Characterization of the southeastern US black sea bass (Centropristis striata) pot commercial fishery and implications for western North Atlantic right whale (Eubalaena glacialis) management and policy

A vital component of marine policy is the conservation and management of diverse marine resources. In the southeastern US, commercial fishermen target black sea bass (Centropristis striata) with pots from North Carolina to Cape Canaveral, Florida. During the fall through spring fishing season, western North Atlantic right whale (Eubalaena glacialis) distribution overlaps the black sea bass commercial pot fishery. Fishermen interviews revealed that the number of pots set ranged from 3 to 240 and the number of pots set per trawl ranged from 1 to 18. Generally, the amount of gear increased from south to north.     

Establishment and closure of the directed Florida whiting (Menticirrhus americanus) fishery and implications for North Atlantic right whale (Eubalaena glacialis) conservation and management

Today, ocean and coastal marine resource management is extremely complex. Marine resource managers are charged with conserving and managing many diverse species. Southern kingfish (Menticirrhus americanus), commonly known as whiting, are found from southern New England to Florida. During the fall through winter, western North Atlantic right whales (Eubalaena glacialis) are primarily found in the coastal nearshore waters off South Carolina, Georgia, and Florida, overlapping the whiting's range and habitat.     

Resource partitioning by two large planktivorous fishes Micromesistius australis and Macruronus magellanicus in the Southwest Atlantic

The ontogenetic, seasonal, bathymetric and regional variations in the feeding spectrum of 922 specimens of southern blue whiting Micromesistius australis and 512 specimens of hoki Macruronus magellanicus were studied on the Falkland Islands’ shelf (Southwest Atlantic) between November 1999 and April 2003. A total of 49 different prey items were found in the stomach contents of the two species, with the hyperiid Themisto gaudichaudii and Euphausiacea being amongst the most important prey. Although the species composition did not change over fish size, the proportions of individual prey items in their diets did, with an increase in T. gaudichaudii and Euphausiacea with increasing fish size in southern blue whiting. The opposite occurred in hoki. Seasonal variations in the diet were found to mirror the seasonal abundance of prey around the Falkland Islands for the two species. Intra-specific differences in the diet of both predators reflected the distribution of prey, which in turn was determined by the water structure in the two regions sampled, leading to very different diets. In the limited time that the two species occupied the same space there was little or no competition resulting in almost total segregation of their trophic niches in space and time.     

Trans-Atlantic responses of Calanus finmarchicus populations to basin-scale forcing associated with the North Atlantic Oscillation

Populations of the copepod species Calanus finmarchicus often dominate the springtime biomass and secondary production of shelf ecosystems throughout the North Atlantic Ocean. Recently, it has been hypothesised that interannual to interdecadal fluctuations observed in such populations are driven primarily by climate-associated changes in ocean circulation. Here, we compare evidence from the North Sea and Gulf of Maine/Western Scotian Shelf (GoM/WSS) linking fluctuations in C. finmarchicus abundance to changes in ocean circulation associated with the North Atlantic Oscillation (NAO). A particularly striking contrast emerges from this Trans-Atlantic comparison: whereas the North Sea C. finmarchicus population exhibits a negative correlation with the NAO index, the GoM/WSS population exhibits a more complex, positive association with the index. The physical processes underlying these contrasting population responses are discussed in the context of regional- to basin-scale circulation changes associated with the NAO.     

Evaluating the effects of protection on Paracentrotus lividus distribution in two contrasting habitats

The sea urchin Paracentrotus lividus is common in the Mediterranean in shallow subtidal rocky habitats and in Posidonia oceanica beds. The aim of this study is to investigate whether protection has the same effect on the population structure of P. lividus occurring in rocky reef habitats and in P. oceanica beds. These results are important to generate hypotheses about the influence of human harvesting, predatory pressure and migration processes on P. lividus in the two habitats.     

