Recruitment Ecology of Burrowing Shrimps in US Pacific Coast Estuaries

Recruitment is a strong determinant of year class strength and adult population density especially for sessile benthic invertebrates where post-settlement mortality and competition are low or relatively stable over time. A series of surveys were undertaken to characterize recruitment and post-settlement processes for two species of burrowing shrimps, Neotrypaea californiensis and Upogebia pugettensis in order to determine how they influenced broader adult populations in US west coast estuaries. On average, U. pugettensis decapodids settled earlier (April–July), recruited almost exclusively to areas with conspecific adults, and grew more rapidly during their first summer than N. californiensis. Neotrypaea californiensis decapodids settled and recruited over a longer period (June–November) and were distributed across the tidal flat. While initially more abundant in areas with conspecific adults, they also either survived better or redistributed as small juvenile shrimp to areas where adults were absent. Linear relationships were found between abundance of newly recruited (0+ age class) shrimp and that of older 1+ shrimp a year later. Positive slopes were close to one for N. californiensis but less than one for U. pugettensis, suggesting lower survival. Annual recruitment varied dramatically but was more consistent for both species in Yaquina Bay. Patterns in strong recruitment years amongst estuaries, particularly for U. pugettensis, suggest the presence of multi-estuary metapopulations linked via larval dispersal. These results have important implications for shrimp population management including control for shellfish aquaculture, but also conservation of estuarine habitats due to the strong influence of these ecosystem engineers on the benthic community.     

Optimal benthic macrofaunal sampling protocol for detecting differences among four habitats in Willapa Bay,Washington, USA

As part of an effort to estimate estuarine habitat values with respect to ecological indicators of benthic macrofaunal community condition, an optimal (effective and least costly) sampling protocol (sample unit size [area x depth], sieve mesh size, and sample number [n]) was determined. The goal was to use four ecological indicators (number of species, abundance, biomass, and fish and crab prey abundance) to detect differences among four intertidal habitats in Willapa Bay, Washington, United States. The four habitats were eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), and ghost shrimp (Neotrypaea californiensis). Four sample unit areas (0.005, 0.010, 0.015, and 0.020 m²), two sample unit depths (0–5 and 0–10 cm), and two sieve mesh sizes (1.0 and 0.5 mm) were evaluated. The optimal sampling protocol was defined as the least costly protocol capable of reliably (statistical power, 1?β≥0.80) detecting significant (α=0.05) differences among ≥4 of the 6 pairwise habitat contrasts by ANOVA on all four ecological indicators. The relative cost of each sampling protocol was estimated as a direct function of the sample unit size and number and the cost-in-processing-time ratios of 1 (5 cm deep):1.7 (10 cm deep) and 1 (≥1.0 mm macrofauna size fraction); 2.5 (≥0.5 mm macrofauna size fraction), which were taken from previous studies. The optimal sampling protocol was 15–20, 0.01-m²×5-cm deep, 0.5-mm mesh samples per habitat.     

The Comparison of δ<Superscript>13</Superscript>C Values of a Deposit- and a Suspension-Feeder Bio-Indicates Benthic vs. Pelagic Couplings and Trophic Status in Contrasted Coastal Ecosystems

