Climate variability and planktonic communities: The effect of an extreme event (severe drought) in a southern European estuary

As a consequence of climate change, flood and drought events are increasing in frequency throughout the world. Nevertheless, knowledge of the effects on zooplankton estuarine communities is still scarce. The present study aimed to examine zooplankton ecology over two contrasting environmental conditions: regular years and extreme dry years, in a shallow temperate southern European estuary, the Mondego Estuary (Portugal). Monthly samples were carried out during three consecutive years: 2003 characterized as a regular temperate year concerning precipitation and river flow, and an extremely dry period during 2004–2005. The spatial and temporal structure of the biological data was evaluated by a three-mode principal component analysis (PCA), which allowed us to distinguish three distinct ecological areas based on their biological composition and their relationship with hydrologic parameters. The severe drought in 2004–2005 was responsible for spatial shifts in the estuary regarding zooplankton community and interannual variability, with an increase in abundance and diversity during the period of low freshwater flow. This freshwater flow regime influenced the composition of the zooplankton community at the most upstream section of Mondego estuary (zone 3), with a replacement of the freshwater community by one predominantly dominated by estuarine organisms. The occurrence of such estuarine community contributed to the increase in zooplankton abundance which is ascribed to the estuarine species Acartia tonsa. The comparison with previous data obtained for this estuarine ecosystem, demonstrated the occurrence of a different scenario at times of high freshwater flow, being defined the existence of two sub-estuarine systems, the north and south arm, presenting the south one the highest values of abundance.     

Impact of climate variability on ichthyoplankton communities: An example of a small temperate estuary

Recent variations in the precipitation regime across southern Europe have led to changes in river fluxes and salinity gradients affecting biological communities in most rivers and estuaries. A sampling programme was developed in the Mondego estuary, Portugal, from January 2003 to December 2008 at five distinct sampling stations to evaluate spatial, seasonal and inter-annual distributions of fish larvae. Gobiidae was the most abundant family representing 80% of total catch and Pomatoschistus spp. was the most important taxon. The fish larval community presented a clear seasonality with higher abundances and diversities during spring and summer seasons. Multivariate analysis reinforced differences among seasons but not between years or sampling stations. The taxa Atherina presbyter, Solea solea, Syngnathus abaster, Crystallogobius linearis and Platichthys flesus were more abundant during spring/summer period while Ammodytes tobianus, Callionymus sp., Echiichthys vipera and Liza ramada were more abundant in autumn/winter. Temperature, chlorophyll a and river flow were the main variation drivers observed although extreme drought events (year 2005) seemed not to affect ichthyoplankton community structure. Main changes were related to a spatial displacement of salinity gradient along the estuarine system which produced changes in marine species distribution.     

Changes in zooplankton diversity and distribution pattern under varying precipitation regimes in a southern temperate estuary

The influence of climate variability on the diversity and distribution patterns of zooplankton communities was investigated in the Mondego estuary (Portugal) during four consecutive years characterized by highly variable precipitation and, consequently, river flow regime. Monthly samples were collected along the estuarine gradient at five sampling stations. Seasonal, inter-annual and spatial distributions were evaluated by multivariate analyses and three diversity indices were applied (Species number, Shannon Diversity and Average Taxonomic Distinctness). A two-year drought period presented significant differences in salinity values, especially in 2005 (extreme drought event). During the study period, copepoda was the main dominant group and Acartia tonsa the most abundant species, with the exception of autumn 2006, where high abundances of the cladoceran Penilia avirostris were noticed. Multivariate analysis indicated that zooplankton communities changed from a pre- to a post-drought period indicating the influence of hydrological parameters in communities' structure. The dry period was associated with an increase in zooplankton density, a reduction in seasonality and higher abundance and prevalence of marine species throughout the year. Seasonally, winter/spring communities were distinct from those in summer/autumn. Spatially, salinity-associated differences between upstream and downstream communities were reduced during the drought years, but during the post-drought year, these differences were detected again.     

