海州湾赤潮高发区浮游细菌与赤潮及环境因子的关系

海州湾是南黄海赤潮高发区之一。为研究浮游细菌与赤潮及环境因子的关系,于2020年11月在海州湾赤潮期间进行了现场调查,采集了8个站位的浮游细菌、浮游植物样品,获取了温度、盐度、叶绿素a以及氮、磷、硅营养盐浓度等环境因子信息,分析了赤潮原因种及浮游细菌群落结构情况。结果显示,此次赤潮原因种为三叶原甲藻(Prorocentrum triestinum)、赤潮异弯藻(Heterosigma akashiwo)及塔胞藻(Pyramimonas sp.),发生赤潮时水温、盐度较低,盐度与赤潮异弯藻的分布有一定的联系。使用16SrRNA高通量测序方法分析调查海域的浮游细菌情况,结果显示赤潮发生站位的浮游细菌多样性略低于其他非赤潮发生站位,优势细菌与其他站位有明显不同,以假单胞菌目(Pseudomonadales)、红杆菌目(Rhodobacterales)和黄杆菌目(Flavobacteriales)为主。赤潮发生站位的浮游细菌群落结构也存在一定的差异,不同站位可能处于不同的赤潮阶段,对浮游细菌群落具有不同的影响。相关性分析显示,黄杆菌目与叶绿素a显著正相关,表明黄杆菌目与赤潮发生有一定的关系。     

Influence of the Po River runoff on the bacterioplankton community along trophic and salinity gradients in the Northern Adriatic Sea

The Po River runoff strongly affects the oceanographic and ecological characteristics of the Northern Adriatic Sea. Catalysed reported deposition ‐ fluorescence in situ hybridization (CARD‐FISH) analysis was employed to assess how the composition of the coastal bacterioplankton community is influenced by the river runoff in two different seasons (spring and autumn). Samples were collected from the water column along a coastal–offshore transect in the Northern Adriatic Sea at different depths. Four clone libraries were then constructed from coastal (0 m) and offshore waters (?65 m). Higher abundances of bacteria were recorded in coastal waters as compared with the offshore samples. This result was mainly due to the trophic state of the water column, and it was related to salinity. Particularly, Actinobacteria and Gammaproteobacteria were affected by the riverine inputs, whereas Bacteroidetes and Alphaproteobacteria showed only minor responses. This was particularly clear in the autumn sample, in which a clear difference between the coastal and the offshore samples was found due to a strong influence of the less saline river water with high nutrient concentrations. Analysis of 205 partial length 16S rRNA gene sequences indicated a high diversity with the dominance of Alphaproteobacteria, Bacteroidetes and Gammaproteobacteria mainly affiliated to coastal and marine bacterioplankton clades. Actinobacteria were also detected and, together with Gammaproteobacteria, strongly follow the freshwater intrusion. Overall, our results indicate that the seasonal difference in the Po River discharge greatly affects the bacterioplankton community. In spring we observed a smooth transition from coastal to open‐sea conditions owing to the more superficial freshwater plume. In autumn the deeper freshwater intrusion in the coastal site and thermal stratification offshore resulted in a marked difference between the coastal and offshore microbial communities.     

The nematodes of the Thames estuary: Assemblage structure and biodiversity, with a test of Attrill's linear model

Although many studies of Nematoda have been undertaken in estuarine systems, there are relatively few studies which have analysed the distribution of fauna across the entire salinity range from marine to freshwater conditions. The Thames estuary has a long history of anthropogenic impact and recovery, since it was described as “azoic” in the 1950s, which has been monitored primarily through studies of water quality and fish stocks, with less emphasis on macroinfauna and very little information on meiofaunal organisms. This study aimed to describe the nematode fauna at eight stations along the estuary from marine to freshwater conditions in order to assess patterns of density, diversity and species assemblage structure. Nematode density and diversity were generally lower in the middle reaches of the estuary, associated with the region of greatest salinity range, a pattern which was found to be in agreement with Attrill's [2002. A testable linear model for diversity trends in estuaries. Journal of Animal Ecology 71, 262–269] linear model. Multivariate analysis confirmed that each station supported a distinct nematode fauna, which could be used to identify five zones along the estuary related to salinity regime. Although alpha diversity at each station was relatively low, species turnover along the estuary resulted in relatively high gamma diversity (153 spp.) similar to that found in a number of European estuaries. The results of this study did not suggest that the nematode fauna was under significant stress from the lower levels of pollution currently found in the system. The potential routes for the recovery and re-colonization of the estuary since it most polluted days are discussed.     

