Feeding ecology of the northern pipefish,Syngnathus fuscus,in a seagrass community of the lower Chesapeake Bay

Examination of gut contents of the northern pipefish,Syngnathus fuscus, revealed that gammarid amphipods, caprellid amphipods, isopods, and calanoid copepods were the dominant food items during the sevenmonth study period.Gammarus mucronatus, calanoid copepods, andErichsonella attenuata were the seasonally dominant prey items in the spring, summer, and fall, respectively.G. mucronatus and calanoid copepods were consumed in approximate proportion to their numerical abundance in the environment, whileE. attenuata, present in rather uniform densities throughout the study period, was extensively consumed only in the late summer and fall. An ontogenetic pattern of prey consumption was evident, in addition to the seasonal pattern. Comparison ofG. mucronatus andE. attenuata size ranges from the field and in pipefish guts revealed thatS. fuscus preyed upon the smaller size classes of each species, and that mean size of prey consumed was positively related to fish size.     

Zooplankton abundance and community structure in a mesohaline North Carolina estuary

The lower Neuse River Estuary is a temperate mesohaline system which forms the major southern tributary of Pamlico Sound, North Carolina. The crustacean zooplankton of this well-mixed system were sampled for a 20-month period from May 1988 through December 1989. A submersible pump was used to sample both the entire water column and the sediment surface. Seasonal dominants included the calanoid copepodsAcartia tonsa andParacalanus crassirostris in summer, the cyclopoid copepodOithona colcarva in fall, the cladoceranPodon polyphemoides in winter, and harpacticoid copepods in spring. Non-naupliar biomass over the study period consisted of 38.8%A. tonsa, 7.7%P. crassirostris, 21.2%O. colcarva 23.6% harpacticoid copepods, and 6.0% cladocerans. The remainder of the biomass consisted ofPseudodiaptomus coronatus and barnacle nauplii. Mean total copepod densities ranged from 600 m^?3 in May 1988 to 180,000 m^?3 in August 1988. Mean copepod densities for 1989 were 25,000 m^?3. Maximum densities during both years occurred during summer, with subsequent descreases throughtout the year until early spring. Abundances of total copepods, and ofAcartia tonsa in particular, were significantly correlated with water temperature, but with neither chlorophylla, phytoplankton productivity, nor any of an array of other physical or chemical variables. Regression analyses using data from this investigation, and supported by results from other regional studies, indicate that water temperature is likely the single most important variable predicting zooplankton temporal abundance in North Carolina estuaries.     

Contamination of the biological compartment in the Seine estuary by Cd, Cu, Pb, and Zn

A study of contamination of the biological compartment of the Seine estuary was carried out by measuring the concentrations of cadmium (Cd), copper (Cu), lead (Pb), and zinc (Zn) in 29 estuarine and marine species belonging to 6 phyla. Species came from three main biological zones of the estuary: the Seine channel (copepods, mysids, shrimps, and fish), the intertidal mudflats (Macoma balthica community), and the subtidal mudflats (Abra alba community). Two fish species, the bass (Dicentrarchus labrax) and the flounder (Platichthys flesus), were also selected for analyses. A comparison of metal concentrations in estuarine species of the Seine with those found in the same species collected on contaminated and non-contaminated sites showed a contamination of the estuary by Cu, Zn, and Pb. For Cd, the contamination is mainly observed in bivalves, although the concentrations observed were low and less than 2 μg g^?1 d.w. High concentrations of Cu were found in copepods, shrimps, and fish. Pb contamination was mainly found in species living in the Seine channel where the copepodEurytemora affinis shows an average concentration of 22 μg g^?1 d.w. High concentrations of Pb (>10 μg g^?1 d.w.) were found in deposit-feeders benthic invertebrates. Elevated levels of Zn were seen in all species collected in the Seine estuary, including fish and in particular small flounder. The concentrations of Cd, Cu, Pb, and Zn found in edible estuarine species (shrimp and fish) were in the same order of magnitude than those found in fish and shrimps fished along the French coast.     

Feeding ecology of the gulf silverside,Menidia peninsulae,near Crystal River,Florida, with notes on its life history

Feeding habits ofMenidia peninsulae were analyzed monthly over a one year period and compared to planktonic prey available at the capture site. Three feeding stages were found: (1) In early spring, young-of-the-year fed on tychoplankton and detritus. (2) From late spring through winter,M. peninsulae preyed selectively on calanoid copepods and cypris larvae. (3) GravidM. peninsulae fed primarily on amphipods and larval silversides. In the Crystal River area,M. peninsulae reproduce in early spring. Silversides apparently migrate from the higher salinity bays to the lower salinity marshes in the summer, and then move back into the bays in fall.     