Changes in the fish fauna of a tropical Australian estuary since 1990 with reference to prawn predators and environmental change

As part of a study of the reasons for declining commercial banana prawn catches in the Weipa area of the Gulf of Carpentaria, and in order to assess whether changes in predator numbers may be a factor influencing prawn numbers, the species composition, numbers and biomasses of fishes in the Embley estuary were re-examined in February 2005 for comparison with the results of a study between 1986 and 1990. The new study duplicated previous methods and used the same sampling sites and the same gear employed during February sampling periods from 1986 to 1990. Overall, the species diversity and catch rates, as well as the numbers of penaeid prawn predators had changed little over 20 years. The overall catch rate for 2005 was 37.4 g m⁻¹ h⁻¹, not significantly different from the overall catch rate of 32.8 g m⁻¹ h⁻¹ (SE 6.6) for the period from 1987 to 1989. The results are discussed in relation to environmental factors and climate change, as well as the substantial declines in prawn catches, which had fallen from over 800 tonnes per annum prior to 1998, to about 70 tonnes per annum.     

珠江口及邻近水域鱼类群落结构研究

根据1986～1987年珠江口及邻近水域底拖网鱼类采样资料,运用系统聚类与排序等多元分析方法和群落多样性指数,研究该水域鱼类群落结构及其与环境因素的关系,分析结果把该水域鱼类划分为淡水、河口和沿岸3个群落,分别位于莲花山,虎门河道、珠江河口伶仃洋和珠江口浅海水域,各群落结构组成呈沿盐度梯度而成带分布的格局.淡水群落结构简单稳定,沿岸群落结构比较复杂,河口群落受水动力过程和生物活动影响最大,群落结构的季节变化较为显着.     

The impact of extreme turbidity events on the nursery function of a temperate European estuary with regulated freshwater inflow

Estuaries are used as nursery grounds by numerous marine species despite being usually subject to strong anthropogenic disturbances. Abundances of marine recruits (fish and crustacean decapods) and their main prey (mysids) were monitored by monthly sampling, from June 1997 to February 2009, in the lower reaches of the Guadalquivir estuary (SW Spain). During that period, unusually high and persistent turbidity events (HPTEs) were observed twice. Both HPTEs started with strong and sudden freshwater discharges after relatively long periods of very low freshwater inflow. Data from this time-series were used to test the hypothesis that HPTEs may negatively impact the nursery function of estuaries either by decreasing prey availability or by decreasing survival/arrival of marine recruits. During HPTEs, the commonest mysid (Mesopodopsis slabberi), a key species in the estuarine food web, showed a significant decrease in abundance. Likewise, some marine recruits that prey on M. slabberi and whose peaks of abundance within the estuary occur in summer–autumn (Engraulis encrasicolus and Pomadasys incisus) were less abundant during HPTEs. It is also suggested that HPTEs might have triggered a shift in the distribution of the most euryhaline prey (Neomysis integer) and predator (Dicentrarchus punctatus and Crangon crangon) species, towards more saline waters. This could have contributed to an increase in the inter-specific competition (for food/habitat) within the estuarine nursery area. The results discussed in this study call attention to the need to reduce as much as possible the anthropogenic pressures that may stimulate the occurrence of high and persistent turbidity events (HPTEs) in order to preserve the nursery function of temperate estuaries.     

Environmental factors structuring fish composition and assemblages in a small macrotidal estuary (eastern English Channel)

The fish assemblage structure was analyzed along an estuarine gradient of a small macrotidal estuary (the Canche, France). Fishes were collected every two months between May 2006 and July 2007 from 12 sampling stations using a 1.5-m beam trawl with a 5 mm mesh size in the cod end. To complement this information, sampling was also performed using 15-m fyke nets (8 mm mesh size in the cod end). For each sample, abiotic (temperature, salinity, pH, oxygen, turbidity, river flow, wind speed and depth) and biotic (macro crustacean species abundances) were recorded. Throughout the study, 28 fish species belonging to 20 families were collected. Fish catches were dominated by juveniles, especially Young-Of-the-Year (YOY) for the majority of the species. According to the Index of Relative Importance (IRI), common goby Pomatoschistus microps, flounder Platichtys flesus, sprat Sprattus sprattus, sea-bass Dicentrarchus labrax and plaice Pleuronectes platessa were the most abundant species, together accounting for 99.2% of the total IRI. Estuarine residents (ER = 66.2%) and marine juvenile migrants species (MJ = 31.4%) were the most important ecological guilds. The structure of the fish assemblage and its relationship to environmental variables was examined using multivariate techniques. Cluster and non-metric multidimensional scaling (nMDS) analysis defined six distinct groups in the Canche estuary, which are discriminated by specific species (SIMPER). Spatio-temporal variations in fish assemblage structure reflect the density peaks of the most abundant species. Spearman rank correlations and canonical correspondence analysis (CCA) showed that among the ten environmental variables examined, temperature, salinity and Crangon crangon (a potential predator for YOY fish or prey for older ones) are the three most important factors influencing fish species richness and abundances. Our observations reinforce the idea that certain fish species may have different life history styles in different geographic areas. The present study highlights the necessity of a better knowledge of the connectivity between estuaries and adjacent marine areas. The Canche constitutes an important ecosystem for fishes and as it is subject to little anthropogenic disturbance; its ichthyofauna can be viewed as a reference or normal assemblage for small temperate macrotidal estuaries.     

