v_max and the solubility products defined a single linear free energy relationship (LFER) for all the Fe(III) oxyhydroxides considered. The solubility provided a better predictor of v_max than the specific surface area of the mineral phase. A rate limitation by the electron transfer between an iron reductase and a Fe(III) center, or by the subsequent desorption of Fe²⁺ from the iron oxide mineral surface, are both consistent with the observed LFER.     

Fe isotopic fractionation during mineral dissolution with and without bacteria

Fe released into solution is isotopically lighter (enriched in the lighter isotope) than hornblende starting material when dissolution occurs in the presence of the siderophore desferrioxamine mesylate (DFAM). In contrast, Fe released from goethite dissolving in the presence of DFAM is isotopically unchanged. Furthermore, Δ⁵⁶Fe_{solution-hornblende} for Fe released to solution in the presence of ligands varies with the affinity of the ligand for Fe. The extent of isotopic fractionation of Fe released from hornblende also increases when experiments are agitated continuously. The Fe isotope fractionation observed during hornblende dissolution with organic ligands is attributed predominantly to retention of ⁵⁶Fe in an altered surface layer, while the lack of isotopic fractionation during goethite dissolution in DFAM is consistent with the lack of an altered layer. When a siderophore-producing soil bacterium is added to the system (without added organic ligands), Fe released to solution from both hornblende and goethite differs isotopically from Fe in the bulk mineral: Δ⁵⁶Fe_{solution-starting material} = −0.56 ± 0.19 (hornblende) and −1.44 ± 0.16 (goethite). Increased isotopic fractionation is attributed in this case to the fact that as bacterial respiration depletes the system in oxygen and aqueous Fe is reduced, equilibration between aqueous ferrous and ferric iron creates a pool of isotopically heavy ferric iron that is assimilated by bacterial cells. Adsorption of isotopically heavy ferrous iron (Fe(II) enriched in the heavier isotope) or precipitation of isotopically heavy Fe minerals may also contribute to observed fractionations.To test whether these Fe isotope signatures are recorded in natural systems, we also investigated extractions of samples of soils from which the bacteria were isolated. These extractions show variability in the isotopic signatures of exchangeable Fe and Fe oxyhydroxide fractions from one soil sample to another, but exchangeable Fe is observed to be lighter than Fe in soil Fe oxyhydroxides and hornblende. This observation is consistent with isotopically light Fe-organic complexes in soil pore water derived from the Fe-silicate starting materials in the presence of growing microorganisms, as documented in experiments reported here. The contributions from phenomena including organic ligand-promoted nonstoichiometric dissolution of Fe silicates, uptake of ferric iron by organisms, adsorption of isotopically heavy ferrous iron, and precipitation of iron minerals should create complex isotopic signatures in soils. Better understanding of these processes and the timescales over which they contribute to fractionation is needed.     

Formation and stability of schwertmannite in acidic mining lakes

Schwertmannite (ideal formula: Fe₈O₈(OH)₆SO₄) is typically found as a secondary iron mineral in pyrite oxidizing environments. In this study, geochemical constraints upon its formation are established and its role in the geochemical cycling of iron between reducing and oxidizing conditions are discussed. The composition of surface waters was analyzed and sediments characterized by X-ray diffraction, FTIR spectroscopy and determination of the Fe:S ratio in the oxalate extractable fraction from 18 acidic mining lakes. The lakes are exposed to a permanent supply of pyritegenous ferrous iron from adjacent ground water. In 3 of the lakes the suspended matter was fractionated using ultra filtration and analyzed with respect to their mineral composition. In addition, stability experiments with synthetic schwertmannite were performed. The examined lake surface waters were O₂-saturated and have sulfate concentrations (10.3 ± 5.5 mM) and pH values (3.0 ± 0.6) that are characteristic for the stability window of schwertmannite. Geochemical modeling implied that i) the waters were saturated with respect to schwertmannite, which controlled the activity of Fe³⁺ and sulfate, and ii) a redox equilibrium exists between Fe²⁺ and schwertmannite. In the uppermost sediment layers (1 to 5 cm depth), schwertmannite was detectable in 16 lakes—in 5 of them by all three methods. FTIR spectroscopy also proved its occurrence in the colloidal fraction (1-10 kDa) in all of the 3 investigated lake surface waters. The stability of synthetic schwertmannite was examined as a function of pH (2-7) by a 1-yr experiment. The transformation rate into goethite increased with increasing pH. Our study suggests that schwertmannite is the first mineral formed after oxidation and hydrolysis of a slightly acidic (pH 5-6), Fe(II)-SO₄ solution, a process that directly affects the pH of the receiving water. Its occurrence is transient and restricted to environments, such as acidic mining lakes, where the coordination chemistry of Fe³⁺ is controlled by the competition between sulfate and hydroxy ions (i.e. mildly acidic).     

