In situ experimental decomposition studies in estuaries: A comparison of Phragmites australis and Fucus vesiculosus

The decomposition rates of Phragmites australis and Fucus vesiculosus were experimentally determined in an estuarine system using the leaf-bag technique. The study was conducted in fifteen sites arranged in five areas, extending from freshwater, outside the tidal range, to the marine environment, near the mouth of the estuary. The leaf-bags (5 mm mesh), were set up with 3.0 g of dried substrate, submerged in the experimental sites at day 0 and collected at days 3, 7, 15, 30 and 60, to follow biomass loss. The biomass loss through the leaching phase (day 3) was about 16% for Phragmites australis and 33% for Fucus vesiculosus and was independent of salinity for both substrates. The difference in the remaining biomass between the two species increased with time and the decomposition rates differed along the salinity gradient. For F. vesiculosus, the decomposition rate was highest near the mouth of the estuary, corresponding to the preferential distribution area of the algae, and decreased towards freshwater. For Phragmites australis, the fastest decay was observed in the mid estuary, where Phragmites australis occurs naturally, confirming previous studies. The decomposition rates measured at different time intervals (0–15, 0–30 and 0–60 days) were always higher for the algae and decreased with time for both species. These results indicate that the use of decomposition rates as a measure of ecosystem integrity or quality status in transitional waters will not be straightforward and must take into account, among others, the test species, the study area positioning along the estuarine gradient, and the time interval for the calculation of the decomposition rate.     

Litterfall dynamics and nutrient decomposition of arid mangroves in the Gulf of California: Their role sustaining ecosystem heterotrophy

This study shows results on litterfall dynamics and decay in mangrove stands of Avicennia germinans distributed along a latitudinal gradient (three forest sites) in the Gulf of California, in order to assess whether internal sources could support the observed mangrove ecosystem organic deficit in this arid tropic. Total mean annual litterfall production increased southward (712.6 ± 53.3, 1501.3 ± 145.1 and 1506.2 ± 280.5 g DW m⁻² y⁻¹, in the Yaqui, Mayo and Fuerte areas respectively), leaves being the main component of litter in all locations during the entire year, followed by fruits. The wet season (June–September) showed the highest litterfall rates through fruits. The temporal trend of litterfall production was significantly explained through mean air temperature (R² = 68%) whilst total annual litter production in the entire region showed a statistically significant relationship with total soil phosphorus, salinity, total nitrogen, organic matter and tree height (R² = 0.67). Throughout 117 days of the decomposition experiment, the litter lost 50% of its original dry weight in 5.8 days (average decay rate of 0.032 ± 0.04 g DW d⁻¹) and there were not significant differences in the remaining mass after 6 days. The percentage of both C and P released from the litter correlated significantly with the ratio of tidal inundated days to total experiment days (R² = 0.62, p = 0.03 and R² = 0.67, p = 0.02, respectively); however, the frequency of tidal inundation only showed a significant increase in C release from Avicennia litter after 6 and above 48 days of decomposition. Whereas the total C content of litter bags decreased linearly over the decomposition to (% Total C = 5.52 − 0.46 days, R² = 0.81, p = 0.0005), N content displayed an irregular pattern with a significant increase of decay between 48 and 76 days from the beginning of the experiment. The pattern for relative P content of litter revealed reductions of up to 99% of the original (%tot-P = −9.77 to 1.004 days, R² = 0.72, p = 0.01) although most of the P reduction occurred between 17 and 34 days after the experiment started. Soil N and P contents, which exhibited significant differences in the course of the decomposition experiment, appeared to show significant differences between sampling sites, although they were not related to tidal influence, nor by leaf and nutrient leaching. In a global basis, C/N litter ratios decreased linearly (C/N = 32.86 − 0.1006 days, R² = 0.62, p = 0.02), showing a strong and significant correlation with meteorological variables (R² = 0.99, p = 0.01). C/P ratios of litter increased through an exponential function (C/P = 119.35e^0.04day, R² = 0.89, p < 0.001). Changes in the remaining percentage of litter mass during the experiment were significantly correlated with soil C/N ratio (R² = 0.56, p = 0.03) as well as with the soil C/P ratio (R² = 0.98, p < 0.001). Our results of litter decomposition dynamics in this mangrove support the fact of null net primary productivity of the arid mangrove wetlands: fast litter decomposition compensates the ecosystem organic deficit in order to sustain the mangrove productivity. Litter decomposition plays a key role in the ecosystem metabolism in mangroves of arid tropics.     

