Effective methods for assessing ecological quality in intertidal soft-sediment habitats

Impacts of anthropogenic pollution on marine ecosystems are being addressed by legislation to protect and restore coastal and transitional waters. A range of biological measures have been investigated for their ability to indicate anthropogenic disturbance in subtidal soft-sediment habitats, but little work to date has focussed in intertidal habitats. This study investigated the sensitivity of communities, individual taxa, diversity indices and biotic indices to nutrient and organic enrichment in intertidal soft-sediment habitats. Variation in macrofaunal communities was more strongly associated with anthropogenic stressors than with natural environmental variation. Two multimetric indices, M-AMBI and IQI, were more closely associated with nutrient and organic pollution than the AMBI and ITI indices. Intertidal monitoring based on existing monitoring tools offers a cost effective alternative to subtidal monitoring and has potential to form the basis for an ecosystem level approach.     

Threats to macroalgal coralligenous assemblages in the Mediterranean Sea

Coralligenous habitat is one of the most important coastal systems of the Mediterranean Sea. This paper evaluates the main threats to macroalgal coralligenous habitats through a review of the relevant literature. Sedimentation, nutrient enrichment and biological invasions can cause severe alterations in the structure of coralligenous assemblages due to the regression of perennial structuring species and increases in populations of ephemeral algae. Under pristine conditions, mechanical disturbance seems to be easily mitigated by the recovery capability of coralligenous assemblages; however, such disturbances seriously affect coralligenous structure if they occur in concert with other stressors. Important synergetic effects among all the studied anthropogenic disturbances are also highlighted. The main consequences of the considered stressors are the loss of the complexity of macroalgal assemblages and the deterioration of both alpha and beta diversity.     

Challenging assumptions of future coastal habitat development around the UK

One habitat management requirement forced by 21st century relative sea‐level rise (RSLR), will be the need to re‐comprehend the dimensions of long‐term transgressive behaviour of coastal systems being forced by such RSLR. Fresh approaches to the conceptual modelling and subsequent implementation of new coastal and peri‐marine habitats will be required. There is concern that existing approaches to forecasting coastal systems development (and by implication their associated scarce coastal habitats) over the next century depend on a certain premise of orderly spatial succession of habitats. This assumption is shown to be questionable given the possible future rates of RSLR, magnitude of shoreline retreat and the lack of coastal sediment to maintain the protective morphologies to low‐energy coastal habitats. Of these issues, sediment deficiency is regarded as one of the major problem for future habitat development. Examples of contemporary behaviour of UK coasts show evidence of coastal sediment starvation resulting from relatively stable RSLR, anthropogenic sealing of coastal sources, and intercepted coastal sediment pathways, which together force segmentation of coastal systems. From these examples key principles are deduced which may prejudice the existence of future habitats: accelerated future sediment demand due to RSLR may not be met by supply and, if short‐ to medium‐term hold‐the‐line policies predominate, long‐term strategies for managed realignment and habitat enhancement may prove impossible goals. Methods of contemporary sediment husbandry may help sustain some habitats in place but otherwise, instead of integrated coastal organization, managers may need to consider coastal breakdown, segmentation and habitat reduction as the basis of 21st century coastal evolution and planning. Copyright © 2006 John Wiley & Sons, Ltd.     

Validation of soft bottom benthic habitats identified by single-beam acoustics

Acoustic diversity charts were produced for a Portuguese soft bottom mid-shelf area, depth from 30 to 90 m, using a single-beam echo sounder coupled to the acoustic systems QTC VIEW Series IV and V. A similar acoustic pattern was identified by both systems, which, after ground-truth interpretation based in available sediment and biological data, established a preliminary spatial distribution model of the benthic habitats in this coastal area. However, some of the acoustic areas were interpreted using one or very few sediment and benthic samples. A specific validation survey was conducted a posteriori, in which the positioning of the sediment and benthic community sampling sites was based on the acoustic diversity previously identified. The results clearly confirm the benthic habitats distribution model suggested by the acoustic method, indicating a high potential for the use of such approach in the identification and mapping of large-scale soft bottom coastal shelf habitat diversity.     

