Temperature-, Salinity-, and Size-Dependent Winter Mortality of Juvenile Blue Crabs (<Emphasis Type="BoldItalic">Callinectes sapidus</Emphasis>)

The blue crab, Callinectes sapidus, is an ecologically and economically valuable species in Chesapeake Bay. Field surveys and laboratory experiments indicate that blue crab mortality is significant during severe winters. We applied a temperature and salinity-dependent survival model to empirical temperature and salinity data to explore spatial and interannual patterns in overwintering mortality. Harmonic regression analysis and geostatistical techniques were used to create spatially explicit maps of estimated winter duration, average temperature, average salinity, and resulting crab survival probability for the winters of 1990–2004. Predicted survival was highest in the warmer, saline waters of the lower Bay and decreased with increasing latitude up bay. There was also significant interannual variation with survival being lowest after the severe winters of 1996 and 2003. We combine the survival probability maps with maps of blue crab abundance to show how winter mortality may reduce blue crab abundance prior to the start of the harvesting season.     

Blue crab,<Emphasis Type="Italic">Callinectes sapidus</Emphasis>, response to the invasive common reed,<Emphasis Type="Italic">Phragmites australis</Emphasis>: Abundance,size, sex ratio,and molting frequency

Much effort has been directed recently at restoring marshes, by the removal of the invasive common reed,Phragmites australis, yet it is not clear how fish and invertebrates have responded either to the invasion ofPhragmites or to marsh restoration. The blue crab,Callinectes sapidus, uses marsh habitats during much of its benthic life. We investigated the response of blue crabs toPhragmites invasion and restoration efforts by comparing crab abundance (catch per unit effort), mean size and size frequency distribution, sex ratio, and molting of crabs in three physically similar areas differing in marsh vegetation;Spartina-dominated,Phragmites-dominated, and a treated area (Phragmites removed and now dominated bySpartina) in one marsh in the upper portion of Delaware Bay. Field sampling occurred monthly (April to November) from 1999 to 2001 using replicate daytime otter trawls in large marsh creeks. Crabs were categorized by carapace width into recruits (<30 mm), juveniles (30–115 mm), and adults (>115 mm). Juveniles dominated the system, representing 69.4% of all crabs. Similar monthly increases in mean size and molting patterns during the growing season (May–August) occurred inSpartina (natural and treated sites) andPhragmites sites suggesting that, subtidal habitats, used for molting, in these areas do not differ. More juveniles in the feeding molt stage (i.e., intermolt) than in other molt stages and more recruits predominantly in the feeding molt stage than adults were inSpartina, suggesting differences in the marsh surfaces used as feeding habitats withSpartina being preferred. Sex ratios of each life history stage were skewed towards males, but this was related to the low salinity of Alloway Creek, rather than marsh surface vegetation. Our results suggest that marsh surface vegetation influences the way blue crabs use marsh surface habitats, thus restoration efforts focusing on changing vegetation type may have a positive influence on blue crabs.     

Spatial and Interannual Variability in Winter Mortality of the Blue Crab (<Emphasis Type="Italic">Callinectes sapidus</Emphasis>) in the Chesapeake Bay

The blue crab, Callinectes sapidus, is an ecologically and economically valuable species in Chesapeake Bay. Field surveys and laboratory experiments indicate that blue crab mortality is significant during severe winters. We applied a temperature and salinity-dependent survival model to empirical temperature and salinity data to explore spatial and interannual patterns in overwintering mortality. Harmonic regression analysis and geostatistical techniques were used to create spatially explicit maps of estimated winter duration, average temperature, average salinity, and resulting crab survival probability for the winters of 1990–2004. Predicted survival was highest in the warmer, saline waters of the lower Bay and decreased with increasing latitude up bay. There was also significant interannual variation with survival being lowest after the severe winters of 1996 and 2003. We combine the survival probability maps with maps of blue crab abundance to show how winter mortality may reduce blue crab abundance prior to the start of the harvesting season.     