Response of early Ruppia cirrhosa litter breakdown to nutrient addition in a coastal lagoon affected by agricultural runoff

The response of early Ruppia cirrhosa Petagna (Grande) litter decomposition to external nitrogen and phosphorus availability in La Tancada (Ebro River, NE Spain), a coastal lagoon that receives agricultural freshwater runoff from rice fields has been examined. Recently abscised dead R. cirrhosa stems were collected and 25 g of fresh weight was placed in litter bags with a mesh size of 100 μm and 1 mm. These bags were fertilised by adding nitrogen (N), a mixture of nitrogen plus phosphorus (N + P), or phosphorus (P), or were left untreated (CT). Macroinvertebrates were retrieved from the bags and the ash-free dry weight, and carbon, and N and P content of the remaining plant material were measured after 0, 3, 7, 14, 22 and 32 days. Litter decomposition rates, k (day⁻¹), were estimated using a simple exponential model. Litter decay was clearly accelerated by the addition of P in the fine (100 μm) litter bags (0.042), but when N was added alone (0.0099) the decomposition rate was lower than in the CT treatments (0.022). No significant difference was observed between the N (0.0099–0.018) and N + P (0.0091–0.015) treatments in either the fine or the coarse (1 mm) litter bags. These results could be attributed to the relatively high availability of external (environmental) and internal (detritus contents) N. No significant effect of macro invertebrates was observed in the CT treatment or under N or P or N + P addition. The ratio between the decomposition rates in coarse and fine litter bags (k_c/k_f) was lower in disturbed Tancada lagoon (0.82) than in Cesine lagoon (2.11), a similar Mediterranean coastal water body with almost pristine conditions. These results indicate that, in addition to data on macroinvertebrate community structure, decomposition rates could also be used to assess water quality in coastal lagoons.     

Pteropods in Southern Ocean ecosystems

To date, little research has been carried out on pelagic gastropod molluscs (pteropods) in Southern Ocean ecosystems. However, recent predictions are that, due to acidification resulting from a business as usual approach to CO₂ emissions (IS92a), Southern Ocean surface waters may begin to become uninhabitable for aragonite shelled thecosome pteropods by 2050. To gain insight into the potential impact that this would have on Southern Ocean ecosystems, we have here synthesized available data on pteropod distributions and densities, assessed current knowledge of pteropod ecology, and highlighted knowledge gaps and directions for future research on this zooplankton group.Six species of pteropod are typical of the Southern Ocean south of the Sub-Tropical Convergence, including the four Thecosomes Limacina helicina antarctica, Limacina retroversa australis, Clio pyramidata, and Clio piatkowskii, and two Gymnosomes Clione limacina antarctica and Spongiobranchaea australis. Limacina retroversa australis dominated pteropod densities north of the Polar Front (PF), averaging 60 ind m⁻³ (max = 800 ind m⁻³) and 11% of total zooplankton at the Prince Edward Islands. South of the PF L. helicina antarctica predominated, averaging 165 ind m⁻³ (max = 2681 ind m⁻³) and up to >35% of total zooplankton at South Georgia, and up to 1397 ind m⁻³ and 63% of total zooplankton in the Ross Sea. Combined pteropods contributed <5% to total zooplankton in the Lazarev Sea, but 15% (max = 93%) to macrozooplankton in the East Antarctic. In addition to regional density distributions we have synthesized data on vertical distributions, seasonal cycles, and inter-annual density variation.Trophically, gymnosome are specialist predators on thecosomes, while thecosomes are considered predominantly herbivorous, capturing food with a mucous web. The ingestion rates of L. retroversa australis are in the upper range for sub-Antarctic mesozooplankton (31.2-4196.9 ng pig ind⁻¹ d⁻¹), while those of L. helicina antarctica and C. pyramidata are in the upper range for all Southern Ocean zooplankton, in the latter species reaching 27,757 ng pig ind⁻¹ d⁻¹ and >40% of community grazing impact. Further research is required to quantify diet selectivity, the effect of phytoplankton composition on growth and reproductive success, and the role of carnivory in thecosomes.Life histories are a significant knowledge gap for Southern Ocean pteropods, a single study having been completed for L. retroversa australis, making population studies a priority for this group. Pteropods appear to be important in biogeochemical cycling, thecosome shells contributing >50% to carbonate flux in the deep ocean south of the PF. Pteropods may also contribute significantly to organic carbon flux through the production of fast sinking faecal pellets and mucous flocs, and rapid sinking of dead animals ballasted by their aragonite shells. Quantification of these contributions requires data on mucous web production rates, egestion rates, assimilation efficiencies, metabolic rates, and faecal pellet morphology for application to sediment trap studies.Based on the available data, pteropods are regionally significant components of the Southern Ocean pelagic ecosystem. However, there is an urgent need for focused research on this group in order to quantify how a decline in pteropod densities may impact on Southern Ocean ecosystems.     

