Satellite-based automated burned area detection: A performance assessment of the MODIS MCD45A1 in the Brazilian savanna

Burnings, which cause major changes to the environment, can be effectively monitored via satellite data, regarding both the identification of active fires and the estimation of burned areas. Among the many orbital sensors suitable for mapping burned areas on global and regional scales, the moderate resolution imaging spectroradiometer (MODIS), on board the Terra and Aqua platforms, has been the most widely utilized. In this study, the performance of the MODIS MCD45A1 burned area product was thoroughly evaluated in the Brazilian savanna, the second largest biome in South America and a global biodiversity hotspot, characterized by a conspicuous climatic seasonality and the systematic occurrence of natural and anthropogenic fires. Overall, September MCD45A1 polygons (2000–2012) compared well to the Landsat-based reference mapping (r² = 0.92) and were closely accompanied, on a monthly basis, by MOD14 and MYD14 hotspots (r² = 0.89), although large omissions errors, linked to landscape patterns, structures, and overall conditions depicted in each reference image, were observed. In spite of its spatial and temporal limitations, the MCD45A1 product proved instrumental for mapping and understanding fire behavior and impacts on the Cerrado landscapes.     

A Spatio-Temporal Enhancement Method for medium resolution LAI (STEM-LAI)

Satellite remote sensing has been used successfully to map leaf area index (LAI) across landscapes, but advances are still needed to exploit multi-scale data streams for producing LAI at both high spatial and temporal resolution. A multi-scale Spatio-Temporal Enhancement Method for medium resolution LAI (STEM-LAI) has been developed to generate 4-day time-series of Landsat-scale LAI from existing medium resolution LAI products. STEM-LAI has been designed to meet the demands of applications requiring frequent and spatially explicit information, such as effectively resolving rapidly evolving vegetation dynamics at sub-field (30 m) scales. In this study, STEM-LAI is applied to Moderate Resolution Imaging Spectroradiometer (MODIS) based LAI data and utilizes a reference-based regression tree approach for producing MODIS-consistent, but Landsat-based, LAI. The Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) is used to interpolate the downscaled LAI between Landsat acquisition dates, providing a high spatial and temporal resolution improvement over existing LAI products. STARFM predicts high resolution LAI by blending MODIS and Landsat based information from a common acquisition date, with MODIS data from a prediction date. To demonstrate its capacity to reproduce fine-scale spatial features observed in actual Landsat LAI, the STEM-LAI approach is tested over an agricultural region in Nebraska. The implementation of a 250 m resolution LAI product, derived from MODIS 1 km data and using a scale consistent approach based on the Normalized Difference Vegetation Index (NDVI), is found to significantly improve accuracies of spatial pattern prediction, with the coefficient of efficiency (E) ranging from 0.77–0.94 compared to 0.01–0.85 when using 1 km LAI inputs alone. Comparisons against an 11-year record of in-situ measured LAI over maize and soybean highlight the utility of STEM-LAI in reproducing observed LAI dynamics (both characterized by r² = 0.86) over a range of plant development stages. Overall, STEM-LAI represents an effective downscaling and temporal enhancement mechanism that predicts in-situ measured LAI better than estimates derived through linear interpolation between Landsat acquisitions. This is particularly true when the in-situ measurement date is greater than 10 days from the nearest Landsat acquisition, with prediction errors reduced by up to 50%. With a streamlined and completely automated processing interface, STEM-LAI represents a flexible tool for LAI disaggregation in space and time that is adaptable to different land cover types, landscape heterogeneities, and cloud cover conditions.     

Monitoring land surface albedo and vegetation dynamics using high spatial and temporal resolution synthetic time series from Landsat and the MODIS BRDF/NBAR/albedo product

