Deep penetrating benthic oxygen profiles measured in situ by oxygen optodes

For the first time in situ, deep penetrating O₂ profiles were measured in abyssal sediments in the western South Atlantic. Construction of deep penetrating O₂ optodes and adaptation to a benthic profiling lander are described. The opto-chemical oxygen sensors allow measurements to a depth of 55 cm in marine sediments. A vertical resolution of 0.5 cm was used to determine the O₂ dynamics in those oligotrophic deep sea sediments; the oxygen concentration across the sediment water interface was measured with a resolution of 100 μm. Oxygen penetration depth (OPD), diffusive oxygen uptake (DOU) and oxygen consumption rates were determined at four stations north of the Amazon fan and one at the Mid-Atlantic Ridge. Diffusive oxygen uptake rates ranged from 0.1 to 0.9 mmol m⁻² d⁻¹; the oxygen penetration depth ranged from 8 to 26 cm. Carbon consumption rates calculated from the diffusive oxygen uptake rates were in the range of 0.3–3.0 g C m⁻² a⁻¹. Comparison between in situ and laboratory DOU and OPD measurements confirmed previous findings that core recovery and warming have strong effects on the oxygen dynamics in deep sea sediments. Laboratory measurements yielded a decrease of 50–75% in OPD and consequently an increase in DOU by 1.5 and 18-times. Deep penetrating oxygen optodes provide a new tool to accurately determine oxygen dynamics (and thereby calculate carbon mineralization rates) in oligotrophic sediments. However, oxygen optodes as used in this study do not resolve the diffusive boundary layer (DBL). The data show that deep penetrating O₂ optodes in combination with high-resolution O₂ microelectrodes give a complete picture of the oxygen dynamics, including the DBL, in deep sea sediments.     

Organic matter budget in the Southeast Atlantic continental margin close to the Congo Canyon: In situ measurements of sediment oxygen consumption

A study of organic carbon mineralization from the Congo continental shelf to the abyssal plain through the Congo submarine channel and Angola Margin was undertaken using in situ measurements of sediment oxygen demand as a tracer of benthic carbon recycling. Two measurement techniques were coupled on a single autonomous platform: in situ benthic chambers and microelectrodes, which provided total and diffusive oxygen uptake as well as oxygen microdistributions in porewaters. In addition, sediment trap fluxes, sediment composition (Org-C, Tot-N, CaCO₃, porosity) and radionuclide profiles provided measurements of, respectively input fluxes and burial rate of organic and inorganic compounds.The in situ results show that the oxygen consumption on this margin close to the Congo River is high with values of total oxygen uptake (TOU) of 4±0.6, 3.6±0.5 mmol m⁻² d⁻¹ at 1300 and 3100 m depth, respectively, and between 1.9±0.3 and 2.4±0.2 mmol m⁻² d⁻¹ at 4000 m depth. Diffusive oxygen uptakes (DOU) were 2.8±1.1, 2.3±0.8, 0.8±0.3 and 1.2±0.1 mmol m⁻² d⁻¹, respectively at the same depths. The magnitude of the oxygen demands on the slope is correlated with water depth but is not correlated with the proximity of the submarine channel–levee system, which indicates that cross-slope transport processes are active over the entire margin. Comparison of the vertical flux of organic carbon with its mineralization and burial reveal that this lateral input is very important since the sum of recycling and burial in the sediments is 5–8 times larger than the vertical flux recorded in traps.Transfer of material from the Congo River occurs through turbidity currents channelled in the Congo valley, which are subsequently deposited in the Lobe zone in the Congo fan below 4800 m. Ship board measurements of oxygen profiles indicate large mineralization rates of organic carbon in this zone, which agrees with the high organic carbon content (3%) and the large sedimentation rate (19 mm y⁻¹) found on this site. The Lobe region could receive as high as 19 mol C m⁻² y⁻¹, 1/3 being mineralized and 2/3 being buried and could constitute the largest depocenter of organic carbon in the South Atlantic.     

