Towards the application of the Water Framework Directive in Italy: Assessing the potential of benthic tools in Adriatic coastal transitional ecosystems

The potential of four benthic indices (AMBI/M-AMBI, BENTIX, BITS) was assessed in Italian coastal transitional ecosystems. The community composition showed a strong dominance of lagoonal, tolerant species, and out of more of 400 species found, only about 40 taxa were dominant. The full agreement of the four indices on an undegraded (Good or better) or degraded (Moderate or worse) status occurred only in 32.3% of stations. This study evidenced that BENTIX is inappropriate for eutrophic Adriatic lagoons, and that in such environments M-AMBI classification is actually too much dependent on diversity and richness, and seems unable to capture some peculiarities of benthic assemblages in transitional waters. AMBI and BITS gave similar classifications despite the different level of taxonomic identification needed. The unmodified use of these indices might impair accurate assessment of ecological quality status and decision-making on the managers’ point of view.     

An intercalibration of classification metrics of benthic macroinvertebrates in coastal and transitional ecosystems of the Eastern Mediterranean ecoregion (Greece)

Three coastal and three lagoonal sites located in Greece (Eastern Mediterranean) were selected to test and intercalibrate classification methods developed for benthic invertebrates ecological quality assessments. These methods were developed for the purposes of the European Water Framework Directive which is a European legislation adopted for the protection and improvement of the coastal and transitional waters. However, through testing these methods, this work addresses in general the issue of determining and comparing the ecological status of the coastal and transitional macrobenthic communities in Eastern Mediterranean ecosystems. Among methods tested were the biotic indices AMBI and BENTIX, the multivariate method M-AMBI and the biomass size structure index ISD in lagoonal sites only. ISD index is a rather new method developed especially for transitional ecosystems and in this contribution its performance is intercalibrated with the other benthic classification metrics. Comparison and intercalibration of the indices results in assessing the ecological quality status (EQS) are presented graphically and statistically performing the Kappa analysis. Results of the comparison and the indices' performance are evaluated based on the knowledge of the sites' environmental condition and baseline studies. Based on an extended dataset of coastal and transitional ecosystems benthic invertebrates, an evaluation of each index performance and effectiveness is attempted through an insight and comparative analysis of each methods' structure and design. Results showed that in these Eastern Mediterranean coastal sites the BENTIX index seems to give a more biologically relevant classification and gives a higher confidence level regarding the classification compared to the other indices. In the coastal areas AMBI showed a tendency for the "good" class classification, while the factorial M-AMBI gave more consistent results with the BENTIX. In the lagoonal sites the biotic indices tested were not proved efficient enough and the biomass based ISD index proved more appropriate for these ecosystems. AMBI showed the highest agreement with the ISD which is due to the better performance of this index in the slightly and moderately polluted lagoons, compared to the other indices. However, AMBI failed to classify the polluted lagoon, in which case the BENTIX gave a more relevant classification.     

Influence of oyster culture practices and environmental conditions on the ecological status of intertidal mudflats in the Pertuis Charentais (SW France): a multi-index approach

The ecological quality status (EcoQ) of intertidal mudflats constrained by Pacific oyster farming was assessed by single (H’, AMBI, BENTIX and BOPA) and multimetric (M-AMBI and average score) index approaches in the Pertuis Charentais (SW France). Fifteen sampling stations were monitored seasonally for sedimentological features and macrozoobenthos in 2004. Sediments affected by oyster biodeposits showed organic matter enrichment, and sediments from off-bottom culture sites had higher organic matter contents and lower redox potentials than sediments from on-bottom culture sites. Biotic indices consistently registered responses of macrozoobenthos to organic enrichment but there was only partial agreement between single index-derived EcoQs. The average score was better than M-AMBI and single indices for determining EcoQs. Accordingly, oyster farming alters intertidal macrozoobenthic assemblages moderately, and off-bottom cultures cause more disturbance than on-bottom cultures. Hydrodynamics and seasons may interact with culture practices in smothering/strengthening biodeposition-mediated effects through dispersal/accumulation of biodeposits.     