δ¹³C and δ¹⁵N values of two generalists primary consumers, a strict deposit-feeder polychaete (Arenicola marina), and a strict suspension-feeder bivalve (Crassostrea gigas), were investigated to typify the trophic functioning of two contrasted marine coastal ecosystems (eutrophic and mesotrophic, east and west Cotentin peninsula, respectively, English Channel, Normandy, France). On average, δ¹³C and δ¹⁵N values of lugworms mirrored those of sediment organic matter (SOM), whereas δ¹³C and δ¹⁵N of oysters mirrored those of suspended particulate organic matter (SPOM). δ¹³C values of the two species displayed significant differences on the west coast (mesotrophic) contrary to the east coast (eutrophic; significant interactions). δ¹⁵N values differed only between sites and not between species. Diet of A. marina relied exclusively on microphytobenthos (MPB) and detritus of macroalgae (ULV) on the mesotrophic coast, whereas diet of C. gigas relied mainly on SPOM. Conversely, on the eutrophic ecosystem (the east coast), both species displayed the same diet, which was a mixture of pelagic sources (SPOM), benthic sources (MPB and ULV) and to a lesser extent riverine particulate organic matter (rPOM). These results were explained by the intensity of benthic vs. pelagic couplings (i.e. benthic-pelagic and pelagic-benthic) which differed in the two ecosystems. Low trophic coupling occurred on the mesotrophic (west) coast, whereas benthic-pelagic (SOM resuspension) and pelagic-benthic (settling of SPOM such as phytoplankton blooms) couplings were typified on the eutrophic (east) coast. This higher particulate organic matter (POM) pelagic-benthic coupling on the east coast was probably enhanced by nutrient enrichment caused by eutrophication. Comparison of δ¹³C ratios of both the strict deposit-feeder (e.g. A. marina) and the strict suspension-feeder (e.g. C. gigas) was then proposed as a bio-indicator of the trophic status and of POM benthic vs. pelagic couplings of soft-bottom coastal ecosystems.     

Is the Collapse of Mud Shrimp (<Emphasis Type="Italic">Upogebia pugettensis</Emphasis>) Populations Along the Pacific Coast of North America Caused by Outbreaks of a Previously Unknown Bopyrid Isopod Parasite (<Emphasis Type="Italic">Orthione griffenis</Emphasis>)?

A dramatic increase in prevalence of the recently discovered bopyrid isopod parasite, Orthione griffenis, likely introduced in the 1980s from Asia to the Pacific coast of North America, coincided with the 2002 collapse of a population of its burrowing mud shrimp host, Upogebia pugettensis, in Willapa Bay, Washington that had been stable since monitoring began in 1988. An examination of whether O. griffenis infections were sufficient to cause this decline and other recently noted U. pugettensis population collapses in Pacific Coast estuaries was conducted. O. griffenis prevalence was the highest in large reproductive-sized female shrimp and caused an estimated average 68% loss of U. pugettensis reproduction in Yaquina Bay, Oregon over a 5-year period. O. griffenis prevalence fluctuated from year to year, but trends were similar in all estuaries sampled. Uninfected shrimp transplanted back into locations from which they had disappeared acquired the parasite, suggesting that O. griffenis is extremely effective at finding its host even in estuaries with very low host density. Since both U. pugettensis and O. griffenis have pelagic larval stages, their population dynamics are also influenced by coastal nearshore oceanography and estuarine recruitment success. Coastwide lack of estuarine recruitment appears to coincide with declines in density of a co-occurring thalassinid shrimp, Neotrypaea californiensis, but cannot alone explain U. pugettensis population collapses. Although patterns observed to date could be explained by the presence of either a native or introduced parasitic castrator, assumptions of a resilient co-evolved host–parasite relationship do not apply for introduced species, so continued efforts to follow the spatial extent and consequences of the O. griffenis–U. pugettensis host–parasite relationship are warranted.     

An insight into the Eocene tide-dominated estuarine system: implications for palaeoenvironmental and sequence stratigraphic interpretations

This article describes a complete sedimentary succession of an ancient macrotidal tide-dominated estuarine system based on the detailed outcrop study. The Eocene siliciclastic sedimentary facies of Ameki Group in the south-eastern Nigeria provides a record of the sedimentary response to an initial regression, followed by marine incursion (transgression) into the Niger Delta Basin. These sedimentary successions are analogues to the subsurface petrolific Niger Delta lithostratigraphic units. Seven facies associations (FA 1 to FA 7) are documented in the study area and the sediments are interpreted as fluvial channel, tidally influenced fluvial channel, tidal channel, tidal flats, supratidal, tidal sand bar and estuarine embayment (open estuarine) deposits. The occurrence of low diversity ichnofaunal assemblages and/or localised high-density monospecific ichnofossil assemblages indicates brackish-water condition typical of estuarine settings. The suites of assemblages include Scoyenia, Skolithos, Cruziana, mixed Skolithos-Cruziana, Glossifungites, Psilonichnus and Teredolites ichnofacies. A complete depositional sequence is encountered in the Eocene Ameki Group which consists of the lowstand, transgressive, highstand and falling stage systems tracts. This depositional succession was most probably controlled by relative sea level changes, sediment supply, accommodation and regional tectonics which affected the development of Niger Delta Basin.     