Spatial variability of epifaunal communities from artificial habitat: Shipwrecks in the Southern Bight of the North Sea

We investigated the cover, community structure and abiotic environment of nine shipwrecks lying at increasing distance from the Belgian coast. Results indicated that all shipwrecks were strongly dominated by cnidarians in terms of biomass and by amphipods in terms of abundances. Based on their epifaunal composition, three groups of shipwrecks could be determined. Metridium senile dominated a species poor community of the coastal sites. On the same sites, a Tubularia larynx community with a more species-rich assemblage was also developing. The T. larynx community had a lower biomass value (102 g AFDW m⁻²) and significantly lower species richness compared to the other sites. The coastal sites were characterized by periodic salinity decreases, large seasonal temperature fluctuation, high total suspended matter load and reduced current velocity. Channel water masses influence the offshore sites causing a more stable temperature and salinity environment, less turbid waters and high current speed. Tubularia indivisa dominated this community, with an average biomass of 229 g AFDW m⁻². Intermediate sites were also dominated by T. indivisa, but a higher biomass (424 g AFDW m⁻²) was observed. They showed intermediate results for the abiotic parameters and fast current velocities. Hypotheses for the observed variation in community structures are discussed in the light of the abiotic characterization of the shipwrecks.     

Impacts of urban wastewater discharge on seagrass meadows (Zostera noltii)

The abiotic disturbance of urban wastewater discharge and its effects in the population structure, plant morphology, leaf nutrient content, epiphyte load and macroalgae abundance of Zostera noltii meadows were investigated in Ria Formosa coastal lagoon, southern Portugal using both univariate and multivariate analysis. Four sites were assessed, on a seasonal basis, along a gradient from a major Waste Water Treatment Works (WWTW) discharge to a main navigation channel. The wastewater discharge caused an evident environmental disturbance through the nutrient enrichment of the water and sediment, particularly of ammonium. Zostera noltii of the sites closest to the nutrient source showed higher leaf N content, clearly reflecting the nitrogen load. The anthropogenic nutrient enrichment resulted in higher biomass, and higher leaf and internode length, except for the meadow closest to the wastewater discharge (270 m). The high ammonium concentration (158–663 μM) in the water at this site resulted in the decrease of biomass, and both the leaf and internode length, suggesting a toxic effect on Z. noltii. The higher abundance of macroalgae and epiphytes found in the meadow closest to the nutrient source may also affect the species negatively. Shoot density was higher at the nutrient-undisturbed site. Two of the three abiotic processes revealed by Principal Component Analysis were clearly related to the WWTW discharge, a contrast between water column salinity and nutrient concentration and a sediment contrast between both porewater nutrients and temperature and redox potential. A multiple regression analysis showed that these abiotic processes had a significant effect on the biomass-density dynamics of meadows and on the overall size of Z. noltii plants, respectively. Results show that the wastewater discharge is an important source of environmental disturbance and nutrients availability in Ria Formosa lagoon affecting the population structure, morphology and N content of Z. noltii. This impact is spatially restricted to areas up to 600 m distant from the WWTW discharge, probably due to the high water renewal of the lagoon.     