The metabolic balance between autotrophy and heterotrophy in the western Arctic Ocean

The goal of this study was to explore how net community production (NCP) is influenced by the relationship between primary production and community respiration in the western Arctic Ocean. Plankton NCP and respiration were determined by measuring changes in oxygen in light and dark bottle incubations, respectively. Rates of NCP averaged over shelf, slope and basin waters were positive in summer 2002 (57±191 mmol O₂ m⁻² d⁻¹) and spring 2004 (85±86 mmol O₂ m⁻² d⁻¹) and negative in summer 2004 (−25±176 mmol O₂ m⁻² d⁻¹). Determinations of NCP obtained from bottle incubations were similar to rates inferred from in situ changes in dissolved inorganic carbon. An examination of the spatial variability of primary production and community respiration indicated that respiration is distributed more uniformly than primary production. A spatial offset between photosynthesis and respiration from the shelf to the Arctic basin was present in spring 2004, but was not seen at other times. NCP and the potential for export appear to be dependent on an uncoupling of primary production and community respiration. NCP continued into the summer after the stock of NO₃⁻ had been depleted. Our data suggest that the uniform distribution of respiration relative to primary production is an important factor influencing NCP and the potential for export in the western Arctic.     

Seasonal and spatial variability in plankton production and respiration in the Subtropical Gyres of the Atlantic Ocean

Euphotic zone plankton production (P) and respiration (R) were determined from the in vitro flux of dissolved oxygen during six latitudinal transects of the Atlantic Ocean, as part of the Atlantic Meridional Transect (AMT) programme. The transects traversed the North and South Atlantic Subtropical Gyres (N gyre, 18–38°N; S gyre, 11–35°S) in April–June and September–November 2003–2005. The route and timing of the cruises enabled the assessment of the seasonal variability of P, R and P/R in the N and S gyres, and the comparison of the previously unsampled N gyre centre with the more frequently sampled eastern edge of the gyre. Mean euphotic zone integrated rates (±SE) were P=63±23 (n=31), R=69±22 (n=30) mmol O₂ m⁻² d⁻¹ in the N gyre; and P=58±26 (n=30), R=62±24 (n=30) mmol O₂ m⁻² d⁻¹ in the S gyre. Overall, the N gyre was heterotrophic (R>P) and it was more heterotrophic than the S gyre, but the metabolic balance of both gyres changed with season. Both gyres were net heterotrophic in autumn, and balanced in spring. This seasonal contrast was most pronounced for the S gyre, because it was more autotrophic than the N gyre during spring. This may have arisen from differences in nitrate availability, because spring sampling in the S gyre coincided with periods of deep mixing to the nitracline, more frequently than spring sampling within the N gyre. Our results indicate that the N gyre is less heterotrophic than previous estimates suggested, and that there is an apparent decrease in R from the eastern edge to the centre of the N gyre, possibly indicative of an allochthonous organic carbon source to the east of the gyre.     

Organic carbon flux and remineralization in surface sediments from the northern North Atlantic derived from pore-water oxygen microprofiles

Organic carbon fluxes through the sediment/water interface in the high-latitude North Atlantic were calculated from oxygen microprofiles. A wire-operated in situ oxygen bottom profiler was deployed, and oxygen profiles were also measured onboard (ex situ). Diffusive oxygen fluxes, obtained by fitting exponential functions to the oxygen profiles, were translated into organic carbon fluxes and organic carbon degradation rates. The mean C_org input to the abyssal plain sediments of the Norwegian and Greenland Seas was found to be 1.9 mg C m⁻² d⁻¹. Typical values at the seasonally ice-covered East Greenland continental margin are between 1.3 and 10.9 mg C m⁻² d⁻¹ (mean 3.7 mg C m⁻² d⁻¹), whereas fluxes on the East Greenland shelf are considerably higher, 9.1–22.5 mg C m⁻² d⁻¹. On the Norwegian continental slope C_org fluxes of 3.3–13.9 mg C m⁻² d⁻¹ (mean 6.5 mg C m⁻² d⁻¹) were found. Fluxes are considerably higher here compared to stations on the East Greenland slope at similar water depths. By repeated occupation of three sites off southern Norway in 1997 the temporal variability of diffusive O₂ fluxes was found to be quite low. The seasonal signal of primary and export production from the upper water column appears to be strongly damped at the seafloor. Degradation rates of 0.004–1.1 mg C cm⁻³ a⁻¹ at the sediment surface were calculated from the oxygen profiles. First-order degradation constants, obtained from C_org degradation rates and sediment organic carbon content, are in the range 0.03–0.6 a⁻¹. Thus, the corresponding mean lifetime of organic carbon lies between 1.7 and 33.2 years, which also suggests that seasonal variations in C_org flux are small. The data presented here characterize the Norwegian and Greenland Seas as oligotrophic and relatively low organic carbon deep-sea environments.     