Differences in Prey Capture Behavior in Populations of Blue Crab (<Emphasis Type="Italic">Callinectes sapidus</Emphasis> Rathbun) from Contaminated and Clean Estuaries in New Jersey

Populations living in contaminated environments may exhibit behavioral changes that can alter predator–prey interactions. Blue crabs from the contaminated Hackensack Meadowlands (HM) had reduced ability to capture juvenile blue crabs and adult mummichogs (both active prey) compared with crabs from a reference site (Tuckerton (TK)). However, they consumed equivalent amounts of ribbed mussels and fiddler crabs, which are less active prey. Crabs may have reduced coordination rather than appetite or motivation. The lab data are supported by stomach analysis of field-caught crabs. HM crab stomachs contained ∼60% algae, plant material, detritus, and sediment and much lower weights of crab, fish, and other live food than TK crabs. However, the relative absence of bivalves in their diet may reflect reduced amounts available. When TK crabs were caged in HM or fed food from HM in the lab for 8 weeks, their prey capture ability declined significantly, and mercury in their muscle tissue increased significantly, indicating that environmental factors were responsible for the behavioral differences. When HM crabs were caged in TK or fed fish from TK in the lab for 8 weeks, their prey capture ability improved significantly. Mercury levels were variable and did not show a significant decrease.     

Effects of environmental stress on blue crab (<Emphasis Type="Italic">Callinectes sapidus</Emphasis>) harvests in Chesapeake Bay tributaries

Trotline blue crab (Callinectes sapidus) fishermen in the Patuxent, Chester, and Choptank tributaries of Chesapeake Bay set their gear in areas where the water quality, characterized by average mid-channel bottom dissolved oxygen, varies across the river systems and over the fishing season. Two harvest production models are developed to capture the potential effects of this source of environmental stress. One model treats the impact of water quality as influencing the availability of crabs to the gear, while the second treats the impact as another source of mortality. Both models are estimated assuming that dissolved oxygen has no effect on crab harvests above an upper threshold of 5 mg I⁻¹. Contrary to the mortality model, the availability model produces estimates that are consistent with our prior beliefs that productivity will be negatively impacted by poor water quality. To determine the percentage of the available crab stock in an area that will be harvested by a given amount of gear under different water quality conditions a simulation of the availability model is developed. The simulations show that a decline in average mid-channel bottom dissolved oxygen in the Patuxent River to 4 mg I⁻¹ may lead to a 48% decline in the percentage of the blue crab population in the area that will be harvested with the same amount of fishing effort.     

Blue Crab (<Emphasis Type="Italic">Callinectes sapidus</Emphasis> Rathbun, 1896) Settlement at Three Georgia (USA) Estuarine Sites

The blue crab, Callinectes sapidus Rathbun, 1896, represents the second most important fishery for coastal Georgia; yet, little is known about environmental forces that affect planktonic postlarval settlement in the region. Here, we describe a study to examine the physical mechanisms responsible for blue crab settlement in the extensive salt marsh system of coastal Georgia. Bottom and surface samplers were placed at three sites along a salinity gradient from a low-salinity site in the Altamaha River to a high-salinity area of the Duplin River, Sapelo Island, GA, USA during 2005. Megalopae and juvenile monitoring occurred from July through December. The majority of both megalopae (86.8%) and juvenile (89.3%) blue crabs were recovered in bottom samplers at the low-salinity Altamaha River site during August and early September. Few megalopae were collected at the surface of the Altamaha River or at the two higher-salinity sites in the Duplin and North Rivers. Downwelling winds were unable to explain all settlement events; however, winds with an onshore component regularly preceded settlement events. The use of a multiple-regression model revealed a lagged relationship (r = 0.5461, $ lag = 0–2 days $ lag = 0–2 days ) between wind events, temperature, salinity, maximum tidal height, and settlement.     

