江蓠属海藻龙须菜的基础研究与大规模栽培

江蓠属的龙须菜是1种重要的产琼胶海藻。从2000年在广东汕头南澳岛栽培成功以来,迅速在福建、浙江、山东和辽宁沿海得到发展,成为继海带、紫菜和裙带菜之后又一个新兴的海藻栽培产业群。本文综述了龙须菜遗传学研究成果及龙须菜栽培产业建立和发展的关键因素,包括龙须菜南移栽培,981龙须菜良种培育的技术要点。     

丛粒藻形态多样性与遗传多样性研究

观察了采集自不同地点的3株丛粒藻(Botryococcus braunii)(AGB-Bb01、AGB-Bb02和AGB-Bb03)的显微结构和亚显微结构,以18S rDNA和ITS区序列为目标位点比较分析了16株丛粒藻藻株的遗传距离和序列相似性,重建了系统发生树。结果表明:丛粒藻不同地理株在细胞大小、聚落大小和聚落细胞数目方面存在较明显的差异,亚显微结构显示不同藻株的杯状鞘厚度及细胞包埋程度也存在差异;不同地理株间具有较高的遗传多样性,系统发生树显示所有藻株可分成2个簇群和4个亚群,存在一定程度的地理隔离。研究证明了18S rDNA和ITS区序列是进行丛粒藻基因分型和遗传多样性研究的良好位点。本研究为系统了解丛粒藻的遗传多样性和开展优良藻株选育工作奠定了基础。     

Dispersal, Genetic Differentiation and Speciation in Estuarine Organisms

For some of their occupants, estuaries represent spatially discrete habitats, isolated from each other by barriers to dispersal or physiological tolerance. We present contrasting strategies for the retention or export of larvae from their estuary of origin, and consider the implications these have on population structure and divergence. Reported patterns of genetic differentiation and inferred gene flow in estuarine taxa (principally animals) are reviewed, and difficulties in the interpretation of existing genetic data discussed. Species concepts and models of speciation relevant to estuaries are outlined, and patterns of speciation of estuarine taxa reviewed. It is concluded that estuarine environments tend to restrict gene flow and impose distinct selective regimes, generating physiologically adapted populations divergent from their marine counterparts, and the potential for in situ speciation in complete or partial isolation. The resulting taxa may represent sibling or cryptic species groups of truly estuarine origin, rather than simply estuarine populations of marine eurytopes.     

Induction Effect and Genetic Analysis of NG to Conchospores of Porphyra

The new spreading conchospores ot Porphyra yezoensis, P. haitanensis and P. katadai var. hemiphylla are induced by N-Methy-N‘-Nitro-N-Nitrosoguanidine (NG), a strong mutagen to induce the mutant of chromatophore. It is showed that (1) no mutants have been investigated in all control group. (2)The conchospores of all the three species of Porphyra are easy to be induced by NG for they are in the stage of breeding, In the lowest dose (10 μ g/mL) of this experiment, the mutant rate of P. yezoensis is up to 57.9%, that of P. haitanensis 30.7% and that of P. katadai var. hemiphylla 51.7%. (3)The mutant rate can not increase obviously by increasing the reagent concentration or prolonging the induction time. Within the scope of experiment, the inducement effects of three species of Porphyra ar e much similar, and the mutant rate is near 50%. The optimum induction concentration of NG is 10 μ g/mL, and the optimum induction time is 30 minutes.     

Genetic variation and population structure in the New Zealand snapper

Fifteen proteins encoded by 23 gene loci were electrophoretically surveyed in two samples of snapper Chrysophrys auratus (Forster) from Wellington Harbour and the Hauraki Gulf. Between 17% and 26% of the loci examined were found to be polymorphic and the proportion of heterozygous loci per individual was 7.9% to 8.4%. Using Rogers’ genetic distance coefficient an overall similarity of 0.98 was calculated between the two samples.