Plankton of the Baltic estuarine ecosystems with emphasis on Neva Estuary: a review of present knowledge and research perspectives

Different levels of eutrophication and pollution in the Baltic coastal waters in general, and in estuaries particularly define variations in the buffering capacity of ecosystems of these important filter zones between rivers and the adjacent Baltic Proper. Phyto- and zooplankton in the estuaries form important components of the pelagic food webs that participate in producing and structuring the matter, energy, and information fluxes in the ecosystems. Due to salinity gradients, estuaries provide a large variety of aquatic habitats for native populations of marine, brackish and fresh water plankton species. Non-indigenous planktonic species that expand their bio-geographical range and invade the Baltic coastal ecosystems also find favourable environments, establish permanent populations there, and impact aboriginal ecosystems. The dynamics of abundance, species diversity, population structure, productivity of planktonic communities, and peculiarities of trophic interactions in different Baltic estuaries are influenced by a number of common environmental factors. Being measured on the unified basis and monitored, changes (or stability) of structural and functional parameters of plankton communities can serve as indicators of alterations to the ecosystems. Comparative analyses and quantitative estimates of long-term changes in phyto- and zooplankton can contribute to evaluation of functional response of Baltic coastal ecosystems to anthropogenic stress. Both theoretical (modeling) and empirical studies of interactions within plankton communities aimed at the assessment of the role of planktonic organisms in water quality regulation, and applicability of these data for the evaluation of the status of ecosystems and their management can be considered as major goals for the future investigations in Baltic estuaries.     

Effects of anthropogenic disturbance on the abundance and size of epibenthic jellyfish Cassiopea spp

Jellyfish blooms in pelagic systems appear to be increasing on a global scale because of anthropogenic impacts, but much less is known about the link between human activities and epibenthic jellyfish abundance. The aim of this study was to investigate whether the epibenthic jellyfish, Cassiopea spp., were found in greater abundance, and attained larger sizes, in coastal habitats adjacent to high human population densities compared to sites adjacent to uninhabited areas on Abaco Island, Bahamas. Cassiopea spp. were found to be significantly more dense and larger in areas with high human population densities. Ambient nutrient levels and nutrient content of seagrass were elevated in high human population density sites, and may be one mechanism driving higher abundance and size of Cassiopea spp. Cassiopea spp. may have important effects on community structure and ecosystem function in critical coastal ecosystems (e.g., seagrass beds), and their impacts warrant further study.     

Benthic community response to habitat variation: A case of study from a natural protected area,the Celestun coastal lagoon

Little information currently exists on spatial and temporal benthic community variations in tropical coastal lagoons. Here, the benthic community response to habitat variation in the Celestun coastal lagoon, northwest Yucatan peninsula, was seasonally examined during the 1994–1995 climatic cycle into a grid of 12 sampling sites distributed along the salinity gradient of the lagoon. Habitat variation was assessed through physical factors associated both to the water column (e.g. salinity) and the bottom sediment (e.g. sand, silt and clay fractions). The benthic community response was assessed through species diversity measures and abundance. Under the influence of climatic seasonality, variations in habitat conditions followed by changes in the benthic community characteristics were expected. Results from two-way ANOVAs showed that for the period of study, Celestun lagoon was more heterogeneous along the spatial axis of variability than along the temporal one. Multiple regression analysis showed that salinity was spatially the main factor influencing the benthic community characteristics. Temporally, the sediment characteristics were observed to exert significant effects on the species diversity characteristics but not on abundance. Other variables assessed (dissolved oxygen, pH, temperature and water column transparency) exhibited no significant covariance with species diversity and abundance. Since generated from historical data, these results have the potential to be useful as a benchmark to the establishment of monitoring programs in the light of the increasing anthropogenic pressure on the natural resources of the lagoon and surrounding coastal area.     

