Spatial and Temporal Variability of Sediment Organic Matter Recycling in Two Temperate Eutrophicated Estuaries

This paper deals with the spatial and seasonal recycling of organic matter in sediments of two temperate small estuaries (Elorn and Aulne, France). The spatio-temporal distribution of oxygen, nutrient and metal concentrations as well as the organic carbon and nitrogen contents in surficial sediments were determined and diffusive oxygen fluxes were calculated. In order to assess the source of organic carbon (OC) in the two estuaries, the isotopic composition of carbon (δ ¹³C) was also measured. The temporal variation of organic matter recycling was studied during four seasons in order to understand the driving forces of sediment mineralization and storage in these temperate estuaries. Low spatial variability of vertical profiles of oxygen, nutrient, and metal concentrations and diffusive oxygen fluxes were monitored at the station scale (within meters of the exact location) and cross-section scale. We observed diffusive oxygen fluxes around 15 mmol m^?2 day^?1 in the Elorn estuary and 10 mmol m^?2 day^?1 in the Aulne estuary. The outer (marine) stations of the two estuaries displayed similar diffusive O₂ fluxes. Suboxic and anoxic mineralization was large in the sediments from the two estuaries as shown by the rapid removal of very high bottom water concentrations of NO _x ^? (>200 μM) and the large NH₄ ⁺ increase at depth at all stations. OC contents and C/N ratios were high in upstream sediments (11–15 % d.w. and 4–6, respectively) and decreased downstream to values around 2 % d.w. and C/N ≤ 10. δ ¹³C values show that the organic matter has different origins in the two watersheds as exemplified by lower δ ¹³C values in the Aulne watershed. A high increase of δ ¹³C and C/N values was visible in the two estuaries from upstream to downstream indicating a progressive mixing of terrestrial with marine organic matter. The Elorn estuary is influenced by human activities in its watershed (urban area, animal farming) which suggest the input of labile organic matter, whereas the Aulne estuary displays larger river primary production which can be either mineralized in the water column or transferred to the lower estuary, thus leaving a lower mineralization in Aulne than Elorn estuary. This study highlights that (1) meter scale heterogeneity of benthic biogeochemical properties can be low in small and linear macrotidal estuaries, (2) two estuaries that are geographically close can show different pattern of organic matter origin and recycling related to human activities on watersheds, (3) small estuaries can have an important role in recycling and retention of organic matter.     

Spatial Distribution of Nitrous Oxide (N<Subscript>2</Subscript>O) in the Reloncaví Estuary–Sound and Adjacent Sea (41°–43° S), Chilean Patagonia

Fjords and estuaries exchange large amounts of solutes, gases, and particulates between fluvial and marine systems. These exchanges and their relative distributions of compounds/particles are partially controlled by stratification and water circulation. The spatial and vertical distributions of N₂O, an important greenhouse gas, along with other oceanographic variables, are analyzed from the Reloncaví estuary (RE) (~41° 30′ S) to the gulf of Corcovado in the interior sea of Chiloé (43° 45′ S) during the austral winter. Freshwater runoff into the estuary regulated salinity and stratification of the water column, clearly demarking the surface (<5 m depth) and subsurface layer (>5 m depth) and also separating estuarine and marine influenced areas. N₂O levels varied between 8.3 and 21 nM (corresponding to 80 and 170 % saturation, respectively), being significantly lower (11.8 ± 1.70) at the surface than in subsurface waters in the Reloncaví estuary (14.5 ± 1.73). Low salinity and NO₃ ^?, NO₂ ^?, and PO₄ ^3? levels, as well as high Si(OH)₄ values were associated with low surface N₂O levels. Remarkably, an accumulation of N₂O was observed in the subsurface waters of the Reloncaví sound, associated with a relatively high consumption of O₂. The sound is exposed to increasing anthropogenic impacts from aquaculture and urban discharge, occurring simultaneously with an internal recirculation, which leads to potential signals of early eutrophication. In contrast, within the interior sea of Chiloé (ISC), most of water column was quasi homohaline and occupied by modified subantarctic water (MSAAW), which was relatively rich in N₂O (12.6 ± 2.36 nM) and NO₃ ^? (18.3 ± 1.63 μM). The relationship between salinity, nutrients, and N₂O revealed that water from the open ocean, entering into ISC (the Gulf of Corcovado) through the Guafo mouth, was the main source of N₂O (up to 21 nM), as it gradually mixed with estuarine water. In addition, significant relationships between N₂O excess vs. AOU and N₂O excess vs. NO₃ ^? suggest that part of N₂O is also produced by nitrification. Our results show that the estuarine and marine waters can act as light source or sink of N₂O to the atmosphere (air–sea N₂O fluxes ranged from ?1.57 to 5.75 μmol m^?2 day^?1), respectively; influxes seem to be associated to brackish water depleted in N₂O that also caused a strong stratification, creating a barrier to gas exchange.     