铁氧化物矿物对苯酚和溶解性有机质表面吸附的初步研究

文中以铁氧化物矿物对苯酚和溶解性有机质(DOM)的吸附研究为例开展生态矿物学研究。铁氧化物矿物的吸附作用存在多种机制,这些吸附机制发生作用的条件主要取决于溶液化学性质和吸附质的理化性质。批处理实验研究表明,苯酚吸附在酸性微酸性条件下不强,吸附等温线符合Langmuir方程,属于表面分子吸附模型;DOM的吸附强并发生吸附分异,配体交换、憎水键和范氏力等多种模式并存,在酸性中性条件下对DOM在针铁矿上的吸附起着重要贡献。本文实验条件下DOM吸附等温线近于线性,不能采用Langmuir方程拟合,可能原因是DOM浓度较低。矿物表面荷电性对吸附影响显著,例如,当矿物表面净电荷为零(pH=pHpzc)时,矿物表面水化膜减薄甚至消失,苯酚分子、憎水DOM分子或片断都会倾向于在矿物表面上吸附。由于苯酚吸附机制单一,其受到的影响很明显,所以苯酚在pH值7～8范围内出现吸附最大值;由于配体交换作用主要发生在酸性微酸性条件下,所以在本文pH值约7.5的实验条件下,尽管配体交换仍在发生作用,但它不是主要吸附机制,针铁矿对DOM吸附的主要贡献应是憎水键和范氏力作用,此外,DOM吸附等温方程近于线性还可能与此有关。显然,铁矿物表面作用在对有机质含量低而铁矿物含量高的红壤中污染物和DOM的固定与归宿控制中扮演着重要的角色。     

The adsorption of aquatic humic substances by iron oxides

The interactions of humic substances from Esthwaite Water with hydrous iron oxides (α-FeOOH, α-Fe₂O₃, amorphous Fe-gel) have been examined by measuring adsorption isotherms and by microelectrophoresis. In Na⁺-Cl^?-HCO₃^?at I = 0.002 M (medium I) the extent of adsorption decreases with increasing pH. The results are consistent with a mechanism involving ligand exchange of humic anionic groups with H₂O and OH^?of surface Fe-OH₂⁺and Fe-OH groups respectively, with an increasing degree of protonation of the adsorbed humics as the adsorption density increases at constant pH.At pH 7 in a medium containing Mg²⁺, Ca²⁺ and SO₄^2?, at their Esthwaite Water concentrations and at I= 0.002 M (medium II) the adsorption capacity of goethite (α-FeOOH) is approximately twice that in medium I. Electrophoresis experiments show that the extra capacity is associated with coadsorption of Mg²⁺ and/or Ca²⁺ ions.When the iron oxides are added to samples of Esthwaite Water itself they become negatively charged and plots of electrophoretic mobility against pH for the natural water are identical to those in medium II plus humics.     

Structural constraints of ferric (hydr)oxides on dissimilatory iron reduction and the fate of Fe(II)