Ecological quality assessment of small estuaries from the Portuguese coast based on benthic macroinvertebrate assemblages indices

Benthic macroinvertebrates communities are the most consistently emphasized biotic component of aquatic ecosystems and are one of the biological indicators required for assessment by the European Water Framework Directive. In this context, several indices based on these communities have been developed in order to assess ecological quality of estuarine systems. In the present work we used AMBI, M-AMBI, BENTIX and BAT to distinguish ecological status of five small estuarine systems of the Portuguese south and southwest coasts. Although indices outputs did not differ between systems and sampling seasons, results indicated that the metrics in which these indices are based could differentiate community structures as a result of two main gradients that force these communities: the natural variability, and the anthropogenic impact.     

Is it possible to assess the ecological status of highly stressed natural estuarine environments using macroinvertebrates indices?

Several biotic indices have been proposed for the assessment of the ecological status of benthic macroinvertebrates in marine waters, although none have been generally accepted. When it comes to assessing highly stressed natural environments, such as estuaries, the controversy and uncertainty is much higher than for any given normal index. In this article, we test the behavior and suitability of different biotic indices proposed under the perspective of the Water Framework Directive (S, H, AMBI, M-AMBI, BQI, W-statistic, Taxonomic distinctness) for the assessment of estuaries in northern Spain. The low species richness and dominance of a few tolerant species in the characteristic community of these estuaries presented a challenge to the application of the biotic indices tested. Combined approaches that integrate different aspects of water quality and ecosystem functionality could increase the reliability of the ecological assessment of these transitional waters.     

Assessment of the ecological quality status of soft-bottoms in Reunion Island (tropical Southwest Indian Ocean) using AZTI marine biotic indices

The ability of the two synthetic marine biotic indices, AMBI and M-AMBI, to account for changes in the ecological quality of coastal soft bottoms of Reunion Island according to disturbances was assessed from macrobenthic samples collected in five sectors between 1994 and 2004. Samples were collected under non-perturbed conditions and at two sites subjected to heavy organic enrichment. Both indices are based on a classification of macrofauna into ecological groups (EG), and their transfer to tropical waters required some adaptations. These indices proved efficient in detecting a degradation of habitat quality. Their use resulted in the classification of all sites sampled between 1996 and 1998 as "good" or "high". M-AMBI nevertheless tended to result in the attribution of a slightly worse ecological quality status than AMBI. Together with an update of the EG species list for the Indian Ocean area, our results support the extension of both indices for the assessment of tropical soft bottoms.     

Ecological quality status of coastal benthic ecosystems in the Sea of Marmara

The macrofauna in the north Marmara Sea were identified and evaluated with univariate measures and biotic indices (BENTIX, AMBI). As expected, the diversity and species' variety decreased as the sediments became muddier and as the stress increased. The AMBI index failed to detect the spatial differentiation of the EcoQ between the sites whereas, the BENTIX index succeeded (in 70% of the cases) in producing an ecologically relevant classification reflecting the environmental pressures. Results suggested that risks of reduced species' richness and diversity from organic loading and other associated stressors in sediments should be relatively low at TOC concentrations < about 6 mg/g, high at concentrations>about 22 mg/g, and intermediate at concentrations in-between. It is suggested that these TOC critical points may be used as a general screening-level indicator for assessing the EcoQ in association with reduced biodiversity over coastal areas receiving organic wastes and other pollutants from human activities. It is further suggested that both assignment of species to ecological groups and classification scales for biotic indices (AMBI, BENTIX) for sites in the Mediterranean Sea should be readjusted so as to be closer related to environmental variables.     

Structuring factors of the spatio-temporal variability of macrozoobenthos assemblages in a southern Mediterranean lagoon: How useful for bioindication is a multi-biotic indices approach?