Seasonal and Inter-annual Patterns in Primary Production,Respiration, and Net Ecosystem Metabolism in Three Estuaries in the Northeast Gulf of Mexico

Measurements of primary production and respiration provide fundamental information about the trophic status of aquatic ecosystems, yet such measurements are logistically difficult and expensive to sustain as part of long-term monitoring programs. However, ecosystem metabolism parameters can be inferred from high frequency water quality data collections using autonomous logging instruments. For this study, we analyzed such time series datasets from three Gulf of Mexico estuaries: Grand Bay, MS; Weeks Bay, AL; and Apalachicola Bay, FL. Data were acquired from NOAA's National Estuarine Research Reserve System Wide Monitoring Program and used to calculate gross primary production (GPP), ecosystem respiration (ER), and net ecosystem metabolism (NEM) using Odum's open water method. The three systems represent a diversity of estuaries typical of the Gulf of Mexico region, varying by as much as two orders of magnitude in key physical characteristics, such as estuarine area, watershed area, freshwater flow, and nutrient loading. In all three systems, GPP and ER displayed strong seasonality, peaking in summer and being lowest during winter. Peak rates of GPP and ER exceeded 200 mmol O₂?m^?2 day^?1 in all three estuaries. To our knowledge, this is the first study examining long-term trends in rates of GPP, ER, and NEM in estuaries. Variability in metabolism tended to be small among sites within each estuary. Nitrogen loading was highest in Weeks Bay, almost two times greater than that in Apalachicola Bay and 35 times greater than to Grand Bay. These differences in nitrogen loading were reflected in average annual GPP rates, which ranged from 825 g C m^?2 year^?1 in Weeks Bay to 401 g C m^?2 year^?1 for Apalachicola Bay and 377 g C m^?2 year^?1 in Grand Bay. Despite the strong inter-annual patterns in freshwater flow and salinity, variability in metabolic rates was low, perhaps reflecting shifts in the relative importance of benthic and phytoplankton productivity, during different flow regimes. The advantage of the open water method is that it uses readily available and cost-effective sonde monitoring technology to estimate these fundamental estuarine processes, thus providing a potential means for examining long-term trends in net carbon balance. It also provides a historical benchmark for comparison to ongoing and future monitoring focused on documenting the effect of human activities on the coastal zone.     

Flood hazard and damage assessment in the Ebro Delta (NW Mediterranean) to relative sea level rise

The impact of relative sea-level rise (RSLR), damage to and possible responses in the Ebro Delta (NW Mediterranean) has been analyzed. Impact was determined by delineating delta areas prone to flooding under different RSLR scenarios. The surface areas of the different habitats were then quantified for flooding impact and affected ecosystems were assessed. The obtained results enabled us to characterize the Ebro Delta as a coastal environment that is highly sensitive to changes in sea level, with affected flooded areas likely to range between about 45 and 60 % for different RSLR scenarios, from which about 26 % would be inundated by subsidence only. In absolute terms, the habitat most likely to be affected by flooding was cropland. In relative terms, the most affected habitats were those typical of the lowest areas: saltwater wetlands, riparian buffer and areas of saline vegetation. Under present deltaic evolution with no sediment supply, adaptation is considered a plausible option for managing the Ebro delta under a RSLR scenario. This implies permitting surface area losses or land use changes in the lower parts of the delta, where natural values will be reinforced, and concentrating agriculture in the higher parts of the deltaic plain.     