Diapycnal nutrient fluxes on the northern boundary of Cape Ghir upwelling region

In this study we estimate diffusive nutrient fluxes in the northern region of Cape Ghir upwelling system (Northwest Africa) during autumn 2010. The contribution of two co-existing vertical mixing processes (turbulence and salt fingers) is estimated through micro- and fine-structure scale observations. The boundary between coastal upwelling and open ocean waters becomes apparent when nitrate is used as a tracer. Below the mixed layer (56.15±15.56 m), the water column is favorable to the occurrence of a salt finger regime. Vertical eddy diffusivity for salt (K_s) at the reference layer (57.86±8.51 m, CI 95%) was 3×10⁻⁵ (±1.89×10⁻⁹, CI 95%) m² s⁻¹. Average diapycnal fluxes indicate that there was a deficit in phosphate supply to the surface layer (6.61×10⁻⁴ mmol m⁻² d⁻¹), while these fluxes were 0.09 and 0.03 mmol m⁻² d⁻¹ for nitrate and silicate, respectively. There is a need to conduct more studies to obtain accurate estimations of vertical eddy diffusivity and nutrient supply in complex transitional zones, like Cape Ghir. This will provide us with information about salt and nutrients exchange in onshore–offshore zones.     

Primary productivity,differential size fraction and pigment composition responses in two Southern Ocean in situ iron enrichments

Two in situ iron-enrichment experiments were conducted in the Pacific sector of the Southern Ocean during summer 2002 (SOFeX). The “north patch,” established within the Subantarctic Zone (∼56°S), was characterized by high nitrate (∼21 mmol m⁻³) but low silicic acid (2 mmol m⁻³) concentrations. North patch iron enrichment increased chlorophyll (Chl) by 12-fold to 2.1 mg m⁻³ and primary productivity (PP_EU) by 8-fold to 188 mmol C m⁻² d⁻¹. Surprisingly, despite low silicic acid concentrations, diagnostic pigment and size-fraction composition changes indicated an assemblage shift from prymnesiophytes toward diatoms. The “south patch,” poleward of the Southern Boundary of the Antarctic Circumpolar Current (SBACC) (∼66°S), had high concentrations of nitrate (∼27 mmol m⁻³) and silicic acid (64 mmol m⁻³). South patch iron enrichment increased Chl by 9-fold to 3.8 mg m⁻³ and PP_EU 5-fold to 161 mmol C m⁻² d⁻¹ but, notably, did not alter the phytoplankton assemblage from the initial composition of ∼50% diatoms. South patch iron addition also reduced total particulate organic carbon:Chl from ∼300 to 100; enhanced the presence of novel non-photosynthetic, but fluorescent, compounds; and counteracted a decrease in photosynthetic performance as photoperiod decreased. These experiments show unambiguously that in the contemporary, high nitrate Southern Ocean increasing iron supply increases primary productivity, confirming the initial premise of the Martin Iron Hypothesis. However, despite a 5-fold increase in PP_EU under iron-replete conditions in late summer, the effect of iron on annual productivity in the Southern Ocean poleward of the SBACC is limited by seasonal ice coverage and the dark of polar winter.     

Sulfate reduction in Black Sea sediments: in situ and laboratory radiotracer measurements from the shelf to 2000 m depth

Sulfate reduction rate measurements by the ³⁵SO₄²⁻ core injection method were carried out in situ with a benthic lander, LUISE, and in parallel by shipboard incubations in sediments of the Black Sea. Eight stations were studied along a transect from the Romanian shelf to the deep western anoxic basin. The highest rates measured on an areal basis for the upper 0–15 cm were 1.97 mmol m⁻² d⁻¹ on the shelf and 1.54 mmol m⁻² d⁻¹ at 181 m water depth just below the chemocline. At all stations sulfate reduction rates decreased to values <3 nmol cm⁻³ d⁻¹ below 15 cm depth in the sediment. The importance of sulfate reduction relative to the total mineralization of organic matter was very low, 6%, on the inner shelf, which was paved with mussels, and increased to 47% on the outer shelf at 100 m depth. Where the oxic–anoxic interface of the water column impinged on the sea floor at around 150 m depth, the contribution of sulfate reduction increased from >50% just above the chemocline to 100% just below. In the deep sea, mean sulfate reduction rates were 0.6 mmol m⁻² d⁻¹ corresponding to an organic carbon oxidation of 1.3 mmol m⁻² d⁻¹. This is close to the mean sedimentation rate of organic carbon over the year in the western basin. A comparison with published data on sulfate reduction in Black Sea sediments showed that the present results tend to be higher in shelf sediments and lower in the deep-sea than most other data. Based on the present water column H₂S inventory and the H₂S flux out of the sediment, the calculated turnover time of H₂S below the chemocline is 2100 years.     