Effects of Tidal Flooding on Juvenile Willows

Tidal wetlands are affected by sea level rise. In the tidal freshwater stretches of estuaries in the temperate zone, willows (Salix spp.) form tidal freshwater forests above the mean high water level. Willows tolerance to prolonged periodic flooding in riverine systems is well documented, whereas effects of tidal flooding on willows are largely unknown. Flooding stress may play a major role in regeneration failure of willows in tidal forest stands along estuarine shores, and juvenile willows might be specifically affected by partial or total submergence. To assess the tolerance of juvenile willows to tidal flooding, we conducted a mesocosm experiment with cuttings from Salix alba and Salix viminalis, which are both characteristic species for tidal freshwater forests in Europe. Cuttings originating from either fresh or brackish tidal forest stands were grown under four tidal treatments with up to a tidal flooding of 60 cm. A general tolerance to a tidal flooding of 60 cm was observed in chlorophyll fluorescence, growth rates, and biomass production in both willow species. Overall, S. alba showed higher leaf and shoot growth, whereas S. viminalis produced more biomass. S. alba with brackish origin performed worst with increasing tidal flooding, suggesting a possible pre-weakening due to stressful site conditions in tidal wetlands at the estuarine brackish stretch. This study demonstrates that juvenile willows of S. alba and S. viminalis tolerate tidal flooding of up to 60 cm. It is concluded that tidal inundation acts as a stress by causing submergence and soil anaerobiosis, but may also act as a subsidy by reestablishing aerobic conditions and thus maintaining willows performance. Therefore, we suggest investigations on Salix tidal flooding tolerance and possible effects of willows on tidal wetland accretion under estuarine field conditions.     

Food Habits of Large Nektonic Fishes: Trophic Linkages in Delaware Bay and the Adjacent Ocean

Fish diets play a critical role in our understanding of aquatic trophic dynamics and are an important component in developing ecosystem-based approaches to fisheries management. Although large nektonic fishes exert top-down predator effects on the food web and typically support viable commercial and recreational fisheries, little is known about the diet of this guild. We evaluated the diets (6327 stomachs) of four nektonic predatory fishes (Pomatomus saltatrix [78–395 mm], Cynoscion regalis [91–520 mm], Morone americana [156–361 mm], and Morone saxatilis [82–785 mm]) in Delaware Bay and in the adjacent ocean. To assess ontogenetic, geographic, and interspecific variation in diets, observations from individual fish stomachs were clustered into species-size class groups, and dietary overlap was estimated using multivariate analyses. A shift in diet composition, as well as diversity, occurred along the estuarine gradient and into the adjacent ocean. Some prey were shared by most predators, including some crustaceans (dominated by Callinectes sapidus, mysids, and Palaemonetes spp.), fundulids (dominated by Fundulus heteroclitus), engraulids (dominated by Anchoa mitchilli), and clupeids (dominated by Brevoortia tyrannus). However, inter- and intra-specific variation in diet was observed as well. In particular, M. americana consumed fewer engraulids and clupeids, and many more and diverse types of invertebrates, while P. saltatrix consumed more clupeids and less invertebrates. The lack of overlap in diet between the four predators evaluated, and between size groups for each predator, supports previous evidence that these groups feed in trophic guilds defined by species and by size within a species. The highly variable diets for these predators suggest high resolution spatial data are necessary in order to quantify their most important prey and their role in coastal ecosystems.     

