Influence of bioturbation by Hediste diversicolor on mercury fluxes from estuarine sediments: a mesocosms laboratory experiment

Mercury, with its reactive forms being the most deleterious for the trophic chains, has been identified as a major pollutant in a few confined bodies of the coastal zone. Due to feeding, burrowing, and bioirrigation activities, infauna are known to play a crucial role in the biogeochemical processes of contaminants. The main goal of the present study is to evaluate the effects of Hediste diversicolor bioturbation on mercury fluxes from estuarine sediments in a mesocosms laboratory experiment. Additionally, an attempt was made to establish a relationship between the amount of remobilised mercury to the water column and the degree of contamination of the sediments using a mercury contamination gradient. The present experiment demonstrated that the bioturbation activity caused by the gallery-diffuser H. diversicolor did not influence the remobilisation of mercury (in dissolved reactive forms) from the sediment to the water column. The concentration of dissolved reactive mercury in the water column also did not reflect the degree of contamination in the sediments. The results obtained were in accordance with the sediment characteristics of the Mondego Estuary and Ria de Aveiro (Portugal), since they are very rich in organic matter content, iron/manganese total and hydrous oxides. These physicochemical characteristics of the sediments may partially justify the retention of mercury by these systems, even when they are subjected to bioturbation. In conclusion, sediments with high organic matter content and a high concentration of iron/manganese hydrous oxides allowed for efficient retention of mercury, and the bioturbation process did not seem to affect the system. Another conclusion from this study is that the remobilisation of mercury by bioturbation to the water column is not a fast process, requiring more than 24h. This study constitutes an important work in the area of the effects of bioturbation on mercury remobilisation. Considering the toxicity of mercury for the biota, it is essential to evaluate the real magnitude of mercury processes occurring in estuarine systems in order to obtain essential information on metal behaviour.     

Influence of macroinvertebrates on physico‐chemical and microbial processes in hyporheic sediments

The objective of this study was to measure the effects of invertebrates on the physical characteristics and microbial processes in hyporheic sediments. We investigated the impacts of an assemblage of three taxa (asellids, chironomid larvae, and tubificid worms) on sediment distribution, water fluxes, sediment organic carbon, biofilm (attached bacteria) characteristics, and O₂, dissolved organic carbon NO₃^?, NO₂^?, and NH₄⁺ concentrations in slow filtration sand–gravel columns. The results showed that invertebrates clearly modified the distribution of particles in the sediment column, probably because of the structures (tubes, macropores, and faecal pellets) produced by the three taxa in the sediment. Our assessment of water fluxes indicated that invertebrate activities led to an increase in the porosity of the sediment columns. In addition, aerobic (O₂ consumption) and anaerobic (denitrification and fermentative decomposition of organic matter) microbial processes occurring in the sediment were stimulated in the presence of invertebrates. Finally, the present study demonstrates that invertebrates can act as ecosystem engineers in heterogeneous sediments that are under the influence of an advective flux of water. The solute residence time increased in columns containing the faunal assemblage. Micro‐organisms used more dissolved organic matter and nutrients in the presence of invertebrates because invertebrate activities increased the contact between the biofilm and water. We conclude that engineering by invertebrates in natural conditions modifies characteristics of the hyporheic zone and thereby enhances both the porosity of the sediment and the solute transport across the benthic interface. Copyright © 2002 John Wiley & Sons, Ltd.     

