Spectral contributions of the components of seawater to the beam attenuation coefficient in surface waters of the Mediterranean Sea

We compute model spectra of the beam attenuation coefficient in surface waters of the Mediterranean Sea. These spectra are used to determine the contribution of the components of seawater (suspended matter, yellow substance, pigments of phytoplankton, and pure water) to the beam attenuation coefficient in different types of seawater. For the surface waters, we establish the relationship between the light scattering coefficient and the attenuation coefficient at a wavelength of 547 nm and determine the background (limiting minimum) value of the coefficient of absorption by the yellow substance in waters of the Mediterranean Sea. It is compared with the values of the same parameter for some other basins (Black Sea, Lake Baikal, Baltic Sea, and oceanic waters).     

胶州湾浮游植物遗传多样性及其季节变化研究

分别于春、夏、秋三季提取了胶州湾浮游生物总DNA,用PCR方法扩增了浮游植物核酮糖1,5-二磷酸羧化/氧化酶大亚基(rbcL)基因片段,构建了三季节rbcL基因片段质粒文库.随机从各文库中选择约50个克隆,测定了这些克隆的序列.以氨基酸序列相同为标准,共获得59个分类操作单元(OTUs),其中春季特有的21个,夏季特有的13个,秋季特有的23个.有两个OTUs为春、夏季表层海水共有.基于OTU丰度计算的香农氏指数能反映遗传多样性水平.胶州湾春、夏、秋三季的香农氏指数分别为2.69,2.44和2.76,表明秋季胶州湾浮游植物遗传多样性最丰富.春、夏、秋三季浮游植物群落组成差异显著.除夏秋季有两个OTUs相同外,其他OTUs在季节间完全不同.表层海水浮游植物群落结构是动态的,随时间、空间的不同而变化.     

珠江口藻华水体总吸收系数的变化特性及高光谱反演模式

基于2007年8月海洋光学浮标在珠江口投放期间获得的近16天的实测生物光学数据, 对一次藻华过程中水体总吸收系数和水色光谱的变化特性及其相互关系进行了研究。结果表明, 藻华前后水体中非藻类物质尤其是有色溶解有机物在蓝光波段具有较强的吸收贡献, 而当藻华爆发时, 随着叶绿素a浓度的急剧增大, 浮游植物的吸收贡献明显增强; 各波段之间总吸收系数呈现出较好的线性相关关系, 吸收光谱蓝绿波段比值的变化对遥感反射率的光谱分布有重要的贡献; 据此建立了对水体总吸收系数反演的经验关系模型, 表现出较高的反演精度, 计算值与实测值之间相对偏差的均方根在可见光波段可控制在24%以内。     

Genetic diversity and its seasonal variation of Jiaozhou Bay phytoplankton determined by rbcL gene sequencing

1 IntroductionRibulose-1, 5-bisphosphatecarboxylase/oxyge-nase(RubisCO)isthem ostim portantenzymeforpho-tobiosynthesis. Itcatalyzesboth thereduction ofCO2and the oxygenolysisofribulose-1, 5-bisphosphate.Asthemostabundantproteinonearth (Ellis, 1979),RubisC…     

由粒子吸收光谱提取浮游植物吸收光谱的人工神经网络方法

基于现场实验数据集及人工神经网络技术,论文提出了一种从海中粒子吸收光谱提取浮游植物吸收光谱的方法。这个数据集包含了海中粒子吸收光谱和对应的浮游植物吸收光谱,并被分为三个子集:训练集、印证集和试验集。本研究所利用的人工神经网络系统为多层感知器,训练后的人工神经网络的性能由印证集和试验集来评价。实验结果表明,文中所提出的方法可成功地提取浮游植物的吸收光谱,其提取精度与传统的实验方法相当。     

夏季外海水入侵对大亚湾浮游植物群落结构的影响

夏季大亚湾存在由粤东沿岸上升流所引起的外海水入侵现象,且入侵强度存在年际差异,作者利用大亚湾2004～2017年历年夏季航次调查数据,将弱入侵年份与强入侵年份进行对比分析,以探讨外海水入侵对大亚湾浮游植物群落结构的影响。结果显示,当外海水入侵由弱变强时,湾内水体理化特征发现显著变化,水体由高温低盐转变为低温高盐,N、P等营养盐含量出现下降。海水理化性质的改变导致了浮游植物群落结构的变化,硅藻、甲藻种类数以及浮游植物Shannon-wiener指数均出现升高;浮游植物总丰度和硅藻丰度下降,甲藻丰度变化不明显;常见浮游植物种类伪菱形藻属(Pseudo-nitzschiasp.)、角毛藻属(Chaetocerossp.)和叉角藻(Ceratiumfurca)丰度出现下降,而中肋骨条藻(Skeletonemacostatum)和菱形海线藻(Thalassionemanitzschioides)丰度出现升高;优势种由单一硅藻种类向硅藻和甲藻共为优势转变。此外,外海水入侵还会通过改变海水理化因子的空间分布以及湾内上层水体流向来影响浮游植物群落结构的空间分布。     