Cumulative impacts on seabed habitats: An indicator for assessments of good environmental status

The European seas are under anthropogenic pressures impacting the state of water quality, benthic habitats and species. The EU Marine Strategy Framework Directive (MSFD) requires the Member States to assess the impacts of pressures and make a programme of measures leading to good environmental status (GES) by 2020. This study presents a method for assessing the quantity and distribution of anthropogenic impacts on benthic habitats in the Baltic Sea by using spatial data of human pressures and benthic habitats. The southern sub-basins were more extensively impacted than the northern sub-basins. Over the entire sea area, deep sea habitats were more impacted than shallower infralittoral and circalittoral habitats. Sand and coarse sediments were the seabed types relatively most impacted in the Baltic Sea scale. A comparison against tentative thresholds for GES showed that in the sub-basin scale only one third of the habitat types was in GES.     

岱海水体及沉积物细菌多样性及群落组成特征

采用高通量测序技术,研究了内蒙古岱海流域入湖河流、湖水及沉积物细菌多样性及群落组成.结果显示,细菌多样性从高到低依次为：沉积物>河流>湖泊.聚类分析表明入湖河流、湖水和沉积物细菌群落可分为明显不同的3支,说明这3种生境中细菌群落结构有较大差异.物种注释结果表明,河流中优势细菌菌群为髌骨细菌(Patescibacteria)、变形菌门(Proteobacteria)、拟杆菌门(Bacteroidetes)和放线菌门(Actinobacteria);湖水中优势细菌菌群为放线菌门(Actinobacteria);而沉积物中优势细菌菌群为变形菌门和绿弯菌门(Chloroflexi).典范对应分析及Monte Carlo检验表明,电导率和悬浮物含量对水体中(河流与湖泊)细菌群落影响显著,二者共解释了细菌群落变化的86.5%;而冗余分析及Monte Carlo检验表明,泥深、磁化率和总有机碳对沉积物中细菌群落影响显著,三者共解释了细菌群落变化的47.9%.近30年来,岱海地区气候变化和人类活动导致湖水咸化,沉积物碳氮指标显著增长.岱海水体及沉积物细菌多样性及群落组成的差异及其主要驱动因...     

Sensitivity of coastal waters to anthropogenic trace metal emissions

Trace metal concentrations in the waters of the Gulf of St. Lawrence and the Scotian Shelf and their sensitivity to changes in the composition of the major contributor of fresh water, the St. Lawrence River, are assessed. Comparison of the levels of trace metals in eastern Canadian coastal waters with those in other coastal waters of the world reveals that the former area generally has lower trace metal concentrations and is, therefore, probably less contaminated than elsewhere. The increased anthropogenic activity in the St. Lawrence drainage basin required to increase the levels of trace metals in receiving coastal waters by detectable amounts is discussed. We demonstrate that faster and more reliable warning of changes due to anthropogenic activity will be revealed through river monitoring than through monitoring of coastal waters. Changes in the marine environment can then be assessed through a thorough understanding of the geochemical behaviour of trace metals in nearshore waters.     

Early evaluation of coastal nutrient over-enrichment: new procedures and indicators

Recent studies have provided compelling evidence for an accelerated anthropogenic impact on coastal systems, resulting in intense inputs of materials and nutrients from the continent. This has led scientists and policymakers to encourage the implementation of monitoring programmes, which have resulted in the multiplicity of datasets. However surprisingly, only a few attempts have been made to couple observations with statistical and mathematical tools to detect, as soon as the data become available perturbations in coastal systems. Here, we propose new mathematical procedures to evaluate the state of a system, based on the building of relative reference state and indicators of nutrient over-enrichment. The techniques were tested in some French coastal systems using data from the programme SOMLIT. Applied to this dataset, the multivariate procedures rapidly identified and evaluated anthropogenic nutrient anomalies from the continent on three sites (Wimereux, Roscoff and Villefranche-sur-Mer) from 1997 onwards.     