Alteration of physico-chemical and microbial properties in freshwater substrates by burrowing invertebrates

The hyporheic interstitial provides habitat for many different organisms – from bacteria to burrowing invertebrates. Due to their burrowing and sediment reworking behaviour, these ecosystem engineers have the potential to affect hyporheic processes such as respiration and nutrient cycling. However, there is a lack of studies that characterize the interactions between bioturbators, physico-chemical habitat properties and microbial communities in freshwater substrates. In a standardized laboratory experiment, we investigated the effects of three functionally different bioturbators, duck mussels (Anodonta anatina, Linnaeus 1758), mayfly nymphs (Ephemera danica, Müller 1764) and tubificid worms (Tubifex tubifex, Müller 1774), on the physico-chemical conditions and bacterial communities in hyporheic substrates. We hypothesized that different invertebrates distinctly alter habitat conditions and thus microbial community composition, depending on the depth and the manner of burrowing. A. anatina and E. danica caused an increase in interstitial oxygen concentration, whereas strong declines in oxygen concentration and redox potential were detected in the T. tubifex treatment. These effects on physico-chemical habitat properties were even detectable in open water. Mussels and tubificid worms also significantly influenced the composition of bacterial communities in the hyporheic zone. A loss or replacement of bioturbators in stream ecosystems due to anthropogenic habitat alterations is expected to result in shifts in microbial community compositions, with effects on nutrient fluxes, pollutant degradation and benthic food webs. An understanding of the effects of functionally different native and invasive bioturbators is crucial to predict changes in stream ecosystem functioning.     

Analytical-modeling analysis of how pore-water gradients of toxic metals confer community resistance

We develop a mechanistic explanation of how microbial communities are able to protect themselves from toxicity from inflowing metal concentrations much higher than the metal-toxicity thresholds of individual microorganisms. We propose a general bio-protection mechanism, of widespread applicability to microbial communities, by which some bacteria induce pore-water metal gradients by producing ligands that bind the metal toxicant, reducing the toxicant’s concentration to non-inhibitory levels for much of the community. Sulfate-reducing communities are a good example of community-based bio-protection. In particular, we develop analytical solutions to derive metal-resistance criteria for two distinctly different systems displaying gradient-based resistance: permeable reactive barriers (PRBs), which are advection dominated, and sediments, which are diffusion dominated. In advection-dominated systems, the most significant variables influencing the development of static gradients are groundwater velocity and the rate of ligand production. By transporting the toxicant into the PRB and by preventing ligand from moving upgradient, a fast groundwater velocity can overwhelm the chemical gradient bio-protection mechanism. Likewise, the stability of a chemical gradient bio-protection scheme increases in proportion to the rate of ligand generation. In diffusion-dominated systems, resistance depends on the rate of ligand generation and the diffusion length for movement of metal into the sediment. For both cases, we derive quantitative stability criteria that include the phenomena described here. These criteria demonstrate that diffusion-dominated systems offer greater potential for gradient-based metal resistance than do advection-dominated systems. When diffusion controls transport, metal movement into the reactive zone can be slowed down, and a greater fraction of the ligand is available for reaction with the metal, since it is not swept away by advection.     

Effects of copper and the sea lice treatment Slice on nutrient release from marine sediments

Copper-based antifoulant paints and the sea lice treatment Slice^® are widely used, and often detectable in the sediments beneath farms where they are administered. Ten-day, whole sediment mesocosm experiments were conducted to examine how increasing sediment concentrations of copper or Slice^® influenced final water column concentrations of ammonium-nitrogen (NH₄-N), nitrate + nitrite-nitrogen (NO_X-N) and phosphate-phosphorus (PO₄-P) in the presence of the non-target, benthic organisms Corophium volutator and Hediste diversicolor. Nominal sediment concentrations of copper and Slice^® had significant effects on the resulting concentrations of almost all nutrients examined. The overall trends in nutrient concentrations at the end of the 10-day incubations were highly similar between the trials with either copper or Slice^®, irrespective of the invertebrate species present. This suggests that nutrient exchange from the experimental sediments was primarily influenced by the direct effect of copper/Slice^® dose on the sediment microbial community, rather than the indirect effect of reduced bioturbation/irrigation due to increased macrofaunal mortality.     