Diet of winter flounder in a New Jersey estuary: Ontogenetic change and spatial variation

Juvenile and adult winter flounder,Pseudopleuronectes americanus Walbaum (Pleuronectidae), from the Navesink River and Sandy Hook Bay, New Jersey, U.S., were examined for ontogenetic, seasonal, and spatial variation in dietary content. Fish (n=1291 non-empty) were placed by cluster analysis of dietary content into three size groups: 15–49, 50–299, and ≥300 mm total length. Clear ontogenetic patterns were revealed, in particular the disappearance of calanoid copepods from the diet as fish grew >50 mm and an increase in number of taxa in the diet with growth. Fish in size group 1 fed upon spionid polychaetes, the calanoid copepodEurytemora affinis, and ampeliscid amphipods. Fish in size group 2 added various species of polychaetes, amphipods, and siphons of the bivalveMya aremaria to their diets. Size group 2 was present during all months of the survey, but only minor seasonal differences in their diet were apparent. One obvious change was the increase in consumption of the shrimpCrangon septemspinosa in summer and fall. Size group 3 fish, collected mainly in fall, ate large volumes ofM. arenaria and glycerid polychaetes. Cluster analysis showed a largescale spatial pattern in diet among fish of size group 1, related to the presence ofE. affinis in winter flounder diets in the river and a marsh cove in the bay. Small-scale spatial differences in diets of fish in size group 2 were possibly related to prey distribution.     

Seasonality and abundance of ichthyoplankton in great South Bay,New York

The seasonality and abundance patterns of ichthyoplankton were investigated during 1985–1986 in Great South Bay, New York, USA. Eggs representing 17 species and larvae representing 23 species of fish were identified. Bay anchovy, Anchoa mitchilli, was the most abundant ichthyoplankter, comprising >96% of the eggs and >69% of the larvae collected. Bay anchovy spawned throughout the bay from late May through August, with peak baywide densities of >200 eggs and 6 larvae m^?3. Eggs of windowpane flounder (Scophthalmus aquosus) ranked second in abundance and were present in both spring and fall. Other dominant larvae were winter flounder (Pleuronectes americanus) and American sand lance (Ammodytes americanus). Their combined density reached 8 m^?3 and accounted for the winter peak in larvae. The seasonality of abundance of larval fish was strongly correlated with reported densities of copepod nauplii prey.     

Patterns in seasonal abundance,growth and biomass of the atlantic silverside,Menidia menidia,in a New England estuary

Patterns in seasonal abundance (no. per m² surface area), growth and biomass (g per m² surface area) of an annual fish, the Atlantic silverside, Menidia menidia (L.) were investigated in a marsh and more seaward bay region of Essex Bay, Massachusetts from August 1976 to May 1978 using a quantitative beach seining technique. Silverside abundance varied greatly by season and year class during the study period. Abundance was high in 1976 but winter mortality (99%) left an adult density of only .01 per m² surface area in the marsh during spring 1977. Resultant 1977 year class density in the marsh was 1.88 per m² by late fall 1977 but winter mortality again produced an adult density of .01 per m² in spring 1978. Abundance was generally higher in the marsh than in the bay region especially during spring and late fall when catches in the bay were negligible. Based on catch rate comparisons, the summer and fall juvenile abundance of the 1976 year class was much higher than the juvenile abundance of the 1977 year class. Coincidentally, mean lengths and condition of the abundant 1976 year class in the late fall were significantly lower than those of the 1977 year class, suggesting density dependent population regulation. In both years, juveniles grew rapidly and reached full adult size by November when an offshore movement to deeper waters outside Essex Bay occurred. Biomass peaked in the marsh region in late fall 1977 at 7.8 g per m² wet weight. Winter mortality was size selective, favoring larger individuals. The annual life history design of M. menidia including an offshore winter movement and high winter mortality suggests that silversides represent an important pathway of energy flow from marsh to offshore trophic systems.     