Response of the mesozooplankton community of the St Lucia estuary,South Africa,to a mouth-opening event during an extended drought

Mesozooplankton samples were collected between March 2005 and November 2008 in St Lucia, the largest estuarine lake system in South Africa. St Lucia experienced an extended period of drought before and during the present study. This drought led to natural closing of the estuary mouth as a result of flood-tide marine sediment deposition in 2002. In March 2007 the mouth was washed open by exceptionally high tidal and wave conditions. This resulted in an influx of a large volume of seawater. The mouth closed again in August 2007. Before opening of the mouth salinities in the Estuary were below 10 and large parts of North Lake dried up while South Lake retained a relatively stable waterbody with salinities between 10 and 30. When the mouth opened seawater flooded the system and salinities changed to about 35. After the mouth had closed again in August 2007 salinities increased in the lakes and decreased in the Estuary. The mesozooplankton community was dominated by copepods during all sampling sessions, especially by the estuarine calanoids Pseudodiaptomus stuhlmanni and Acartia natalensis. Mean mesozooplankton densities were significantly higher in South Lake before the mouth opened in March 2007. While zooplankton density decreased when the mouth opened species richness increased with the influx of coastal marine species, especially in the Estuary. Overall zooplankton densities declined progressively as salinity increased to hypersaline levels after mouth closure. Multivariate analyses supported significant differences between the lakes and the Estuary in terms of mesozooplankton community composition. Taxa mostly responsible for the similarities within and dissimilarity between sections of the system were the copepods P. stuhlmanni and A. natalensis with the meroplankton, crab zoeae and mollusc larvae, also contributing significantly after the mouth-opening event.     

长江口张网鱼类群落结构特征及月相变化

为了解长江口鱼类群落结构的现状及变化特征,用张网作业对长江口2010年5月至2011年4月12个月鱼类群落进行了调查。结果1周年共记录56种鱼类,以鲈形目(27种)和鲱形目(10种)种类数目最多。鱼类区系为典型的亚热带动物区系,只出现暖水种(25种)及暖温种(31种)2种适温类型。鱼类种类数目以底栖鱼类(26种)和中上层鱼类占多数(21种),底层鱼类数目较少(9种)。丰度或生物量均由少数几种鱼类占优势。根据鱼类生态类群,海洋洄游性鱼类及河口性鱼类占据种类数目的主要地位,而生物量或丰度均由海洋洄游性鱼类占据主导。每网平均种类数目的最大值和最小值分别出现在7月(18.3种)和1月(7.2种),每网丰度最大值和最小值出现在11月(2 272尾/网)和1月(71尾/网),生物量的最大值出现在9月(11 892g/网),最小值出现在1月(351g/网),而主要种类丰度的时间分布差异也较大;基于丰度计算的Shannon-Wiener多样性指数及Simpson优势度集中指数在时间上也有较大差异,NMDS非度量多维尺度分析显示根据相似性鱼类群落在时间上可分为4组,相邻月一般相似性较近,但2010年12月和2011年1月相似性较小。此外,多元回归分析表明,在径流量、盐度及水温3个环境因素中,引起张网鱼类群落丰度时间变化的主要影响因素是水温。鉴于当前长江口张网捕捞努力量有增加趋势,为保护长江口鱼类群落,需要控制过高的捕捞努力量。     