用多层感知器模型由吸收光谱反演浮游植物色素

浮游植物吸收光谱已逐渐成为高光谱水色遥感的可获取参量。文章采用了多层感知器模型, 由珠江口担杆群岛附近水体的浮游植物吸收光谱进行了色素浓度的反演, 感知器的输入量是浮游植物吸收光谱, 输出量分别对应叶绿素a、叶绿素b、叶绿素c、光保护类胡萝卜素和非光保护类胡萝卜素五大类主要色素的浓度。分析结果表明, 叶绿素a和叶绿素c估算结果的平均相对偏差比较低, 在测试数据集中两者的偏差分别为19.06%和15.90%; 光保护类胡萝卜素和非光保护类胡萝卜素的估算浓度的相对偏差比较高, 对于测试数据而言, 分别为37.62%和36.96%; 叶绿素b浓度在测试数据集中的估算相对偏差约为27.47%。五大类色素在测试数据集和训练数据集的估算偏差比较接近, 已训练好的多层感知器可用于担杆岛水体中色素信息的反演。同时, 此色素反演方法也为遥感监测水体浮游植物种群动态提供了重要的手段。     

Latitudinal and Vertical Distributions of Phytoplankton Absorption Spectra in the Central North Pacific during Spring 1994

Vertical changes of phytoplankton absorption spectra along 175°E from 48°N to 15°S were examined during spring 1994. The absorption spectra were analyzed using three different approaches; averaging the spectra within same oceanic areas, EOF analysis, and multiple regression analysis. Average spectra showed differences in five oceanic areas; subarctic, Kuroshio, subtropical surface, equatorial surface, and subtropical and equatorial subsurface areas. The distributions of the EOF mode of the variance of absorption spectra and of the pigments estimated by the multiple regression analysis indicated consistent differences of the spectra between those areas. Kuroshio water contains highest chlorophyll a concentrations and low chlorophyll-a-specific absorption spectra, and this may be caused by the package effect with large phytoplankton cell and by low concentrations of photo-protected carotenoids. Subtropical and equatorial subsurface water showed high absorption at 480 nm and indicated the effects of chlorophyll b. Absorption of the subsurface phytoplankton also showed a shift of the blue peak, possibly caused by the presence of divinyl-chlorophyll a. The consistency of the three different analytical methods indicates that the phytoplankton absorption includes significant information on pigment composition along a north-south vertical section of the central North Pacific.     

南海北部藻类粒级结构及色素成分对浮游植物吸收系数的影响

在珠江口、广东沿岸及南海北部三个航次生物-光学数据的基础上,研究了色素打包效应和色素成分的变化对浮游植物吸收系数的影响,结果表明,两种因素对吸收系数都有较大的贡献,但在不同的水体它们的影响程度各有不同.对网采浮游植物含量较高的珠江口和广东沿岸的水体而言,色素打包效应较强,对675 nm处比吸收系数的贡献平均分别为40%和20%;对微型浮游植物占主导地位的南海北部航次的水体,打包效应较弱,对675 nm处比吸收系数的影响平均仅为6%.采用多元线性回归的方法对吸收光谱进行分析,发现除叶绿素a之外的辅助色素对吸收系数的贡献主要表现在蓝绿光波段,三个航次440 nm波长处对总吸收的贡献平均分别为44%,43%和53%,其中对珠江口和广东沿岸航次的水体主要是光合类胡萝卜素的吸收贡献,而对南海北部航次的水体除了光合类胡萝卜素以外还要受到光保护类胡萝卜素的影响.由于河口、近岸和外海水体藻类粒级结构和辅助色素成分对浮游植物吸收系数的贡献有明显的差异,在南海北部水体建立比较精确的生物光学模型时,需考虑藻类粒级结构及色素成分对浮游植物吸收系数的影响.     