Toxicity of sediment-incorporated drilling fluids

The 24, 96, or 168h LC₅₀s of four used drilling fluids or barite incorporated into sediment were determined in toxicity tests with lancelets (Branchiostoma caribaeum), a benthic chordate. Concurrent to LC₅₀ determinations, EC₅₀s were calculated from the number of lancelets that did not burrow into contaminated sediments. Observations of the burrowing behaviour allowed quantitation of effects after 24h exposures to each of the drilling fluids whereas lancelet mortality was sufficient to calculate 24h LC₅₀s for only one drilling fluid. Drilling fluids were less toxic to lancelets when incorporated into sediments than to mysids (Mysidopsis bahia) or benthic invertebrate communities in water-column exposures.     

Erodibility of soft freshwater sediments in Markermeer: the role of bioturbation by meiobenthic fauna

The Markermeer is a large and shallow man-made freshwater lake in the Netherlands, characterized by its high turbidity. As part of a study aiming to mitigate this high turbidity, we studied the water–bed exchange processes of the lake’s muddy bed. The upper centimeter’s–decimeter’s of the lake bed sediments mainly consists of soft anoxic mud. Recent measurements have proved the existence of a thin oxic layer on top of this soft anoxic mud. This oxic layer, which is much easier to be eroded than the anoxic mud, is believed to be related with Markermeer’s high-turbidity levels. Our hypothesis is that the thin oxic layer develops from the anoxic mud, enhanced by bioturbation. Actually, we will demonstrate that it is the bioturbated state of the bed that increases its erodability, and not the oxidation state of the sediments. In particular, we will refer to bioturbation caused by meiobenthic fauna. The objective of this study is therefore to determine the influence of the development of the thin oxic layer on the water–bed exchange processes, as well as to establish the role of bioturbation on those processes. This is done by quantifying the erosion rate as a function of bed shear stresses, and at different stages of the development of the oxic layer. Our experiments show that bioturbation increases the rate at which Markermeer sediments are eroded by almost an order of magnitude. The short-term fine sediment dynamics in Markermeer are found to be driven by the complex and highly dynamic interactions between physics, chemistry, and biology. Finally, the long-term fine sediment dynamics are driven by the erosion of the historical deposits in the lake’s bed, which is only possible after bioturbation, and which leads to an increase of the stock of sediments in the lake’s muddy bed.     

Alteration of bottom roughness by benthic organisms in a sandy coastal environment

This work deals with the potential influence of benthic communities on the sediment dynamics of the coastal zone, and specifically with the modifications to bottom roughness caused by communities and their effects on wave propagation across the coastal profile. Time-series of video observations of the sea bottom on the Ebro delta coast were analysed in order to estimate the bottom roughness associated with physical and biological morphological components and the sediment reworking rates caused by epifaunal organisms. Biological roughness was mainly caused by ophiuroids and tanatocenosis of bivalve and gastropod shells, which changed their abundance during the study period. The total biological roughness (K_bio) ranged between 0.27 and 0.81 cm and represented a significant part (<20%) of the total form drag roughness. Flattening of ripples caused by bioturbation was observed under low-energy conditions. Surface sediment perturbation and bioturbation rates were also estimated. Based on these observations a wave propagation model was applied in order to carry out a sensitivity analysis of the significance of biological roughness on wave dissipation in the study area under different wave conditions.     

Seasonal changes of microbial populations in the sediments of the basins of Lugano and Agno

This research was carried out with the aim to explore the heterotrophic microbial population of two sediments in different oxic conditions of the Lake of Lugano (Lago di Lugano). The values of the viable bacterial counts found in our sediment samples were typical for an eutrophic lake.The increase in the proportion of anaerobic to aerobic bacteria at 30 °C observed in the sediment samples of Agno may reflect the depletion of oxygen concentrations in the water column.The generaAeromonas, Pseudomonas, Bacillus andClostridium, as well as strains belonging to the Coryneform-group, represented the major taxonomic groups of heterotrophic bacterial communities in the water-sediment interface.     

Does groundwater influence the sediment fauna beneath a small, sandy stream?