<Emphasis Type="Italic">Deepwater Horizon</Emphasis> Oil Spill Impacts on Salt Marsh Fiddler Crabs (<Emphasis Type="Italic">Uca</Emphasis> spp.)

The Deepwater Horizon oil spill was the largest marine oil spill in US waters to date and one of the largest worldwide. Impacts of this spill on salt marsh vegetation have been well documented, although impacts on marsh macroinvertebrates have received less attention. To examine impacts of the oil spill on an important marsh invertebrate and ecosystem engineer, we conducted a meta-analysis on fiddler crabs (Uca spp.) using published sources and newly available Natural Resources Damage Assessment (NRDA) and Gulf of Mexico Research Initiative (GoMRI) data. Fiddler crabs influence marsh ecosystem structure and function through their burrowing and feeding activities and are key prey for a number of marsh and estuarine predators. We tested the hypothesis that the spill affected fiddler crab burrow density (crab abundance), burrow diameter (crab size), and crab species composition. Averaged across multiple studies, sites, and years, our synthesis revealed a negative effect of oiling on all three metrics. Burrow densities were reduced by 39 % in oiled sites, with impacts and incomplete recovery observed over 2010–2014. Burrow diameters were reduced from 2010 to 2011, but appeared to have recovered by 2012. Fiddler crab species composition was altered through at least 2013 and only returned to reference conditions where marsh vegetation recovered, via restoration planting in one case. Given the spatial and temporal extent of data analyzed, this synthesis provides compelling evidence that the Deepwater Horizon spill suppressed populations of fiddler crabs in oiled marshes, likely affecting other ecosystem attributes, including marsh productivity, marsh soil characteristics, and associated predators.     

Evaluating salt marsh restoration in Delaware Bay: The response of blue crabs,<Emphasis Type="Italic">Callinectes sapidus</Emphasis>, at former salt hay farms

Marshes are important habitats for various life history stages of many fish and invertebrates. Much effort has been directed at restoring marshes, yet it is not clear how fish and invertebrates have responded to marsh restoration. The blue crab,Callinectes sapidus, uses marsh habitats during much of its benthic life. We investigated the response of blue crabs to marsh restoration by comparing crab abundance (catch per unit effort), mean size and size frequency distribution, sex ratio, and molt stages of crabs in recently restored marshes that were former salt hay farms to that of adjacent reference marshes with similar physical characteristics in the mesohaline portion of Delaware Bay. Field sampling occurred monthly (April–November) in 1997 and 1998 using replicate daytime otter trawls in large marsh creeks and weirs in smaller intertidal marsh creeks. Blue crabs were either equal or more abundant, the incidence of molting was in most months similar, and population sex ratios were indistinguishable in restored and reference marshes, suggesting that the restored areas attract crabs and support their growth. Site location had a greater effect on the sex ratio of crabs such that marshes closer to the mouth of the bay contained a higher percentage of adult female crabs. In each annual growing season (April–July), the monthly increase in crab size and, in some months (June–July), the incidence of molting at the restored sites was greater than the reference sites, suggesting that the restored sites may provide areas for enhanced growth of crabs. These results suggest that blue crabs have responded positively to restoration of former salt hay farms in the mesohaline portion of Delaware Bay.     

New thermoelastic parameters of natural <Emphasis Type="Italic">C</Emphasis>2/<Emphasis Type="Italic">c</Emphasis> omphacite