Impact of climate and hydrology on juvenile fish recruitment towards estuarine nursery grounds in the context of climate change

Larvae of various coastal fish undergo immigration from spawning grounds towards estuarine nurseries. Several environmental factors can have an important impact on survival at this stage making it crucial for recruitment. Generalized linear models were applied in order to investigate the relation between river drainage, sea surface temperature (SST), NAO index and the North-South wind component intensity, over the two months prior to the estuarine colonization peak, and the densities of Platichthys flesus, Dicentrarchus labrax, Diplodus vulgaris and Diplodus bellottii in the nursery grounds based on a discontinuous historical dataset (from 1978 to 2006), for the Tagus estuary. The relation between SST over the 12 months prior to the estuarine colonization peak and fish densities in the nurseries was also investigated, as it integrates the periods of spawning stock maturation, spawning and larval immigration. While SST over the prior 12 months was negatively correlated with the abundance of P. flesus, it was positively correlated with the abundance of D. bellottii. Abundance of D. vulgaris was positively correlated with SST in the two months prior to the estuarine colonization peak, while the abundance of D. labrax was positively correlated with river drainage. The relations between SST and the abundance of P. flesus, a cold-water species with declining densities, and the subtropical species D. bellottii and D. vulgaris, which are increasing in abundance, are indicative of species abundance alterations related to climate warming. Dicentrarchus labrax will probably also be affected by climate change because of lowered precipitation and consequently river drainage.     

海草床鱼类群落结构的时空变化及其在热带海草床中的育幼

本文以印尼北苏拉威西东部的潟湖为对象,研究了热带海草床鱼类群落的种类组成和时空变化。研究发现当地鱼类的香农-威纳指数在1.57-3.69之间多样性相对较高。在科水平,天竺鲷科的丰度（8.27 ind./（100 m²））和生物量（28.49 g/（100 m²））最高。在物种水平,侧带天竺鲷（Apogon lateralis）的丰度最高,环纹圆天竺鲷（Sphaeramia orbicularis）的生物量最大。对于物种的空间变化,潟湖湖顶、湖中和湖口首先聚类在一起,这可能是由于基质类型引起的。干季和湿季的鱼类种类、丰度和生物量均比转换季高,这可能是由较强的季风造成的,强季风为鱼类提供了更适宜的环境和食物。93.1%的鱼类的最大体长小于它们的性成熟体长,暗示了海草床是很多鱼类的育幼场。因此,保护海草床对渔业和资源的可持续利用至关重要。     

Fish community structure of the St Lucia Estuarine System under prolonged drought conditions and its potential for recovery after mouth breaching

The St Lucia Estuarine System, South Africa, has been under pressure due to recent drought conditions, which have led to closure of the mouth, extremely low lake levels and hypersaline conditions. The estuary mouth closed in June 2002 and remained so for almost 5 years before being breached by Cyclone Gamede in May 2007. After mouth closure in August 2007, salinities in South and North Lake gradually increased to reach highs of 68 at the end of 2008, while salinities in the Narrows gradually declined during the study. Fish were sampled biannually during 2006–2008 with seine and gill-nets at six sites throughout the system. A total of 20,422 fish from 72 species were recorded, with the number of species and CPUE gradually decreasing from the Narrows throughout the system to Hells Gate in the upper parts of the system. The fish community was dominated by the freshwater species Oreochromis mossambicus, and two estuarine species, Ambassis ambassis and Hyporamphus capensis. The fish community was dominated in terms of species numbers by marine spawning species, but in terms of fish abundance by freshwater and estuarine breeding species. Recruitment of post-larvae of 20 marine species into the system occurred following opening of the mouth in March 2007, highlighting the importance of the system as a nursery area for marine species. The fish community was structured by spatial differences between sampling areas and between the three main compartments of the system, and not by temporal changes during the study period.     