Fish Predation on Juvenile Penaeid Shrimp: Examining Relative Predator Impact and Size-Selective Predation

Predation is likely the primary source of mortality for juvenile penaeid shrimp and, therefore, a key factor driving their population dynamics. We sampled juvenile penaeids and their potential predators in a salt marsh from July to August 2012 to examine the impact of these predators and possible size-selective predation on the shrimp population. We quantified predator impact using the frequency of occurrence (FO) index and a relative predation index (RPI) that accounts for predator abundance and the number of shrimp consumed per individual predator. Size selectivity was assessed by comparing the size distribution of shrimp in the study area to the size distribution of shrimp removed from predator stomachs. Two penaeid species, white shrimp Litopenaeus setiferus and brown shrimp Farfantepenaeus aztecus, were collected, and most (86%) were juvenile white shrimp ≤?12 mm carapace length. Spotted seatrout Cynoscion nebulosus, which consumed relatively large shrimp, was the most important predator based on the FO index. Bay whiff Citharichthys spilopterus, which ate the smallest shrimp, was the most important predator based on the RPI. The size distribution of shrimp removed from predator stomachs differed from those collected in the study area; the smallest shrimp were disproportionally more abundant in predator stomachs. Using the RPI, we identified some potentially important predators (e.g., bay whiff) that may impact shrimp populations by consuming the smallest shrimp in estuarine nurseries. Our approach could be useful for examining predator impacts on other populations of juvenile penaeids and more generally for any prey consumed by fish predators.     

Oysters, crabs, and burrowing shrimp: Review of an environmental conflict over aquatic resources and pesticide use in Washington State’s (USA) coastal estuaries

Washington State’s coastal estuaries are productive shallow water environments that support commercial fisheries for Dungeness crabs (Cancer magister) and English sole (Parophrys vetulus) by providing 0+(settlement to age l) populations with critical refuge and foraging habitats until subadults migrate to the nearshore coast. Intertidalmudflats also constitute prime areas for commercial oyster (Crassostrea gigas) culture, an, important industry for the coastal communities of Willapa Bay and Grays Harbor that supply much of the nation's oysters. Conflicts over natural resources and estuarine utilization have arisen over the last 37 yr due to the use of carbaryl (an organo carbamate pesticide) by oyster growers on their grounds to control populations of burrowing thalassinidean shrimp (Neotrypaea californiensis and Upogebia pugettensis). Burrowing shrimp, which have an indirect negative effect on oyster survival and growth through bioturbation and sediment destabilization, are killed by carbaryl, as are 0+ and subadult Dungeness crabs, 0+English sole, and other non-target species prsent on the tideflats at the time of application. The pesticide is delivered at 9 kg ha^?1 directly to the mudflat as a wetable powder during low tides in July and August. Commercial crabbers and other groups who have economic, recreational, and environmental interests in the estuaries have generally opposed use of the chemical that oyster growers maintain is essential to sustain production levels. For years, government natural resource agencies that regulate the use of carbaryl lacked critical information needed to effectively manage the program. An Environmental Impact Statement (EIS) and Supplemental EIS have provided much of that data and helped shape management decisions with regard to establishing carbaryl concentration rates and total allowable spray area. Additional research is needed to develop more economically and environmentally sound policies for shrimp control based on burrowing shrimp-oyster interactions on an estuarine-wide scale. In this paper we review issues pertaining to oyster culture, the use of carbaryl to control burrowing shrimp populations, and effects on non-target species, drawing upon research from, published articles as well as unpublished data collected by the authors. We also discuss what is known of burrowing shrimp life history and ecology and emphasize the importance of integrating information on shrimp, such as timing of recruitment, variability in year class strength, and patterns of habitat use, into carbaryl control policies or alternative strategies that may be developed in the future. We recommend controlled experimentation be done to examine the ecological effects of delaying carbaryl application to some ghost shrimp beds until October after peak recruitment of 0+ ghost shrimp has occurred, allowing the number of hectares treated each year to vary based on fluctuations in pest population densities, and modifying the substrate by applying a dense layer of oyster shell to the mudflat (shell pavement) to reduce recruitment of ghost shrimp.     