The compressibility at room temperature and the thermal expansion at room pressure of two disordered crystals (space group C2/c) obtained by annealing a natural omphacite sample (space group P2/n) of composition close to Jd₅₆Di₄₄ and Jd₅₅Di₄₅, respectively, have been studied by single-crystal X-ray diffraction. Using a Birch–Murnaghan equation of state truncated at the third order [BM3-EoS], we have obtained the following coefficients: V ₀ = 421.04(7) Å³, K _T0 = 119(2) GPa, K′ = 5.7(6). A parameterized form of the BM3 EoS was used to determine the axial moduli of a, b and c. The anisotropy scheme is β _c  ≤ β _a  ≤ β _b , with an anisotropy ratio 1.05:1.00:1.07. A fitting of the lattice variation as a function of temperature, allowing for linear dependency of the thermal expansion coefficient on the temperature, yielded α_V(1bar,303K) = 2.64(2) × 10⁻⁵ K⁻¹ and an axial thermal expansion anisotropy of α _b  ≫ α _a  > α _c . Comparison of our results with available data on compressibility and thermal expansion shows that while a reasonable ideal behaviour can be proposed for the compressibility of clinopyroxenes in the jadeite–diopside binary join [K _T0 as a function of Jd molar %: K _T0 = 106(1) GPa + 0.28(2) × Jd_(mol%)], the available data have not sufficient quality to extract the behaviour of thermal expansion for the same binary join in terms of composition.     

Foraging by Two Estuarine Fishes, <Emphasis Type="Italic">Fundulus heteroclitus</Emphasis> and <Emphasis Type="Italic">Fundulus majalis</Emphasis>, on Juvenile Asian Shore Crabs (<Emphasis Type="Italic">Hemigrapsus sanguineus</Emphasis>) in Western Long Island Sound

The Asian shore crab, Hemigrapsus sanguineus, is a recent and particularly successful introduction to the east coast of the USA. Little research has been done on the utilization of Asian shore crabs for food by native species, a potential form of biocontrol. Over a 4-year period, we examined the gut contents of cogeners, Fundulus heteroclitus and Fundulus majalis, collected from two embayments in western Long Island Sound for the presence of juvenile H. sanguineus. Frequency (percent) of occurrence of food items in the guts of both species varied over year and study site. Asian shore crabs were consumed more often by F. heteroclitus than by F. majalis, but predation pressure by both species was low. Only 13% of F. heteroclitus and 7.7% of F. majalis found with food in their guts had ingested Asian shore crab remains. Of those, 1/3 had consumed whole crabs; the rest had only autotomized appendages in their guts. The mean carapace width of juvenile Asian shore crabs ingested by F. heteroclitus was 3.59 ± 2.22 mm (N = 33). Results of our study on killifish predation support the hypothesis that H. sanguienus abundance is partly explained by reduced impact of native predators (i.e., the “enemy release hypothesis”). Predation pressure of other potential enemies on both planktonic and benthic stages of the Asian shore crab must be investigated, however, to understand the full impact of predation on H. sanguineus population dynamics.     

Toxicity effects of four typical nanomaterials on the growth of <Emphasis Type="Italic">Escherichia coli</Emphasis>, <Emphasis Type="Italic">Bacillus subtilis</Emphasis> and <Emphasis Type="Italic">Agrobacterium tumefaciens</Emphasis>

To offer an insight into the toxicity of nanomaterials (NM) on the growth of bacteria, Escherichia coli (E. coli), Bacillus subtilis (B. subtilis) and Agrobacterium tumefaciens (A. tumefaciens) were exposed to nano-Au, nano-Ag, nano-Fe and fullerene (C₆₀) in this study. As an effective bactericide, nano-Ag induced high toxicity on these three bacteria; C₆₀ could inhibit their growth; however, B. subtilis and E. coli could recover as exposure time extended. Nano-Au and nano-Fe had hardly any effect on three bacteria. A. tumefaciens showed the lowest resistance and slowest growth rate during exposure. Images obtained by scanning electron microscope (SEM) revealed that nano-Ag could cause damage to the cell structure of three bacteria at 1 μg/mL. Slight damage on E. coli was found when exposed to C₆₀, whereas no obvious physical damage was found after exposure to nano-Au or nano-Fe. It is assumed that surface activities of NM might be responsible for the different toxic effects on these bacteria.     