The distribution of Potamothrix bavaricus (Oeschmann, 1913) (Oligochaeta) in anthropogenic freshwater habitats of an industrialised area (Upper Silesia, Poland)

The studies have revealed that Potamothrix bavaricus (Oeschmann, 1913), generally rare in Poland, is a common species in the benthic oligochaete fauna of different anthropogenic freshwater habitats in a heavily industrialised area of Poland. It was often found in habitats with significant salinity, a high total hardness and a large content of nutrients. The evident resistance to various pollutants enables the settlement of P. bavaricus in such habitats, which are unsuitable for other oligochaete species.     

Courage under fire: Seagrass persistence adjacent to a highly urbanised city–state

Due to increasing development Southeast Asia’s coastlines are undergoing massive changes, but the associated impacts on marine habitats are poorly known. Singapore, a densely populated island city–state, is a quintessential example of coastal modification that has resulted in the (hitherto undocumented) loss of seagrass. We reconstructed the historic extent and diversity of local seagrass meadows through herbarium records and backwards extrapolation from contemporary seagrass locations. We also determined the current status of seagrass meadows using long-term monitoring data and identified the main threats to their presence in Singapore. Results show that, even though ∼45% of seagrass has been lost during the last five decades, species diversity remains stable. The main cause of seagrass loss was, and continues to be, land reclamation. We conclude that strict controls on terrestrial runoff and pollution have made it possible for seagrass to persist adjacent to this highly urbanised city–state.     

Nutrient mediated stress on the marine communities of a coastal lagoon (Puerto Galera, Philippines)

Puerto Galera Bay is a coastal lagoon with a variety of marine habitats and high species diversity. It is an area in the Phillippines where the growing influence of human activities is affecting the quality of its marine resources. This study examined the distribution and behaviour of nutrients and the physical hydrography of Puerto Galera Bay and determined how its physico-chemical nature affected the condition of biotic components in the bay. The relative importance of the nitrogen and phosphorus signals were used as indicators to implicate the influence of sewage and run-off into the bay. A nutrient pool accumulated in the bay as a result of low flushing rates. The interaction of hydrodynamic forcing with the biota have implications on the phytoplankton production and coral communities in the area.     

Vegetation recruitment in an enhanced floodplain: Ancillary benefits of salmonid habitat enhancement

Widespread loss and degradation of riverine habitats due to dams, diversions, levees, and human development have led to an increase in river habitat enhancement projects in recent decades. These projects typically focus on improving either terrestrial (e.g., riparian vegetation) or aquatic (e.g., fish spawning and rearing) habitats, and do not commonly address the relationship between the two systems. However, there is abundant evidence that fundamental linkages exist between terrestrial and aquatic ecosystems, and anthropogenic impacts such as urban expansion, agricultural activities, and river impoundment can synergistically degrade both systems. This study examines the effects of adult and juvenile salmonid habitat restoration on recruitment, density, and composition of riparian vegetation in an area heavily impacted by mining and flow regulation. For a year following in-channel coarse sediment placement and floodplain construction in an area previously covered with coarse mine tailings, we compared the abundance, richness and diversity of vegetation across four treatments: the newly constructed floodplain, isolated mine tailings, mine tailings near an access road, and a remnant riparian area that was less impacted by mining. Richness and diversity were higher in the floodplain than in any of the other treatments; we identified a total of 15 plant families in the floodplain treatments, as compared to three to five families in the other treatments. We observed significant differences in plant assemblage composition between treatments, with higher richness of primarily obligate or facultative wetland plant taxa in the floodplain treatment. This study demonstrates that restoring hydrological linkages between aquatic and terrestrial habitats, and redistribution of sediment size classes altered by mining, can create conditions that promote rapid wetland plant colonization, enhancing biodiversity and improving ecosystem function.     