Effects of Local Watershed Land Use on Water Quality in Mid-Atlantic Coastal Bays and Subestuaries of the Chesapeake Bay

Nutrient inputs have degraded estuaries worldwide. We investigated the sources and effects of nutrient inputs by comparing water quality at shallow (< 2m deep) nearshore (within 200 m) locations in a total of 49 Chesapeake subestuaries and Mid-Atlantic coastal bays with differing local watershed land use. During July–October, concentrations of total nitrogen (TN), dissolved ammonium, dissolved inorganic N (DIN), and chlorophyll a were positively correlated with the percentages of cropland and developed land in the local watersheds. TN, DIN, and nitrate were positively correlated with the ratio of watershed area to subestuary area. Total phosphorus (TP) and dissolved phosphate increased with cropland but were not affected by developed land. The relationships among N, P, chlorophyll a, and land use suggest N limitation of chlorophyll a production from July–October. We compared our measurements inside the subestuaries to measurements by the Chesapeake Bay Program in adjacent estuarine waters outside the subestuaries. TP and dissolved inorganic P concentrations inside the subestuaries correlated with concentrations outside the subestuaries. However, water quality inside the subestuaries generally differed from that in adjacent estuarine waters. The concentration of nitrate was lower inside the subestuaries, while the concentrations of other forms of N, TP, and chlorophyll a were higher. This suggests that shallow nearshore waters inside the subestuaries import nitrate while exporting other forms of N as well as TP and chlorophyll a. The importance of local land use and the distinct biogeochemistry of shallow waters should be considered in managing coastal systems.     

The Influence of Benthic Macrofauna on the Erodibility of Intertidal Sediments with Varying mud Content in Three New Zealand Estuaries

Fine sediment inputs can alter estuarine ecosystem structure and function. However, natural variations in the processes that regulate sediment transport make it difficult to predict their fate. In this study, sediments were sampled at different times (2011–2012) from 45 points across intertidal sandflat transects in three New Zealand estuaries (Whitford, Whangamata, and Kawhia) encompassing a wide range in mud (≤63 μm) content (0–56 %) and macrofaunal community structure. Using a core-based erosion measurement device (EROMES), we calculated three distinct measures of sediment erosion potential: erosion threshold (? _c ; N m^?2), erosion rate (ER; g m^?2 s^?1), and change in erosion rate with increasing bed shear stress (m _e ; g N^?1 s^?1). Collectively, these measures characterized surface (? _c and ER) and sub-surface (m _e ) erosion. Benthic macrofauna were grouped by functional traits (size and motility) and data pooled across estuaries to determine relationships between abiotic (mud content, mean grain size) and biotic (benthic macrofauna, microbial biomass) variables and erosion measures. Results indicated that small bioturbating macrofauna (predominantly freely motile species <5 mm in size) destabilized surface sediments, explaining 23 % of the variation in ? _c (p ≤ 0.01) and 59 % of the variation in ER (p ≤ 0.01). Alternatively, mud content and mean grain size cumulatively explained 61 % of the variation in m _e (p ≤ 0.01), where increasing mud and grain size stabilized sub-surface sediments. These results highlight that the importance of biotic and abiotic predictors vary with erosion stage and that functional group classifications are a useful way to determine the impact of benthic macrofauna on sediment erodibility across communities with different species composition.     

Application of Species Distribution Models to Identify Estuarine Hot Spots for Juvenile Nekton

Modeling the distribution and habitat capacities of key estuarine species can be used to identify hot spots, areas where species density is significantly higher than surrounding areas. This approach would be useful for establishing a baseline for evaluating future environmental scenarios across a landscape. We developed species distribution models for early juvenile life stages of brown shrimp (Farfantepenaeus aztecus), white shrimp (Litopenaeus setiferus), blue crab (Callinectes sapidus), and spotted seatrout (Cynoscion nebulosus) in order to delineate the current coastal hot spots that provide the highest quality habitat conditions for these estuarine-dependent species in Louisiana. Response curves were developed from existing long-term fisheries-independent monitoring data to identify habitat suitability for fragmented marsh landscapes. Response curves were then integrated with spatially explicit input data to generate species distribution models for the coastal region of Louisiana. Using spatial autocorrelation metrics, we detected clusters of suitable habitat across the Louisiana coast, but only 1% of the areas were identified as true hot spots with the highest habitat quality for nekton. The regions identified as hot spots were productive fringing marsh habitats that are considered the most vulnerable to natural and anthropogenic impacts. The species distribution models identify the coastal habitats which currently provide the greatest capacity for key estuarine species and will be used in the Louisiana coastal planning process to evaluate how species distributions may change under various environmental and restoration scenarios.     