The reproductive biology of a shallow water morid (Salilota australis Günther, 1878), around the Falkland Islands

The reproductive biology of a shelf morid, red cod (Salilota australis) was investigated in the Falkland Islands, in order to expand our knowledge of the reproductive strategy of this relatively unstudied family of fishes. Red cod spawn to the south and south-west of West Falkland between August and October. Length frequency and sex ratio data suggest that females arrive at the spawning grounds first. The greatest spawning activity occurred in early evening and this timing may be an adaptation to reduce predation on eggs. Ripe egg size varied from 0.95 to 1.26 mm and was not dependant on female size. There was no regulative atresia during maturation and the formation of fecundity and fecundity increased with increasing fish total length (L_T) from 300,000 (42-45 cm L_T) to 4.5-9.0 million eggs (75-83 cm L_T). The fecundity of most of the population was between 2 and 5 million eggs. Red cod releases small batches of eggs over the spawning period. Batch size ranged from 30,000-90,000 (39-42 cm L_T) in smaller animals to 400,000-800,000 (>75 cm L_T) in larger animals and the batch size of first spawners was significantly higher than for advanced spawners. The study allows us to discuss the evolutionary relationships between the Gadiformes.     

Close coupling between ammonium uptake by phytoplankton and excretion by Antarctic krill, Euphausia superba

In this study we examined the hypothesis that, under conditions of replete macronutrients and iron in the Southern Ocean, phytoplankton abundance and specific N uptake rates are influenced strongly by the processes of grazing and NH₄ regeneration. NH₄ and NO₃ uptake rates by marine phytoplankton were measured to the northeast and northwest of the island of South Georgia during January-February 1998. Mean specific uptake rate for NO₃ (vNO₃) was 0.0026 h⁻¹ (range 0.0013-0.0065 h⁻¹) and for NH₄ (vNH₄) was 0.0097 h⁻¹ (0.0014-0.0376 h⁻¹). vNH₄ was related positively with NH₄ availability, which ranged from 0.1 to 1.5 mmol m⁻³ within the upper mixed layer. Ambient NH₄ concentrations and vNH₄ were both positively related to local krill biomass values, computed from mean values along acoustic transect segments within 2 km of the uptake measurement stations. These biomass values ranged from ∼1 g krill fresh mass m⁻² in the northwest to >4 kg krill wet mass m⁻² in the northeast. In contrast to the variability found with NH₄ concentrations and uptake rates, vNO₃ was more uniform across the sampling sites. Under these conditions, increasing NH₄ concentration appeared to represent an additional N resource. However, high vNH₄ tended to be found for stations with lower phytoplankton standing stocks, across a total range of 0.24-20 mg chlorophyll a m⁻³. These patterns suggest a coupling between phytoplankton biomass, vNH₄ and krill in this region of variable but high krill biomass. Locally high concentrations of krill in parts of the study area appeared to have two opposing effects. On the one hand they could graze down phytoplankton stocks, but on the other hand, their NH₄ excretion supported enhanced uptake rates by the remaining, ungrazed cells.     

Influence of an altered salinity regime on the population structure of two infaunal bivalve species

Hydrological alterations in watersheds have changed the flows of freshwater to many nearshore marine environments. The ensuing alterations to the salinity environment of coastal waters may have implications for species distribution. This study describes the response of two common bivalves to a modified salinity environment imposed by freshwater inputs from a hydroelectric power station in Doubtful Sound, New Zealand. Populations of Austrovenus stutchburyi and Paphies australis inhabiting river deltas near the outflow of the power station in inner Doubtful Sound were more than an order of magnitude smaller in abundance than populations in neighbouring Bradshaw Sound where the salinity regime is unaltered. In addition, there was a lack of small size classes of both species in inner Doubtful Sound, suggesting that these populations are unsustainable over the long term (10–20 years). Laboratory experiments demonstrated that sustained exposure (>30 days) to low salinity (<10) significantly decreased bivalve survivorship; however, both species survived periods of exposure to freshwater up to at least 20 days in duration if followed by a period of return to normal seawater salinity. Examination of the extant salinity regime in light of these results indicates the current salinity environment in Doubtful Sound restricts bivalves to deeper waters (5–6 m depth). The observed discrepancy in the total biomass of these active suspension feeders between altered and control sites has potential implications for the flux of organic matter in the food webs of Fiordland's shallow soft sediment communities.     