The authors investigated the impact of the extension of the El Kantra Channel on the composition and structure of macrobenthic assemblages in Boughrara Lagoon (Gulf of Gabes, Tunisia along with the use of 4 biotic indices (AMBI, BENTIX, M-AMBI and TUBI). Thirteen stations were sampled seasonally in 2012–2013. Forty-one species were found in 2012–2013 not recorded in 2009–2010, including 20 species of polychaetes belonging to the trophic groups of deposit-feeders and carnivores which are expected to increase in areas disturbed by organic pollution. During the survey, we recorded a high fish mortality, essentially caused by the development of harmful algal blooms (HAB) which increased organic matter deposition, thus inducing polychaete development. This seems to weaken the bio-indicating power of biotic indices used here which, paradoxically, classified all sampled stations at a high ecological status. A review of these indices and their applicability to all marine environments is recommended.     

Benthic indicators: analysis of the threshold values of ecological quality classifications for transitional waters

The effect of the modifications of the threshold values generally adopted for the five EcoQ (Ecological Quality) classes recognized by the European Water Framework Directive (WFD) for the most used benthic indicators and diversity indicators (AMBI, BENTIX, BOPA, BQI, H', ITI and M-AMBI) were studied to test whether it is possible to obtain the same or similar ecological classifications for transitional waters using these different indicators, and determine whether the current classifications can be improved. The analysis included: (i) the use of indicator equations, (ii) the use of reference indicators, and (iii) the use of indicator distribution laws. These investigations demonstrated that it was impossible to obtain an exact intercalibration of the ecological classifications with the selected indicators. However, some propositions to improve the actual classification were suggested.     

Response of single benthic metrics and multi-metric methods to anthropogenic pressure gradients, in five distinct European coastal and transitional ecosystems

In recent times many benthic indices have been proposed to assess the ecological quality of marine waters worldwide. In this study we compared single metrics and multi-metric methods to assess coastal and transitional benthic status along human pressure gradients in five distinct environments across Europe: Varna bay and lake (Bulgaria), Lesina lagoon (Italy), Mondego estuary (Portugal), Basque coast (Spain) and Oslofjord (Norway). Hence, 13 single metrics (abundance, number of taxa, and several diversity and sensitivity indices) and eight of the most common indices used within the European Water Framework Directive (WFD) for benthic assessment were selected: index of size spectra (ISS), Benthic assessment tool (BAT), Norwegian quality index (NQI), Multivariate AMBI (M-AMBI), Benthic quality index (BQI), (Benthic ecosystem quality index (BEQI), Benthic index based on taxonomic sufficiency (BITS), and infaunal quality index (IQI). Within each system, sampling sites were ordered in an increasing pressure gradient according to a preliminary classification based on professional judgement. The different indices are largely consistent in their response to pressure gradient, except in some particular cases (i.e. BITS, in all cases, or ISS when a low number of individuals is present). Inconsistencies between indicator responses were most pronounced in transitional waters (i.e. IQI, BEQI), highlighting the difficulties of the generic application of indicators to all marine, estuarine and lagoonal environments. However, some of the single (i.e. ecological groups approach, diversity, richness) and multi-metric methods (i.e. BAT, M-AMBI, NQI) were able to detect such gradients both in transitional and coastal environments, being these multi-metric methods more consistent in the detection than single indices. This study highlights the importance of survey design and good reference conditions for some indicators. The agreement observed between different methodologies and their ability to detect quality trends across distinct environments constitutes a promising result for the implementation of the WFD’s monitoring plans. Moreover, these results have management implications, regarding the dangers of misclassification, uncertainty in the assessment, use of conflicting indices, and testing and validation of indices.     

Effects of mariculture on macrobenthic assemblages in a western mediterranean site

The effects of solid organic wastes from a marine fish farm on sediment was tested using macrobenthic fauna as biological indicators. Impact on benthic fauna was evaluated in the vicinity of a fish farm in the Tyrrhenian Sea (Western Mediterranean) between July 2001 and October 2002. Changes in benthic community structure were investigated using multivariate, distributional and univariate analyses (diversity indices, AMBI and M-AMBI). The results showed sharp disturbance of assemblages under the cages and no effects in the area more than 25 m from the cages. Sediment alterations were related to an increase in farmed biomass and its wastes, as well as to low current speed that allowed accumulation of organic matter on the sea floor. It was possible to follow the ecological succession from slightly altered assemblages to heavily polluted ones in the very short period of a single fish fattening cycle (15 months).     