Is Salinity Variability a Benthic Disturbance in Estuaries?

Freshwater inflow is a driver of the functioning of estuaries, and average salinity is usually measured to identify the effects of inflow in salinity-zone habitats. However, salinity variability could act as a disturbance by producing unstable habitats, leading to the question: is salinity variance an indicator of benthic disturbance, and therefore a driver of community stability? The macrofauna communities of five estuaries that lie in a climatic gradient on the Texas coastline were analyzed using a 26-year data set. Comparisons within and between estuaries with different inflow regimes were used as a natural experiment to simulate press disturbance events (i.e., climatic inflow) and pulse disturbance (i.e., floods) in maintaining community stability. Salinity average and variance was compared with benthic community diversity, evenness, and species richness. Salinity variance was more correlated to benthic diversity for each estuarine system (r?=??0.6610; p?=?0.0015) than average salinity (r?=?0.3818; p?=?0.0967). As salinity variance decreased (i.e., stability increased), diversity levels of benthic communities increased, and areas with mgore freshwater inflow displayed lower levels of benthic diversity. These findings advance a component of the general theory of diversity maintenance that persistent stressors, such as salinity variability, can influence diversity.     

Seasonal Factors Influencing Copepod Abundance in the Maryland Coastal Bays

Maryland Coastal Bays differ in hydrography from river-dominated estuaries because of limited freshwater inflow from tributary creeks and more marine influence. Consequently, the copepod community structure may be different from that of the coastal ocean and river-dominated estuaries in the mid-Atlantic region. A 2-year study was conducted to describe copepod species composition and seasonal patterns in abundance and factors influencing the community structure. Seven copepod genera, Acartia, Centropages, Pseudodiaptomus, Parvocalanus, Eurytemora, Oithona, and Temora, in addition to harpacticoids were found. The copepod community was dominated by Acartia spp. (64%), followed by Centropages spp. (30%), unlike in river-dominated estuaries in the region where the copepod community is usually dominated by Acartia spp. followed by Eurytemora affinis. Acartia tonsa was the most abundant in summer and fall whereas Centropages spp., Temora sp., Oithona similis, E. affinis, and harpacticoids were most abundant in winter and early spring. Parvocalanus crassirostris and Pseudodiaptomus pelagicus were present in fall and winter but at relatively low densities. The highest mean density of copepods occurred in winter 2012 (36,437 m^?3) and the lowest in spring 2013 (347 m^?3). Low densities occurred through early summer (614 m^?3) coinciding with peak spawning by bay anchovy (Anchoa mitchilli). Bottom-up control via low phytoplankton biomass coupled with top-down control by ctenophores (Mnemiopsis sp.), mysids (Neomysis americana), and bay anchovy was probably responsible for the low copepod densities in spring and early summer. Temperature and salinity were also important factors that influenced the seasonal patterns of copepod species occurrence. The observed seasonal differences in the abundance of copepods have important implications for planktivorous fishes as they may experience lower growth rates and survival due to food limitation in spring/early summer when copepod densities are relatively low than in late summer/fall when copepod abundance is higher.     