Distribution of Calanus finmarchicus in the northern North Atlantic and Arctic Ocean—Expatriation and potential colonization

The distribution of Calanus finmarchicus was studied on a transect across the central Greenland Sea, and on five transects from the Eurasian shelves across the Atlantic Inflow in the Arctic Ocean. Stage composition was used as an indicator for successful growth; gonad maturity and egg production were taken as indicators for reproductive activity. On the Arctic Ocean transects, these parameters were measured simultaneously from the sibling species Calanus glacialis. Response of egg production rate to different temperatures at optimal food conditions was very similar between both species in the laboratory. C. finmarchicus was present at all stations studied, but young developmental stages were only present close to the regions of submergence of Atlantic water under the Polar water. This together with a decreasing abundance and biomass from west to east along the Atlantic Inflow in the Arctic Ocean and reproductive failure indicates that C. finmarchicus is expatriated in the Arctic Ocean. We hypothesize that the late availability of food in the Arctic Ocean, rather than low temperature per se, limits reproductive success. Better reproductive success in the very low temperature regions of the Return Atlantic Current and the marginal ice zone in the Greenland Sea supports this hypothesis. The possibility for a replacement of C. glacialis by C. finmarchicus and consequences for the ecosystem after increasing warming of the Arctic are discussed.     

Feeding preferences of estuarine mysids Neomysis integer and Rhopalophthalmus tartessicus in a temperate estuary (Guadalquivir Estuary,SW Spain)

Mysid shrimps are an important component of estuarine food webs because they play a key role in energy transfer as intermediate prey. We investigated the seasonal, tidal and depth specific variation in the diet of the estuarine mysids Neomysis integer and Rhopalophthalmus tartessicus and explored its implications for the planktonic community structure of a temperate estuary (Guadalquivir Estuary, SW Spain). Neomysis integer is an opportunistic omnivore feeding mainly on mesozooplankton and on members of the detrital–microbial loop, shifting prey seasonally according to availability. In contrast, R. tartessicus showed a more carnivorous diet and shifted its target prey during seasons of low resource availability. Despite statistically significant differences in diet composition, both species shared prey of similar size, particularly juvenile Mesopodopsis slabberi, the most abundant mysid species in this estuary, and copepods. Although these similarities imply inter-specific resource competition, their co-existence is achieved by niche partitioning and spatial segregation: the higher osmoregulatory capacity and foraging plasticity of N. integer confers a broader niche breadth for this species allowing N. integer to inhabit the more stressful oligohaline region of the estuary where R. tartessicus cannot survive. We propose that this mechanism relaxes the potential for competition between N. integer and R. tartessicus.     

Fate of the Black Sea Acartia clausi and Acartia tonsa (Copepoda) penetrating into the Marmara Sea through the Bosphorus

In October 2005 spatial distribution of live and dead Acartia clausi and Acartia tonsa was studied in the Black and Marmara Seas and near the Marmara Sea inlet of the Bosphorus, in order to understand their fate upon transportation between two seas. The morphometric characteristics in both species from all studied areas, and the decreased abundance of A. clausi and A. tonsa from the Black Sea towards the Marmara Sea indicate that the Marmara Sea Acartia populations are formed by recruitment from the Black Sea. We observed mass mortality of A. clausi in the Marmara Sea near the Prince Islands. The majority of carcasses (66% of total A. clausi numbers in the Marmara Sea) were found in the salinity gradient layer.     