Seasonal vegetation phenology can significantly alter surface albedo which in turn affects the global energy balance and the albedo warming/cooling feedbacks that impact climate change. To monitor and quantify the surface dynamics of heterogeneous landscapes, high temporal and spatial resolution synthetic time series of albedo and the enhanced vegetation index (EVI) were generated from the 500 m Moderate Resolution Imaging Spectroradiometer (MODIS) operational Collection V006 daily BRDF/NBAR/albedo products and 30 m Landsat 5 albedo and near-nadir reflectance data through the use of the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM). The traditional Landsat Albedo (Shuai et al., 2011) makes use of the MODIS BRDF/Albedo products (MCD43) by assigning appropriate BRDFs from coincident MODIS products to each Landsat image to generate a 30 m Landsat albedo product for that acquisition date. The available cloud free Landsat 5 albedos (due to clouds, generated every 16 days at best) were used in conjunction with the daily MODIS albedos to determine the appropriate 30 m albedos for the intervening daily time steps in this study. These enhanced daily 30 m spatial resolution synthetic time series were then used to track albedo and vegetation phenology dynamics over three Ameriflux tower sites (Harvard Forest in 2007, Santa Rita in 2011 and Walker Branch in 2005). These Ameriflux sites were chosen as they are all quite nearby new towers coming on line for the National Ecological Observatory Network (NEON), and thus represent locations which will be served by spatially paired albedo measures in the near future. The availability of data from the NEON towers will greatly expand the sources of tower albedometer data available for evaluation of satellite products. At these three Ameriflux tower sites the synthetic time series of broadband shortwave albedos were evaluated using the tower albedo measurements with a Root Mean Square Error (RMSE) less than 0.013 and a bias within the range of ±0.006. These synthetic time series provide much greater spatial detail than the 500 m gridded MODIS data, especially over more heterogeneous surfaces, which improves the efforts to characterize and monitor the spatial variation across species and communities. The mean of the difference between maximum and minimum synthetic time series of albedo within the MODIS pixels over a subset of satellite data of Harvard Forest (16 km by 14 km) was as high as 0.2 during the snow-covered period and reduced to around 0.1 during the snow-free period. Similarly, we have used STARFM to also couple MODIS Nadir BRDF Adjusted Reflectances (NBAR) values with Landsat 5 reflectances to generate daily synthetic times series of NBAR and thus Enhanced Vegetation Index (NBAR-EVI) at a 30 m resolution. While normally STARFM is used with directional reflectances, the use of the view angle corrected daily MODIS NBAR values will provide more consistent time series. These synthetic times series of EVI are shown to capture seasonal vegetation dynamics with finer spatial and temporal details, especially over heterogeneous land surfaces.     

Detecting forest damage after a low-severity fire using remote sensing at multiple scales

Remote sensing technologies are an ideal platform to examine the extent and impact of fire on the landscape. In this study we assess that capacity of the RapidEye constellation and Landsat (Thematic Mapper and Operational Land Imager to map fine-scale burn attributes for a small, low severity prescribed fire in a dry Western Canadian forest. Estimates of burn severity from field data were collated into a simple burn index and correlated with a selected suite of common spectral vegetation indices. Burn severity classes were then derived to map fire impacts and estimate consumed woody surface fuels (diameter ≥2.6 cm). All correlations between the simple burn index and vegetation indices produced significant results (p < 0.01), but varied substantially in their overall accuracy. Although the Landsat Soil Adjusted Vegetation Index provided the best regression fit (R² = 0.56), results suggested that RapidEye provided much more spatially detailed estimates of tree damage (Soil Adjusted Vegetation Index, R² = 0.51). Consumption estimates of woody surface fuels ranged from 3.38 ± 1.03 Mg ha⁻¹ to 11.73 ± 1.84 Mg ha⁻¹, across four derived severity classes with uncertainties likely a result of changing foliage moisture between the before and after fire images. While not containing spectral information in the short wave infrared, the spatial variability provided by the RapidEye imagery has potential for mapping and monitoring fine scale forest attributes, as well as the potential to resolve fire damage at the individual tree level.     

Testing estimation of water surface in Italian rice district from MODIS satellite data