The influence of prolonged mouth closure on selected components of the hyperbenthos in the littoral zone of the temporarily open/closed Kasouga Estuary,South Africa

The influence of prolonged mouth closure on the population dynamics of the caridian shrimp, Palaemon peringueyi and the estuarine isopod, Exosphaeroma hylocoetes, in the littoral zone of temporarily open/closed Kasouga Estuary located on the south-eastern coastline of southern Africa was assessed monthly over the period October 2007 to September 2008. Prolonged mouth closure of the estuary contributed to hypersaline conditions (psu > 35) prevailing throughout the estuary for the last four months of the study. The high salinities coincided with a decrease in the areal extent (up to 80%) of the submerged macrophytes, mainly Ruppia maritima, within the littoral zone of the estuary. Total abundance and biomass values of the shrimp and isopod over the period of investigation ranged from 0 to 14.6 ind m⁻², from 0 to 13.3 mg dwt m⁻², from 12 to 1540 ind m⁻² and from 0.1 to 2.16 mg dwt m⁻², respectively. Maximum values of both the shrimp and isopod were recorded in the upper reaches of the estuary in close association with R. maritima. Over the course of the investigation, both the abundance and biomass values of the shrimp decreased significantly (P < 0.05 in both cases) which could be related to reduced habitat availability, R. maritima, that acts as a refuge against fish predation. Additionally, the decrease in abundance and biomass values could be attributed to reduced recruitment opportunities for the shrimp and the cessation of reproduction in the estuarine isopod. The establishment of a link to the marine environment following an overtopping event in September 2008 contributed to a decrease in salinity within the system although no recruitment of either the isopod or shrimp was recorded.     

Distinctive stable isotope ratios in important zooplankton species in relation to estuarine salinity gradients: Potential tracer of fish migration

To assess the potential of stable isotope ratios as an indicator of fish migration within estuaries, stable isotope ratios in important zooplankton species were analyzed in relation to estuarine salinity gradients. Gut contents from migratory juveniles of the euryhaline marine fish Lateolabrax japonicus were examined along the Chikugo River estuary of the Ariake Sea, which has the most developed estuarine turbidity maximum (ETM) in Japan. Early juveniles in March and April preyed primarily on two copepod species; Sinocalanus sinensis at lower salinities and Acartia omorii at higher salinities. Late juveniles (standard length > 40 mm) at lower salinities preyed exclusively on the mysid Acanthomysis longirostris until July and complementarily on the decapod Acetes japonicus in August. These prey species were collected along the estuary during the spring–summer seasons of 2003 and 2004, and their carbon and nitrogen stable isotope ratios (δ¹³C and δ¹⁵N) were evaluated. The δ¹³C values of prey species were distinct from each other and were primarily depleted within and in close proximity to the ETM (salinity < 10); S. sinensis (−26.6‰) < Acanthomysis longirostris (−23.3‰) < Acartia omorii (−21.1‰) < Acetes japonicus (−18.5‰). The overall gradient of δ¹³C with salinity occurred for all prey species and showed minor temporal fluctuations, while it was not directly influenced by the δ¹³C values in particulate organic matter along the estuary. In contrast to δ¹³C, the δ¹⁵N values of prey species did not exhibit any clear relationship with salinity. The present study demonstrated that δ¹³C has the potential for application as a tracer of fish migration into lower salinity areas including the ETM.     

Effects of simulated benthic fluxes on phytoplankton dynamic and photosynthetic parameters in a mesocosm experiment (Bay of Brest,France)