Diatom biomass and productivity in oceanic and plume-influenced waters of the western tropical Atlantic ocean

Whereas diatoms (class Bacillariophyceae) often dominate phytoplankton taxa in the Amazon estuary and shelf, their contribution to phytoplankton dynamics and impacts on regional biogeochemistry are poorly understood further offshore in the western tropical Atlantic Ocean (WTAO). Thus, relative contribution of diatoms to phytoplankton biomass and primary production rates and associated environmental conditions were quantified during three month-long cruises in January–February 2001, July–August 2001, and April–May 2003. The upper water column was sampled at 6 light depths (100%, 50%, 25%, 10%, 1% and 0.1% of surface irradiance) at 64 stations between 3° and 14°N latitude and 41° and 58°W longitude. Each station was categorized as ‘oceanic’ or ‘plumewater’, based on principal component analysis of eight physical, chemical and biological variables. All stations were within the North Brazil Current, and plumewater stations were characterized by shallower mixed layers with lower surface salinities and higher dissolved silicon (dSi) concentrations than oceanic stations. The major finding was a much greater role of diatoms in phytoplankton biomass and productivity at plumewater stations relative to oceanic stations. Mean depth-integrated bSi concentrations at the plumewater and oceanic stations were 14.2 and 3.7 mmol m⁻², respectively. Mean depth-integrated SiP rates at the plumewater and oceanic stations were 0.17 and 0.02 mmol m⁻² h⁻¹, respectively. Based on ratios of SiP and PP rates, and typical Si:C ratios, diatoms contributed on average 29% of primary productivity at plumewater stations and only 3% of primary productivity at oceanic stations. In contrast, phytoplankton biomass (as chlorophyll a concentrations) and primary production (PP) rates (as ¹⁴C uptake rates) integrated over the euphotic zone were not significantly different at plumewater and oceanic stations. Chlorophyll a concentrations ranged from 8.5 to 42.4 mg m⁻² and 4.0 to 38.0 mg m⁻² and PP rates ranged from 2.2 to 11.2 mmol m⁻² h⁻² and 1.8 to 10.8 mmol m⁻² h⁻² at plumewater and oceanic stations, respectively. A conservative estimate of annual integrated SiP in offshore waters of Amazon plume between April and August is 0.59 Tmol Si, based on mean SiP rates in plumewaters and satellite-derived estimates of the area of the Amazon plume. In conclusion, river plumewaters dramatically alter the silicon dynamics of the WTAO, forming extensive diatom-dominated phytoplankton blooms that may contribute significantly to the global Si budget as well as contributing to energy and matter flow off of the continental shelf.     

Plankton net community production and dark respiration in the Arabian Sea during September 1994

Plankton community net and gross production and dark respiration were determined from in vitro changes in dissolved inorganic carbon and dissolved oxygen during September 1994 along a southeast offshore transect in the Arabian Sea. Surface rates of gross production decreased from 17±0.7 mmol C m^-3 d^-1 at a coastal upwelling station to 3±0.8 mmol C m^-3 d^-1 at the most offshore station. The euphotic zone at the time of sampling was predominantly heterotrophic, with integrated net community production values ranging from 15±7 mmol C m^-2 d^-1 inshore to −253±32 mmol C m^-2 d^-1 offshore. Calculations of the respiration attributable to the major plankton groups could account for 61–87% of the dark community respiration measured at the inshore stations, but only 15–26% of the community respiration determined offshore. Comparison of the fluxes of dissolved inorganic carbon and oxygen revealed a tendency for higher respiratory quotients than those calculated for organic metabolism prevailing at the offshore stations.     