Recent changes in rice crop management within Northern Italy rice district led to a reduction of seeding in flooding condition, which may have an impact on reservoir water management and on the animal and plant communities that depend on the flooded paddies. Therefore, monitoring and quantifying the spatial and temporal variability of water presence in paddy fields is becoming important. In this study we present a method to estimate dynamics of presence of standing water (i.e. fraction of flooded area) in rice fields using MODIS data. First, we produced high resolution water presence maps from Landsat by thresholding the Normalised Difference Flood Index (NDFI) made: we made it by comparing five Landsat 8 images with field-obtained information about rice field status and water presence. Using these data we developed an empirical model to estimate the flooding fraction of each MODIS cell. Finally we validated the MODIS-based flooding maps with both Landsat and ground information. Results showed a good predictability of water surface from Landsat (OA = 92%) and a robust usability of MODIS data to predict water fraction (R² = 0.73, EF = 0.57, RMSE = 0.13 at 1 × 1 km resolution). Analysis showed that the predictive ability of the model decreases with the greening up of rice, so we used NDVI to automatically discriminate estimations for inaccurate cells in order to provide the water maps with a reliability flag. Results demonstrate that it is possible to monitor water dynamics in rice paddies using moderate resolution multispectral satellite data. The achievement is a proof of concept for the analysis of MODIS archives to investigate irrigation dynamics in the last 15 years to retrieve information for ecological and hydrological studies.     

Fire danger assessment in Iran based on geospatial information

Fire danger assessment is a vital issue to alleviate the impacts of wildland fires. In this study, a fire danger assessment system is proposed, which extensively uses geographical databases to characterize the spatial variations of fire danger conditions in Iran. This assessment requires three steps: (i) generation of the required input variables, (ii) methods to integrate those variables for creating synthetic indices and (iii) validation of those indices versus fire occurrence data. This fire danger model is based on previous works but adapted to Iranian conditions. It includes an estimation of the fire ignition potential (both considering human and climatic factors) and fire propagation potential. The former was generated from a logistic regression approach based on a wide range of input variables. The fire propagation probability was estimated from the Flammap fire behavior model. A first stage for validation of our fire danger system was based on comparing the estimated danger values to actual fire occurrence, based on satellite detected active fires and burned areas. The logistic regression model for fire ignition probability estimated 72.7% of true ignitions. Detected hotspots occurred more frequently in areas with higher fire ignition probability (average value: 0.65) than non hotspots (average value: 0.4). Propagation probability showed higher values for areas with higher proportion of burned area (r = 0.68, p < 0.001).     

Dry-season vegetation mass and cover fraction from SWIR1.6 and SWIR2.1 band ratio: Ground-radiometer and MODIS data in the Sahel

The potential of the short-wave infrared (SWIR) bands to detect dry-season vegetation mass and cover fraction is investigated with ground radiometry and MODIS data, confronted to vegetation data collected in rangeland and cropland sites in the Sahel (Senegal, Niger, Mali). The ratio of the 1.6 and 2.1 μm bands (called STI) acquired with a ground radiometer proved well suited for grassland mass estimation up to 2500 kg/ha with a linear relation (r² = 0.89). A curvilinear regression is accurate for masses ranging up to 3500 kg/ha. STI proved also well suited to retrieve vegetation cover fraction in crop fields, fallows and rangelands. Such dry-season monitoring, with either ground or satellite data, has important applications for forage, erosion risk and fire risk assessment in semi-arid areas.     

Intercomparison and validation of MODIS and GLASS leaf area index (LAI) products over mountain areas: A case study in southwestern China

The validation study of leaf area index (LAI) products over rugged surfaces not only gives additional insights into data quality of LAI products, but deepens understanding of uncertainties regarding land surface process models depended on LAI data over complex terrain. This study evaluated the performance of MODIS and GLASS LAI products using the intercomparison and direct validation methods over southwestern China. The spatio-temporal consistencies, such as the spatial distributions of LAI products and their statistical relationship as a function of topographic indices, time, and vegetation types, respectively, were investigated through intercomparison between MODIS and GLASS products during the period 2011–2013. The accuracies and change ranges of these two products were evaluated against available LAI reference maps over 10 sampling regions which standed for typical vegetation types and topographic gradients in southwestern China.The results show that GLASS LAI exhibits higher percentage of good quality data (i.e. successful retrievals) and smoother temporal profiles than MODIS LAI. The percentage of successful retrievals for MODIS and GLASS is vulnerable to topographic indices, especially to relief amplitude. Besides, the two products do not capture seasonal dynamics of crop, especially in spring over heterogeneously hilly regions. The yearly mean LAI differences between MODIS and GLASS are within ±0.5 for 64.70% of the total retrieval pixels over southwestern China. The spatial distribution of mean differences and temporal profiles of these two products are inclined to be dominated by vegetation types other than topographic indices. The spatial and temporal consistency of these two products is good over most area of grasses/cereal crops; however, it is poor for evergreen broadleaf forest. MODIS presents more reliable change range of LAI than GLASS through comparison with fine resolution reference maps over most of sampling regions. The accuracies of direct validation are obtained for GLASS LAI (r = 0.35, RMSE = 1.72, mean bias = −0.71) and MODIS LAI (r = 0.49, RMSE = 1.75, mean bias = −0.67). GLASS performs similarly to MODIS, but may be marginally inferior to MODIS based on our direct validation results. The validation experience demonstrates the necessity and importance of topographic consideration for LAI estimation over mountain areas. Considerable attention will be paid to the improvements of surface reflectance, retrieval algorithm and land cover types so as to enhance the quality of LAI products in topographically complex terrain.     