Benthic faunal activity and density play an important role in determining the rates of benthic nutrient fluxes, which enrich the water column and contribute to phytoplankton growth. The intensity of nutrient fluxes in the Bay of Brest depends on the density of the invasive gastropod, Crepidula fornicata. In order to study the impact of benthic fluxes on phytoplankton dynamics, realistic daily nutrient inputs simulating various densities of C. fornicata were added to six enclosures during three weeks. The increase in fertilization intensity influenced the phytoplankton biomass. A succession from Chaetoceros spp. to Pseudo-nitzschia spp. and Leptocylindrus danicus was observed in all enclosures, but the dynamics of successions were different. Pseudo-nitzschia spp. was favored in the three more fertilized enclosures, while Chaetoceros spp. persisted longer in less enriched enclosures. Despite an apparent nitrogen limitation, the quantum efficiency of PSII (F_v/F_m) was high (>0.5) and stable in all enclosures. The maximal photosynthetic capacity (P^Bmax) was also invariable and oscillated around an average value of 2.23 mg C (mg Chl a)⁻¹ h⁻¹. The stability of F_v/F_m and P^Bmax observed at different nutrient input intensities demonstrates that the daily inputs maintained the physiological balance of the microalgae. The maximal light utilization efficiency (α) and the light saturation parameter (E_k) were also quite stable after day 8, which reveals that photosynthetic parameters were driven by growth constraints due to nutrient availability and not by incident light or species successions. We suggest that our results correspond to an “E_k independent variation” regulation. We propose that such regulation of photosynthetic parameters appears when there are frequent nutrient additions which do not allow replete nutrient conditions to be reached but lead to physiological equilibrium.     

Appendicularian assemblages and their space–time variability off the La Plata River,SW Atlantic Ocean

Among tunicates, the small planktonic appendicularians generally comprise a significant fraction of the mesozooplankton of estuarine environments. However, no spatio-temporal studies nor estimation of some ecological parameters such as biomass or pellet production of these organisms have been previously reported in La Plata River estuary. We studied the species composition and abundance as well as biomass and pellet production, associated with the river plume variations using data collected during seven spring (October) cruises. Approximately 80 samples were collected in each cruise with a Pairovet net (200 μm mesh size) trawled vertically through the water column; CTD data profiles were also recorded. Three transects at the north, middle and south of the estuary were performed in order to compare the environmental gradients to the species distribution. The river's discharges varied between years and it was reflected on the salinity distribution. The salinity was the main factor driving species composition. Oikopleura dioica, Oikopleura fusiformis and Fritillaria borealis were found, O. dioica being the dominant one. We detected that O. fusiformis was more abundant in stratified waters between salinities of 31 and 33 mainly during 1994, 1995 and 1996. Fritillaria borealis was found only in salinities higher than 33 and in homogenous waters being more abundant in 1995. This year was singular in the sense that no river plume was observed at the middle transect, as it is shown by the homogenous salinity profiles. Oikopleura dioica was present in stratified waters at all salinity ranges. In 1993, it was more abundant at low salinities with temperatures between 12 and 16 °C and a predominance of juvenile animals was observed. The contribution in biomass and pellet production of O. dioica in the stratified waters of this front was very high (27.91–66.58 g C m⁻² d⁻¹) revealing their importance in the estuary's carbon cycle.     

Nutrient and caloric dynamics in Avicennia marina leaves at different developmental and decay stages in Zhangjiang River Estuary,China

Avicennia marina is a typical mangrove species in the subtropical coastlines of China. The main objective of this study was to assess nutrient and caloric dynamics in A. marina leaves at different developmental and decay stages. Decomposition studies using litter bags suggested that the time required for the loss of half of the initial dry weight (t₅₀) was 19 days. The extracts of A. marina leaves contained non-tannin phenolics and tannin phenolics (hydrolysable tannin), but no condensed tannin. Non-tannin phenolics and tannin phenolics contents did not differ significantly from each other at various developmental stages, but decreased rapidly during leaf decomposition. Avicennia marina leaves had high N levels, and both N and P concentrations decreased significantly during senescence. During decomposition, N concentration of the leaf litter increased gradually but the phosphorus concentration showed a decrease in the first week, and both N and P remained the same towards the end of the experiment. The gross caloric value (GCV) of mature leaves was significantly higher than those of young and senescent leaves, while ash-free caloric value (AFCV) did not change significantly during leaf development and senescence. During leaf decomposition, both GCV and AFCV increased gradually and remained the same at late stages. In subtropical Zhangjiang River Estuary, high N levels and lack of condensed tannins in A. marina leaves were responsible for the fast rate of decay. Non-tannin phenolics and tannin phenolics had no great effect on rate of decay. Nitrogen resorption during leaf senescence, and high litter decomposition followed by nitrogen immobilization are the important nutrient conservation strategy for A. marina.     