Evolution of bacterial communities in the Gironde Estuary (France) according to a salinity gradient

Three surveys were performed in the Gironde Estuary (France) in August 1981, March 1982 and July 1982. For each campaign, seventy samples were taken by helicopter, in order to follow the tide along the estuary. Of the parameters that were studied, salinity appeared to be the most important and which controls the bacterial communities along the estuary. This paper deals with the evolution of bacterial communities along a salinity gradient. The information obtained from various bacteriological parameters (total bacterial counts, viable counts on salted and unsalted media, functional evenness) were convergent. The bacterial community is dominated by an halotolerant microflora. In the estuary, a continental microflora is followed by a marine microflora. The succession zone between these two microflora is located between 5 and 10‰ areas of salinity.     

Bacterioplankton and bacteriobenthos of the Amur estuary and the adjacent areas in the Summer of 2006

This work presents the results of the study of the plankton and benthic microbiocenoses of the Amur estuary. It is shown that the distribution of the total abundance and indicator groups of the bacteriobenthos are characterized by stronger heterogeneity compared with the bacterioplankton and that it depends on the Amur river drainage and the bottom type. The river drainage helps by increasing the overall bacterioplankton abundance in the near-mouth part of the estuary. Microorganisms utilizing low concentrations of OM play a major role in the processes of the OM utilization in the water and bottom sediments. Saprophytic bacteria play a significant role in the OM utilization only in the water at certain sampling sites in the Tatarskiy Strait and Sakhalin Bay and in the bottom sediments taken in the mouth part of the estuary. Some parts of the estuary subject to organic contamination are found according to the microbiological characteristics. It is shown that the fluctuation of the salinity leads to a change of the share of bacteria with different food demands in the microbial community.     

Limno-tolerant bacteria govern nitrate concentration in Mandovi Estuary,India

The spatial and temporal abundances of limno-tolerant and halo-tolerant bacteria were investigated in the tide-dominated Mandovi estuary along the west coast of India. These investigations were carried out in relation to various environmental parameters on a monthly basis at three fixed stations for a year. On an annual basis, the estuary showed an average salinity of 28.2, 17.4, and 12.6 at the mouth, midstream and upstream region. Halo-tolerant retrievable count (HTRC) and limno-tolerant retrievable count (LTRC) of bacteria were in the order of 10⁶ L⁻¹. Among the environmental parameters, a strong negative relationship between salinity and nitrate (r = −0.806; p < 0.001) suggested that 64% of the variation could be due to fresh water influence in the estuary. The limno-tolerant retrievable count (LTRC) brought about 23% variations in nitrate concentration. This influence was maximum during the monsoon (r = 0.522; p < 0.05) especially in the surface waters (r = 0.624; p < 0.001) suggesting nitrate reduction by LTRC. Measurements of nitrate reducing activity (NRA) in whole-water samples along the salinity gradient in the estuary also revealed higher reduction rates at lower salinity upstream. This was further confirmed by culture experiments where the limno-tolerant bacteria showed higher NRA than halo-tolerant forms. It is therefore suggested that LTRC is more actively involved in the variation of nitrate that enters the Mandovi estuary particularly during the monsoon.     

Diversity and distribution of bacterioplankton in the coastal upwelling waters off Hainan Island,China

The diversity, community composition and 16 S rRNA gene abundance of bacterioplankton along a transect across an upwelling area off the eastern coast of Hainan Island（the Qiongdong upwelling） were investigated in August of 2016 using high throughput sequencing and quantitative PCR assay of 16 S rRNA genes. Compared with the offshore stations, the inner-shelf stations had higher bacterial gene abundance（up to 3 fold） and operational taxonomic unit richness, a result of the influence of upwelled a...     

Copepod grazing during spring blooms: Can Pseudocalanus newmani induce trophic cascades?