Threshold response of benthic macrofauna integrity to metal contamination in West Greenland

Sediment metal chemistry and benthic infauna surveys have been conducted over 33 years following a BACI protocol in relation to submarine tailings deposition (STD) from a lead-zinc mine in a western Greenland fjord system. We found clear predictable changes of benthic fauna composition in response to STD both temporally and spatially. Faunal re-colonization 15 years after mine closure, was slow and the impacted areas were still dominated by opportunistic species, although the most opportunistic ones (e.g. Capitella species) had decreased in importance. Concentration-response relations between sediment lead and faunal indices of benthic community integrity (e.g. the AMBI and DKI indices) indicated a threshold of ca. 200mg/kg, above which deterioration of faunal communities occurred. Above this threshold, diversity decreased dramatically and dominance of sensitive and indifferent species was substituted by tolerant or opportunistic species. Disposal of metal contaminated tailings may have long lasting effects on the biological system.     

Influence of seasonal variability in benthic invertebrate community structure on the use of biotic indices to assess the ecological status of a Portuguese estuary

The present study focused on the use of benthic invertebrate communities to assess the ecological quality of a Portuguese estuary characterized by strong seasonal changes and with eutrophication problems. Seasonal benthic samples were collected during a flood year and the methodology proposed by the WFD Portuguese group was used to classify benthic assemblages into five different quality classes. Factor analysis was applied to classify stations based on their physical-chemical status. Different classifications were obtained with different indices and among seasons and there was low agreement between indices and index-season interactions. Diversity indices were better correlated to eutrophication related variables than AMBI and ABC method. Predictable responses of benthic indices to anthropogenic stress symptoms were stronger during the dry period.     

Assessing benthic ecological impacts of bottom aquaculture using macrofaunal assemblages

Bottom aquaculture of bivalves is a high-yield culture method, which is increasingly adopted by shellfish farmers worldwide. However, the effects of bottom aquaculture on benthic ecosystems are not well-known. Manila clam (Ruditapes philippinarum), is a widely distributed bottom aquaculture mollusk species. To assess the ecological impacts of Manila clam bottom aquaculture, clams and other macrofaunal assemblages were investigated during four cruises (July and November 2011, February and May 2012) at six sampling sites in Jiaozhou Bay, China. Correlation analysis showed that macrofaunal assemblages had significant negative correlations with the abundance of Manila clams. However, according to the results of several biotic indices, a low disturbance was detected by Manila clam bottom aquaculture. In conclusion, AMBI (AZTI'S Marine Biotic Index) and M-AMBI (Multivariate AZTI Marine Biotic Index) indices are more suitable for assessing ecological quality than polychaete/amphipod ratios when the disturbance is slight, such as at a bivalve bottom aquaculture.     

Assessment of a Mediterranean shallow lentic ecosystem (Lake Pamvotis, Greece) using benthic community diversity: Response to environmental parameters

Macroinvertebrates play a key role in freshwater lentic and lotic ecosystems. The macroinvertebrate benthic community of a shallow Mediterranean lake (Lake Pamvotis, NW Greece) was studied. The benthic assemblage was sampled monthly at five sites during a period of 1 year (Apr. 1998–Mar. 1999). In addition hypolimnetic water quality variables were monitored over the same period at each site.

The aim of the study was (a) to describe the intra-annual and spatial variability in benthic communities, (b) to relate possible community changes to environmental conditions and (c) to evaluate the responses of the lake's ecological status on community indices.