Empirical models for estimating the suspended sediment concentration in Amazonian white water rivers using Landsat 5/TM

Suspended sediment yield is a very important environmental indicator within Amazonian fluvial systems, especially for rivers dominated by inorganic particles, referred to as white water rivers. For vast portions of Amazonian rivers, suspended sediment concentration (SSC) is measured infrequently or not at all. However, remote sensing techniques have been used to estimate water quality parameters worldwide, from which data for suspended matter is the most successfully retrieved. This paper presents empirical models for SSC retrieval in Amazonian white water rivers using reflectance data derived from Landsat 5/TM. The models use multiple regression for both the entire dataset (global model, N = 504) and for five segmented datasets (regional models) defined by general geological features of drainage basins. The models use VNIR bands, band ratios, and the SWIR band 5 as input. For the global model, the adjusted R² is 0.76, while the adjusted R² values for regional models vary from 0.77 to 0.89, all significant (p-value < 0.0001). The regional models are subject to the leave-one-out cross validation technique, which presents robust results. The findings show that both the average error of estimation and the standard deviation increase as the SSC range increases. Regional models were more accurate when compared with the global model, suggesting changes in optical proprieties of water sampled at different sampling stations. Results confirm the potential for the estimation of SSC from Landsat/TM historical series data for the 1980s and 1990s, for which the in situ database is scarce. Such estimates supplement the SSC temporal series, providing a more comprehensive SSC temporal series which may show environmental dynamics yet unknown.     

Determining crop acreage estimates for specific winter crops using shape attributes from sequential MODIS imagery

There are increasing societal and plant industry demands for more accurate, objective and near real-time crop production information to meet both economic and food security concerns. The advent of the Moderate Resolution Imaging Spectroradiometer (MODIS) satellite platform has augmented the capability of satellite-based applications to monitor large agricultural areas at acceptable pixel scale, cost and accuracy. Fitting parametric profiles to growing season vegetation index time series reduces the volume of data and provides simple quantitative parameters that relates to crop phenology (sowing date, flowering). In this study, we modelled various Gaussian profiles to time sequential MODIS enhanced vegetation index (EVI) images over winter crops in Queensland, Australia. Three simple Gaussian models were evaluated in their effectiveness to identify and classify various winter crop types and coverage at both pixel and regional scales across Queensland's main agricultural areas. Equal to or greater than 93% classification accuracies were obtained in determining crop acreage estimates at pixel scale for each of the Gaussian modelled approaches. Significant high to moderate correlations (log-linear transformation) were also obtained for determining total winter crop (R² = 0.93) areas as well as specific crop acreage for wheat (R² = 0.86) and barley (R² = 0.83). Conversely, it was much more difficult to predict chickpea acreage (R² ≤ 0.26), mainly due to very large uncertainties in survey data. The quantitative approach utilised here further had additional benefits of characterising crop phenology in terms of length of growing season and providing regression diagnostics of how well the fitted profiles matched the EVI time series. The Gaussian curve models utilised here are novel in application and therefore will enhance the use and adoption of remote sensing technologies in targeted agricultural application. With innate simplicity and accuracies comparable to other more convoluted multi-temporal approaches it is a good candidate in determining total and specific crop acreage estimates in future national and global food security frameworks.     