The influence of habitat structure on juvenile fish in a New Zealand estuary

Estuarine and sheltered coastal habitats that contain physical structure are potentially important nurseries for juvenile fish. Many of these structured habitats, however, are potentially vulnerable to stressors such as elevated turbidity. Quantifying the benefits that structured habitats provide to juvenile fish may therefore be an important step in the management process. We investigated the value of structured habitat for juvenile fishes in northeastern New Zealand, using artificial seagrass units (ASUs) with varying blade density. ASUs were predominantly settled by juvenile snapper (Pagrus auratus) and spotty (Notolabrus celidotus). The density of both snapper and spotty was greatest on ASUs with the highest blade density. For snapper, a gradient in abundance was present (with higher abundance closer to the harbour mouth), suggesting either a gradient in the supply of recruits or a potential recruitment shadow effect. The size distribution of juvenile snapper (12–70 mm fork length) was very similar on both sampling trips, despite the 2‐month interim period, suggesting an ontogenetic habitat shift dependent on size. The condition of juvenile snapper from ASUs with the highest blade density was also greater than the other ASU treatments. Overall, these results provide new empirical evidence that habitats with physical structure within shallow estuarine systems are important to early stage juvenile fishes such as snapper, and indicate that the location‐specific context of that habitat is also likely important.     

Structure and dynamics of distinct fish assemblages in three reaches (upper,middle and lower) of an open tropical estuary in Brazil

We collected fishes and environmental variables in three zones (upper, middle and lower) of a small open tropical estuary during flood tide. The aim was to test for differences in fish assemblages along a gradient from freshwater to marine waters and to detect any seasonal variation in fishes and environmental variables across these zones. A total of 111 species (18 in the upper, 50 in the middle and 66 in the lower estuary) were recorded, forming three distinct fish assemblages, with the family Eleotridae dominating in the upper, Gerreidae in the middle, and Sciaenidae in the lower estuary. Only two species (Geophagus brasiliensis in the upper and the middle zones, and Eucinostomus argenteus in the middle and the lower zones) composed more than 1% of the total number of individuals in more than a single zone. Short‐term (tidal) changes in salinity in the middle estuary were associated with different assemblages in the three estuarine zones, even in winter, when the differences in salinity are lowest between the middle and the lower zones. Seasonal variation in salinity was irrelevant, except in a protected sidewater lagoon in the middle estuary. Low salinity seasonal change may be related to the lack of seasonal variation in the structure of fish assemblages in all estuarine zones.     

Effects of substratum type on fish assemblages in shallow areas of a tropical estuary

While there is already a comprehensive understanding of the effects of environmental variables, such as dissolved oxygen, temperature and salinity, on the structure, biomass and metabolism of aquatic biota in estuarine habitats, the effect of sedimentation, a harmful underlying factor, remains unclear. The aim of this study was to assess the differences in fish assemblages along the freshwater to salt water gradient of a large tropical estuary, and to evaluate the effects on them of habitat disturbance associated with shallow water sedimentation in the intertidal areas. Fish and environmental variables were recorded in the upper, middle and lower salinity zones of the estuary at ebb tide in both the dry and wet seasons. Sediment samples associated with different levels of habitat disturbance were analysed using granulometry, and their organic content and dissolved oxygen levels were quantified. Water temperature, salinity, pH and dissolved oxygen levels were also measured. Habitat disturbance was found to be correlated with the density, biomass and richness of fish assemblages. A total of 77 species were recorded, forming two distinct fish assemblages, with the Eleotridae family dominating in the upper zone, and Gerreidae, Gobiidae and Tetraodontidae the most common in the middle and lower estuary. Changes in the structure of fish assemblages, including reductions in density, biomass and richness, were associated with disturbance to natural features, where muddy sediment was replaced by sandy sediment and the quantity of organic matter fell. Atherinella brasiliensis was the species which showed a preference for the disturbed areas in the middle and lower zones, while Dormitator maculatus showed a preference for them in the upper estuary. They may be taken as indicators of habitat disturbance due to shallow sedimentation.     