<Emphasis Type="Italic">BV I</Emphasis><Subscript><Emphasis Type="Italic">c</Emphasis></Subscript> photometry of RR Lyrae stars

We have obtained 26 372 CCD frames in the B, V, and I _c filters for 81 RR Lyrae stars in 2008–2010, using the 76-cm telescope of the South African Astronomical Observatory and the 40-cm telescope of the Cerro Armazones Observatory, North Catholic University (Chile) using an SBIG ST-10XME CCD camera. For 12 of these RR Lyrae stars, we also obtained 337 brightness measurements in the B and V bands in 2000–2001 using the 60-cm telescope of the High Altitude Mt. Maidanak Observatory (Republic of Uzbekistan). We present tables of observations, light curves, and improved light-curve elements for all these RR Lyrae stars. The Blazhko effect was detected for SU Hor.     

Utilization of <Emphasis Type="Italic">Spartina</Emphasis>- and <Emphasis Type="Italic">Phragmites</Emphasis>-Derived Dissolved Organic Matter by Bacteria and Ribbed Mussels (<Emphasis Type="Italic">Geukensia demissa</Emphasis>) from Delaware Bay Salt Marshes

Phragmites australis has been invading Spartina-alterniflora-dominated salt marshes throughout the mid-Atlantic. Although, Phragmites has high rates of primary production, it is not known whether this species supports lower trophic levels of a marsh food web in the same manner as Spartina. Using several related photochemical and biological assays, we compared patterns of organic matter flow of plant primary production through a key salt marsh metazoan, the ribbed mussel (Geukensia demissa), using a bacterial intermediate. Dissolved organic matter (DOM) was derived from plants collected from a Delaware Bay salt marsh and grown in the laboratory with ¹⁴C-CO₂. Bacterial utilization of plant-derived DOM measured as carbon mineralization revealed that both species provided bioavailable DOM to native salt marsh bacteria. Total carbon mineralization after 19 days was higher for Spartina treatments (36% ¹⁴CO₂ ± 3 SE) compared with Phragmites treatments (29% ±2 SE; Wilcoxon–Kruskal–Wallis rank sums test, P < 0.01). Pre-exposing DOM to natural sunlight only enhanced or decreased bioavailability of the DOM to the bacterioplankton during initial measurements (e.g., 7 days or less) but these differences were not significant over the course of the incubations. Mixtures of ¹⁴C-labeled bacterioplankton (and possibly organic flocs) from ¹⁴C-DOM treatments were cleared by G. demissa at similar rates between Spartina and Phragmites treatments. Moreover, ¹⁴C assimilation efficiencies for material ingested by mussels were high for both plant sources ranging from 74% to 90% and not significantly different between plant sources. Sunlight exposure did not affect the nutritional value of the bacterioplankton DOM assemblage for mussels. There are many possible trophic and habitat differences between Spartina- and Phragmites-dominated marshes that could affect G. demissa but the fate of vascular plant dissolved organic carbon in the DOM to bacterioplankton to mussel trophic pathway appears comparable between these marsh types.     

Structure modelling and cation partitioning of spinel solid solutions at high <Emphasis Type="Italic">T</Emphasis>,<Emphasis Type="Italic">P</Emphasis> conditions

This paper presents evaluation of cation distributions from diffraction data collected at high T, P, and is an extension of the spinel structure modelling procedure by Lavina et al. (2002). Optimised cation-to-oxygen distances are modified for thermal expansion and compressibility at T and P of interest following Hazen and Prewitt (1977) and Hazen and Yang (1999). The procedure is applied to literature data concerning hercynite, spinel s.s., Zn aluminate, Zn ferrite, magnetite and the (Fe₃O₄)_{1– x} (MgAl₂O₄) _x join. Calculated cation distribution is strongly affected by standard deviations in cell parameters and oxygen coordinates. The underestimated values often reported in the literature for powder profile refinements may strongly affect the cation distribution; however, if standard deviations are increased to physically realistic values, consistent results are obtained. For P up to 10 GPa, reasonable evaluations of cation distribution are obtained for spinel s.s., Zn aluminate and magnetite, whereas for Zn ferrite they are limited to 1.8 GPa. For P beyond 10 GPa, compressibility cannot be assumed to be linear; the relationship between cell parameter and pressure is well-defined, but the inaccuracy of oxygen coordinate prevents simple modelling of bond distances with pressure.     