Three polymorphic loci Est‐4, Gpi‐1, and Idh were examined in an additional 10 samples from around New Zealand. Two genetically distinct stocks were apparent: one along the west coast, the other along the east coast of the North Island. There was an indication of stock mixing at Ninety Mile Beach and in the Bay of Plenty and East Cape. The distribution of alleles at the Est‐4 locus revealed a third stock in Hawke Bay that is genetically more similar to the west coast than the east coast stock. Hydrological conditions in Hawke Bay are more similar to those of the west coast than to those of the north east coast of the North Island. Thus it is possible that Est‐4 alleles are selectively maintained in response to an environmental factor.     

Induction Effect and Genetic Analysis of NG to Thallus of Porphyra

The young thalli of Porphyra yezoensis and P. haitanensis are induced by N-Methy-N‘-Nitro-N-Nitrosoguanidine (NG), a strong mutagen to induce the mutant of chromatophore. It is showed that no mutants have been investigated in all control groups,while in the induced groups, it is easy to find mutant cells or mutant cell masses in the thallus.The pigmentation mutants may be the result of NG inducement. The mutant rate increases obviously with the mutagen concentration or by prolonging the induction time. Within the scope of experiment, the inducement effects of Porphyra yezoensis are raised from 11.2% to 28.7%, and those of P. haitanensis from 10.1% to 20.2%. According to our experiments, the amount of mutant cells in the same area does not increase with the induction intensity The amount of mutant cells in every group of inducement of both species of Porphyra changes very little with the fixed fields check method. The lowest dose (25μg/mL) of this experiment has a high mutant rate. The mutant rate shows the percentage of mutant cells in all the survived cells, while the amount of mutant cells reflects the effect of inducement. Thus the optimum induction concentration of NG is 25μg/mL, and the optimum induction time is 30minutes.     

裙带菜的孤雌生殖及其后代的遗传特点

若干海藻工作者已在海带、厚叶翅藻等褐藻中观察到孤雌生殖的现象[1][3][4]。我们于1973年开始了海带单倍体遗传育种的实验后,从1974年起我们就裙带菜(Undaria pinnatifida Sur.)进行了相似的试验。这里着重就裙带菜的孤雌生殖及其后代所表现的细胞遗传学特点,进行一些观察。大部分材料是1977年的实验结果。关于裙带菜配子体的无性生殖系将另作总结。     

虫黄藻的分类和遗传多样性研究进展

综述了虫黄藻的分类研究,其中与造礁石珊瑚共生的虫黄藻主要是共生藻属(Symbiodinium)的种类,重点概述了共生藻的分类和遗传多样性研究进展,特别综述了分子生物学技术在造礁石珊瑚共生藻的分类和遗传多样性方面的研究近况,并对未来共生藻的分类和遗传多样性研究作了展望.目前多采用分子生物学手段进行共生藻的分类和遗传多样性研究,PCR-RFLP是解决共生藻系群水平分类的有效分子标记,而DNA序列分析是目前进行共生藻分子进化和系统发育研究最有效的方法.目前应用于共生藻分子系统发生研究的DNA信息主要为核糖体RNA.对共生藻进行分类和遗传多样性研究,将有助于理解造礁石珊瑚共生藻共生系统对外界环境变化的生态响应机制.     

Geoacoustic Inversion via Genetic Algorithm and Its Application to Manganese Sediment Identification

An acoustic inversion method using a wide-band signal and two near field receivers is proposed and applied to multiple layered seabed models including a manganese sediment. The inversion problem can be formulated into a probabilistic model comprised of signals, a forward model, and additive noise. The forward model simulates wide-band signals, such as chirp signals, and is chosen to be the source-waveletconvolution plane wave modeling method. The wavelet matching technique, using weighted least-squares fitting, estimates the sediment sound-speed and thickness on which determination of the possible numerical ranges for a priori uniform distribution is based. The genetic algorithm is applied to a global optimization problem to find a maximum a posteriori solution for determined a priori search space. Here the object function is defined by an L 2 norm of the difference between measured and modeled signals. Not only the marginal pdf but also its statistics are calculated by numerical evaluation of integrals using the samples selected during importance sampling process of the genetic algorithm.     