Continuous Monitoring Reveals Drivers of Dissolved Oxygen Variability in a Small California Estuary

Estuarine ecosystem diversity and function can be degraded by low oxygen concentrations. Understanding the spatial and temporal patterns of dissolved oxygen (DO) variation and the factors that predict decreases in DO is thus essential to inform estuarine management. We investigated DO variability and its drivers in Elkhorn Slough, a shallow, well-mixed estuary affected by high nutrient loading and with serious eutrophication problems. Long-term (2001–2012), high-resolution (15 min) time series of DO, water level, winds, and solar radiation from two fully tidal sites in the estuary showed that hypoxia events close to the bottom are common in the summer at the more upstream estuarine station. These events can occur in any lunar phase (spring to neap), at any time of the day, and both on sunny or cloudy days. They are, however, short-lived (lasting in average 40 min) and mainly driven by momentary low turbulent diffusion around slack tides (both at high and low water). Tidal advective transport explains up to 52.1% of the daily DO variability, and the water volume (or DO reservoir) contained in the estuary was not sufficient to avoid hypoxia in the estuary. Solar radiation was responsible for a positively correlated DO daily cycle but caused a decreased in the averaged DO in the summer at the inner station. Wind-driven upwelling reduced the average DO at the more oceanic station during spring. The approach we employed, using robust techniques to remove suspect data due to sensor drift combined with an array of statistical techniques, including spectral, harmonic, and coherence spectrum analysis, can serve as a model for analyses of long-term water quality datasets in other systems. Investigations such as ours can inform coastal management by identifying key drivers of hypoxia in estuaries.     

Formation and seasonal evolution of Atlantic menhaden juvenile nurseries in coastal estuaries

A hypothesis on the formation and seasonal evolution of Atlantic menhaden (Brevoortia tyrannus) juvenile nurseries in coastal estuaries is described. A series of cruises were undertaken to capture postmetamorphic juvenile menhaden and to characterize several biological and physical parameters along estuarine gradients. The two study systems, the Neuse and Pamlico rivers in North Carolina, contain important menhaden nursery grounds. Juvenile menhaden abundance was found to be associated with gradients of phytoplankton biomass as evidenced by chlorophylla levels in the upper water column. Fish abundances were only secondarily associated with salinity gradients as salinity was a factor that moderated primary production in the estuary. The persistence of spatial and temporal trends in the distribution of phytoplankton in the Neuse and Pamlico estuaries was reviewed. The review suggested that postmetamorphic juvenile menhaden modify their distribution patterns to match those created by phytoplankton biomass, which in turn makes them most abundant in the phytoplankton maxima of estuaries. Because the location of these maxima varies with the mixing and nutrient dynamics of different estuaries, so will the location of the nursery.     

Extreme Eutrophication in Shallow Estuaries and Lagoons of California Is Driven by a Unique Combination of Local Watershed Modifications That Trump Variability Associated with Wet and Dry Seasons

Rapidly growing human populations have caused heavy modifications to the watersheds of many Mediterranean climate estuaries, subjecting them to excessive nutrient enrichment and harmful macroalgal blooms. Despite these impacts, comprehensive studies in these systems are rare and comparisons between systems are lacking. We surveyed five southern California estuaries that ranged in size from 93 to 1,000 ha and incorporated differing land usages and watershed sizes. We sampled environmental variables (sediment redox potential, organic content, total nitrogen and total phosphorus, water column nitrate, ammonium, and salinity) and macroalgal cover and biomass quarterly at three locations within each estuary over 15 months to compare spatial and wet vs. dry season patterns. Maximum mean water column nitrate concentration across all estuaries ranged from 47 to 1,700 μM, showing that all estuaries were highly enriched with nitrogen, at least at some times. Mean macroalgal biomass ranged from 0 to 1,500 g wet wt m^?2. However, neither nutrient concentrations nor algal biomass showed consistent seasonal patterns as maximum values occurred in different seasons in different estuaries. Three-dimensional principal components analysis followed by regression analyses confirmed that macroalgal abundance was not directly related to water or sediment N concentrations. Rather each of these southern California estuaries showed individual patterns in all measured variables, which were most likely induced by a suite of physical modifications unique to each system and its watershed.     