Modelling the standing timber volume of Baden-Württemberg—A large-scale approach using a fusion of Landsat,airborne LiDAR and National Forest Inventory data

Remote sensing-based timber volume estimation is key for modelling the regional potential, accessibility and price of lignocellulosic raw material for an emerging bioeconomy. We used a unique wall-to-wall airborne LiDAR dataset and Landsat 7 satellite images in combination with terrestrial inventory data derived from the National Forest Inventory (NFI), and applied generalized additive models (GAM) to estimate spatially explicit timber distribution and volume in forested areas. Since the NFI data showed an underlying structure regarding size and ownership, we additionally constructed a socio-economic predictor to enhance the accuracy of the analysis. Furthermore, we balanced the training dataset with a bootstrap method to achieve unbiased regression weights for interpolating timber volume. Finally, we compared and discussed the model performance of the original approach (r² = 0.56, NRMSE = 9.65%), the approach with balanced training data (r² = 0.69, NRMSE = 12.43%) and the final approach with balanced training data and the additional socio-economic predictor (r² = 0.72, NRMSE = 12.17%). The results demonstrate the usefulness of remote sensing techniques for mapping timber volume for a future lignocellulose-based bioeconomy.     

Spatially detailed retrievals of spring phenology from single-season high-resolution image time series

Vegetation indices derived from satellite image time series have been extensively used to estimate the timing of phenological events like season onset. Medium spatial resolution (≥250 m) satellite sensors with daily revisit capability are typically employed for this purpose. In recent years, phenology is being retrieved at higher resolution (≤30 m) in response to increasing availability of high-resolution satellite data. To overcome the reduced acquisition frequency of such data, previous attempts involved fusion between high- and medium-resolution data, or combinations of multi-year acquisitions in a single phenological reconstruction. The objectives of this study are to demonstrate that phenological parameters can now be retrieved from single-season high-resolution time series, and to compare these retrievals against those derived from multi-year high-resolution and single-season medium-resolution satellite data. The study focuses on the island of Schiermonnikoog, the Netherlands, which comprises a highly-dynamic saltmarsh, dune vegetation, and agricultural land. Combining NDVI series derived from atmospherically-corrected images from RapidEye (5 m-resolution) and the SPOT5 Take5 experiment (10m-resolution) acquired between March and August 2015, phenological parameters were estimated using a function fitting approach. We then compared results with phenology retrieved from four years of 30 m Landsat 8 OLI data, and single-year 100 m Proba-V and 250 m MODIS temporal composites of the same period. Retrieved phenological parameters from combined RapidEye/SPOT5 displayed spatially consistent results and a large spatial variability, providing complementary information to existing vegetation community maps. Retrievals that combined four years of Landsat observations into a single synthetic year were affected by the inclusion of years with warmer spring temperatures, whereas adjustment of the average phenology to 2015 observations was only feasible for a few pixels due to cloud cover around phenological transition dates. The Proba-V and MODIS phenology retrievals scaled poorly relative to their high-resolution equivalents, indicating that medium-resolution phenology retrievals need to be interpreted with care, particularly in landscapes with fine-scale land cover variability.     

Phenology from Landsat when data is scarce: Using MODIS and Dynamic Time-Warping to combine multi-year Landsat imagery to derive annual phenology curves

Green-leaf phenology describes the development of vegetation throughout a growing season and greatly affects the interaction between climate and the biosphere. Remote sensing is a valuable tool to characterize phenology over large areas but doing at fine- to medium resolution (e.g., with Landsat data) is difficult because of low numbers of cloud-free images in a single year. One way to overcome data availability limitations is to merge multi-year imagery into one time series, but this requires accounting for phenological differences among years. Here we present a new approach that employed a time series of a MODIS vegetation index data to quantify interannual differences in phenology, and Dynamic Time Warping (DTW) to re-align multi-year Landsat images to a common phenology that eliminates year-to-year phenological differences. This allowed us to estimate annual phenology curves from Landsat between 2002 and 2012 from which we extracted key phenological dates in a Monte-Carlo simulation design, including green-up (GU), start-of-season (SoS), maturity (Mat), senescence (Sen), end-of-season (EoS) and dormancy (Dorm). We tested our approach in eight locations across the United States that represented forests of different types and without signs of recent forest disturbance. We compared Landsat-based phenological transition dates to those derived from MODIS and ground-based camera data from the PhenoCam-network. The Landsat and MODIS comparison showed strong agreement. Dates of green-up, start-of-season and maturity were highly correlated (r 0.86-0.95), as were senescence and end-of-season dates (r > 0.85) and dormancy (r > 0.75). Agreement between the Landsat and PhenoCam was generally lower, but correlation coefficients still exceeded 0.8 for all dates. In addition, because of the high data density in the new Landsat time series, the confidence intervals of the estimated keydates were substantially lower than in case of MODIS and PhenoCam. Our study thus suggests that by exploiting multi-year Landsat imagery and calibrating it with MODIS data it is possible to describe green-leaf phenology at much finer spatial resolution than previously possible, highlighting the potential for fine scale phenology maps using the rich Landsat data archive over large areas.     