Using Stable Isotopes to Assess the Contribution of Terrestrial and Riverine Organic Matter to Diets of Nearshore Marine Consumers in a Glacially Influenced Estuary

Terrestrial and marine ecosystems in Southeast Alaska are linked by the flow of freshwater from precipitation and glacial runoff, which transports nutrients and organic matter (OM) downstream to estuaries. We examined the contribution of terrestrial-riverine and marine OM to diets of fishes (N = 257, four species) and invertebrates (N = 90, six species) collected from glacially influenced estuaries in Southeast Alaska using multiple stable isotopes (δ¹³C, δ¹⁵N, and δ³⁴S). Multivariate analysis of similarity (ANOSIM) was used to quantify variation in stable isotope composition of consumers across 6 months and three sites with watersheds that differed in their glacier and forest composition. Fishes showed weak differences (ANOSIM R = 0.141) in stable isotope composition among sampling months, moderate differences (ANOSIM R = 0.375) among sites, and strong differences (ANOSIM R = 0.583) among species. Invertebrates showed moderate differences (ANOSIM R = 0.352) in stable isotope composition among sampling months and strong differences among sites (ANOSIM R = 0.710) and species (ANOSIM R = 0.858). We found the greatest differences in stable isotope composition between the two estuary sites with watersheds containing the highest and lowest glacial coverage, indicating that the contribution of allochthonous OM to consumer diets varies across watershed types. Invertebrates collected from the site with the lowest glacial coverage in the watershed were more depleted in δ¹³C and δ³⁴S, indicating higher use of terrestrial-riverine OM, than those at sites with higher watershed glacial coverage. High variation in stable isotope composition among species, months, and sites underscores the complexity of estuary food web responses to future glacier loss.     

Tide-Induced Variations in the Fatty Acid Composition of Estuarine Particulate Organic Matter

The particulate organic matter (POM) in hydrodynamically variable habitats such as the lower reaches of estuaries can change in its content and quality on very short time scales (example, hourly), and these changes can potentially influence higher-level consumers in river-estuary-marine systems. Estuarine water samples were collected hourly for 12 h downstream in a small river to evaluate the fatty acid composition of POM over a tidal cycle. Fatty acid constituents of POM collected during the flood tide were dominated by the saturated, higher plant and bacterial fatty acids, whereas unsaturated, polyunsaturated, essential, and diatom-associated fatty acids dominated the POM collected during the ebb tide. Elevated algal biomass (as indicated by high chlorophyll a concentrations), diatom, and freshness indices in the POM indicated enhanced fresh autochthonous-origin materials that dominated the mixed organic pool during the ebb tide compared to more degraded detritus during the flood tide. Tidal retention of organic matter and algal primary production were the most influential factors that differentiated the fatty acid composition of estuarine POM over the short time scale. The results of this study have important implications on the quality of POM at the time of sampling, especially in estuaries where mixed organic pools have multiple inputs and are strongly influenced by tidal cycles.     

<Emphasis Type="Italic">Rhizopalmoxylon nypoides</Emphasis> – a new palm root from the Deccan Intertrappean beds of Sagar,Madhya Pradesh,India

A new species of fossil palm rhizome having root-mat under the organ genus Rhizopalamoxylon (Rhizopalmoxylon nypoides sp. nov.) is reported. The specimen shows the closest resemblance with the modern monotypic genus Nypa Wurmb of the Arecaceae. The specimen was collected from the late Maastrichtian–early Danian sediments of Deccan Intertrappean beds, Mothi, Sagar district, Madhya Pradesh, India. Nypa is a mangrove palm naturally found in estuaries and swamps of the tropical region and represents one of the oldest records of the genus from the Deccan Intertrappean beds of central India. The abundance of palms, including Nypa and previously recorded coastal and mangrove elements such as Acrostichum, Barringtonia, Cocos, Sonneratia and marine algae (Distichoplax and Peyssonellia) from the Deccan Intertrappean beds indicate marine influence and existence of tropical rainforest ecosystem in the vicinity of fossil locality in contrast to the deciduous forests occurring there at present.     