Water quality analysis of a freshwater diversion at Caernarvon, Louisiana

Since 1991, Mississippi River water has been diverted at Caernarvon, Louisiana, into Breton Sound estuary. Breton Sound estuary encompasses 1100 km² of fresh and brackish, rapidly subsiding wetlands. Nitrite + nitrate, total Kjeldahl nitrogen, ammonium, total phosphorus, total suspended sediments, and salinity concentrations were monitored at seven locations in Breton Sound from 1988 to 1994. Statistical analysis of the data indicated decreased total Kjeldahl nitrogen with associated decrease in total nitrogen, and decreased salinity concentrations in the estuary due to the diversion. Spring and summer water quality transects indicated rapid reduction of nitrite + nitrate and total suspended sediment concentration as diverted Mississippi River water entered the estuary, suggesting near complete assimilation of these constituents by the ecosystem. Loading rates of nitrite + nitrate (5.6–13.4 g m⁻² yr⁻¹), total nitrogen (8.9–23.4 g m⁻² yr⁻¹), and total phosphorus (0.9–2.0 g m⁻² yr⁻¹) were calculated along with removal efficiencies for these constituents (nitrite + nitrate 88–97%; total nitrogen 32–57%; total phosphorus 0–46%). The low impact of the diversion on water quality in the Breton Sound estuary, along with assimilation of TSS over a very short distance, suggests that more water may be introduced into the estuary without detrimental affects. This would be necessary if freshwater diversions are to be used to distribute nitrients and sediments into the lower reaches of the estuary, in an effort to compensate for relative sea-level rise, and reverse the current trend of rapid loss of wetlands in coastal Louisiana.     

Importance of Biogeomorphic and Spatial Properties in Assessing a Tidal Salt Marsh Vulnerability to Sea-level Rise

We evaluated the biogeomorphic processes of a large (309 ha) tidal salt marsh and examined factors that influence its ability to keep pace with relative sea-level rise (SLR). Detailed elevation data from 1995 and 2008 were compared with digital elevation models (DEMs) to assess marsh surface elevation change during this time. Overall, 37 % (113 ha) of the marsh increased in elevation at a rate that exceeded SLR, whereas 63 % (196 ha) of the area did not keep pace with SLR. Of the total area, 55 % (169 ha) subsided during the study period, but subsidence varied spatially across the marsh surface. To determine which biogeomorphic and spatial factors contributed to measured elevation change, we collected soil cores and determined percent and origin of organic matter (OM), particle size, bulk density (BD), and distance to nearest bay edge, levee, and channel. We then used Akaike Information Criterion (AICc) model selection to assess those variables most important to determine measured elevation change. Soil stable isotope compositions were evaluated to assess the source of the OM. The samples had limited percent OM by weight (<5.5 %), with mean bulk densities of 0.58 g cm^-3, indicating that the soils had high mineral content with a relatively low proportion of pore space. The most parsimonious model with the highest AICc weight (0.53) included distance from bay's edge (i.e., lower intertidal) and distance from levee (i.e., upper intertidal). Close proximity to sediment source was the greatest factor in determining whether an area increased in elevation, whereas areas near landward levees experienced subsidence. Our study indicated that the ability of a marsh to keep pace with SLR varied across the surface, and assessing changes in elevation over time provides an alternative method to long-term accretion monitoring. SLR models that do not consider spatial variability of biogeomorphic and accretion processes may not correctly forecast marsh drowning rates, which may be especially true in modified and urbanized estuaries. In light of SLR, improving our understanding of elevation change in these dynamic marsh systems will play a crucial role in forecasting potential impacts to their sustainability and the survival of these ecosystems.     