During late winter and spring of 2002 and 2003, 24 two- to three-day cruises were conducted to Dabob Bay, Washington State, USA, to examine the grazing, egg production, and hatching success rates of adult female Calanus pacificus and Pseudocalanus newmani. Here, we discuss the results of our grazing experiments for P. newmani. Each week, we conducted traditional microzooplankton dilution experiments and “copepod dilution” experiments, each from two different layers. Grazing was measured by changes in chlorophyll concentration and direct cell counts. Clearance rates on individual prey species, as calculated by cell counts, showed that Pseudocalanus are highly selective in their feeding, and may have much higher grazing rates on individual taxa than calculated from bulk chlorophyll disappearance. The grazing rates of the copepods, however, are typically an order of magnitude lower than the grazing rates of the microzooplankton community, or the growth rates of the phytoplankton. P. newmani ingested diatoms, but, at certain times fed preferentially on microzooplankton, such as ciliates, tintinnids, and larger dinoflagellates. Removal of the microzooplankton may have released the other phytoplankton species from grazing pressure, allowing those species’ abundance to increase, which was measured as an apparent “negative” grazing on those phytoplankton species. The net result of grazing on some phytoplankton species, while simultaneously releasing others from grazing pressure resulted in bulk chlorophyll-derived estimates of grazing which were essentially zero or slightly negative; thus bulk chlorophyll disappearance is a poor indicator of copepod grazing. Whether copepods can significantly release phytoplankton from the grazing pressure by microzooplankton in situ, thus causing a trophic cascade, remains to be verified, but is suggested by our study.     

The Gambia River estuary: A reference point for estuarine fish assemblages studies in West Africa

The Gambia River is one of the last aquatic ecosystems in West Africa that has not yet been affected by strong environmental changes and human disturbances. In contrast to the neighbouring Casamance and Sine Saloum estuaries, the Gambia estuary is free of major climatic perturbation and remains a “normal” estuary, with a salinity range from freshwater to 39. The present paper aims to study the spatial and seasonal variability of fish assemblages in this estuary in terms of bio-ecological categories and of their relation with some environmental variables. Four surveys were conducted, from June 2001 to April 2002, in order to cover the major hydroclimatic events, at 44 sampling sites along the lower, intermediate and upper zones of the Gambia estuary (up to 220 km). Fish assemblages were sampled using a purse seine net, fish were identified to species level and environmental variables such as water depth, transparency, salinity, temperature and percentage oxygen saturation were measured. The main spatial structure of the fish assemblages and its seasonal changes were first studied using the STATIS-CoA multitable method. The combination of fish assemblages and environmental variables was then analysed using the STATICO method, designed for the simultaneous analysis of paired ecological tables. A total of 67 species were observed, belonging to all bio-ecological categories characterizing West African estuaries. The marine component of the community was largely dominant throughout the estuary, while the freshwater component was permanently observed only in the upstream zone. The main spatial structure was a longitudinal gradient contrasting marine and freshwater affinity assemblages, with strong seasonal variations. The most complete gradient was observed in December, at the beginning of the dry and cool season, while in June, at the end of the dry and warm season, there was the least structured gradient. The role of salinity, always correlated with temperature, was emphasized, while turbidity appeared to be another important factor. Oxygen and depth did not play a major role at the estuary scale. The relative importance of the bio-ecological categories varied according to the season and the distance to sea. Stable fish assemblages were observed in the lower zone at the end of the dry season, in the upper zone during the flood and in the middle zone throughout the year. In some situations, a relative inadequacy between fish assemblages and their environment was noticed. The present study contributes to the definition of the functioning of a “normal” West African estuary, the Gambia estuary, with balanced effects of marine and freshwater influences and the presence of all bio-ecological categories. The Gambia estuary can therefore be considered to be a reference ecosystem for further comparisons with other tropical estuarine ecosystems, subjected to natural or artificial perturbations.     