Gradients in the sediment fauna comprising groundwater (GW) and hyporheic taxa were investigated in the sand/silt-bottomed Marbling Brook in Western Australia. The structure of sediment invertebrate assemblages from Marbling Brook sediments and the adjacent GW were studied at five sites over 1 year and hydrological interactions were characterized using a suite of abiotic factors. Although all five stream sites were upwelling, the sites differed in the degree of hydrological interactions between GW and surface water. Sediment fauna taxa abundances were not correlated with any of the abiotic factors investigated and did not change gradually with depth. Faunal assemblages in the stream sediments were distinct from faunal assemblages in alluvial GW. While water exchanged between alluvial GW and sediment water, as shown by abiotic factors, the distinct differences in faunal assemblages indicated an unpredicted complexity in the catchment with fundamentally different hydrogeological situations on the decimetre scale. Sampling in sandy sediments needs to take this small-scale variability into account.     

Advective flow in sediments under the influence of compaction

Abstract

Models on flow and transport in surface water sediments currently neglect compaction, although it is well understood that compaction is one of the major processes below the free fluid-sediment interface. Porosity changes in the sediment layers, as a result of compaction, are measured in almost all probes: porosity decreases with the distance from the surface water-sediment interface. This paper provides a rigorous derivation of basic flux terms for a frame of reference that is moving with the fluid-sediment interface. It is shown how burial rate, interface velocity, velocities of fluid and solid phase and porosity are connected—under steady-state conditions. It turns out that porosity and the velocities in a one-dimensional column can be directly computed from each other. These findings are important not only for the understanding of compaction-driven flow itself; they are crucial for all studies on storage and transport of chemical components in sediments. As mass fluxes across the sediment-water interface may be affected, there is an indirect link on surface water quality, making these findings relevant also for research on eutrophication of surface water bodies and/or on biogeochemical cycles.     

Bioturbation: minimal effects on the magnetic fabric of some natural and experimental sediments

Magnetic fabric measurements have been performed on three suites of sediment samples to contrast biologically disturbed and undisturbed sediments. The first of these analyses includes samples from laminated, relatively undisturbed and bioturbated, totally disturbed horizons found in an Athabasca Oil Sand core. The second includes samples from biologically undisturbed sediments from Mammoth Cave in Kentucky. The third includes evaluation of the evolution of a magnetite horizon which was established by the author in December of 1982 in a biologically active tidal flat on Sapelo Island, Georgia. Changes in this magnetite horizon were monitored by periodic subsampling.Results from these suites of samples indicate that the measured magnetic fabric in bioturbated sediments may exhibit primary sedimentary characteristics similar to undisturbed sediments. Such primary indicators include the anisotropy of magnetic susceptibility (AMS) parametersV used by Graham, always greater than 45°,Q used by Rees and Hamilton, always less than 0.69, and a subhorizontal magnetic foliation plane. I infer that the presence of apparently primary fabric distributions in these bioturbated sediments indicates that physical, not biological factors are responsible for the observed fabric. These factors include dewatering and simple, low magnitude compaction. The data indicate that it cannot be assumed, a priori, that poor fabric distributions are the result of bioturbation. On the contrary, for the Sapelo Island experiments, the magnetic fabric actually improved with bioturbation and the Athabasca bioturbated magnetic fabric is very similar to that from the Athabasca laminated sediment.Data from the Sapelo Island, Georgia, tidal flat experiment are interpreted to indicate that long-axis AMS alignments develop within the sediment. Such alignments are the result of water movement through sediment which exhibits increased porosity due to high rates of burrowing. It is also observed that RM precision improves during the experiment in spite of bioturbation.     