Dissolved inorganic carbon,alkalinity, nutrient and oxygen seasonal and interannual variations at the Antarctic Ocean JGOFS-KERFIX site

JGOFS-KERFIX (KERguelen point FIXe) time-series station, located south of the polar front in the Indian sector of the Antarctic Ocean, was occupied monthly between January 1990 and March 1995. Annual cycles of dissolved inorganic carbon (DIC), total alkalinity (TALK), oxygen (O₂) and nutrients (nitrate, silicate, phosphate and ammonia) in the upper ocean are presented for this site. From seasonal drawdown of nutrients and DIC, we estimate a spring–summer net community production of 3.2±0.5 mol m⁻² and C/N/P ratios of 100/16/1. The Si/N ratio varies between 1.8 and 3, suggesting low iron concentrations. The spring–summer biogenic silicon export derived from silicate drawdown is 1.18 mol m⁻², consistent with model estimates of silicate export at this site. Seasonal and interannual variations of oxygen, nitrate and DIC due to physical and biological processes are quantified using a simple month-to-month budget formulation. From these budgets, an annual net community production of 5.7±3.3 mol m⁻² yr⁻¹ is estimated, about twice the averaged spring–summer production, indicating that, at KERFIX, there is a positive net community production throughout the year. Air–sea CO₂ fluxes show that KERFIX is a strong CO₂ sink for the atmosphere of 2.4–5.1 mol m⁻² yr⁻¹ in 1993, depending on the gas exchange formulation used. A 2.1–3.3 mol m⁻² yr⁻¹ outgassing of O₂ is observed at KERFIX except in 1993 and 1994 where a decreasing trend of temperature induces an increase of O₂ solubility.     

Community respiration/production and bacterial activity in the upper water column of the central Arctic Ocean

Community metabolism (respiration and production) and bacterial activity were assessed in the upper water column of the central Arctic Ocean during the SHEBA/JOIS ice camp experiment, October 1997–September 1998. In the upper 50 m, decrease in integrated dissolved oxygen (DO) stocks over a period of 124 d in mid-winter suggested a respiration rate of ∼3.3 nM O₂ h⁻¹ and a carbon demand of ∼4.5 gC m⁻². Increase in 0–50 m integrated stocks of DO during summer implied a net community production of ∼20 gC m⁻². Community respiration rates were directly measured via rate of decrease in DO in whole seawater during 72-h dark incubation experiments. Incubation-based respiration rates were on average 3-fold lower during winter (11.0±10.6 nM O₂ h⁻¹) compared to summer (35.3±24.8 nM O₂ h⁻¹). Bacterial heterotrophic activity responded strongly, without noticeable lag, to phytoplankton growth. Rate of leucine incorporation by bacteria (a proxy for protein synthesis and cell growth) increased ∼10-fold, and the cell-specific rate of leucine incorporation ∼5-fold, from winter to summer. Rates of production of bacterial biomass in the upper 50 m were, however, low compared to other oceanic regions, averaging 0.52±0.47 ngC l⁻¹ h⁻¹ during winter and 5.1±3.1 ngC l⁻¹ h⁻¹ during summer. Total carbon demand based on respiration experiments averaged 2.4±2.3 mgC m⁻³ d⁻¹ in winter and 7.8±5.5 mgC m⁻³ d⁻¹ in summer. Estimated bacterial carbon demand based on bacterial productivity and an assumed 10% gross growth efficiency was much lower, averaging about 0.12±0.12 mgC m⁻³ d⁻¹ in winter and 1.3±0.7 mgC m⁻³ d⁻¹ in summer. Our estimates of bacterial activity during summer were an order of magnitude less than rates reported from a summer 1994 study in the central Arctic Ocean, implying significant inter-annual variability of microbial processes in this region.     

Phytoplankton growth and mortality during the 1995 Northeast Monsoon and Spring Intermonsoon in the Arabian Sea

Phytoplankton growth rates and mortality rates were experimentally examined at eight stations in the Arabian Sea along the U.S. JGOFS cruise track during the 1995 Northeast Monsoon (January) and Spring Intermonsoon (March–April). Instantaneous growth rates averaged over an entire cruise were approximately twice as high during the NE Monsoon than during the Spring Intermonsoon period (overall averages of 0.84±0.29 (s.d.) versus 0.44±0.19 d⁻¹). Average herbivore grazing (mortality) rates, however, were quite similar for the two seasons (overall averages of 0.35±0.18 and 0.30±0.17 d⁻¹ for the NE Monsoon and Spring Intermonsoon, respectively). The absolute amounts of phytoplankton biomass consumed during each season also were similar (29 and 25% of standing stock consumed d⁻¹ for the January and March–April cruises, respectively), as were the geographical trends of this removal. These seasonal trends in growth and removal rates resulted in net phytoplankton growth rates that were considerably higher during the January cruise (0.48 d⁻¹) than during the March–April cruise (0.14 d⁻¹). That is, phytoplankton production was more closely balanced during the Spring Intermonsoon season (87% of daily primary production consumed) relative to the NE Monsoon season (49% of daily primary production consumed). Station-to-station variability was high for rate measurements during either cruise. Nevertheless, there was a clear onshore–offshore trend in the absolute rate of removal of phytoplankton biomass (μg chlorophyll consumed l⁻¹ d⁻¹) during both cruises. Coastal stations had removal rates that were typically 2–4 times higher than removal rates at oceanic stations.     