The unique,widely distributed,estuarine sea anemone,Nematostella vectensis Stephenson: A review,new facts,and questions

The small, burrowing, edwardsiid sea anemone Nematostella vectensis is widely distributed in estuaries and bays. Most typically it occurs in pools in marshes though it may occur subtidally as well. We have compiled records of its occurrence in North America from Nova Scotia to Georgia along the shores of the Atlantic Ocean, from Florida to Louisiana in the Gulf of Mexico and from California to Washington on the Pacific coast. To date we have found no records of its presence in Alabama or Texas, though it is present in all other of the contiguous coastal states of the United States. The species also occurs in England. We have obtained living specimens from many locations and have crossed females from England, Maryland, Georgia, California, Oregon, and Washington with males from Nova Scotia, Maryland, Georgia, and Oregon. These 24 crosses all yielded viable first-generation anemones that in turn produced second-generation animals. We accept this as proof that this widely distributed anemone is a single species. We have obtained living N. vectensis from 11 areas. Of these, only samples from Maine, Maryland, Georgia, and Oregon contained both sexes. The sample from Nova Scotia was all male and our samples from England, New Hampshire, California, and Washington were all female. We hypothesize that the unisexual samples were from clones resulting from asexual reproduction in this species. *** DIRECT SUPPORT *** A01BY066 00015     

Predation on soft-shell clams,Mya arenaria,by the common mummichog,Fundulus heteroclitus

Invertebrate predation has been cited as the major factor determining post-settling survival of the soft-shell clam, Mya arenaria. Feeding studies on common mummichogs, Fundulus heteroclitus, in Essex Bay, Massachusetts, from July 1976 to June 1978 showed soft-shell clams to be an important diet item in fish greater than 55 mm TL. Biweekly quantitative seining from 16 April to 24 September 1977 revealed predation peaks in the spring and fall corresponding to March–April and June–July spawning periods for M. arenaria. In spring and fall 1977 and spring 1978, 38.5% of the male and 52.8% of the female mummichogs sampled over 55 mm TL averaged 6.77 and 7.32 clams per stomach respectively. The maximum number of clams per stomach was 49 (108 mm female), and 47 (100 mm male). Quantitative seining at low tide yielded mummichog densities from 0.35 to 6.04 fish/m². Combining mummichog density estimates with soft-shell clam predation data gave a possible consumption of 546,000 M. arenaria per km low tide shoreline per day during peak predation periods. Results indicate mummichog predation may equal or exceed invertebrate predation as a major cause of small (<12 mm) soft-shell clam mortality in the Gulf of Maine.     

Vertical distribution and feeding types of nematodes from Chetumal Bay, Quintana Roo, Mexico

The vertical distribution and feeding type of nematodes in sediments of Chetumal Bay, Mexico, were studied in five intertidal transects along the urbanized zone in June and December 1995. Sediments were collected with a PVC corer to 6-cm sediment depth and cut immediately into three equal 2-cm depth fractions. Nematode density varied from 7.4 × 10³ to 5.3 × 10⁵ m^?2 in June and from 1.7 × 10⁴ to 7.2 × 10⁵ m^?2 in December. In June, the epistrate feederPseudochromadora sp. was the most abundant in the deepest sediment fraction (4–6 cm), whereas epistrate feeders,Neotonchoides sp.,Desmodora sp., and the deposit feederBathylaimus australis were dominant in the top most sediment (0–2 cm). In December, deposit feeders,Desmolaimus zeelandicus, Parodontophora sp., and the epistrate feederOncholaimus oxyuris were the most abundant in the deepest sediment, whereasNeotonchoides sp. andPseudochromadora sp. dominated the first 2 cm of sediments. Highest nematode density was recorded in the uppermost sediment layer (0–2 cm). Feeding types showed different abundance among transects and between months. There was a seasonal change in vertical distribution of nematodes, with the highest abundance in the deepest sediment layer in December, possibly due to the effect of wind waves on sediments of Chetumal Bay. The trophic composition of the nematode fauna in Chetumal Bay showed a dominance of deposit feeders and epistrate feeders, most likely in response to organic enrichment that is typical of eutrophic environments.     

Shifts in Zooplankton Community Structure: Implications for Food Web Processes in the Upper San Francisco Estuary