Due to the strong reducing capacity of ferrous Fe, the fate of Fe(II) following dissimilatory iron reduction will have a profound bearing on biogeochemical cycles. We have previously observed the rapid and near complete conversion of 2-line ferrihydrite to goethite (minor phase) and magnetite (major phase) under advective flow in an organic carbon-rich artificial groundwater medium. Yet, in many mineralogically mature environments, well-ordered iron (hydr)oxide phases dominate and may therefore control the extent and rate of Fe(III) reduction. Accordingly, here we compare the reducing capacity and Fe(II) sequestration mechanisms of goethite and hematite to 2-line ferrihydrite under advective flow within a medium mimicking that of natural groundwater supplemented with organic carbon. Introduction of dissolved organic carbon upon flow initiation results in the onset of dissimilatory iron reduction of all three Fe phases (2-line ferrihydrite, goethite, and hematite). While the initial surface area normalized rates are similar (∼10⁻¹¹ mol Fe(II) m⁻² g⁻¹), the total amount of Fe(III) reduced over time along with the mechanisms and extent of Fe(II) sequestration differ among the three iron (hydr)oxide substrates. Following 16 d of reaction, the amount of Fe(III) reduced within the ferrihydrite, goethite, and hematite columns is 25, 5, and 1%, respectively. While 83% of the Fe(II) produced in the ferrihydrite system is retained within the solid-phase, merely 17% is retained within both the goethite and hematite columns. Magnetite precipitation is responsible for the majority of Fe(II) sequestration within ferrihydrite, yet magnetite was not detected in either the goethite or hematite systems. Instead, Fe(II) may be sequestered as localized spinel-like (magnetite) domains within surface hydrated layers (ca. 1 nm thick) on goethite and hematite or by electron delocalization within the bulk phase. The decreased solubility of goethite and hematite relative to ferrihydrite, resulting in lower Fe(III)_aq and bacterially-generated Fe(II)_aq concentrations, may hinder magnetite precipitation beyond mere surface reorganization into nanometer-sized, spinel-like domains. Nevertheless, following an initial, more rapid reduction period, the three Fe (hydr)oxides support similar aqueous ferrous iron concentrations, bacterial populations, and microbial Fe(III) reduction rates. A decline in microbial reduction rates and further Fe(II) retention in the solid-phase correlates with the initial degree of phase disorder (high energy sites). As such, sustained microbial reduction of 2-line ferrihydrite, goethite, and hematite appears to be controlled, in large part, by changes in surface reactivity (energy), which is influenced by microbial reduction and secondary Fe(II) sequestration processes regardless of structural order (crystallinity) and surface area.     

The mechanism of cadmium surface complexation on iron oxyhydroxide minerals

Many sediment and soil systems have become significantly contaminated with cadmium, and earth scientists are now required to make increasingly accurate predictions of the risks that this contamination poses. This necessitates an improved understanding of the processes that control the mobility and bioavailability of cadmium in the environment. With this in mind, we have studied the composition and structure of aqueous cadmium sorption complexes on the iron oxyhydroxide minerals goethite (α-FeOOH), lepidocrocite (γ-FeOOH), akaganeite (β-FeOOH), and schwertmannite (Fe₈O₈(OH)₆SO₄) using extended X-ray adsorption fine structure spectroscopy. The results show that adsorption to all of the studied minerals occurs via inner sphere adsorption over a wide range of pH and cadmium concentrations. The bonding mechanism varies between minerals and appears to be governed by the availability of different types of adsorption site at the mineral surface. The geometry and relative stability of cadmium adsorption complexes on the goethite surface was predicted with ab initio quantum mechanical modelling. The modelling results, used in combination with the extended X-ray adsorption fine structure data, allow an unambiguous determination of the mechanism by which cadmium bonds to goethite.Cadmium adsorbs to goethite by the formation of bidentate surface complexes at corner sharing sites on the predominant (110) crystallographic surface. There is no evidence for significant cadmium adsorption to goethite at the supposedly more reactive edge sharing sites. This is probably because the edge sharing sites are only available on the (021) crystallographic surface, which comprises just ∼2% of the total mineral surface area. Conversely, cadmium adsorption on lepidocrocite occurs predominately by the formation of surface complexes at bi- and/or tridentate edge sharing sites. We explain the difference in extended X-ray adsorption fine structure results for cadmium adsorption on goethite and lepidocrocite by the greater availability of reactive edge sharing sites on lepidocrocite than on goethite. The structures of cadmium adsorption complexes on goethite and lepidocrocite appear to be unaffected by changes in pH and surface loading. There is no support for cadmium sorption to any of the studied minerals via the formation of an ordered precipitate, even at high pH and high cadmium concentration. Cadmium adsorption on akaganeite and schwertmannite also occurs via inner sphere bonding, but the mechanism(s) by which this occurs remains ambiguous.     