Comparison of Estuarine Salinity Gradients and Associated Nekton Community Change in the Lower St. Johns River Estuary

Salinity is an important determinant of estuarine faunal composition; previous studies, however, have indicated conflicting accounts of continuous vs. relatively rapid change in community structure at certain salinities from geographically distinct estuaries. This study uses a large fisheries monitoring database (n?>?5,000 samples) to explore evidence for estuarine salinity zonation by nekton in the lower St. Johns River estuary (LSJR). There was little evidence to support the presence of estuarine salinity zones except at the extremes of the salinity gradient (i.e., 0.1?C1.0 and 34?C39). The LSJR estuarine nekton community exhibits progressively slow ecological change throughout most of the salinity gradient with rapid change at the interfaces with fresh and marine waters??an ecoline bounded by ecotones. This study affirms the rapid change that occurs at the extremes of the salinity spectrum in certain estuaries and is relevant to efforts to manage surface water resources and estuarine ecosystems. Given the disparity in the results of the studies examining biological salinity zones in estuaries, it would be wise to have, at minimum, a regional understanding of how communities are structured along the gradient from freshwater to marine.     

Physical, biological, and management responses to variable freshwater flow into the San Francisco Estuary

Freshwater flow is the principal cause of physical variability in estuaries and a focus of conflict in estuaries where a substantial fraction of the freshwater is diverted. Variation in freshwater flow can have many effects: inundation of flood plains, increase loading and advective transport of materials and organisms, dilution or mobilization of contaminants, compression of the estuarine salinity field and density gradient, increase in stratification, and decrease in residence time for water while increasing it for some particles and biota. In the San Francisco Estuary, freshwater flow is highly variable, and has been altered by shifts in seasonal patterns of river flow and increases in diversions from tidal and nontidal regions, entraining fish of several species of concern. Abundance or survival of several estuarine-dependent species also increases with freshwater outflow. These relationships to flow may be due to several potential mechanisms, each with its own locus and period of effectiveness, but no mechanism has been conclusively shown to underlie the flow relationship of any species. Several flow-based management actions were established in the mid-1990s, including a salinity standard based on these flow effects, as well as reductions in diversion pumping during critical periods for listed species of fish. The effectiveness of these actions has not been established. To make the salinity standard more effective and more applicable to future estuarine conditions will require investigation to determine the underlying mechanisms. Effects of entrainment at diversion facilities are more straightforward conceptually but difficult to quatify, and resolving these may require experimental manipulations of diversion flow.     

CO2 Input Dynamics and Air–Sea Exchange in a Large New England Estuary

Repeated surveys of the Kennebec estuary, a macrotidal river estuary in Maine, USA, between 2004 and 2008 found spatial and temporal variability both in sources of carbon dioxide (CO₂) to the estuary and the air–sea flux of estuary CO₂. On an annual basis, the surveyed area of the Kennebec estuary had an area-weighted average partial pressure of CO₂ (pCO₂) of 559 μatm. The area-weighted average CO₂ flux to the atmosphere was 3.54 mol C m^?2 year^?1. Overall, the Kennebec estuary was an annual source of 7.2?×?10⁷ mol CO₂ to the atmosphere. Distinct seasonality in estuarine pCO₂ was observed, with shifts in the seasonal pattern evident between lower and higher salinities. Fluxes of CO₂ from the estuary were elevated following two summertime storms, and inputs of riverine CO₂ outweighed internal estuarine CO₂ inputs in nearly all months. River and estuarine inputs of CO₂ represented 68 and 32 % of the total CO₂ contributions to the estuary, respectively. This study examines the variability of CO₂ in a large New England estuary, and highlights the comparatively high contribution of CO₂ from riverine sources.     

Effects of Wave–Current Interaction on Salt Intrusion During a Typhoon Event in a Highly Stratified Estuary

Wave–current interaction (WCI) is important in modulating hydrodynamics and water mixing in estuaries, and thereby the transport of water-borne materials. However, the effects of WCI on salt transport and salt intrusion in estuaries during storm events have been rarely examined. In the present study, we use a coupled atmosphere–ocean–wave–sediment transport (COAWST) modeling system to investigate the effects of WCI on salt intrusion in the highly stratified Modaomen Estuary during Typhoon Hagupit (2008). The model is validated by the measured wave, water elevation, and surface salinity data, and several diagnostic model experiments are conducted. WCI increases the storm surge by 0.8 m at the peak surge (25% of the total surge height). The wave-breaking-induced momentum flux and the Stokes drift increase the magnitude of the landward flow by 0.3 m s^?1 (30% of the total landward flow). In addition, the waves increase water mixing by 2–4 times compared with that without waves. Hence, WCI significantly increases the landward advective salt transport and decreases the steady shear transport. The net effect of the WCI is a significant increase of salt import and salt intrusion during the typhoon event. However, in the aftermath of the storm, the imported salt water is rapidly flushed out by the increased river discharge, and the estuary regains its stratification within one day.     