Primary production and implications for metabolic balance in Hawaiian lee eddies

Recent discrepancies between geochemical and biological approaches for determining whether ocean ecosystems are net heterotrophic or net autotrophic have led to uncertainty in the net metabolic state of open ocean ecosystems. Geochemical approaches indicate that the oceans are net positive autotrophic, but direct observations based on short-term incubation techniques suggest that the ocean is in a state of net heterotrophy. One hypothesis for the apparent discrepancy is that net autotrophic production occurs in aperiodic “bursts,” which are superimposed on a more constant background state of net heterotrophy. Mixing events, which introduce new nutrients to the surface ocean, provide one mechanism for fueling such aperiodic bursts of net production. In conjunction with the Eddy Flux (E-Flux) program in the lee of the Hawaiian Islands during winter 2004–2005, we examined the relationship between photosynthesis and irradiance (P vs. E) in surface waters inside and outside of two cold-core, cyclonic eddies, and conducted five incubation experiments to examine the metabolic response of mixed-layer plankton communities to nutrient-rich deep-sea water additions. Our results showed that in the mixed layer, maximum rates of light-saturated photosynthesis, derived from photosynthesis–irradiance experiments were not significantly different inside vs. outside the eddies (p=0.35 and 0.44 for E-Flux I and E-Flux III, respectively). Addition of nutrients to mixed-layer water showed that (1) gross primary production (GPP) became decoupled from a more constant rate of respiration and (2) net system metabolism shifted from approximate balance, or slight net heterotrophy, to a demonstrably net autotrophic system. From these results, we determined that the threshold GPP for net autotrophic production for the mixed layer of the study region was 1.65 mmol O₂ m⁻³ d⁻¹, which is consistent with previous estimates for the oligotrophic open ocean.     

Distribution of whitemouth croaker (Micropogonias furnieri, Desmarest 1823) larvae in the Río de la Plata estuarine front

Whitemouth croaker (Micropogonias furnieri) larvae obtained and hydrographic data collected in the Rio de la Plata estuary (35°S–56°W) between 1987 and 2000 were used to explore the early life stages spatial and temporal distribution patterns and their relation to oceanographic features. The spatial distribution, restricted to a band in the inner part of the estuary, coincided with the bottom salinity front and the maximum turbidity zone (MTZ, turbidity front). Larvae were present during the warmest months (October through May) within a range of 14–24.5 °C temperature and 0.9–33 salinity. A vertically stratified sampling performed in the region where the largest abundance was found (December 2005 and March 2006) was used to test the hypothesis that larvae retention occurs in the bottom salinity front.The vertically stratified sampling showed larvae throughout the water column with high predominance in the river–estuary transition zone. A positive correlation between abundance and the bottom salinity horizontal gradient was found. The size analysis showed that the largest individuals (>10 mm SL), probably undergoing the settlement process, inhabited near the bottom and that the smallest (<10 mm SL) were present in the whole water column. Length distribution along the front showed no trend.Results support the estuarine retention hypothesis of previous studies on whitemouth croaker gravid females, eggs distribution and outcomes from a numerical simulation model. Retention in the salinity front/MTZ would allow larvae to benefit from food accumulation in the region, the high turbidity level provide shelter against predators and retention in the estuary secure closeness to the main nursery ground.     

山东半岛近岸海域蟹类群落结构特征的研究

根据2014年8月和10月、2015年2月和5月使用单船底拖网进行的4个航次调查数据,对山东半岛近岸海区的莱州湾及渤海南部、山东半岛北部和山东半岛南部等3个海域蟹类种类组成、时空分布、优势种、群落结构稳定性等群落结构特征进行了研究。结果显示,4次调查共捕获蟹类20种,隶属于10科17属,其中日本蟳（Charybdis japonica）和三疣梭子蟹（Portunus trituberculatus）是主要经济种类,其余均为小型饵料型蟹类;海区内主要的优势种为双斑蟳（Charybdis bimaculata）、日本蟳（Charybdis japonica）和三疣梭子蟹（Portunus trituberculatus）,3个海域优势种季节更替均十分明显;莱州湾及渤海南部和山东半岛南部2个海域生物量季节变化明显,春季较低,在夏季达到峰值,夏季到冬季呈降低趋势,山东半岛北部海域生物量季节变化不明显。3个海域蟹类群落物种多样性指数（H'）、丰富度指数（D）及均匀度指数（J'）均处于较低水平,并有一定的季节变化;水深、水温和盐度是影响蟹类群落结构的重要因子,渤莱沿岸流、黄海暖流和黄海冷水团通过影响海域内水温与盐度影响蟹类群落结构。研究表明山东半岛近岸海区蟹类以小型饵料型蟹类为主,蟹类多样性水平较低,优势种更替明显,群落季节更替指数较高,季节间迁移频繁,蟹类群落不稳定。     