Deep-water stands of Cystoseira zosteroides C. Agardh (Fucales,Ochrophyta) in the Northwestern Mediterranean: Insights into assemblage structure and population dynamics

Populations dominated by Cystoseira zosteroides, an endemic and threatened Mediterranean seaweed, colonize deep-water rocky habitats down to more than 50 m depth. Assemblages dominated by this species display high algal and invertebrate species richness. Algal biomass averages 1134 g dw m⁻². Erect and turf algae account for only 25% of total algal dry weight, while encrusting corallines are responsible for the remaining 75%. Sponges, bryozoans and ascidians constitute the dominant sessile macrofauna. Cystoseira zosteroides is the dominant erect algae, with a mean biomass of 60.6 g dw m⁻², and densities ranging from 4 to 7 plants m⁻². The alien turf alga Womersleyella setacea has a biomass of 104.2 g dw m⁻² and covers most of the understory substrate. The size-frequency distribution of C. zosteroides populations shows differences over time. Mean annual growth of the main axis is around 0.5 cm and mean annual mortality rate is lower than 2%. Recruitment was almost nil during the studied period of time (10 years). Processes structuring these deep-water Cystoseira stands must be driven by episodic disturbances, after-disturbance recruitment pulses, and long periods of steady growth that last at least 10 years. However, it is also possible that recruitment is irreversibly inhibited by the alien alga W. setacea in which case these old-growth stands are faced with extinction. The highly diversified assemblages and the low growth and low mortality rates of C. zosteroides indicate high vulnerability to natural and anthropogenic disturbances, and call for effective measures to ensure their conservation.     

Turbidity limits gas exchange in a large macrotidal estuary

In estuaries, the gas transfer velocity (k) is driven by a combination of two major physical drivers, wind and water current. The k values for CO₂ in the macrotidal Gironde Estuary were obtained from 159 simultaneous pCO₂ and floating chamber flux measurements. Values of k increased with wind speed and were significantly greater when water currents and wind were in opposing directions. At low wind speeds (<1 m s⁻¹), k increased with water current velocities (0–1.5 m s⁻¹) following an exponential trend. The latter was a good proxy for the Y-intercept in a generic equation for k versus wind speed in estuaries. We also found that, in this turbid estuary, k was significantly lower at high turbidity. The presence of suspended material in great concentrations (TSS > 0.2 g L⁻¹) had a significant role in attenuating turbulence and therefore gas exchange. This result has important consequences for modeling water oxygenation in estuarine turbidity maxima. For seven low turbidity estuaries previously described in the literature, the slope of the linear regression between k and wind speed correlates very well with the estuary surface area due to a fetch effect. In the Gironde Estuary, this slope follows the same trend at low turbidity (TSS < 0.2 g L⁻¹), but is on average significantly lower than in other large estuaries and decreases linearly with the TSS concentration. A new generic equation for estuaries is proposed that gives k as a function of water current velocity, wind speed, estuarine surface area and TSS concentration.     

Limno-tolerant bacteria govern nitrate concentration in Mandovi Estuary,India

The spatial and temporal abundances of limno-tolerant and halo-tolerant bacteria were investigated in the tide-dominated Mandovi estuary along the west coast of India. These investigations were carried out in relation to various environmental parameters on a monthly basis at three fixed stations for a year. On an annual basis, the estuary showed an average salinity of 28.2, 17.4, and 12.6 at the mouth, midstream and upstream region. Halo-tolerant retrievable count (HTRC) and limno-tolerant retrievable count (LTRC) of bacteria were in the order of 10⁶ L⁻¹. Among the environmental parameters, a strong negative relationship between salinity and nitrate (r = −0.806; p < 0.001) suggested that 64% of the variation could be due to fresh water influence in the estuary. The limno-tolerant retrievable count (LTRC) brought about 23% variations in nitrate concentration. This influence was maximum during the monsoon (r = 0.522; p < 0.05) especially in the surface waters (r = 0.624; p < 0.001) suggesting nitrate reduction by LTRC. Measurements of nitrate reducing activity (NRA) in whole-water samples along the salinity gradient in the estuary also revealed higher reduction rates at lower salinity upstream. This was further confirmed by culture experiments where the limno-tolerant bacteria showed higher NRA than halo-tolerant forms. It is therefore suggested that LTRC is more actively involved in the variation of nitrate that enters the Mandovi estuary particularly during the monsoon.     