An Estuarine Habitat Classification for a Complex Fjordal Island Archipelago

Spatial patterns of estuarine biota suggest that some nearshore ecosystems are functionally linked to interacting processes of the ocean, watershed, and coastal geomorphology. The classification of estuaries can therefore provide important information for distribution studies of nearshore biodiversity. However, many existing classifications are too coarse-scaled to resolve subtle environmental differences that may significantly alter biological structure. We developed an objective three-tier spatially nested classification, then conducted a case study in the Alexander Archipelago of Southeast Alaska, USA, and tested the statistical association of observed biota to changes in estuarine classes. At level 1, the coarsest scale (100–1000’s km²), we used patterns of sea surface temperature and salinity to identify marine domains. At level 2, within each marine domain, fjordal land masses were subdivided into coastal watersheds (10–100’s km²), and 17 estuary classes were identified based on similar marine exposure, river discharge, glacier volume, and snow accumulation. At level 3, the finest scale (1–10’s km²), homogeneous nearshore (depths <10 m) segments were characterized by one of 35 benthic habitat types of the ShoreZone mapping system. The aerial ShoreZone surveys and imagery also provided spatially comprehensive inventories of 19 benthic taxa. These were combined with six anadromous species for a relative measure of estuarine biodiversity. Results suggest that (1) estuaries with similar environmental attributes have similar biological communities, and (2) relative biodiversity increases predictably with increasing habitat complexity, marine exposure, and decreasing freshwater. These results have important implications for the management of ecologically sensitive estuaries.     

Sedimentation in a river dominated estuary

The Mgeni Estuary on the wave dominated east coast of South Africa occupies a narrow, bedrock confined, alluvial valley and is partially blocked at the coast by an elongate sandy barrier. Fluvial sediment extends to the barrier and marine deposition is restricted to a small flood tidal delta. Sequential aerial photography, sediment sampling and topographical surveys reveal a cyclical pattern of sedimentation that is mediated by severe fluvial floods which exceed normal energy thresholds. During severe floods (up to 10x 10³ m³ s^?1), lateral channel confinement promotes vertical erosion ofbed material. Eroded material is deposited as an ephemeral delta in the sea. After floods the river gradient is restored within a few months through rapid fluvial deposition and formation of a shallow, braided channel. Over an extended period (approximately 70 years) the estuary banks and bars are stabilised by vegetation and mud deposition. Subsequent downcutting in marginal areas transforms the channel to an anastomosing pattern which represents a stable morphology which adjusts to the normal range of hydrodynamic conditions. This cyclical pattern of deposition produces multiple fill sequences in such estuaries under conditions of stable sea level. The barrier and adjacent coastline prograde temporarily after major floods as the eroded barrier is reformed by wave action, but excess sediment is ultimately eroded as waves adjust the barrier to an equilibrium plan form morphology. Deltaic progradation is prevented by a steep nearshore slope, and rapid sediment dispersal by wave action and shelf currents. During transgression, estuarine sedimentation patterns are controlled by the balance between sedimentation rates and receiving basin volume. If fluvial sedimentation keeps pace with the volume increase of a basin an estuary may remain shallow and river dominated throughout its evolution and excess fluvial sediments pass through the estuary into the sea. Only if the rate of volume increase of the drowned river valley exceeds the volume of sediment supply are deep water environments formed. Under such conditions an estuary becomes a sediment sink and infills by deltaic progradation and lateral accretion as predicted by evolutionary models for microtidal estuaries. Bedrock valley geometry may exert an important control on this rate of volume increase independently of variations in the rate of relative sea level change. If estuarine morphology is viewed as a function of the balance of wave, tidal and fluvial processes, the Mgeni Estuary may be defined as a river dominated estuary in which deltaic progradation at the coast is limited by high wave energy. It is broadly representative of other river dominated estuaries along the Natal coast and a conceptual regional depositional model is proposed. Refinement of a globally applicable model will require further comparative studies of river dominated estuaries in this and other settings, but it is proposed that river dominated estuaries represent a distinct type of estuarine morphology.     