Variability of phytoplankton absorption in the northern South China Sea: influence of the size structure and pigment composition of algal populations

Data from three cruises conducted in the Zhujiang River (ZR), coastal waters of Guangdong (CWGD) and the northern South China Sea (NSCS) during 2003 and 2004 were examined for assessing the relative importance of pigment composition and packaging effect in modifying the specific absorption coefficients of phytoplankton. The three survey regions differ widely in their phytoplankton community with large cells dominating the ZR and CWGD waters and small cells dominating the NSCS region. Variations in the size structure and the accessory pigments have much effect on the chlorophyll a-specific absorption coefficient of phytoplankton. The size index accounted for about 42% and 33% of the variation of the specific absorption coefficient at 440 and 675 nm, respectively. Using the multiple regression analysis approach, pigment concentrations for each sample were calculated. The accessory pigments other than chlorophyll a contribute to absorption mainly in the blue-to-green region of the spectrum and their absorptions account for about 44%, 43% and 53% on the average of the total phytoplankton absorption at 440 nm for the ZR, CWGD and NSCS regions. Among the accessory pigments, the photosynthetic carotenoids (noted PSC) play a dominant role in the ZR and CWGD waters, while in the NSCS the nonphotosynthetic carotenoids (noted PPC) as well as PSC have important contributions. Because the variations of both the size structure and accessory pigments in algal populations contributed to the variability of the specific absorption coefficient in the study regions, these factors may be considered explicitly in future bio-optical algorithms to derive chlorophyll a concentration more accurately.     

Retrieving of the biooptical characteristics of Black-Sea waters under the conditions of constant reflectance at a wavelength of 400 nm

We consider a method used for the solution of the inverse problem of biooptics of the sea according to the spectrum of upwelling radiation and propose a procedure for the correction of the data of measurement by fixing the value of reflectance at a wavelength of 400 nm. The influence of this assumption on the results of retrieving of the concentrations of admixtures in seawater is analyzed. The computed values of the concentration of chlorophyll correspond to the data of direct biological measurements, and the reconstructed spectra of the absorption coefficient of phytoplankton have local maxima typical of biological particles. The applied correction allows us to decrease the influence of measurement errors on the results of retrieving and to increase the stability of solution of the inverse problem. __________ Translated from Morskoi Gidrofizicheskii Zhurnal, No. 1, pp. 38–50, January–February, 2008.     

The proportions and variations of the light absorption coefficients of major ocean color components in the East China Sea

The East China Sea (ECS),one of the largest continental seas,has dynamic hydrology and complex optical characteristics that make ocean color remote-sensing retrieval difficult.The distributions and proportions of the light absorption coefficients of major ocean color components based on two large-scale investigations in the ECS are presented,showing these features in typical summer and winter seasons.The absorption coefficient a CDOM,a NAP and a phy of colored dissolved organic matter,non-algal particle,and pigment of phytoplankton show a decreasing trend from the coast to the outer shelf.According to the a CDOM distribution at 440 nm,the Changjiang River plume shows an abnormal southeastward transport.An extremely high a NAP value patch at 440 nm is present in the middle coast.The chlorophyll-a-specific phytoplankton pigment absorption (a phy) is much higher in winter than in summer,which may cause serious underestimated results when applying the averaged a phy into remote-sensing algorithms for chlorophyll concentration retrieval.The importance of phytoplankton size was evident in outer shelf waters.The absorption of a CDOM (440) is a dominant component accounting for over half of the total seawater absorption in summer.The a NAP (440) accounts for 64% of the absorption of the ECS coastal area in winter.     

Gaussian decomposition and component pigment spectral analysis of phytoplankton absorption spectra

The absorption spectrum of phytoplankton is an important bio-optical parameter for ocean color hyperspectral remote sensing;its magnitude and shape can be aff ected considerably by pigment composition and concentration. We conducted Gaussian decomposition to the absorption spectra of phytoplankton pigment and studied the spectral components of the phytoplankton, in which the package effect was investigated using pigment concentration data and phytoplankton absorption spectra. The decomposition results were compared with the corresponding concentrations of the five main pigment groups (chlorophylls a , b , and c , photo-synthetic carotenoids (PSC), and photo-protective carotenoids (PPC)). The results indicate that the majority of residual errors in the Gaussian decomposition are <0.001 m^-1 , and R 2 of the power regression between characteristic bands and HPLC pigment concentrations (except for chlorophyll b) was 0.65 or greater for surface water samples at autumn cruise. In addition, we determined a strong predictive capability for chlorophylls a , c , PPC, and PSC. We also tested the estimation of pigment concentrations from the empirical specific absorption coeffi cient of pigment composition. The empirical decomposition showed that the Ficek model was the closest to the original spectra with the smallest residual errors.The pigment decomposition results and HPLC measurements of pigment concentration are in a high consistency as the scatter plots are distributed largely near the 1:1 line in spite of prominent seasonal variations. The Wozniak model showed a better fit than the Ficek model for Ch1 a , and the median relative error was small. The pigment component information estimated from the phytoplankton absorption spectra can help better remote sensing of hyperspectral ocean color that related to the changes in phytoplankton communities and varieties.     