Do environmental factors influence the movement of estuarine fish? A case study using acoustic telemetry

Telemetry methods were used to investigate the influence of selected environmental variables on the position and movement of an estuarine-dependent haemulid, the spotted grunter Pomadasys commersonnii (Lacepède 1801), in the Great Fish Estuary, South Africa. Forty individuals (263–698 mm TL) were surgically implanted with acoustic coded transmitters and manually tracked during two periods (7 February to 24 March 2003; n = 20 and 29 September to 15 November 2003; n = 20). Real-time data revealed that spotted grunter are euryhaline (0–37) and are able to tolerate large variations in turbidity (4–356 FTU) and temperature (16–30 °C). However, the fish altered their position in response to large fluctuations in salinity, temperature and turbidity, which are characteristic of tidal estuarine environments. Furthermore, tidal phase had a strong influence on the position of spotted grunter in the estuary.     

Effect of bed roughness on turbulent boundary layer and net sediment transport under asymmetric waves

This paper presents an investigation of the roughness effects in the turbulent boundary layer for asymmetric waves by using the baseline (BSL) k–ω model. This model is validated by a set of the experimental data with different wave non-linearity index, N_i (namely, N_i = 0.67, N_i = 0.60 and N_i = 0.58). It is further used to simulate asymmetric wave velocity flows with several values of the roughness parameter (a_m/k_s) which increase gradually, namely from a_m/k_s = 35 to a_m/k_s = 963. The effect of the roughness tends to increase the turbulent kinetic energy and to decrease the mean velocity distribution in the inner boundary layer, whereas in the outer boundary layer, the roughness alters the turbulent kinetic energy and the mean velocity distribution is relatively unaffected. A new simple calculation method of bottom shear stress based on incorporating velocity and acceleration terms is proposed and applied into the calculation of the rate of bed-load transport induced by asymmetric waves. And further, the effect of bed roughness on the bottom shear stress and bed-load sediment transport under asymmetric waves is examined with the turbulent model, the newly proposed method, and the existing calculation method. It is found that the higher roughness elements increase the magnitude of bottom shear stress along a wave cycle and consequently, the potential net sediment transport rate. Moreover, the wave non-linearity also shows a big impact on the bottom shear stress and the net sediment transport.     

Photosynthesis,growth and survival of the Mediterranean seagrass Posidonia oceanica in response to simulated salinity increases in a laboratory mesocosm system

This study aims to examine the effect of increased salinity on the photosynthetic activity of the Mediterranean seagrass Posidonia oceanica in a laboratory mesocosm system. To do this, large rhizome fragments were transplanted in a mesocosm laboratory system and maintained at 37 (ambient salinity, control treatment), 39, 41 and 43 (hypersaline treatments) for 47 days. Pigment content, light absorption, photosynthetic characteristics (derived from P vs. E curves and fluorescence parameters), and shoot size, growth rates and net shoot change were determined at the end of the experimental period. Both net and gross photosynthetic rates of plants under hypersaline conditions were significantly reduced, with rates some 25–33% and 13–20% lower than in control plants. The pigment content (Chla, Chlb, Chlb:Chla molar ratio, total carotenoids and carotenoids:Chla ratio), leaf absorptance and maximum quantum yield of PSII (F_v/F_m) of control plants showed little or no changes under hypersaline conditions, which suggests that alterations to the capacity of the photosynthetic apparatus to capture and process light were not responsible for the reduced photosynthetic rates. In contrast, dark respiration rates increased substantially, with mean values up to 98% higher than in control leaves. These results suggest that the respiratory demands of the osmoregulatory process are likely to be responsible for the observed decrease in photosynthetic rates, although alterations to photosynthetic carbon assimilation and reduction could also be involved. As a consequence, leaf carbon balance was considerably impaired and leaf growth rates decreased as salinity increased above the ambient (control) salinity. No significant differences were found in the percentage of net shoot change, but mean values were clearly negative at salinity levels of 41 and 43. Results presented here indicate that photosynthesis of P. oceanica is highly sensitive to hypersaline stress and that it likely account for the decline in leaf growth and shoot survival reported in this and previous studies in response to even small increments of the ambient salinity.