Spatial and temporal variability and drivers of net ecosystem metabolism in western Gulf of Mexico estuaries

Net ecosystem metabolism (NEM) is becoming a commonly used ecological indicator of estuarine ecosystem metabolic rates. Estuarine ecosystem processes are spatially and temporally variable, but the corresponding variability in NEM has not been properly assessed. Spatial and temporal variability in NEM was assessed in four western Gulf of Mexico shallow water estuaries. NEM was calculated from high-frequency dissolved oxygen measurements. Interbay, intrabay, and water column spatial scales were assessed for NEM, gross primary production (GPP), and respiration (R) rate variability. Seasonal, monthly, and daily temporal scales in NEM, GPP, and R were also assessed. Environmental conditions were then compared to NEM to determine which factors were correlated with each temporal and spatial scale. There was significant NEM spatial variability on interbay, intrabay, and water column spatial scales. Significant spatial variability was ephemeral, so it was difficult to ascertain which environmental conditions were most influential at each spatial scale. Significant temporal variability in NEM on seasonal, monthly, and daily scales was found and it was correlated to temperature, salinity, and freshwater inflow, respectively. NEM correlated strongly with dissolved oxygen, temperature, and salinity, but the relationships where different in each bay. The dynamics of NEM on daily scales indicate that freshwater inflow events may be the main driver of NEM in the semiarid estuaries studied. The variable nature of NEM found here is further evidence that it is not valid to use single station monitoring deployments for assessment of whole estuarine ecosystem metabolic rates in large ecosystems. The relationship between NEM and temperature, salinity, and freshwater inflow events could drive predictive models assessing the potential influence of projected climate change and watershed development scenarios on estuarine metabolic rates.     

Integrating Multiple Natural Tags to Link Migration Patterns and Resource Partitioning Across a Subtropical Estuarine Gradient

Establishing links between migration patterns and trophic dynamics is paramount to ecological studies investigating the functional role habitats provide to resident and transient species. Natural tags in fishes, such as otolith chemistry and tissue stable isotopes, can help reconstruct previous environmental and dietary histories, although these approaches are rarely combined. A novel multiproxy natural tag approach was developed to estimate immigration patterns of juvenile Atlantic croaker Micropogonias undulatus, across contrasting salinity gradients in three subtropical estuaries of the western Gulf of Mexico. Juvenile young-of-year Atlantic croaker were collected along a latitudinal gradient that included positive, neutral, and negative estuaries, based on physicochemical (temperature, salinity, dissolved element) and isotopic (δ¹⁵N and δ¹³C) parameters. Otolith elemental chronologies of Sr/Ca and Ba/Ca were used to classify migratory types within each estuary, while tissue-specific isotope ratios revealed time since recent (liver~weeks) and longer term (muscle~months) diet shifts. Nitrogen isotopes in both liver and muscle tissues were highly correlated, suggesting tissue equilibrium and estuarine residence of at least 3 months, with geographic δ¹⁵N gradients reflecting the magnitude of anthropogenic nutrient enrichment within each estuary. Differences in isotopic equilibrium of muscle-liver δ¹³C values and variation in marginal edge otolith Sr/Ca and Ba/Ca suggested recent shifts in carbon source and habitat utilization, reflecting individualized movement across seascapes and connectivity of habitat mosaics. The multiproxy approach presented here identified diverse migration patterns and linked feeding and movement on regional (inter-estuary), local (intra-estuary), and individual scales to improve our understanding of habitat function across estuarine gradients.     