Particulate organic carbon export fluxes and size-fractionated POC/234Th ratios in the Ligurian,Tyrrhenian and Aegean Seas

Measurements of ²³⁴Th/²³⁸U disequilibria and particle size-fractionated (1, 10, 20, 53, 70, 100 μm) organic C and ²³⁴Th were made to constrain estimates of the export flux of particulate organic C (POC) from the surface waters of the Ligurian, Tyrrhenian and Aegean Seas in March–June 2004. POC exported from the surface waters (75–100 m depth) averaged 9.2 mmol m⁻² d⁻¹ in the Ligurian and Tyrrhenian Seas (2.3±0.5–14.9±3.0 mmol m⁻² d⁻¹) and 0.9 mmol m⁻² d⁻¹ in the Aegean Sea. These results are comparable to previous measurements of ²³⁴Th-derived and sediment-trap POC fluxes from the upper 200 m in the Mediterranean Sea. Depth variations in the POC/²³⁴Th ratio suggest two possible controls. First, decreasing POC/²³⁴Th ratios with depth were attributed to preferential remineralization of organic C. Second, the occurrence of maxima or minima in the POC/²³⁴Th ratio near the DCM suggests influence by phytoplankton dynamics. To assess the accuracy of these data, the empirical ²³⁴Th-method was evaluated by quantifying the extent to which the ²³⁴Th-based estimate of POC flux, P_POC, deviates from the true flux, F_POC, defined as the p-ratio (p-ratio=P_POC/F_POC=S_Th/S_POC, where S=particle sinking rate). Estimates of the p-ratio made using Stokes’ Law and the particle size distributions of organic C and ²³⁴Th yield values ranging from 0.93–1.45. The proximity of the p-ratio to unity implies that differences in the sinking rates of POC- and ²³⁴Th-carrying particles did not bias ²³⁴Th-normalized POC fluxes by more than a factor of two.     

Seasonal and spatial patterns of sedimentary denitrification rates in the Chukchi sea

Recent constructions of the global nitrogen budget estimate that at least half of the ocean's fixed nitrogen is lost by sedimentary denitrification, the majority of which occurs in continental shelves. The Arctic contains approximately 20% of the world's continental shelf, suggesting it is a substantial contributor to the global sedimentary denitrification rate. During two cruises in the summer and spring of 2002 and 2004, respectively, denitrification rates were calculated from the downward diffusive flux of nitrate in the shelf and slope sediments of the Chukchi Sea in the western Arctic. Additionally, in the spring of 2004, denitrification rates were determined by whole-core incubations in which the flux of nitrogen gas out of the sediments was measured. Measurements were made along three transects crossing the shelf and slope (50–3000 m), each transect having different overlying water characteristics. Denitrification rates generally decreased with increasing water depth: rates varied from about 1.6 mmol N m⁻² d⁻¹ for the shallow-water sediments to undetectable in deep-water sediments. Rates showed little variation between the two seasons. However, rates were found to correspond with differences in annual overlying primary productivities and particulate organic carbon export fluxes. An extrapolation to the whole Arctic yielded an average Arctic sedimentary denitrification rate of 13 Tg N yr⁻¹. Taken in the context of the global nitrogen budget, it is about 4–13% of the total sink of fixed nitrogen in the ocean.     