Zooplankton are an important trophic link and a key food source for many larval fish species in estuarine ecosystems. The present study documents temporal and spatial zooplankton dynamics in Suisun Bay and the Sacramento–San Joaquin Delta—the landward portion of the San Francisco Estuary (California, USA)—over a 37-year period (1972–2008). The zooplankton community experienced major changes in species composition, largely associated with direct and indirect effects of introductions of non-native bivalve and zooplankton species. A major clam invasion and many subsequent changes in zooplankton abundance and composition coincided with an extended drought and accompanying low-flow/high-salinity conditions during 1987–1994. In the downstream mesohaline region, the historically abundant calanoid copepods and rotifers have declined significantly, but their biomass has been compensated to some extent by the introduced cyclopoid Limnothoina tetraspina. The more upstream estuary has also experienced long-term declining biomass trends, particularly of cladocerans and rotifers, although calanoid copepods have increased since the early 1990s due to the introduced Pseudodiaptomus spp. In addition, mysid biomass has dropped significantly throughout the estuary. Shifts in zooplankton species composition have also been accompanied by an observed decrease in mean zooplankton size and an inferred decrease in zooplankton food quality. These changes in the biomass, size, and possibly chemical composition of the zooplankton community imply major alterations in pelagic food web processes, including a drop in prey quantity and quality for foraging fish and an increase in the importance of the microbial food web for higher trophic levels.     

Mangrove ecology,aquatic primary productivity,and fish community dynamics in the Teacapán-Agua Brava Lagoon-Estuarine system (Mexican Pacific)

Aquatic primary productivity, mangrove ecology, and fish community dynamics were investigated in the Teacapán-Agua Brava lagoon-estuarine system, the most extensive mangrove ecosystem on the Pacific coast of Mexico with three species of mangroves distributed heterogeneously (Laguncularia racemosa, Rhizophora mangle, andAvicennia germinans). Tree density was 3,203 trees ha^?1 and basal area was 14.0 m² ha^?1. Litterfall was 1,417 g m^?2 yr^?1, characteristic of a productive riverine forest. The degradation constant forLaguncularia racemosa leaves varied from 1.71 to 4.7 yr^?1 and mean annual net aquatic productivity was 0.41 g C m^?3 d^?1. There were high concentrations of humic substances (up to 150 mg l^?1) early in the wet season. Seasonal variations of the above parameters seemed closely related to the ecology of fish populations. There were 75 fish species distributed in two principal assemblages associated with wet and dry seasons. Diversity and biomass analysis indicated 18 dominant species. Total biomass of the community in this coastal system was estimated at 10 g wet wt m^?2. The highest biomass occurred in the wet season. The most common fish species wereMugil curema, Achirus mazatlanus, Galeichthys caerulescens, Arius liropus, Diapterus peruvianus, Lile stolifera, Centropomus robalito, andEucinostomus sp., all of which have fishery importance. Primary productivity and fish community ecology are controlled by habitat characteristics, river discharge, and climatic seasonality.     

Seasonal Factors Influencing Copepod Abundance in the Maryland Coastal Bays

Maryland Coastal Bays differ in hydrography from river-dominated estuaries because of limited freshwater inflow from tributary creeks and more marine influence. Consequently, the copepod community structure may be different from that of the coastal ocean and river-dominated estuaries in the mid-Atlantic region. A 2-year study was conducted to describe copepod species composition and seasonal patterns in abundance and factors influencing the community structure. Seven copepod genera, Acartia, Centropages, Pseudodiaptomus, Parvocalanus, Eurytemora, Oithona, and Temora, in addition to harpacticoids were found. The copepod community was dominated by Acartia spp. (64%), followed by Centropages spp. (30%), unlike in river-dominated estuaries in the region where the copepod community is usually dominated by Acartia spp. followed by Eurytemora affinis. Acartia tonsa was the most abundant in summer and fall whereas Centropages spp., Temora sp., Oithona similis, E. affinis, and harpacticoids were most abundant in winter and early spring. Parvocalanus crassirostris and Pseudodiaptomus pelagicus were present in fall and winter but at relatively low densities. The highest mean density of copepods occurred in winter 2012 (36,437 m^?3) and the lowest in spring 2013 (347 m^?3). Low densities occurred through early summer (614 m^?3) coinciding with peak spawning by bay anchovy (Anchoa mitchilli). Bottom-up control via low phytoplankton biomass coupled with top-down control by ctenophores (Mnemiopsis sp.), mysids (Neomysis americana), and bay anchovy was probably responsible for the low copepod densities in spring and early summer. Temperature and salinity were also important factors that influenced the seasonal patterns of copepod species occurrence. The observed seasonal differences in the abundance of copepods have important implications for planktivorous fishes as they may experience lower growth rates and survival due to food limitation in spring/early summer when copepod densities are relatively low than in late summer/fall when copepod abundance is higher.     