Geoacoustic Inversion via Genetic Algorithm and Its Application to Manganese Sediment Identification

Abstract

An acoustic inversion method using a wide-band signal and two near field receivers is proposed and applied to multiple layered seabed models including a manganese sediment. The inversion problem can be formulated into a probabilistic model comprised of signals, a forward model, and additive noise. The forward model simulates wide-band signals, such as chirp signals, and is chosen to be the source-wavelet-convolution plane wave modeling method. The wavelet matching technique, using weighted least-squares fitting, estimates the sediment sound-speed and thickness on which determination of the possible numerical ranges for a priori uniform distribution is based. The genetic algorithm is applied to a global optimization problem to find a maximum a posteriori solution for determined a priori search space. Here the object function is defined by an L₂ norm of the difference between measured and modeled signals. Not only the marginal pdf but also its statistics are calculated by numerical evaluation of integrals using the samples selected during importance sampling process of the genetic algorithm.     

Genetic Algorithms of Structural Fuzzy Reliability Index

In this paper the simple generation algorithms are improved.According to the geometricmeaning of the structural reliability index,a method is proposed to deal with the variables in the standardnormal space.With consideration of variable distribution,the correlation coefficient of the variables andits fuzzy reliability index,the feasibility and the reliability of the algorithms are proved with an example ofstructural reliability analysis and optimization.     

一种新型混沌遗传优化算法的研究

在对遗传算法交叉、变异后结果的处理方法进行改进并在将进化过程分段的基础上,提出1种新的混沌遗传算法。该算法利用混沌运动的遍历性择优产生初始群体,对每一轮遗传操作所得到的部分当前最优个体进行变尺度混沌搜索。仿真结果表明,该算法具有较高的优化效率,并能求得全局最优解。     

Genetic diversity and differentiation of mud crab Scylla serrata populations from southeastern China

The genetic diversity and differentiation of 6 mud crab Scylla serrata populations from southeastern China are investigated using allozyme electrophoresis. The mean number of alleles per locus population is 1.3 ± 0.1; the percentage of polymorphic loci per population is 27.3; the observed heterozygosity ranges from ( 0.195 ± 0.083)to ( 0.241 ± 0.090) and the expected heterozygosity ranges from ( 0.105 ± 0.043 ) to ( 0.131 ± 0.047 ). The coefficient of gene differentiation among populations is low (Fst =0.032), indicating that only 3.2 % of the total genetic diversity comes from inter-population, while the remaining 96.8 % comes from intra-population differences.The genetic distance among populations is 0.000～0.008 (the average is 0.002). Gene flow among the populations is large (Nm= 7.56).Genetic structure is very similar among 6 Scylla serrata populations.     

基于ICP和模拟退火遗传算法的DEM无控匹配

为对DEM进行分析、管理和应用,有必要对DEM匹配技术进行研究。为此,提出一种基于ICP和模拟退火遗传算法的多源DEM无控匹配方法,利用扫描线生成DEM的点云并利用ICP进行粗匹配,并利用模拟退火遗传算法对参数精求解。实验结果表明,算法可以完成多源DEM的无控制匹配,运行效率优于遗传算法,求解精度优于ICP算法。     

皱纹盘鲍野生与养殖群体遗传多样性的研究

用随机扩增多态DNA（RAPD）技术,对山东长岛（CW）、辽宁大连（DW）两个野生群体和山东崆峒岛（KC）一个养殖群体的皱纹盘鲍遗传多样性进行了分析.结果表明,CW和DW群体间的遗传距离为0.170 3,CW和KC群体间的遗传距离为0.367 3,DW和KC群体间的遗传距离为0.347 7,显示野生群体与养殖群体之间的亲缘关系已发生了变化.CW,DW和KC三个群体的多态位点比例分别为49.22%、50.78%和43.75%;平均杂合度分别为0.350 6,0.340 8和0.307 9.与野生群体相比,养殖群体的多态位点比例和杂合度都有不同程度的降低.     