水丝蚓(Tubificid worms)扰动对磷在湖泊沉积物-水界面迁移的影响

为探讨水丝蚓(Tubificid worms)扰动对磷在湖泊沉积物-水界面间迁移的影响,选取太湖梅梁湾与大浦口两富营养化湖区为研究对象,通过室内培养实验,利用Rhizon间隙水采样器等技术,研究了水丝蚓扰动对太湖沉积物-水界面理化性质及溶解活性磷(SRP)在界面通量的影响.结果表明水丝蚓扰动能够增大表层沉积物含水率、氧化还原电位,减小间隙水中Fe2+浓度.水丝蚓没有显著改变梅梁湾间隙水中SRP浓度,同时促进了梅梁湾沉积物中SRP向上覆水的释放;但水丝蚓显著减小了大浦口间隙水中SRP浓度,并抑制了大浦口沉积物中SRP向上覆水的释放.水丝蚓扰动对磷在沉积物-水界面间迁移的不同影响可能是由沉积物中Fe2+含量差异较大造成的.     

Characterization of benthic types in the lower Medway estuary,Kent

A number of sediment parameters, including particle size and redox potential profiles, were measured during an ecological study of the benthic invertebrate macrofauna of the lower Medway estuary, Kent. The results proved more meaningful in characterizing the sediment habitats of the benthic invertebrate fauna than did measurements on the overlying water.     

Polychlorierte Dibenzo-p-dioxine, -furane (PCDD/F) und Analoga in Oberflächensedimenten und datierten aquatischen Sedimentkernen

Polychlorinated Dibenzo-p-dioxins, -furans (PCDD/F) and Analogues in Surface Sediments and Dated Aquatic Sediment Cores Aquatic sediments are the final sinks of unintentionally formed PCDD/Fs. Still not known are the conditions of formation of PCDD/Fs in the 8120 years old sediments in Japan and in 350 to 400 years old sediments in the Baltic. Sediments are means of source identification if transformation processes are taken into consideration in view of hydrological conditions. PCDD/Fs have been analysed 30 km from the source in sediments and over a distance of 50 km in benthos indicating a remarkable bioaccumulation potential. Elaborated data of the PCDD/F sediment contamination are missing as well as information on internal diagenetic processes, interactions at the sediment/water interface, and on the aerobic and anaerobic biodegradation and bioavailability of PCDD/Fs in sediments. Quality criteria for sediments and aquatic ecosystems remain to be elaborated.     

A Coupled Groundwater–Surface Water Modeling Framework for Simulating Transition Zone Processes

There is an identified need for fully representing groundwater–surface water transition zone (i.e., the sediment zone that connects groundwater and surface water) processes in modeling fate and transport of contaminants to assist with management of contaminated sediments. Most existing groundwater and surface water fate and transport models are not dynamically linked and do not consider transition zone processes such as bioturbation and deposition and erosion of sediments. An interface module is developed herein to holistically simulate the fate and transport by coupling two commonly used models, Environmental Fluid Dynamics Code (EFDC) and SEAWAT, to simulate surface water and groundwater hydrodynamics, while providing an enhanced representation of the processes in the transition zone. Transition zone and surface water contaminant processes were represented through an enhanced version of the EFDC model, AQFATE. AQFATE also includes SEDZLJ, a state‐of‐the‐science surface water sediment transport model. The modeling framework was tested on a published test problem and applied to evaluate field‐scale two‐ and three‐dimensional contaminant transport. The model accurately simulated concentrations of salinity from a published test case. For the field‐scale applications, the model showed excellent mass balance closure for the transition zone and provided accurate simulations of all transition zone processes represented in the modeling framework. The model predictions for the two‐dimensional field case were consistent with site‐specific observations of contaminant migration. This modeling framework represents advancement in the simulation of transition zone processes and can help inform risk assessment at sites where contaminant sources from upland areas have the potential to impact sediments and surface water.     