渤海海域浮游病毒和浮游细菌的丰度变化与环境因子之间的耦联关系

Uncovering the role of environmental factors and finding critical factors which harbor significant fractions in governing microbial communities remain key questions in coastal marine systems. To detect the interactions between environmental factors and distributions of virio-and bacterioplankton in trophic coastal areas, we used flow cytometry to investigate the abundance of virio-and bacterioplankton covering 31 stations in the Bohai Sea of China. Our results suggested that the average abundance of total virus(TV) in winter(～2.29×10~8 particles/mL)was slightly lower than in summer(～3.83×10~8 particles/mL). The mean total bacterial abundance(TB) was much lower in winter(～2.54×107 particles/mL) than in summer(～5.43×10~7 particles/mL). Correlation analysis via redundancy analysis(RDA) and network analysis among virioplankton, bacterioplankton and environmental factors revealed that the abundances of viral and bacterial subpopulations depend on environmental factors. In winter, only temperature significantly influenced the abundances of virio-and bacterioplankton. In summer, in addition to temperature, both salinity and nutrient(SiO_2) had a remarkable impact on the distribution of virioand bacterioplankton. Our results showed a clear seasonal and trophic pattern throughout the whole water system, which revealed that temperature and eutrophication may play crucial roles in microbial distribution pattern.     

Short-term under-ice variability of prokaryotic plankton communities in coastal Antarctic waters (Cape Hallett, Ross Sea)

During the 2006 Italian Antarctic expedition a diel sampling was performed close to Cape Hallett (Ross Sea) during the Austral summer. Under-ice seawater samples (4 m) were collected every 2 h for 28 h in order to estimate prokaryotic processes' variability and community structure dynamics. Prokaryotic and viral abundances, exoenzymatic activities (β-glucosidase, chitinase, lipase, alkaline phosphatase and leucine aminopeptidase), prokaryotic carbon production (³H-leucine incorporation) and community structure (Denaturing Gradient Gel Electrophoresis – DGGE fingerprints) were analysed. Results showed that the diel variability of the prokaryotic activity followed a variation in salinity, probably as a consequence of the periodical thawing of sea ice (driven by solar radiation and air temperature cycles), while negligible variation in viral and prokaryotic abundances occurred. The Bacterial and Archaeal community structures underwent an Operational Taxonomic Units (OTUs) temporal shift from the beginning to the end of the sampling, while Flavobacteria-specific primers highlighted high variations in this group possibly related to sea ice melting and substrate release.     

River fisheries management in Bangladesh: Drawing lessons from Community Based Fisheries Management (CBFM) experiences

River fisheries in Bangladesh is characterized as “open-access” and the history of administrative and legislative measures bear “contradiction and dilemmas” in resource extraction. The 1950 Fisheries act, the proclamation of 1973 that restricted lease to the registered fisher cooperatives and the experimental New Fisheries Management Policy (NFMP) of 1986 could not contribute to devolve into any participatory institution to introduce sustainable fisheries management. Because of the persistent dilemma in government policy, continued increase in fishing pressure and other anthropogenic reasons, the River resources degraded substantially. Over the past ten years, the Department of Fisheries (DOF) in collaboration with NGOs implemented community based fisheries management (CBFM) approaches with the technical assistance from the WorldFish Center. The principal goal of the approaches was to provide access rights to the fishers through organizing poor fishers and the community to introduce sustainable fisheries management in beels, floodplains and River sections. The CBFM experiences suggest that management and institution building process in river management is complex, and require participation of all concerned stakeholders including local government institutions and administration. CBFM-2 river fisheries management developed a broad-based institutional framework that include community and local government along with the direct beneficiaries and resource users. A positive feature of such institutions is its ability to facilitate flow of information among agents, which is a key to maintain solidarity within and across groups. This paper draws lessons from the CBFM experiences in Bangladesh to manage river fisheries resources in Bangladesh.     