Parasites and cyclopoid predators of age-0 fish in the Roanoke River,North Carolina

Altered river flow has been suggested as a cause for the low recruitment of striped bass,Morone saxatilis, in the Roanoke River (North Carolina) because of its effect on the proximity of zooplankton and larval striped bass. This results in unsuccessful feeding and subsequent starvation, which was considered to be a major mortality factor. Other mortality factors, such as parasitism and copepod predation on age-0 fish, may also be regulated to some extent by changes in river flow. The relationship of cestode plerocercoids, trematode metacercaria, mussel glochidia, and cyclopoid copepod predators with age-0 fish was evaluated in the lower Roanoke River and western Albemarle Sound from plankton net collections made in 1984 to 1986 and 1988. Plerocercoid prevalence was higher under low river flow conditions than under high flow conditions in darters (Percidae; 16.7% vs. 9.2%), minnows (Cyprinidae; 28.8% vs. 4.7%), andMorone (1.9% vs. 0%). Gut analysis of the age-0 fish revealed that copepods (source of the plerocercoids) were a major diet component ofMorone and darters but not of minnows or herring (Clupeidae). Decreases in river flow were associated with increases in copepod density (Pearson r=?0.62; p=0.0001) and plerocercoid prevalence inMorone (Pearson r=?0.29; p=0.03). The low correlation value forMorone may be quite strong considering the complexity of the variables associated with prevalence. Metacercaria were found only inMorone and minnows, and prevalence and mean intensity were less than that found for plerocercoids. Mussel glochidia prevalence was less than 0.5% for all affected taxa, an order of magnitude less that that found in other studies. The low value may indicate that the mussel population in the Roanoke River is declining. Prevalence of attacks by the predatory copepodMesocyclops edax on age-0 fish was similar to that in Chesapeake Bay, and striped bass was the primary prey. Spatial and temporal proximity of copepods and fish prey may be the key factors in regulating copepod attacks. The low prevalence of parasites and copepod predators seen in this tudy would suggest that mortality from these sources may not be a major factor in age-0 recruitment in this system. Confirmation of these conclusions would require a more controlled experimental approach.     

The cyclopoid copepods,Hemicyclops adhaerens andSaphirella sp., in the Damariscotta River estuary,maine, with a note to their possible relationship

During the 14-month collection period,Hemicyclops always appeared as naupliar stages andSaphirella as immature copepodite stages at 3 stations in the middle and lower estuary.Hemicyclops nauplii were abundant during late spring and summer, with a seasonal maximum of 7448/m³ in late spring at the upstream station.Saphirella stages were observed throughout the year, but higher population densities generally occurred in the summer and fall; the highest density was 3413/m³. Both species were usually more abundant upstream than downstream. The larvae may be life stages of a single bottom-dwelling species,Hemicyclops adhaerens.     

Phytoplankton biomass, cell diameter, and species composition in the low salinity zone of Northern San Francisco Bay estuary

Phytoplankton chlorophyll a concentration, biovolume, cell diameter, and species composition differed across the narrow, low salinity zone between 0.6‰ to 4‰ and may influence copepod food availability in the northern San Francisco Bay Estuary. The highest chlorophyll a concentrations (range 3.2–12.3 μg 1^?1), widest cell diameters (>5 μm diam), highest diatom densities and highest production rates of >10 μm diam cells occurred at the landward edge of the salinity zone in April during a strong spring tide and May during a strong neap tide. Near optimum predator/prey ratios, large prey estimated spherical diameters, and high chlorophyll a concentrations suggest these phytoplankton communities provided good food quantity and quality for the most abundant copepods, Eurytemora affinis, Sinocalanus doerrii, and Pseudodiaptomus forbesi. At the center of the zone, chlorophyll a concentrations, diatom densities, and production rates of >10 μm diam cells were lower and cell diameters were smaller than upstream. Downstream transport was accompanied by accumulation of phytoplankton with depth and tide; maximum biomass occurred on spring tide. The lowest chlorophyll a concentrations (1.4–3.6 μg 1^?) and consistently high densities (3,000–4,000 cells ml^?1) of <5 μm diam cells occurred at the seaward edge of the zone, where the green alga Nannochloris spp. and the bluegreen alga Synechococcus spp. were the most abundant phytoplankton. Low chlorophyll a concentrations and production rates of >10 μm diam cells, small prey estimated spherical diameters, and high predator/prey ratios suggested the seaward edge of the zone had poor phytoplankton food for copepodids and adult copepods. The seaward decrease in phytoplankton chlorophyll a concentration and cell diameter and shift in species composition in the low salinity zone were probably a function of an estuary-wide decrease in chlorophyll a concentration, cell diameter, and diatom density since the early 1980s that was enhanced in the low salinity zone by clam herbivory after 1987. *** DIRECT SUPPORT *** A01BY090 00008     