The benthic fauna of Lake Pamvotis was found to be very limited with a total of 10 species belonging to five taxonomic groups. The oligochaete community comprised 80% of the total benthic fauna with Potamothrix bavaricus as a new record for the Lake Pamvotis and Potamothrix hammoniensis, being the dominant benthic species represented more than 61% of the total benthic fauna. Chironomus plumosus was the most abundant chironomid species contributing with about 6% of the total benthic fauna, and Chaoborus flavicans with 19% was the important dipteran. Almost all benthic species showed the same intra-annual seasonal pattern, with peak population densities during spring and early summer except P. hammoniensis which predominated during the whole sampling period. Dissolved oxygen and temperature seemed to be the main environmental factors affecting community indices.

Benthic communities are affected by human disturbances in Lake Pamvotis shifting their composition to more tolerant taxa, reflecting also the eutrophic to hypertophic character of the lake.     

Long-term trends in benthic habitat quality as determined by Multivariate AMBI and Infaunal Quality Index in relation to natural variability: a case study in Kinsale Harbour, south coast of Ireland

Benthic Ecological Quality Ratios (EQR) are important tools for assessing the ecological status of coastal and transitional water bodies. Here, we use spatial and time-series data from Kinsale Harbour, Ireland to examine the effects of sample processing methodologies on the outputs of two EQRs: Multivariate AMBI (M-AMBI) and Infaunal Quality Index (IQI).Both EQRs were robust to changes in sieve size from 1 mm to 0.5 mm, and to changes in the taxa identified in spatial calibration. Both EQRs classified habitat quality in Kinsale as generally Good or High with no evidence of significant change over the time series (1981-2006). IQI classified the ecological status as higher than M-AMBI.There was a significant relationship between IQI and M-AMBI in spatial calibration, but no significant relationship between them in time series. Further research into the behaviour of EQRs in relation to natural variability over long time-scales is needed to discriminate anthropogenic impacts reliably.     

Benthic biodiversity indices versus salinity gradient in the southern Baltic Sea

The need to assess the environmental status of marine and coastal waters according to the EU Water Framework Directive (WFD) encouraged the design of specific biotic indices to evaluate the response of benthic communities to human-induced changes in water quality. In the present study three of these indices, the traditional Shannon Wiener Index (H') and the more recently published AMBI (AZTI' Marine Biotic Index) and BQI (Benthic Quality Index), were tested along a salinity gradient in the southern Baltic Sea. The comparison of the three indices demonstrates that in the southern Baltic Sea the ecological quality (EcoQ) classification based on macrozoobenthic communities as indicator greatly depends on the biotic index chosen. We found a significant positive relation between species number, H', BQI and salinity resulting in EcoQ status of "Bad", "Poor" or "Moderate" in areas with a salinity value below 10 psu. The AMBI was less dependent on salinity but appear to partly overestimate the EcoQ status. Presently none of these biotic indices appear to be adjusted for application in a gradient system as given in the southern Baltic Sea. A potential approach describing how to overcome this limitation is discussed.     

Ecological Quality Status of the soft-bottom communities on the algerian coast: General patterns and diagnosis

Between 1995 and 2001, the soft-bottom communities along the 1180 km of the Algerian coast were sampled in nine gulfs and 12 harbours, providing a total of 655 samples. Eight macrozoobenthos-based biotic indices (S, N, H′, BQI, AMBI, BENTIX, BO2A and ITI) were selected to describe the general patterns of the coastal water quality status and to establish a quality diagnosis for the different zones subjected to anthropogenic pressure (e.g., harbour construction, industrial and urban pollution). Reference values were determined for each of the eight indices selected by analyzing the indices’ parameter distribution. The Ecological Quality Ratio (EQR) was estimated for each index, resulting in an EQR Mean Score and an EQR Bad Score. From these EQR, we defined an EQS for each sample. The agreement between these EQS was analysed using the Kappa method in order to propose a survey strategy for the Algerian coastal waters that would take into account the soft-bottom biological compartment. The results clearly indicate that high and good quality assessments are prevalent in the gulfs, while quality assessments in harbours vary greatly from bad to good. The effect of pollution observed in the harbours can be classified in two main groups, according to when they were constructed and their relative degree of openness to the sea, which permits better water circulation and probably dilutes the pollution.