坛紫菜品系间遗传差异的RAPD分析

利用RAPD技术对六个坛紫菜品系进行了研究,从107条随机引 物中筛选10条随机引物,一共扩增出93条可重现的片段。经统计分析,六个品系间的遗传相 似系数在0.246～0.636之间。其中浙江北部沿海栽培品系间的相似系数最高为0.636.地 域间品系的遗传相似系数最低为0.246。六个品系用UPGMA方法得到的聚类关系符合传统的地 域和表型关系。通过对照品系间有稳定差异的DNA条带,表明RAPD标记是坛紫菜品系鉴定和 遗传多样性分析的有效手段。     

Optimization Design of Fairings for VIV Suppression Based on Data-Driven Models and Genetic Algorithm

Vortex induced vibration(VIV)is a challenge in ocean engineering.Several devices including fairings have been designed to suppress VIV.However,how to optimize the design of suppression devices is still a problem to be solved.In this paper,an optimization design methodology is presented based on data-driven models and genetic algorithm(GA).Data-driven models are introduced to substitute complex physics-based equations.GA is used to rapidly search for the optimal suppression device from all possible solutions.Taking fairings as example,VIV response database for different fairings is established based on parameterized models in which model sections of fairings are controlled by several control points and Bezier curves.Then a data-driven model,which can predict the VIV response of fairings with different sections accurately and efficiently,is trained through BP neural network.Finally,a comprehensive optimization method and process is proposed based on GA and the data-driven model.The proposed method is demonstrated by its application to a case.It turns out that the proposed method can perform the optimization design of fairings effectively.VIV can be reduced obviously through the optimization design.     

牙鲆野生群体与养殖群体的遗传多样性分析

利用AFLP技术对荣成野生群体和养殖群体牙鲆进行遗传多样性分析和比较。实验采用 7对引物组合在 2个群体中共扩增出 797个位点 ,其中多态位点数为 43 3个 ,占总位点数的 5 4.2 7%。各引物组合在 2个群体中的扩增位点数目和多态位点比例有较大不同 ,但养殖群体的总扩增位点数和多态位点比例均低于野生群体 ,野生群体和养殖群体的平均多态位点率分别为 46.18%和 40 .0 7% ,其中 ,E3 8M 5 0引物组合在两群体中扩增的多态位点比例差异显著 (P <0 .0 5 )。养殖群体中低频位点明显减少而隐性纯合基因位点显著增加。群体遗传结构分析表明 ,两群体间的遗传距离比较小 ,群体遗传结构相似 ,说明养殖群体尚没有形成自己独立的遗传结构。     

蟹类微卫星DNA标记的筛选及其在遗传学研究中的应用

微卫星DNA标记是近年来最受研究者青睐的分子标记之一.由于其具有高度多态性、共显性遗传、基因组中含量丰富且随机分布等特点,已被应用于种群分化研究、亲缘分析、基因连锁分析、进化以及生态学研究等许多领域.近年来,蟹类微卫星的研究报道日益增多.文中对蟹类微卫星分离方法、引物设计、遗传学特性以及在种群遗传、家系分析、遗传多样性评价等方面的最新研究进展进行综述,并分析微卫星分析中无效等位基因(null allele)、"结巴"带(stutter bands)和上游等位基因"扩增丢失"现象(upper allelic dropout)的产生原因以及对微卫星基因型判读带来的影响.     

自适应遗传算法解决集装箱装载问题的方法探讨

集装箱装箱问题是1个有很强应用背景的组合优化问题，约束条件多，求解极为困难。本文探讨了自适应遗传算法在复杂集装箱装载问题中的应用，算法中采用跨世纪精英选择策略保持了群体的多样性，并给出了有效的解码算法。实例仿真结果显示出很好的效果，同等条件下求解结果比使用启发式算法高出近10个百分点，表明该算法是行之有效的。