石斑鱼肠道原籍嗜冷杆菌( PsychrobacterSP.)SE6作为益生菌的体内外评价

研究了石斑鱼肠道原籍嗜冷杆菌SE6在体外的抑菌特性及对人工胃肠液的耐受特性,在此基础上研究了饲料中添加SE6(108CFU/g)对斜带石斑鱼生长性能和免疫功能的影响。体外试验结果表明:SE6对副溶血弧菌、哈维氏弧菌、梅氏弧菌和金黄色葡萄球菌等常见水产致病菌均有一定的抑制作用。pH为4.0的人工胃液能促进SE6的生长,处理2和4 h存活率分别为110.7%和173.0%;pH为3.0的人工胃液处理2 h后活菌数为1.59×105 CFU/cm3,存活率为1.36%,但SE6不能耐受pH为2.0的人工胃液。经浓度分别为0.1%,0.3%,0.5%和0.7%的胆盐处理3 h后,SE6的存活率分别为89.17%,88.33%,77.17%和12.33%。动物试验结果显示:投喂SE6 60 d后试验组饵料系数(0.95±0.01)显著低于对照组(1.03±0.02)。试验组血清补体C3在试验全期均高于对照组,补体C4含量在投喂SE6 60 d时显著上升。血清IgM含量在投喂30 d时显著上升。总之,嗜冷杆菌SE6能抑制多种常见病原菌的生长,而且对模拟胃肠道环境具有一定的耐受能力,添加到饲料中能显著提高石斑鱼饵料利用率,增强动物的免疫功能。     

Genetic and morphological description of Eucalanus spinifer T. Scott, 1894 (Calanoida: Eucalanidae), a circumglobal sister species of the copepod E. hyalinus s.s. (Claus, 1866)

A distinct genetic form of the eucalanid calanoid copepod Eucalanus hyalinus s.l. was identified in subtropical and temperate waters of the Pacific, Atlantic, and Indian Oceans. Results from mitochondrial (16S rRNA, COI) and nuclear (ITS2) genetic markers suggest that the two E. hyalinus forms are reproductively isolated. Eucalanus spinifer T. Scott is taken out of synonymy with E. hyalinus and is applied to the smaller of the two genetic forms, increasing the number of species in the genus Eucalanus to a total of six. Adult females of the sister species E. hyalinus s.s. and E. spinifer can be distinguished morphologically by the shape of the anterior portion of the head in lateral and ventral views, asymmetry in the length of antennule segments 22 and 23, length ratios of 22/5 and 23/5 of the longer of the antennules, the length of the caudal rami, and total body size, as measured by total length or prosome length. We illustrate and describe both adult females and males of E. spinifer, and discuss aspects of sexual dimorphism. The sister species are sympatric throughout much of their circumglobal biogeographic distributions, but appear to have centers of abundance in slightly different water mass types.     

漳州西施舌线粒体基因组全序列:腔蛤蜊属存在新种的证据

利用长PCR扩增漳州西施舌线粒体DNA(ZZ-mtDNA),用引物步移法测序,获得线粒体基因组DNA全序列,研究其基因组特点。结合双壳类49个物种线粒体全基因组,分析基因间核苷酸和蛋白质氨基酸序列的差异,构建系统进化树,探讨漳州西施舌系统演化地位。研究结果表明:漳州西施舌线粒体基因组DNA全长17 199 bp,A+T含量为64.2%,编码36个基因,其中12个蛋白质编码基因,22个转运RNA基因(tRNAs),2个核糖体RNA基因(lrRNA 和srRNA),全部基因均位于重链上,tRNASer为单拷贝,tRNAMet为双拷贝;非编码区占10.9%(1 882 bp/17 199 bp),其中,主非编码区为882 bp,与RZ-mtDNA主非编码区差异明显,另有一个较大(400 bp)的非编码区为漳州西施舌特异性非编码区;以双壳纲帘蛤目文蛤属3种贝类、贻贝目贻贝属4种贝类、珍珠贝目牡蛎科的6种贝类为参照,对编码基因的核苷酸序列和蛋白质氨基酸序列进行差异分析显示,漳州西施舌与日照西施舌达到了种间差异水平。线粒体基因组编码的基因、tRNA组成、非编码区均揭示漳州西施舌是腔蛤蜊属的一个新种。     

Phytopigments and fatty acids in the gut of the deposit-feeding heart urchin Echinocardium cordatum in the southern North Sea: Selective feeding and its contribution to the benthic carbon budget