Coating a polystyrene well-plate surface with synthetic hematite,goethite and aluminium hydroxide for cell mineral adhesion studies in a controlled environment

Iron and aluminium oxides are available in many climatic regions and play a vital role in many environmental processes, including the interactions of microorganisms in contaminated soils and groundwater with their ambient environment. Indigenous microorganisms in contaminated environments often have the ability to degrade or transform those contaminants, a concept that supports an in situ remediation approach and uses natural microbial populations in order to bio-remediate polluted sites. These metal oxides have a relatively high pH-dependent surface charge, which makes them good candidates for studying mineral–bacterial adhesion. Given the importance of understanding the reactions that occur at metal oxide and bacterial cell interfaces and to investigate this phenomenon further under well-characterized conditions, some of the most common iron and aluminium oxides; hematite, goethite and aluminium hydroxide, were synthesized and characterized and a coating method was developed to coat polystyrene well-plates as a surface exposable to bacterial adhesion with these minerals (non-treated polystyrene-12 well-plates which are used for cell cultures). The coating process was designed in a way that resembles naturally coated surfaces in aquifers. Hematite, Fe₂O₃, was synthesized from acidic FeCl₃ solution, while goethite, FeOOH, and aluminium hydroxide, Al(OH)₃, were prepared from an alkaline solution of Fe(NO₃)₃ and Al(NO₃)₃. They were further characterized using X-ray diffraction (XRD), Fourier transform infrared (FTIR), potentiometric titration and contact angle measurements. Characterization results show that the pure phases of hematite, goethite and aluminium hydroxides are formed with a point of zero charge (PZC) of 7.5, 8.5 and 8.9, respectively. The coating process was based on the direct deposition of mineral particles from an aqueous suspension by evaporation. Then, altered polystyrene surface properties were analyzed using X-ray photoelectron spectroscopy (XPS), attenuated total reflection-Fourier transform infrared (ATR-IR), water drop contact angle measurements and vertical scanning interferometry (VSI). The surface analysis tests prove that the coated polystyrene surface has physicochemical properties that are similar to the reference synthetic hematite, goethite and aluminium hydroxide minerals. These prepared and well-characterized mineral well-plates are similar to naturally occurring surfaces in aquifers and enable us to study the different steps of bacterial adhesion and biofilm formation on these metal oxides under laboratory-controlled conditions.     

Surface oxidation of pyrite under ambient atmospheric and aqueous (pH = 2 to 10) conditions: electronic structure and mineralogy from X-ray absorption spectroscopy

The nature of the surface oxidation phase on pyrite, FeS₂, reacted in aqueous electrolytes at pH = 2 to 10 and with air under ambient atmospheric conditions was studied using synchrotron-based oxygen K edge, sulfur L_III edge, and iron L_II,III edge X-ray absorption spectroscopy. We demonstrate that O K edge X-ray absorption spectra provide a sensitive probe of sulfide surface oxidation that is complementary to X-ray photoelectron spectroscopy. Using total electron yield detection, the top 20 to 50 Å of the pyrite surface is characterized. In air, pyrite oxidizes to form predominantly ferric sulfate. In aqueous air-saturated solutions, the surface oxidation products of pyrite vary with pH, with a marked transition occurring around pH 4. Below pH = 4, a ferric (hydroxy)sulfate is the main oxidation product on the pyrite surface. At higher pH, we find iron(III) oxyhydroxide in addition to ferric (hydroxy)sulfate on the surface. Under the most alkaline conditions, the O K edge spectrum closely resembles that of goethite, FeOOH, and the surface is oxidized to the extent that no FeS₂ can be detected in the X-ray absorption spectra. In a 1.667 × 10⁻³ mol/L Fe³⁺ solution with ferric iron present as FeCl₃ in NaCl, the oxidation of pyrite is autocatalyzed, and formation of the surface iron(III) oxyhydroxide phase is promoted at low pH.     

Sorption of ferric iron from ferrioxamine B to synthetic and biogenic layer type manganese oxides

Siderophores are biogenic chelating agents produced in terrestrial and marine environments that increase the bioavailability of ferric iron. Recent work has suggested that both aqueous and solid-phase Mn(III) may affect siderophore-mediated iron transport, but scant information appears to be available about the potential roles of layer type manganese oxides, which are relatively abundant in soils and the oligotrophic marine water column. To probe the effects of layer type manganese oxides on the stability of aqueous Fe-siderophore complexes, we studied the sorption of ferrioxamine B [Fe(III)HDFOB⁺, an Fe(III) chelate of the trihydroxamate siderophore desferrioxamine B (DFOB)] to two synthetic birnessites [layer type Mn(III,IV) oxides] and a biogenic birnessite produced by Pseudomonas putida GB-1. We found that all of these predominantly Mn(IV) oxides greatly reduced the aqueous concentration of Fe(III)HDFOB⁺ at pH 8. Analysis of Fe K-edge EXAFS spectra indicated that a dominant fraction of Fe(III) associated with the Mn(IV) oxides is not complexed by DFOB as in solution, but instead Fe(III) is specifically adsorbed to the mineral structure at multiple sites, thus indicating that the Mn(IV) oxides displaced Fe(III) from the siderophore complex. These results indicate that layer type manganese oxides, including biogenic minerals, may sequester iron from soluble ferric complexes. We conclude that the sorption of iron-siderophore complexes may play a significant role in the bioavailability and biogeochemical cycling of iron in marine and terrestrial environments.     