The Intertidal Burrowing Crab <Emphasis Type="Italic">Neohelice</Emphasis> (=<Emphasis Type="Italic">Chasmagnathus</Emphasis>) <Emphasis Type="Italic">granulata</Emphasis> Positively Affects Foraging of Rodents in South Western Atlantic Salt Marshes

The role of positive and indirect interactions is often crucial in communities with intense abiotic stress such as salt marshes. The burrowing crab, Neohelice (=Chasmagnathus) granulata, is the dominant benthic macroinvertebrate of southwest Atlantic marshes (southern Brazil to Northern Argentinean Patagonia), having strong direct and indirect effects on marsh soil and, in consequence, on marsh vegetation and primary consumers. In this work, we investigate if this crab indirectly modifies habitat use by the granivorous rodents, Akodon azarae and Oligoryzomys flavescens, by increasing nutrient availability and thus enhancing seed production by the marsh plant Spartina densiflora. The study was conducted at the Mar Chiquita Coastal Lagoon, Argentina (37°32′ S). Rodent frequencies in S. densiflora were positively correlated with crab densities throughout the low and middle marsh. Additionally, the highest quality of S. densiflora and inflorescence density was recorded at the highest crab densities. Experimental manipulation of crab densities shows that N. granulata indirectly enhances the performance of S. densiflora (e.g., decreased fiber content and C/N ratios) and increases density of seeds. Moreover, N. granulata also facilitates S. densiflora seed availability to rodents by concentrating them in sediment mound at their burrows entrances. Experimental rodent exclusions showed that rodent species used S. densiflora seeds, a variable positively related to crab burrow density. Thus, our results show that N. granulata drives the granivorous rodent distribution and the intensity of seeds–rodent interaction trough facilitative and indirect interactions in marsh community.     

Toxicity of vegetable tannin extract from <Emphasis Type="Italic">Acacia mearnsii</Emphasis> in <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis>

Vegetable tannins are complex polyphenols, which occur widely in nature. Traditionally, natural tannins have been used for tanning leather. In Brazil, the main tannin-based products are obtained from Acacia mearnsii, which is a leguminous tree native to Southeastern of Australia, and the first seeds were brought to Brazil in 1928. The main cultivation of acacia was established in Rio Grande do Sul state due to the possibility of raw material for charcoal, adhesives to fuel and for tanning leather. The leather tanning processes based on plant tannins are thought to be less harmful than chromium-based tanning, and it has been used as a sustainable alternative. However, there is scarce information about the environmental impact of the leather tanning processes, with most studies reporting inhibitory effects against microorganisms at high doses and stimulatory and positive health effects at low concentrations. The aim of this study was to evaluate the toxicity of tannin preparations extracted from A. mearnsii in Saccharomyces cerevisiae. Vegetable tannin toxicity in yeast was tested using two tannin treatments in different concentrations. In general, the results showed toxicity of vegetable in yeast, BY4741 and gsh1Δ strains.     

Ecosystem Engineering Effects of <Emphasis Type="Italic">Aster tripolium</Emphasis> and <Emphasis Type="Italic">Salicornia procumbens</Emphasis> Salt Marsh on Macrofaunal Community Structure