Evolution of Mid-Atlantic Coastal and Back-Barrier Estuary Environments in Response to a Hurricane: Implications for Barrier-Estuary Connectivity

Assessments of coupled barrier island-estuary storm response are rare. Hurricane Sandy made landfall during an investigation in Barnegat Bay-Little Egg Harbor estuary that included water quality monitoring, geomorphologic characterization, and numerical modeling; this provided an opportunity to characterize the storm response of the barrier island-estuary system. Barrier island morphologic response was characterized by significant changes in shoreline position, dune elevation, and beach volume; morphologic changes within the estuary were less dramatic with a net gain of only 200,000 m³ of sediment. When observed, estuarine deposition was adjacent to the back-barrier shoreline or collocated with maximum estuary depths. Estuarine sedimentologic changes correlated well with bed shear stresses derived from numerically simulated storm conditions, suggesting that change is linked to winnowing from elevated storm-related wave-current interactions rather than deposition. Rapid storm-related changes in estuarine water level, turbidity, and salinity were coincident with minima in island and estuarine widths, which may have influenced the location of two barrier island breaches. Barrier-estuary connectivity, or the transport of sediment from barrier island to estuary, was influenced by barrier island land use and width. Coupled assessments like this one provide critical information about storm-related coastal and estuarine sediment transport that may not be evident from investigations that consider only one component of the coastal system.     

The Declining Role of Organic Matter in New England Salt Marshes

The Northeast USA is experiencing severe impacts of a changing climate, including increased winter temperatures and accelerated relative sea level rise (RSLR). The sediment-poor, organic-rich nature of many Southern New England salt marshes makes them particularly vulnerable to these changes. In order to assess how marsh accretion has changed over time, we returned to Narragansett Bay, RI where salt marsh vertical accretion rates were documented almost 30 years ago. Using radionuclide tracers (²¹⁰Pb and ¹³⁷Cs), we observe no significant change in overall accretion rates (0.27–0.69 cm year^?1) compared to historical averages (0.24–0.60 cm year^?1), but we document a shift in how these marshes maintain elevation. Organic matter now plays a smaller role in contributing to vertical accretion across all study sites, declining by 22 % on average. We attribute this reduction to potentially higher decomposition rates fueled by higher water temperature. Inorganic matter also contributes less to accretion (declining by 44 % on average at marshes located more internal to the estuary), likely due to diminishing sediment supply in this region. With organic and inorganic solids accounting for less of the total accretion, several of the marshes are experiencing symptoms of swelling, with water and porespace contributing more towards accretion compared to historical values. Accretion rates (0.27–0.45 cm year^?1) at these organic-rich (>40 % sediment organic matter) marshes are predominantly lower than the current (30 years) rate of RSLR (0.41?±?0.07 cm year^?1). These results, combined with the increased rate of RSLR and the hardened shorelines inhibiting landward migration, call into question the long-term survivability of these marshes.     

A chemical survey of the Mississippi estuary

A “snap shot” survey of the Mississippi estuary was made during a period of low river discharge, when the estuarine mixing zone was within the deltaic channels. Concentrations of H⁺, Ca²⁺, inorganic phosphorus and inorganic carbon suggest that the waters of the river and the low salinity (<5‰) portion of the estuary are near saturation with respect to calcite and sedimentary calcium phosphate. An input of oxidized nitrogen species and N₂O was observed in the estuary between 0 and 4‰ salinity. The concentrations of dissolved NH₄ ⁺ and O₂, over most of the estuary, appeared to be influenced by decomposition of terrestrial organic matter in bottom sediments. The estuarine bottom also appears to be a source of CH₄ which has been suggested to originate from petroleum shipping and refining operations. Estuarine mixing with offshore Gulf waters was the dominant influence on distributions of dissolved species over most of the estuary (i.e., from salinities >5‰). The phytoplankton abundance (measured as chlorophylla) increased as the depth of the mixed layer decreased in a manner consistent with that expected for a light-limited ecosystem. Fluxes of NO₃ ^?+NO₂ ^? and soluble inorganic phosphorus to the Gulf of Mexico were estimated to be 3.4±0.2×10³ g N s^?1 and 1.9±0.2 g P s^?1 respectively, at the time of this study.