Vegetation chlorophyll estimates in the Amazon from multi-angle MODIS observations and canopy reflectance model

As a preparatory study for future hyperspectral missions that can measure canopy chemistry, we introduce a novel approach to investigate whether multi-angle Moderate Resolution Imaging Spectroradiometer (MODIS) data can be used to generate a preliminary database with long-term estimates of chlorophyll. MODIS monthly chlorophyll estimates between 2000 and 2015, derived from a fully coupled canopy reflectance model (ProSAIL), were inspected for consistency with eddy covariance fluxes, tower-based hyperspectral images and chlorophyll measurements. MODIS chlorophyll estimates from the inverse model showed strong seasonal variations across two flux-tower sites in central and eastern Amazon. Marked increases in chlorophyll concentrations were observed during the early dry season. Remotely sensed chlorophyll concentrations were correlated to field measurements (r² = 0.73 and r² = 0.98) but the data deviated from the 1:1 line with root mean square errors (RMSE) ranging from 0.355 μg cm⁻² (Tapajós tower) to 0.470 μg cm⁻² (Manaus tower). The chlorophyll estimates were consistent with flux tower measurements of photosynthetically active radiation (PAR) and net ecosystem productivity (NEP). We also applied ProSAIL to mono-angle hyperspectral observations from a camera installed on a tower to scale modeled chlorophyll pigments to MODIS observations (r² = 0.73). Chlorophyll pigment concentrations (Chl_A+B) were correlated to changes in the amount of young and mature leaf area per month (0.59 ≤  r² ≤  0.64). Increases in MODIS observed Chl_A+B were preceded by increased PAR during the dry season (0.61 ≤ r² ≤  0.62) and followed by changes in net carbon uptake. We conclude that, at these two sites, changes in LAI, coupled with changes in leaf chlorophyll, are comparable with seasonality of plant productivity. Our results allowed the preliminary development of a 15-year time series of chlorophyll estimates over the Amazon to support canopy chemistry studies using future hyperspectral sensors.     

Retrieval of land surface temperature from the Kalpana-1 VHRR data using a single-channel algorithm and its validation over western India

Indian geostationary satellite Kalpana-1 (K1) offers a potential to capture the diurnal cycle of land surface temperature (LST) through thermal infrared channel (10.5–12.5 μm) observations of the Very High Resolution Radiometer (VHRR) sensor. A study was carried out to retrieve LST by adapting a generalized single-channel (SC) algorithm (Jiménez-Muñoz and Sobrino, 2003) for the VHRR sensor over India. The basis of SC algorithm depends on the concept of Atmospheric Functions (AFs) that are dependent on transmissivity, upwelling and downwelling radiances of the atmosphere. In the present study AFs were computed for the VHRR sensor through the MODTRAN simulations based upon varying atmospheric and surface inputs. The AFs were fitted with the atmospheric columnar water vapour content and a set of coefficients was derived for LST retrieval. The K1-LST derived with the SC algorithm was validated with (a) in situ measurements at two sites located in western parts of India and (b) the MODIS LST products. Comparison of K1-LST with the in situ measurements demonstrated that SC algorithm was successful in capturing the prominent diurnal variations of 283–332 K in the LST at desert and agriculture experimental sites with a rmse of 1.6 K and 2.7 K, respectively. Inter comparison of K1-LST and MODIS LST showed a reasonable agreement between these two retrievals up to LST of 300 K, however a cold bias up to 7.9 K was observed in MODIS LST for higher LST values (310–330 K) over the hot desert region.     