Organic carbon isotope ratios of recent sediments from coastal lagoons of the Gulf of Mexico,Mexico

The stable carbon isotope composition sedimentary organic carbon was determined in the sediments of seven coastal lagoons of the Gulf of Mexico, Mexico. For most of the lagoons the δ¹³C values for sediments ranged from ?20.1 to ?23.9%. Anomalously low values, ?26.8 to 29.3%. were determined in sediments of two of the studied lagoons, probably due to the presence of organic carbon from anthropogenic sources, naturally absent in these environments. The δ¹³C values determined in the tissues of oysters collected at the same time in the different lagoons were very similar to those recorded in the sediments.     

Sterols in sediments from Baffin Bay,Texas

Laminated sediments in Baffin Bay, Texas, consist of alternate layers of blue-green algal remains and terrigenous muds. These sediments resemble stromatolites and contain stenols and stannols. The relatively rare C-27, C-28 and C-29 Δ²²-5α-stenols and the commonly found Δ⁵ and Δ^5.22 sterols and stannols are present in the Baffin Bay sediments.     

Impact of Armored Shorelines on Shore-Zone Fish Density in a Mid-Atlantic,USA, Estuary: Modulation by Hypoxia and Temperature

Anthropogenic modifications of estuarine environments, including shoreline hardening and corresponding alteration of water quality, are accelerating worldwide as human population increases in coastal regions. Estuarine fish species inhabiting temperate ecosystems are adapted to extreme variations in environmental conditions including water temperature, salinity, and dissolved oxygen across seasonal, daily, and hourly time scales. The present research utilized quantitative sampling to examine the spatiotemporal distribution of shore-zone estuarine fish species in association with four unique shoreline types across a range of water temperature and dissolved oxygen conditions. Fish were collected from the intertidal and shallow subtidal region of four shoreline types, Spartina alterniflora marsh, Phragmites australis marsh, riprap, and bulkhead, in the summer and fall of 2009 and 2010. Analyses were performed to (1) compare mean fish density among shoreline types across all water conditions and (2) explore relationships of the complete fish assemblage, three functional species groupings, and two fish species (Fundulus heteroclitus and Menidia menidia) to unique shoreline/water conditions. Significantly greater mean fish densities were found along S. alterniflora shorelines than armored shorelines. Several metrics including fish density, species richness, and occurrence rates suggest S. alterniflora shorelines may serve as a form of refuge habitat during periods of low dissolved oxygen and high temperatures for various species, particularly littoral-demersal species including F. heteroclitus. Potential mechanisms that could contribute to a habitat providing refuge during adverse water quality conditions include tempering of the adverse condition (decreased temperatures, increased dissolved oxygen), predation protection, and increased foraging opportunities.     

Using winter flounder growth rates to assess habitat quality across an anthropogenic gradient in Narragansett Bay, Rhode Island

We used growth rates of juvenile winter flounderPseudopleuronectes americanus to assess anthropogenic influence on habitat quality at three sites in Narragansett Bay, Rhode Island. The upper bay site, Gaspee Point, had the highest population density and concentration of total nitrogen; human inputs decreased down bay. Growth rates of individually marked fish were measured in three 15-d experiments from June 8 to July 6, 1998 in 1-m² cages placed at upper, middle, and lower bay sites. Water temperature, salinity, dissolved oxygen (DO), and benthic food were also measured. Stable isotopes of nitrogen and carbon were measured in experimental fish as possible indicators of nutrient enrichment and to identify organic carbon sources. Growth rates were 0.22–0.60 mm d⁻¹, with the highest average at the mid-bay site. Growth was initially fastest at Gaspee Point, but dropped off as DO concentrations fell. Step-wise multiple regression indicated that location (upper, middle, or lower bay) explained most of the variability in fish growth (40%). Coefficients of other significant variables indicated that fish grew faster at lower salinities, smaller sizes, and with decreased time that DO was below 2.3 mg l⁻¹. Benthic prey varied among sites and there was significantly less food and fewer species at Gaspee Point.Polydora cornuta was a favored food at all sites and was found in over half the stomachs. Values of δ¹⁵N in fish and sediments did not reflect differences in total nitrogen concentrations recorded near the sites. We suggest that anthropogenic influences, such as nutrients and sewage, affected habitat quality by reducing DO, which lowered fish growth rates.