Partitioning particulate absorption coefficient into contributions of phytoplankton and nonalgal particles: A case study in the northern South China Sea

We measured the absorption coefficients of suspended particles (a_p(λ)) during three cruises from coastal waters to open ocean in the northern South China Sea (NSCS). The absorption contributions of phytoplankton (a_ph(λ)) and nonalgal particles (a_NAP(λ)) were determined using the methanol extraction method. Based on the dataset of about 360 samples, we examined the spectral relationships of the particle absorption coefficients. The results show that a_p(λ) spectra are well linearly correlated with a_p(443) over the wavebands between 420–650 nm; a_ph(λ) could be well expressed as the second-order quadratic equations of a_ph(443) among the blue-green wavebands, and a_NAP(λ) follows the general exponential function. Based on these spectral relationships, a model was proposed for partitioning the total particulate absorption coefficients into the contributions of phytoplankton and nonalgal particles using the nonlinear optimization method. The model was validated by comparing the computed results with in situ absorption coefficients. In some wavebands, such as 412 nm, 443 nm, 490 nm and 683 nm, we obtained good correlations with the percentage root mean square error (RMSE) values being controlled within 25% and the slopes being closer to 1.0. For samples from coastal waters, the discrepancy was a little large, which might be due to the higher absorption contributions from certain pheopigments. Overall, this model provides us much insight into phytoplankton absorption retrieval from in situ measurements and remote sensing ocean color data.     

Spectral absorption coefficient of photosynthetically active pigments in the equatorial Pacific Ocean (165°11–150°W)

Spectral absorption coefficients of total particulate material and detritus were measured throughout the euphotic zone along the equator between 165°E and 150°W and during time-series for each of these two longitudes in October 1994 (JGOFS-FLUPAC cruise). The sum of pigments obtained by spectrofluorometry (tChla=DV−chla+Chla) was used for normalization (and was also compared to fluorometric and HPLC measurements as an intercalibration study). In order to assess the specific absorption coefficient of photosynthetically active pigments (aps) from the pigment-specific absorption coefficient for phytoplankton (a_ph^*), we made a multiple regression analysis of measured phytoplankton absorption spectra onto publishedin vivo spectra of pure pigments. This made it possible to calculate the concentrations of photoprotective carotenoids (tPPC) when HPLC measurements were not available and thus to subtract their contribution to absorption from the total phytoplanktonic absorption coefficient (a_ph). Methodological uncertainties in both coefficients used for calculating absorption coefficients and in pigment measurements are discussed. Pigments and absorption measurements made during the cruise enabled us to describe two typical trophic regimes in the equatorial Pacific ocean: oligotrophic waters of the ”warm pool“ west of 170°W and high-nutrient, low-chlorophyll waters (HNLC) of the upwelling east of 170°W. The vertical decreasing gradient of a_ph^* from the surface to the deep chlorophyll maximum (DCM) was due to a high tPPC/tChla ratio at the surface and was higher in the oligotrophic (0.14-0.065 m² mg (tChla)⁻¹ biomass dominated byProchlorococcus, rich in zeaxanthin) than in the mesotrophic area (0.07-0.06 m2 mg (tChl a)-' biomass dominated by picoeucaryotes). Below the DCM,a_ph^* reached a similar minimum value in both oligotrophic and mesotrophic areas.a^*_ps varied less than a^*_ph from the surface layer to the DCM in both oligotrophic and mesotrophic areas. The difference in a^*_ph and a^*_ps from west to east of the transect could be interpreted as a shift in the phytoplankton composition, with a dominance of procaryotes in the west and a dominance of eucaryotes in the upwelling area. Higher aps in well-lit typical oligotrophic waters indicated that phytoplankton communities dominated byProclorococcus might be more efficient for capturing light usable for photosynthesis than those present in the HNLC situation.     