Oxygen dynamics in the North Atlantic subtropical gyre

Dissolved oxygen (DO) in the ocean is a tracer for most ocean biogeochemical processes including net community production and remineralization of organic matter which in turn constrains the biological carbon pump. Knowledge of oxygen dynamics in the North Atlantic Ocean is mainly derived from observations at the Bermuda Atlantic Time-series Study (BATS) site located in the western subtropical gyre which may skew our view of the biogeochemistry of the subtropical North Atlantic. This study presents and compares a 15 yr record of DO observations from ESTOC (European Station for Time-Series in the Ocean, Canary Islands) in the eastern subtropical North Atlantic with the 20 yr record at BATS. Our estimate for net community production of oxygen was 2.3±0.4 mol O₂ m⁻² yr⁻¹ and of oxygen consumption was −2.3±0.5 mol O₂ m⁻² yr⁻¹ at ESTOC, and 4 mol O₂ m⁻² yr⁻¹ and −4.4±1 mol m⁻² yr⁻¹ at BATS, respectively. These values were determined by analyzing the time-series using the Discrete Wavelet Transform (DWT) method. These flux values agree with similar estimates from in-situ observational studies but are higher than those from modeling studies. The difference in net oxygen production rates supports previous observations of a lower carbon export in the eastern compared to the western subtropical Atlantic. The inter-annual analysis showed clear annual cycles at BATS whereas longer cycles of nearly 4 years were apparent at ESTOC. The DWT analysis showed trends in DO anomalies dominated by long-term perturbations at a basin scale for the consumption zones at both sites, whereas yearly cycles dominated the production zone at BATS. The long-term perturbations found are likely associated with ventilation of the main thermocline, affecting the consumption and production zones at ESTOC.     

Dry atmospheric deposition and diazotrophy as sources of new nitrogen to northwestern Mediterranean oligotrophic surface waters

Atmospheric dry deposition of nitrogen (N) and dinitrogen (N₂) fixation rates were assessed in 2004 at the time-series DYFAMED station (northwestern Mediterranean, 43°25′N, 7°52′E). The atmospheric input was monitored over the whole year. Dinitrogen fixation was measured during different seasonal trophic states (from mesotrophy to oligotrophy) sampled during nine cruises. The bioavailability of atmospherically deposited nutrients was estimated by apparent solubility after 96 h. The solubility of dry atmospheric N deposition was highly variable (from ∼18% to more than 96% of total N). New N supplied to surface waters by the dry atmospheric deposition was mainly nitrate (NO₃⁻) (∼57% of total N, compared to ∼6% released as ammonium (NH₄⁺)). The mean bioavailable dry flux of total N was estimated to be ∼112 μmol m⁻² d⁻¹ over the whole year. The NO₃⁻ contribution (70 μmol NO₃⁻ m⁻² d⁻¹) was much higher than the NH₄⁺ contribution (1.2 μmol NH₄⁺ m⁻² d⁻¹). The N:P ratios in the bioavailable fraction of atmospheric inputs (122.5–1340) were always much higher than the Redfield N:P ratio (16). Insoluble N in atmospheric dry deposition (referred to as “organic” and believed to be strongly related to anthropogenic emissions) was ∼40 μmol m⁻² d⁻¹. N₂ fixation rates ranged from 2 to 7.5 nmol L⁻¹ d⁻¹. The highest values were found in August, during the oligotrophic period (7.5 nmol L⁻¹ at 10 m depth), and in April, during the productive period (4 nmol L⁻¹ d⁻¹ at 10 m depth). Daily integrated values of N₂ fixation ranged from 22 to 100 μmol N m⁻² d⁻¹, with a maximum of 245 μmol N m⁻² d⁻¹ in August. No relationship was found between the availability of phosphorus or iron and the observed temporal variability of N₂ fixation rates. The atmospheric dry deposition and N₂ fixation represented 0.5–6% and 1–20% of the total biological nitrogen demand, respectively. Their contribution to new production was more significant: 1–28% and 2–55% for atmospheric dry deposition and N₂ fixation, respectively. The dry atmospheric input was particularly significant in conditions of water column stratification (16–28% of new production), while N₂ fixation reached its highest values in June (46% of new production) and in August (55%).     