As part of a broader study on benthic-pelagic coupling in the southern North Sea, specimens of the common heart urchin Echinocardium cordatum were sampled for analyses on phytopigments and fatty acids in their guts. Results were interpreted in the context of feeding and ecological functioning of the heart urchins in the benthic system. Ingestion selection factors for both component groups were relatively high, 5 to 9 for chlorophyll a and 9 to 130 for total fatty acids. The data point to at least partially different sources of the pigments and of the fatty acids. Next to algal detritus, small infauna relatively rich in fatty acids might be preferentially co-ingested with the detritus. Due to digestive breakdown and absorption, the concentrations of pigments and fatty acids were importantly decreased, indicating a rather high digestion efficiency for this subsurface deposit feeder, up to 80%. The results indicate that E. cordatum increases its energy acquisition by strong selectivity and a high digestive efficiency. Optimal foraging is likely to apply on deposit-feeding invertebrates in relatively food-rich coastal environments as much as it does in the food-poor deep-sea environment. Using chlorophyll a as a proxy for carbon, the contribution of the urchin population to the momentary benthic carbon budget was calculated at 7% to 42%.     

Stage-V copepodites of Calanus sinicus and Calanus jashnovi (Copepoda: Calanoida) in mesopelagic zone of Sagami Bay as identified with genetic markers, with special reference to their vertical distribution

We applied genetic makers to identify Calanus species occurring in Sagami Bay, Japan, in order to investigate their vertical distribution in the upper 1000 m. First, interspecific genetic distances of three gene loci, mitochondrial small ribosomal RNA (srRNA), nuclear internal transcribed spacers 1 (ITS1) and 2 (ITS2), were estimated from morphologically distinguishable adult females of Calanus sinicus, Calanus jashnovi and Calanus pacificus that were collected from Sagami Bay, the Kuroshio Extension and the Oyashio region, respectively. The highest levels of interspecific genetic distance were observed in srRNA, followed by ITS1 and ITS2. The intraspecific genetic distances within C. sinicus were much lower than the interspecific genetic distances, indicating that DNA sequences in these loci are consistent with the morphological differences. This information was used as a criterion for species identification based on DNA sequence variation, and allowed us to identify the fifth copepodites (CVs) or younger stages of these species. Next, the vertical distribution of Calanus species was investigated in Sagami Bay in May 2006, on the basis of a stratified sampling in the upper 1000 m. By applying the genetic markers, 23 individuals comprising all copepodite stages were allocated into either C. sinicus or C. jashnovi, and the small- and large-sized CVs were identified as C. sinicus and C. jashnovi, respectively. The total abundance of C. sinicus was highest at 0-50 m and decreased with depth. On the contrary, CV individuals of C. sinicus were abundant not only in 0-50 m but also below 200 m with minimum occurrences in 150-200 m depth. C. jashnovi was much less abundant than C. sinicus and comprised of only CIV and CV which occurred in the upper 100 m and deeper than 50 m depths, respectively. The abundance of C. sinicus in the 1000-m water column of Sagami Bay was at a level comparable to that in shelf waters, suggesting the importance of off-shelf individuals in the biological production and organic transport in the respective areas.     

Spatial spring distribution of the copepod Eurytemora affinis (Copepoda,Calanoida) in a restoring estuary,the Scheldt (Belgium)

The spatial spring distribution of Eurytemora affinis (adults and C5) in the Scheldt estuary (Belgium) brackish and freshwater reaches was studied in between 1996 and 2007. The bulk of the E. affinis population being generally situated in the brackish water reach (salinity > 0.5); we studied which environmental factors are responsible for its recent sporadic occurrence in the freshwater estuarine reach. Using PLS analysis, it is shown that its presence upstream is limited by a sufficient oxygen concentration (>4 mg l⁻¹) that is associated with temperature. Not only are the environmental conditions in the upstream zone important, but also the frequent presence of an O₂ minimum zone in the mid-estuary (O₂ min < 1.3 mg l⁻¹) seems to block the movement of the downstream E. affinis population in an upstream direction. Occasionally, the bulk of the population is however situated upstream. During these periods, high E. affinis abundance was also observed in the Durme tributary. Our findings suggest the possibility to use E. affinis as an “indicator” species of water quality, but also lead us to stress the necessity to consider conditions over the entire estuary when studying restoration effects, not exclusively in the zone of interest.     