Dredging-induced nutrient release from sediments to the water column in a southeastern saltmarsh tidal creek

Dredging is a large-scale anthropogenic disturbance agent in coastal and estuarine habitats that can profoundly affect water quality. We examined the impact of a small-scale dredging operation in a salt marsh in South Carolina by comparing nutrient levels (NH(4)(+), NO(x), PO(4)(-)) and total suspended solid concentrations before and during dredging activities. Nutrient enrichment was evaluated within the context of tidal, seasonal, and inter-annual variability by using long-term water chemistry data provided by the North Inlet-Winyah Bay National Estuarine Research Reserve. The conditions of the dredging permit (i.e., its relatively small scale), the season chosen for the work (fall-winter), the nature of the sediments dredged (coarse-grained), and the amount of natural variability in the estuary's water chemistry (even on a daily time-scale) all minimized the impact of the dredging activities. Results of this study will add to the limited body of empirical data that should be considered in evaluating future dredging permit applications related to shallow estuarine waterways.     

The impact of coastal urbanization on the structure of phytobenthic communities in southern Brazil

The anthropogenic pressures on coastal areas represent important factors affecting local, regional, and even global patterns of distribution and abundance of benthic organisms. This report undertakes a comparative analysis of the community structure of rocky shore intertidal phytobenthos in both pristine like environments (PLE) and urbanized environments (UBE) in southern Brazil, characterizing variations on different spatial scales. Multivariate analysis of variance indicated that the PLE is characterized by a larger number of taxa and an increased occurrence of Rhodophyta species in relation to UBE. In contrast, UBE were dominated by opportunistic algae, such as Cladophora and Ulva spp. Significance tests further indicated higher species richness and Shannon-Wiener diversity on the PLE in relation to UBE. Here we provide data showing the magnitude of seaweed biodiversity loss and discuss direct and indirect consequences of unplanned urbanization on these communities.     

Marine debris impacts to a tidal fringing-marsh in North Carolina

We evaluated injuries to Spartina alterniflora by debris items common to North Carolina coastal waters as a function of debris type (wire blue crab pots, vehicle tires, and anthropogenic wood) and deployment duration, and monitored S. alterniflora recovery following debris removal. Injuries sustained by S. alterniflora and subsequent recovery, varied considerably between debris types. Differences were likely due to dissimilarities in the structure and composition of debris. Tires caused an immediate (within 3 weeks) and long-term impact to S. alterniflora; tire footprints remained devoid of vegetation 14 months post-removal. Conversely, crab pot impacts were not as abrupt and recovery was short-term (<10 months). We suggest that removal programs specifically target habitats that are susceptible to negative impacts (e.g., salt marsh) and prone to debris accumulation. Management would benefit from the inclusion of habitat information in removal databases.     

Seagrass population dynamics and water quality in the Great Barrier Reef region: a review and future research directions

Seagrasses in the Great Barrier Reef region, particularly in coastal habitats, act as a buffer between catchment inputs and reef communities and are important habitat for fisheries and a food source for dugong and green turtle. Within the Great Barrier Reef region there are four different seagrass habitat types now recognised. The spatial and temporal dynamics of the different types of seagrass habitat is poorly understood. In general seagrass growth is limited by light, disturbance and nutrient supply, and changes to any or all of these limiting factors may cause seagrass decline. The capacity of seagrasses to recover requires either recruitment via seeds or through vegetative growth. The ability of seagrass meadows to recover from large scale loss of seagrass cover observed during major events such as cyclones or due to anthropogenic disturbances such as dredging will usually require regeneration from seed bank. Limited research into the role of pollutants on seagrass survival suggests there may be ongoing impacts due to herbicides, pesticides and other chemical contaminants. Further research and monitoring of seagrass meadow dynamics and the influence of changing water quality on these is needed to enhance our ability to manage seagrasses on the Great Barrier Reef.     

Maintenance of the fisheries environment and efforts to increase the resources in the coastal waters of Japan

The paper describes the present status of Japan's coastal fisheries resource and the anthropogenic threats to that resource. The increasing industrialization and urbanization of the Japanese coastal fringe has created threats to the important fish and shellfish resource. Legislative mechanisms, such as quality standards, together with an increasing mariculture are used to ensure the sustainable development of the coast.