Silicon flux and distribution of biogenic silica in deep-sea sediments in the western North Pacific Ocean

We investigated biogenic silica, several biological components, and silicate in pore-water in the abyssal sediment to determine silicon flux of western North Pacific during several cruises. The surficial sediment biogenic silica content was high at high latitudes with the boundary running along the Kuroshio Extension, and maximum values (exceeding 20%) were found in the Oyashio region. In the subtropical region to the south, most stations showed less than 5% biogenic silica content. This distribution pattern reflected primary production and ocean currents in the surface layer very well. Pore-water samples were collected from 4 stations along the east coast of Japan. The highest asymptotic silicic acid concentration (670 μmol L^?1) in pore-water was observed at the junction of Kuroshio and Oyashio, followed by samples from the Oyashio region. It is at the southern station that the lowest value (450 μmol L^?1) was observed, and the primary production is low under the influence of Kuroshio there. The diffusive flux followed the same geographic trend as the asymptotic silicic acid concentrations did, ranging 77–389 mmol m^?2 yr ^?1. Multiple sampling of pore-water was conducted throughout the year at one station at high latitude. The average annual biogenic silica rain flux observed using sediment traps was 373 mmol m^?2 yr^?1; the diffusive flux and burial flux at the sediment–water interface were 305 and 9 mmol m^?2 yr^?1, respectively. We concluded that most of the settling silica particles dissolved and diffused at the sediment–water interface and approximately 3% only were preserved in this area. In addition, the obvious time lag observed between the peak rain flux and the maximum diffusive flux suggested that primary production in the surface layer has a great influence on the sedimentation environment of abyssal western North Pacific. These transitions of Si flux at the sediment–water interface were considerably greater in northwestern North Pacific than in southwestern North Pacific. In addition, a station in the Philippine Sea indicated high biogenic silica content because of Ethmodiscus ooze, which are scattered randomly on the sea floor in the subtropical region.     

The supply of nutrients due to vertical turbulent mixing: A study at the Porcupine Abyssal Plain study site in the northeast Atlantic

As part of a multidisciplinary cruise to the Porcupine Abyssal Plain (PAP) study site (49°00′N 16°30′W), in June and July 2006, observations were made of the vertical nitrate flux due to turbulent mixing. Daily profiles of nitrate and turbulent mixing, at the central PAP site, give a mean nitrate flux into the euphotic zone of 0.09 (95% confidence intervals: 0.05–0.16) mmol N m⁻² d⁻¹. This is a factor of 50 lower than the mean observed rate of nitrate uptake within the euphotic zone (5.1±1.3 mmol N m⁻² d⁻¹). By using our direct observations to ‘validate’ a previously published parameterisation for turbulent mixing, we further quantify the variability in the vertical turbulent flux across a roughly 100×100 km region centred on the PAP site, using hydrographic data. The flux is uniformly low (0.08±0.26 mmol N m⁻² d⁻¹, the large standard deviation being due to a strongly non-Gaussian distribution) and is consistent with direct measurements at the central site. It is demonstrated that on an annual basis convective mixing supplies at least 40-fold more nitrate to the euphotic zone than turbulent mixing at this location. Other processes, such as those related with mesoscale phenomena, may also contribute significantly.     

The relative contributions of unicellular and filamentous diazotrophs to N2 fixation in the South China Sea and the upstream Kuroshio

We studied the seasonal, diel, and vertical distribution of phytoplankton N₂ fixation to understand the relative contributions of unicellular and filamentous nitrogen fixers (diazotrophs) to N₂ fixation and nitrogen recycling in the northern South China Sea (SCS) and the neighboring upstream Kuroshio. N₂-fixation rates were measured by the ¹⁵N₂ tracer technique (addition by bubble) on unicellular (<10 or 20 µm) and the filamentous diazotrophs (>10 or 20 µm, mostly Trichodesmium and Richelia) fractionated by 10- or 20-µm mesh sizes. The mean depth-integrated total (unicellular+filamentous) N₂-fixation rates in the SCS (51.7±6.2 µmol N m⁻² d⁻¹) averaged 1/3 of that in the Kuroshio (142.7±29.6 µmol N m⁻² d⁻¹), with higher rates in the winter than in other seasons in the SCS and the opposite seasonal pattern in the Kuroshio. Unicellular diazotrophs contributed 65% of the total N₂ fixation in the SCS, which were negatively correlated with surface temperature and, as for total N₂ fixation, were higher in the winter when Trichodesmium spp. were scarce. In comparison, the unicellular diazotrophs contributed 50% of total N₂ fixation in the Kuroshio, and their contributions were not significantly correlated with surface temperature. In both the SCS and the Kuroshio, the unicellular N₂ fixation was more important during the night than during the day, and in the deep euphotic layer than in the surface layer, even in the daytime. Our results show that the unicellular diazotrophs were important N₂ fixers and contributed significantly to N₂ fixation in the tropical marginal seas, more so in the SCS than the Kuroshio.