基于复合模型的西南大西洋阿根廷滑柔鱼（Illex argentinus）时空分布研究

本文利用2003-2011年西南大西洋阿根廷滑柔鱼渔业数据和海洋环境数据,包括海表温度（sea surface temperature, SST）,海面高度（sea surface height, SSH）和叶绿素浓度（chlorophyll a, Chl a）,开发基于广义加性模型（GAM）和神经网络模型（NNM）的复合模型研究滑柔鱼资源时空分布。GAM用于选择关键影响因子,并分析与单位捕捞努力量渔获量（catch per unit effort, CPUE）的关系,NNM用于建立关键影响因子与CPUE之间的预报模型。结果表明：GAM选择的影响因子的偏差解释率为53.8%,空间变量（经度和纬度）,环境变量（SST、SSH、Chl a）均匀CPUE之间存在显著相关性。CPUE与SST和SSH之间为非线性关系,与Chl a之间为线性关系。NNM模型的MSE和ARV较低,其精度高且稳定。此复合模型也能够解释解释西南大西洋阿根廷滑柔鱼时空变化趋势和迁徙模式。     

Impacts of unconstrained effort: Lessons from a rock lobster (Jasus edwardsii) fishery decline in the northern zone management region of South Australia

The Northern Zone rock lobster fishery of South Australia is expansive, covering an area of ∼207,000 km². From 1970 to 2002 it was managed under input controls that relied heavily on restrictions to days-at-sea and size limits. In 2003, output controls in the form of individual transferable quotas with a total allowable commercial catch were also introduced. Fishery performance from 1980 to 2007 was analysed based on catch data and model outputs. Trends in catch and effort increased through the 1980s and 1990s while nominal catch rate remained relatively stable. However, from 1999 to 2003 catch decreased by 49% from 1001 to 503 ton and has remained at <500 ton since. Importantly, nominal effort did not decline comparatively, decreasing by only 12% from 1999 to 2007. Consequently, nominal catch rate decreased by 47.5% from 1.43 to 0.75 kg/potlift, over the same period. Logbook data revealed strong evidence of spatial expansion through the 1980s and 1990s which is likely to have masked declining lobster abundance and contributed to a “hyperstability” scenario in catch rates. It is suggested that increasing effective effort, driven by advances in fishing technology and vessel design, fuelled this expansion. Model outputs, which account for increases in effective effort, indicate that biomass has decreased by ∼68% since the 1980s. The results highlight the limitations associated with input controls in controlling effort during periods of spatial expansion. Further evidence from puerulus settlement data stresses the importance of conservative quotas for lobster fisheries where annual recruitment is low or highly sporadic.     