Final dissolved organic carbon broad community intercalibration and preliminary use of DOC reference materials

A broad community intercalibration exercise for accurate measurement of dissolved organic carbon (DOC) in seawater has been carried out over a period of 5 years. A set of 10 natural samples with DOC content from 40 to 200 μM C were accompanied by two glucose standards and a “zero C” blank; all sealed in glass ampoules. Samples were sent to all interested analysts for “blind” analysis; 62 laboratories in 17 countries participated. A total of 59 separate analyses were determined to be acceptable by screening criteria based on standards and blank; another nine sets of analyses did not pass the screening. The majority of the analyses, both those passing and those that did not, were performed with high temperature combustion (HTC) methods, six sets of analyses were done using wet chemical oxidation methods.From the 53 sets of acceptable HTC analyses, the coefficient of variation (%CV) for analytical comparability of the samples was 10% (“community precision”). It is estimated that the individual replicate injection precision for most instruments was approximately 2% and that no additional variability was caused by differences within the ampoules of individual samples. The additional variability over 2% was likely a result of both random and systematic differences in analytical capabilities from instrument to instrument and from day to day for individual instruments. With an arbitrary selection after the fact, smaller subsets of analysts can show comparability better than 10% and duplicate or triplicate runs on different days of the full sets of samples in several laboratories showed comparability in the 2–6.5% range. Experienced oceanic analysts, with internal or shared reference materials, can now show reproducibility and comparability at a level closer to 2%.Preliminary use of DOC reference materials by 14 participants showed day-to-day reproducibilities for their laboratories in the 2–6% range in most cases; several with poorer reproducibility do not normally perform DOC analyses on samples with concentrations as low as the deep ocean reference used here. Use of these reference materials can also give a demonstration of comparability between laboratories. For credibility of DOC analyses, it is necessary for analysts to use community reference materials and report results of their analytical performance with these references.This paper does not identify individual data nor should it be considered an evaluation of individual laboratories or analysts. The purpose is to show the summary picture of the international community of DOC analysts as it existed in the mid- to late 1990s.     

夏季长江口浮游细菌和浮游病毒的分布特征及环境制约因素

应用荧光显微直接计数法,研究了2006年夏季长江口及邻近海域浮游细菌、浮游病毒数量的分布特征,探讨了它们与环境因子之间的关系.结果表明:(1)浮游细菌数量为(6.92×105～5.54×106)个/mL,浮游病毒数量为(2.22×106～9.97×107)个/mL.浮游细菌和浮游病毒数量的平面分布特征较一致,均为近海过...     

渤海湾表层海水中浮游细菌群落随离岸距离的分布特征及其影响因素

为研究渤海湾近岸污染对远近岸海域微生态的影响,利用高通量测序技术,对渤海湾不同离岸距离的6个站位采集表层海水,进行浮游细菌群落结构分析,结合环境、空间因素探究影响其变化的主要因素。结果表明:研究区域存在环境因子的梯度变化,如氮营养盐在近岸高于远岸;细菌α-多样性在不同站位间差异不显著,但仍显示在近岸相对较高;细菌群落结构随离岸距离变化显著,γ-变形菌和拟杆菌在近岸显著富集,且与氮营养盐的含量有关;蓝细菌在远岸显著富集,且与氨氮、透明度、电导率有关;邻体矩阵主坐标单独解释部分对群落结构变异的贡献率最大(38.1%),说明可能存在尚未测量但具有空间结构的环境变量影响群落空间分布;结合功能预测的结果推测近岸区域的富营养与烃类污染等可能影响群落变化。本文从环境和空间影响两方面探讨了渤海湾不同离岸距离的海域浮游细菌群落结构变化,为研究渤海湾海洋生态及环境保护提供一定的参考。     

An experimental method for determining the frequency-dependent added mass and added mass moment of inertia for a floating body in heave and pitch motions

Most of the existing relevant materials have been obtained from experiments, in which evaluating the added mass at the resonant frequency corresponding to the peak of a frequency-response curve obtained from the “forced” vibration analysis is the most popular technique. In this paper, a simple experimental method was presented where the “free” vibration responses instead of the “forced” ones were used to determine the values of m_ah and I_ap. The main part of the experimental system is composed of a floating body (model) and a spring–shaft shaker. The “free” vibration of this main part was induced by imposing on it an initial displacement (and/or an initial velocity), and from the time histories of displacements information such as the “damped” natural frequencies, damping ratios, sectional added mass coefficients (C_V and C_P) were obtained. Since the displacements of the spring–shaft shaker are “translational” and those of the floating body due to pitch motions are “angular”, a technique for the transformation between the associated parameters of the two components of the main part was presented.