The influence of habitat availability on juvenile fish abundance in a northeastern New Zealand estuary

Management of fish populations is often focused on the exploitation of adult fish. Maintaining the habitat requirements of all life stages may also be an important consideration. We investigated the value of structured habitat to juvenile fishes within a northeastern New Zealand harbour using artificial seagrass units (ASUs). Specifically, we deployed ASUs across treatments with high vs. low habitat manipulations. We hypothesised that if the abundance of recruiting juvenile fishes was greater on the high habitat availability treatments this would suggest that the availability of habitat was limiting juvenile fish abundance. Our analyses were focused on the four most abundant fishes that settled on our ASUs: snapper (Pagrus auratus); spotty (Notolabrus celidotus); trevally (Pseudocaranx dentex); and an assemblage of pipefish species. For snapper, spotty and pipefish, abundance was greater on the high habitat availability treatments. This result would be unlikely to occur if the availability of juvenile fishes was limiting, suggesting that juvenile fish abundance is more likely to be limited by habitat. In terms of spatial gradients, spotty abundance and size increased with distance into the harbour. The spatial gradient present for spotty indicates the importance of placing the habitat dependency of juvenile fish into a landscape context. Overall, these results demonstrate that maintaining structured habitats may be an important consideration for some valuable inshore fish populations in northeastern New Zealand.     

Feeding ecology and ontogenic diet shifts of juvenile fish species in an inverse estuary: The Sine-Saloum,Senegal

We examined the diet of juvenile fish of four species – Eucinostomus melanopterus (Gerreidae), Ethmalosa fimbriata (Clupeidae), Monodactylus sebae (Monodactylidae), and Sarotherodon melanotheron (Cichlidae) – between their appearance on the nursery ground and the end of the recruitment season, when they began to shift to deeper parts of the estuary. Fish were collected from the Sine-Saloum, an inverse estuary in Senegal, West Africa. Sampling was conducted at six sites located along the salinity gradient. The study was conducted in the context of an inverse estuary where increasing salinity leads to the disappearance of mangroves.     

Spatial and temporal patterns in the hyperbenthic community structure in a warm temperate southern African permanently open estuary

The spatial and temporal patterns in the hyperbenthic community structure (>500 μm) in the warm temperate, permanently open Kariega Estuary situated along the south-eastern coastline of South Africa was investigated monthly over a period of twelve months. Data were collected using a modified hyperbenthic sledge at six stations along the length of the estuary. Physico-chemical data indicate the presence of a constant reverse salinity gradient, with highest salinities measured in the upper reaches and lowest at the mouth of the estuary. Strong seasonal patterns in temperature, dissolved oxygen and total chlorophyll-a (chl-a) concentration were evident. Total average hyperbenthic densities ranged between 0.4 and 166 ind.m⁻³ in the lower net and between 0.2 and 225 ind.m⁻³ in the upper net. Hyperbenthic biomass values ranged between 0.02 and 11.9 mg.dry weight.m⁻³ in the lower net and between 0.02 and 17.4 mg.dry weight.m⁻³ in the upper net. Both the lower and upper nets were numerically dominated by decapods (mainly brachyuran crab zoea) with the exception of June and July 2008 when mysids (mainly Mesopodopsis wooldridgei) dominated, comprising up to 72.4 ± 58.14% of the total abundance in the lower net. A redundancy analysis (RDA) indicated that 99.2% of the variance in the hyperbenthic community structure could be explained by the first two canonical axes. Axis one, which accounted for 96.8% of the total variation detected in the ordination plot was highly correlated with sedimentary organic content and to a lesser extent the chl-a concentration within the Kariega Estuary. The correlations with the second canonical axis (2.4%) were less obvious, however, salinity and seston concentration were weakly correlated with this axis.     

Long-term stability of the fish assemblages in a warm-temperate South African estuary

Little is known about long-term changes in estuarine fish populations and related environmental variations. Fishes in the temporarily open/closed East Kleinemonde Estuary were sampled bi-annually, in summer and winter, using seine and gill nets between December 1994 and July 2005. A total of 18 families, represented by 33 species, were recorded. The 10 most abundant species caught were consistently recorded in catches each year, but CPUE of individual species varied on an annual basis and this can often be related to mouth state. Multivariate analyses of the annual marine fish community identified two distinct groups, with more species recorded during years that succeeded spring (September to November) mouth-opening events than in years following no mouth-opening events in spring. Interannual community stability (IMD) and seriation (IMS) also increased from the years following no opening events in spring to the years that succeeded spring opening events. These results highlight the importance of the timing of mouth opening to the marine fish community in a temporarily open/closed estuary. This study reinforces the importance of long-term studies to understanding community changes in estuaries caused by environmental variations over different time scales.