An experimental study on erodibility of intertidal sediments in the Yellow River delta

The erodibility of intertidal sediments is an important factor affecting coastal erosion.In July and October 2008,in situ measurement of erodibility of the surficial sediment were conducted using a recirculating flume at 20 tidal flat experiment sites along the seashore of the Yellow River delta.At the same time,the characteristics of sand ripples and biogenic features on the tidal flat were observed and the physical-mechanical sediment properties such as bulk density,water content,grain size distribution,plasticity,penetration resistance,shear strength and compressibility,were measured.By field measurement,it is obtained that the critical erosion shear stress of the surficial sediment on the tidal flat varies between 0.088 Pa and 0.254 Pa.The factors influencing sediment erodibility are complicated because of physical and biological reworking after the sediment deposited.There’s a positive correlation between shear strength and critical erosion shear stress.The burrowing crabs’ activities changed the sediment microtopography and made the sediment have greater roughness,and that is one possible reason for the higher erodibility.The formation of scour pits on the tidal flat correlates with the heterogeneous erodibility of the surficial sediment.     

The Impact of Snail (Bellamya aeruginosa) Bioturbation on Sediment Characteristics and Organic Carbon Fluxes in an Eutrophic Pond

A mesocosm experiment was conducted for 32 days in an eutrophic pond to study the effects of the bioturbation of the freshwater snail, Bellamya aeruginosa, on the benthic environment and to further understand cycling of organic carbon in water containing algal blooms. Chlorophyll‐a (chl‐a), phaeopigment, and organic matter contents of sediment, sediment oxygen consumption (SOC), and dissolved organic carbon (DOC) fluxes were determined on day 1, 16, and 32, respectively. The SOC decreased on day 16 and increased on day 32 significantly with the increase in snail density. DOC fluxes showed a net sediment uptake in all enclosures throughout the experiment. DOC fluxes in the high and mid density treatments were lower than those of the control. The concentrations of chl‐a and phaeopigment in the sediment increased significantly with snail density, indicating that the presence of snails reduced the biomass of phytoplankton. The results suggest that freshwater snails, B. aeruginosa, could influence the algal biomass (chl‐a) of small water bodies by their bioturbation effects on sediment characteristics and the fluxes of organic carbon.     

How representative are subfossil assemblages of Chironomidae and common benthic invertebrates for the living fauna of Lake De Waay,the Netherlands?

The distribution of benthic invertebrates and their subfossil remains was examined within the basin of De Waay, a dimictic, eutrophic lake in the Netherlands. We focused on Chironomidae, but also report the abundances of 11 invertebrate groups that potentially produce chitinous remains that are preserved in the fossil record, although their remains could only be identified at a coarser taxonomic resolution. Most living invertebrates sampled in different seasons were constrained to the littoral zone, with the exception of a few taxa (Ceratopogonidae, Chaoborus flavicans, and Chironomus) that are adapted to low oxygen conditions in the seasonally anoxic profundal zone. In contrast, assemblages of invertebrate remains in lake surface sediments were similar in the entire lake basin, suggesting that considerable numbers of invertebrate remains are transported and redeposited off-shore in Lake De Waay, due to its steep bathymetry. These results indicate that a single sediment sample obtained from the centre of this lake contains subfossil invertebrate remains originating from the entire lake basin. In Lake De Waay, the majority of taxa found in the living assemblages were identified as remains in lake surface sediments, at least for the Chironomidae that could be identified at a similar taxonomic level in living and subfossil assemblages. Of the total 44 chironomid taxa found in Lake De Waay, 35 taxa occurred in the living assemblages and 34 taxa occurred in the subfossil assemblages. Thirty chironomid taxa occurred both as living and subfossil specimens, and on average these 30 taxa represent 94% of the specimens encountered in a sediment sample. Five rare chironomid taxa present as living larvae were not detected in the subfossil assemblages. Conversely, eight rare and four common chironomid taxa were found in subfossil remains, but not in living assemblages. Our results indicate that subfossil assemblages in surface sediment samples provide spatially integrated and representative samples of the living assemblage. However, a combined approach examining both the living benthic invertebrate fauna and invertebrate remains in lake surface sediments will potentially give a more complete and detailed overview of benthic invertebrates in a lake ecosystem than an approach based exclusively on one of these groups.