Cell adhesion of <Emphasis Type="Italic">Shewanella oneidensis</Emphasis>to iron oxide minerals: Effect of different single crystal faces

The results of experiments designed to test the hypothesis that near-surface molecular structure of iron oxide minerals influences adhesion of dissimilatory iron reducing bacteria are presented. These experiments involved the measurement, using atomic force microscopy, of interaction forces generated between Shewanella oneidensis MR-1 cells and single crystal growth faces of iron oxide minerals. Significantly different adhesive force was measured between cells and the (001) face of hematite, and the (100) and (111) faces of magnetite. A role for electrostatic interactions is apparent. The trend in relative forces of adhesion generated at the mineral surfaces is in agreement with predicted ferric site densities published previously. These results suggest that near-surface structure does indeed influence initial cell attachment to iron oxide surfaces; whether this is mediated via specific cell surface-mineral surface interactions or by more general interfacial phenomena remains untested.     

Long-term continuous in situ potentiometrically measured redox potential in anoxic groundwater with high methane and iron contents

The in situ redox potential (Eh) in anoxic groundwater with high methane and iron contents (approximately 12.3 and 28.4 mg/L, respectively) was potentiometrically measured to identify the processes that control Eh. The measured Eh ranged from −213 to −187 mV; it had an inverse correlation with the concentration of methane and no correlation with that of iron. The saturation indices indicate that goethite and amorphous FeS were nearly at solubility equilibrium. A comparison of the measured Eh with those calculated for the particular redox pairs indicates that either Fe²⁺/FeOOH or CH₄/CO₂, but not sulfur redox pairs, controlled the measured Eh. The inverse relationship between measured Eh and methane concentration suggests possible control of the redox conditions by the CH₄/CO₂ redox pair. Furthermore, the equilibrium solubility state of goethite, which has higher crystallinity and lower solubility than Fe(OH)₃ indicates that the iron reaction was electrochemically irreversible. This further supports the contribution of the CH₄/CO₂ pair to controlling the measured Eh of groundwater.     

Siderophore-promoted dissolution of cobalt from hydroxide minerals

Recent research has revealed that siderophores, a class of biogenic ligands with high affinities for Fe(III), can also strongly complex Co(III), an element essential to the normal metabolic function of microbes and animals. This study was conducted to quantify the rates and identify the products and mechanisms of the siderophore-promoted dissolution of Co from synthetic Co-bearing minerals. The dissolution reactions of heterogenite (CoOOH) and four Co-substituted goethites (Co-FeOOH) containing different Co concentrations were investigated in the presence of a trihydroxamate siderophore, desferrioxamine B (DFOB), using batch and flow-through experiments. Results showed that DFOB-promoted dissolution of Co from Co-bearing minerals may occur via pH-dependent ligand-promoted or reductive dissolution mechanisms. For heterogenite, ligand-promoted dissolution was the dominant pathway at neutral to alkaline pH, while production of dissolved Co(II) for pH <6. It was not possible from our data to decouple the separate contributions of homogenous and heterogeneous reduction reactions to the aqueous Co(II) pool. Cobalt substitution in Co-substituted goethite, possibly caused by distortion of goethite structure and increased lattice strain, resulted in enhanced total dissolution rates of both Co and Fe. The DFOB-promoted dissolution rates of Co-bearing minerals, coupled with the high affinity of Co(III) for DFOB, suggest that siderophores may be effective for increasing Co solubility, and thus possibly Co bioavailability. The results also suggest that siderophores may contribute to the mobilization of radioactive ⁶⁰Co from Co-bearing mineral phases through mineral weathering and dissolution processes.