This paper examines how perennial Aster tripolium and annual Salicornia procumbens salt marshes alter the biomass, density, taxon diversity, and community structure of benthic macrofauna, and also examines the role of elevation, sediment grain size, plant cover, and marsh age. Core samples were collected on a fixed grid on an intertidal flat in the Westerschelde estuary (51.4° N, 4.1° E) over 5 years (2004–2008) of salt marsh development. In unvegetated areas, macrobenthic biomass, density, and taxon diversity were highest when elevation was highest, benthic diatoms were most abundant, and sediment median grain size was smallest. In contrast, in salt marsh areas, macrobenthic biomass and taxon diversity increased with median grain size, while the effects of elevation and diatom abundance on macrobenthic biomass, density, and diversity were not significant. In fine sediments, macrofaunal community structure in the salt marsh was particularly affected; common polychaetes such as Nereis diversicolor, Heteromastus filiformis, and Pygospio elegans had low abundance and oligochaetes had high abundance. Marsh age had a negative influence on the density of macrofauna, and A. tripolium stands had lower macrofaunal densities than the younger S. procumbens stands. There were no significant effects of marsh age, plant cover, and vegetation type on macrobenthic biomass, taxon diversity, and community structure. The results highlight that ecosystem engineering effects of salt marsh plants on macrofauna are conditional. Organic enrichment of the sediment and mechanical hindering of macrofaunal activity by plant roots are proposed as plausible mechanisms for the influence of the salt marsh plants on macrofauna.     

Ecophysiology of the Olympia Oyster, <Emphasis Type="Italic">Ostrea lurida</Emphasis>, and Pacific Oyster, <Emphasis Type="Italic">Crassostrea gigas</Emphasis>

The native Olympia oyster, Ostrea lurida, was once abundant in many US Pacific Northwest (PNW) estuaries, but was decimated by human activity in the late nineteenth early to twentieth centuries. Having been the subject of only few modern, detailed studies, a dearth of basic physiological information surrounded O. lurida and how it compared to the now dominant, non-native Pacific oyster, Crassostrea gigas. Utilizing laboratory and in situ studies in Yaquina Bay, OR, we explored the clearance rates of both species across a wide range of conditions. Pacific oysters not only had greater size-specific clearance rates than Olympia oysters, but also had a lower optimum temperature. Clearance rates for both species were reduced at lower salinity, at lower organic content, and at higher turbidity. Clearance rate models were constructed for each species using three approaches: (1) a single mechanistic model that incorporated feeding response functions of each species to the effects of temperature, salinity, turbidity, and seston organic content based on laboratory studies; (2) another additive model in which the number and type of response functions from laboratory studies were allowed to vary; and (3) a statistical model that utilized environmental data collected during in situ feeding trials. Clearance rate models that correlated feeding activity with in situ environmental data were found to often better predict oyster clearance rates (based on Adj R ²) for both species in Yaquina Bay, OR, than mechanistic, additive models based on laboratory feeding response functions; however, in situ correlative models varied in accuracy by species and season. This work represents important first steps towards better understanding the physiological ecology of the native Olympia oyster and how it differs from introduced and now dominant Pacific oyster.     

Evaluation of <Emphasis Type="Italic">smtA</Emphasis> expression and <Emphasis Type="Italic">E. coli</Emphasis> survival against cadmium ions

Cadmium and other heavy metals lead to environmental danger, and these heavy metals are a great threat to human and other animal’s health. Investigation of the relationship between survival of E. coli and metallothionein smtA gene expression against cadmium ion is the goal of this research. Survival of recombinant bacteria containing smtA gene was analyzed against various concentrations of cadmium chloride salt using optical density (OD). At the resistive range, recombinant bacteria were subjected to different treatments. At the logarithmic phase of bacterial growth, sampling, RNA extraction and cDNA synthesis were performed and smtA gene expression was then analyzed by real-time PCR using designed primers for smtA gene and Amp resistance (as the calibrator gene). Relative gene expression was calculated using the ??C_t method. The resistive range against cadmium chloride was 0.5–0.7 mM (minimum inhibitory concentration (MIC = 0.5 mM)). Survival and gene expression analysis showed that in induced bacteria, smtA expression was increased significantly that in turn conferred resistance to cadmium chloride prominently. There was a direct relationship between increased smtA gene expression and survival of the recombinant bacteria. Therefore, our result may help to confront to cadmium metal environmental pollution using overexpression of smtA gene expression in recombinant bacteria.