Salinity Tolerance and Competition Drive Distributions of Native and Invasive Submerged Aquatic Vegetation in the Upper San Francisco Estuary

Both abiotic and biotic factors govern distributions of estuarine vegetation, and experiments can reveal effects of these drivers under current and future conditions. In upper San Francisco Estuary (SFE), increased salinity could result from sea level rise, levee failure, or water management. We used mesocosms to test salinity effects on, as well as competition between, the native Stuckenia pectinata (sago pondweed) and invasive Egeria densa (Brazilian waterweed), species with overlapping distributions at the freshwater transition in SFE. Grown alone at a salinity of 5, E. densa decreased fivefold in biomass relative to the freshwater treatment and decomposed within 3 weeks at higher salinities. In contrast, S. pectinata biomass accumulated greatly (~4× initial) at salinities of 0 and 5, doubled at 10, and was unchanged at 15. When grown together in freshwater, S. pectinata produced 75 % less biomass than in monoculture and significantly more nodal roots (suggesting increased nutrient foraging). At a salinity of 5, a decline in E. densa performance coincided with a doubling of S. pectinata shoot density. Additional experiments on E. densa showed elevated temperature (26 and 30 °C) suppressed growth especially at higher salinities (≥5). We conclude that salinity strongly influences distributions of both species and that competition from E. densa may impose limits on S. pectinata abundance in the fresher reaches of SFE. With a salinity increase of 5, S. pectinata is likely to maintain its current distribution while spreading up-estuary at the expense of E. densa, especially if increased temperature also reduces E. densa biomass.     

Red Waters of <Emphasis Type="Italic">Myrionecta rubra</Emphasis> are Biogeochemical Hotspots for the Columbia River Estuary with Impacts on Primary/Secondary Productions and Nutrient Cycles

The localized impact of blooms of the mixotrophic ciliate Myrionecta rubra in the Columbia River estuary during 2007–2010 was evaluated with biogeochemical, light microscopy, physiological, and molecular data. M. rubra affected surrounding estuarine nutrient cycles, as indicated by high and low concentrations of organic nutrients and inorganic nitrogen, respectively, associated with red waters. M. rubra blooms also altered the energy transfer pattern in patches of the estuarine water that contain the ciliate by creating areas characterized by high primary production and elevated levels of fresh autochthonous particulate organic matter, therefore shifting the trophic status in emergent red water areas of the estuary from net heterotrophy towards autotrophy. The pelagic estuarine bacterial community structure was unaffected by M. rubra abundance, but red waters of the ciliate do offer a possible link between autotrophic and heterotrophic processes since they were associated with elevated dissolved organic matter and showed a tendency for enhanced microbial secondary production. Taken together, these findings suggest that M. rubra red waters are biogeochemical hotspots of the Columbia River estuary.     

Growth and Movements of Mummichogs (<Emphasis Type="Italic">Fundulus heteroclitus</Emphasis>) Along Armored and Vegetated Estuarine Shorelines

Alteration of estuarine shorelines associated with increased urbanization can significantly impact biota and food webs. This study determined the impact of shoreline alteration on growth and movement of the estuarine fish Fundulus heteroclitus in a tributary of the Delaware Coastal Bays. Fundulus heteroclitus is abundant along the east coast of the USA, and is an important trophic link between marsh and subtidal estuary. The restricted home range of F. heteroclitus allowed discrete sampling, and fish growth comparisons, along 35–65-m long stretches of fringing Spartina alterniflora and Phragmites australis marsh, riprap, and bulkhead. Fundulus heteroclitus were tagged with decimal Coded Wire Tags. Of 725 tagged F. heteroclitus, 89 were recaptured 30–63 days later. Mean growth rate (0.06–0.15 mm day^?1 across all shoreline types) was greatest at riprap, lowest at Spartina and Phragmites, and intermediate at bulkhead, where growth was not significantly different from any other shoreline. This suggests that discernible environments exist along different shoreline types, even at the scale of tens of meters. No difference in movement distance was detected at different shoreline types; most individuals displayed a high degree of site fidelity. Forty-seven percent were recaptured within 5 m of their tagging location, although alongshore movements up to 475 m were recorded. Estimates of relative F. heteroclitus productivity, using relative density data from a concurrent study, were highest along Spartina and Phragmites, intermediate at riprap, and lowest at bulkhead. Therefore, despite greater growth rates along riprap than at vegetated shores, armoring reduces abundance sufficiently to negatively impact localized productivity of F. heteroclitus.