文蛤C型凝集素基因(Mm-Lec1)的克隆与表达分析

文蛤(Meretrix meretrix)是我国重要的滩涂养殖贝类,病害严重影响文蛤增养殖业,研究文蛤的免疫机制有助于解决文蛤的病害问题。C型凝集素(C-type lectin)参与先天免疫,在识别病原相关分子模式和激活体液免疫因子等方面发挥重要作用。本研究检索已构建的文蛤全长cDNA 文库,经过Blast比对得到了文蛤C型凝集素1(Mm-Lec1)基因的全长cDNA序列。Mm-Lec1序列全长586 bp,5'和3'非翻译区(UTR)的长度分别为21 bp和79 bp,开放阅读框长度为486 bp,编码161个氨基酸,分子量为18.65 kD,理论等电点为4.98。预测的氨基酸序列中含有信号肽(Met1-Ser19)、糖识别结构域(CRD)和糖结合位点(QPN)。Mm-Lec1的三级结构是紧凑型,含有β片层结构。同源性分析结果表明,Mm-Lec1与其他物种C型凝集素相似度在20%~32%;邻接法(Neighbor-Joining, NJ)进化树分析结果表明,Mm-Lec1与紫贻贝CTL 6和栉孔扇贝CTL A聚为一支。实时荧光定量分析结果显示,Mm-Lec1在文蛤鳃、肝胰腺、闭壳肌、外套膜、性腺和血细胞中均表达,其中鳃表达量最高,血细胞次之,性腺中表达量最少;在鳗弧菌(Vibrio anguillarum)刺激实验中,6 h时Mm-Lec1在血细胞中的表达量最低,48 h表达量最高,暗示Mm-Lec1参与文蛤抵御细菌入侵的免疫过程。     

Distributions of Calanus spp. and other mesozooplankton in the Labrador Sea in relation to hydrography in spring and summer (1995-2000)

We collected mesozooplankton samples in the upper 100 m in spring or early summer each year between 1995 and 2000 along a section from Hamilton Bank (Labrador) to Cape Desolation (Greenland), and along additional sections in spring 1997 and early summer 1995. The North Atlantic waters of the central basin were characterised by the presence of the copepods Calanus finmarchicus, Euchaeta norvegica and Scolecithrocella minor and euphausiids. Calanus glacialis, Calanus hyperboreus and Pseudocalanus spp. were associated with the Arctic waters over the shelves. Amongst the other enumerated groups larvaceans were concentrated over the shelves and around the margins. Amphipods, pteropods and the copepods Oithona spp. and Oncaea spp. showed no definable relationships with water masses or bathymetry, while the diel migrant ostracods and chaetognaths were confined to deep water. Metrida longa, also a strong diel migrant, and Microcalanus spp., a mainly deep water species and possible diel migrant, were both sometimes quite abundant on the shelves as well as in the central basin, consistent with their likely Arctic origins.Analysis of community structure along the section across the Labrador Sea indicated that stations could be grouped into five different zones corresponding to: the Labrador Shelf; the Labrador Slope; the western and central Labrador Sea; the eastern Labrador Sea and Greenland Slope; and, the Greenland Shelf. The boundaries between zones varied spatially between years, but community composition was relatively consistent within a given zone and a given season (spring versus early summer). The relationship between community composition and water masses was not entirely straightforward. For example, Labrador Shelf water was generally confined to the shelf, but in spring 2000 when it also dominated the adjacent slope zone, the community in the Labrador Slope zone was similar to those found in other years. Conversely, in spring 1997, when Arctic organisms were unusually abundant in the Labrador Slope zone, there was no increased contribution of shelf water. In addition, North Atlantic organisms were often found on the shelves when no slope or central basin water was present.Although other organisms were sometimes very abundant, the mesozooplankton preserved dry weight biomass was dominated everywhere by the three species of Calanus, which together always accounted for ≥70%. One species, C. finmarchicus, comprised >60% of the total mesozooplankton biomass and >80% of the abundance of large copepods in spring and summer throughout the central Labrador Sea. In western and central regions of the central basin average C. finmarchicus biomass was ca 4 g dry weight m⁻² and average abundance, ca 17?000 m⁻² over both seasons. Highest levels (ca 7 g dry weight m⁻², >100?000 m⁻²) occurred in the northern Labrador Sea in spring and in eastern and southwest regions in early summer. C. hyperboreus contributed ca 20% of the total mesozooplankton biomass in the central basin in spring and <5% in early summer, while C. glacialis accounted for <1%. Over the shelves, C. hyperboreus contributed a maximum of 54% and 3.6 g dry weight m⁻², and C. glacialis, a maximum of 29% and 1 g dry weight m⁻², to the total mesozooplankton biomass.