基于南海北部海区浮游植物吸收光谱斜率变化的粒级结构反演

浮游植物的粒级结构是一个重要的生物参数。基于南海北部海区不同水体环境下测量的生物光学数据, 作者深入研究了粒级结构对浮游植物吸收光谱的影响。结果表明, 选择443和510nm波段计算得到的浮游植物光谱斜率S对粒级结构的变化具有较高的敏感性, 其随着小型浮游植物比例的增大呈不断增加的趋势。S与水体叶绿素a浓度、浮游植物吸收系数(aph(443))之间表现出明显的正相关特征。以40%为界对不同粒级浮游植物的优势进行定义, 发现在S与叶绿素a浓度、aph(443)的关系分布中小型(Micro)和微微型(Pico)浮游植物占据优势的水体表现出较为明显的分界, 叶绿素a浓度和aph(443)分别在0.70mg•m-3和0.05m-1附近, 相应的S在0.0004(m•nm)-1左右。基于实测数据建立的遥感反射率蓝绿波段比值与S之间的统计关系, 决定系数高达0.91, 为从水色遥感数据反演浮游植物粒级结构提供了重要手段。     

秦皇岛外海低氧区颗粒物吸收光谱特征

近年来, 渤海夏季低氧现象频发, 引起了人们的广泛关注。然而对该海域低氧形成的机制还未得到充分认识。研究基于在秦皇岛外海的现场观测, 分析了海水中颗粒物吸收光谱特征及其与不同粒径浮游植物叶绿素a (chl a)组成、环境因子的关系, 评估了夏季底层水体脱氧过程中有机物来源与特征。结果显示,夏季秦皇岛外海微型浮游植物chl a占总量的80%。表层水体中, 总颗粒物吸收光谱[a_p(l)]特征由浮游植物色素吸收光谱[a_ph(l)]主导, 在中、底层水体中则由碎屑颗粒物吸收光谱[a_d(l)]主导。垂向上, a_p(440)和a_d(440)均表现为表层<中层<底层。结果还表明, 浮游植物粒径主导秦皇岛外海chl a的光吸收效率, 即a^*_ph(440)。基于三粒级chl a含量, 可利用多元回归预测a_ph(440)。碎屑颗粒物的吸收光谱同样受浮游植物群落、有机质相对含量等的影响。研究结果表明初级生产产生的微型颗粒有机物是底层水体脱氧的主要底物。     

Chlorophyll-specific absorption coefficients and pigments of phytoplankton off Sanriku, northwestern North Pacific

The variety in shape and magnitude of thein vivo chlorophyll-specific absorption spectra of phytoplankton was investigated in relation to differences in pigment composition off Sanriku, northwestern North Pacific. Site-to-site variations of the absorption coefficients,a _ph ^* (λ), and pigment composition were clearly observed. At warm-streamer stations, higher values ofa _ph ^* (440) anda _ph ^* (650) were found with relatively high concentrations of chlorophyllb (a green algae marker). At stations located in the Oyashio water (cold streamer),a _ph ^* (440) values were lower and fucoxanthin (a diatom marker) concentrations were higher, compared to the other stations. The peak in the absorption spectra at the Oyashio stations was shifted toward shorter wavelengths, which was probably due to the presence of phaeopigments. In a Kuroshio warm-core ring, the magnitude ofa _ph ^* (440) was in between those at the warm-streamer and Oyashio stations, and the diagnostic pigment was peridinin (a dinoflagellate marker). These findings indicated that major differences in phytoplankton absorption spectra of each water mass were a result of differences in the phytoplankton pigment composition of each water mass, which was probably related to the phytoplankton community.     

Selective transmission of light in the ocean waters and its relation to phytoplankton photosynthesis

Occurrence of the depth differences in pigment composition and photosynthetic properties of marine phytoplankton were examined in relation to the spectral changes of light with depth. Phytoplankton were taken from various depths in the northwestern North Pacific, and their absorption spectra were determined with intact cells and in 90% acetone extract. The photosynthetic activities of phytoplankton were concurrently measured under blue, green, red and white light. The difference in absorption spectra for the surface and deeper samples was considerably small, indicating that the prevailing green or blue light in the deeper layers may have little significance for depth-variations of the pigment composition in marine phytoplankton. The depth differentiation in the shape of the light-photosynthesis curve was marked in a well stratified water column but no active response of deeper phytoplankton to green light could be confirmed. The photosynthetic efficiencies of phytoplankton for blue and green light were approximately 105–115 % and 80–90 % of white light, respectively, irrespective of sampling depth.Contribution No. 261 from Shimoda Marine Biological Station