Retrieval of leaf area index in alpine wetlands using a two-layer canopy reflectance model

In this paper, we focused on the retrieval of the LAI in an alpine wetland located in western part of China in late August and early July 2011. A two-layer canopy reflectance model (ACRM) was used to establish the relationships between the LAI and the reflectance of near-infrared (NIR) and red (RED) wavebands. The reflectance data were derived from Landsat TM L1T product and the Terra and Aqua MODIS 16-day and 8-day composite reflectance products (MOD/MYD09) at 250 m resolution. Due to the lack of the information about some major input parameters for ACRM, which are sensitive to model outputs in the reflectance of NIR and RED wavebands, the inverse problem was ill-posed. To overcome this problem, a method of increasing the sensitivity of the LAI while reducing the influence of other model free parameters based on the study of free parameters’ sensitivity to the ACRM outputs and the region’s features was studied. The area of interest was divided into two parts using the approximately statistic normalized difference vegetation index (NDVI) value around 0.5. One part was sparse vegetation (0.1 < NDVI < 0.5), which is more sensitive to soil background effects and less sensitive to the canopy biophysical and biochemical variables. The other part was dense vegetation (0.5 ≤ NDVI < 1.0), which is less sensitive to soil background effects and more sensitive to plant canopies and leaf parameters. Then, the relationships of ρ_nir–LAI and ρ_red–LAI were established using a look-up table algorithm for the two parts. Furthermore, a regularization technique for fast pixel-wise retrieval was introduced to reduce the elements of LUT sets while maintaining a relatively high accuracy. The results were very promising compared to the field measured LAI values that the correlation (R²) of the measured LAI values and retrieved LAI values reached 0.95, and the root-mean-square deviation (RMSD) was 0.33 for late August, 2011, while the R² reached 0.82 and RMSD was 0.25 for early July 2011.     

Integrating age in the detection and mapping of incongruous patches in coffee (Coffea arabica) plantations using multi-temporal Landsat 8 NDVI anomalies

The development of cost-effective, reliable and easy to implement crop condition monitoring methods is urgently required for perennial tree crops such as coffee (Coffea arabica), as they are grown over large areas and represent long term and higher levels of investment. These monitoring methods are useful in identifying farm areas that experience poor crop growth, pest infestation, diseases outbreaks and/or to monitor response to management interventions. This study compares field level coffee mean NDVI and LSWI anomalies and age-adjusted coffee mean NDVI and LSWI anomalies in identifying and mapping incongruous patches across perennial coffee plantations. To achieve this objective, we first derived deviation of coffee pixels from the global coffee mean NDVI and LSWI values of nine sequential Landsat 8 OLI image scenes. We then evaluated the influence of coffee age class (young, mature and old) on Landsat-scale NDVI and LSWI values using a one-way ANOVA and since results showed significant differences, we adjusted NDVI and LSWI anomalies for age-class. We then used the cumulative inverse distribution function (α ≤ 0.05) to identify fields and within field areas with excessive deviation of NDVI and LSWI from the global and the age-expected mean for each of the Landsat 8 OLI scene dates spanning three seasons. Results from accuracy assessment indicated that it was possible to separate incongruous and healthy patches using these anomalies and that using NDVI performed better than using LSWI for both global and age-adjusted mean anomalies. Using the age-adjusted anomalies performed better in separating incongruous and healthy patches than using the global mean for both NDVI (Overall accuracy = 80.9% and 68.1% respectively) and for LSWI (Overall accuracy = 68.1% and 48.9% respectively). When applied to other Landsat 8 OLI scenes, the results showed that the proportions of coffee fields that were modelled incongruent decreased with time for the young age category and while it increased for the mature and old age classes with time. We concluded that the method could be useful for the identification of anomalous patches using Landsat scale time series data to monitor large coffee plantations and provide an indication of areas requiring particular field attention.     

Relative suitability of indices derived from Landsat ETM+ and SPOT 5 for detecting fire severity in sagebrush steppe

Remote sensing indices of burn area and fire severity have been developed and tested for forest ecosystems, but not sparsely vegetated, desert shrub-steppe in which large wildfires are a common occurrence and a major issue for land management. We compared the performance of remote sensing indices for detecting burn area and fire severity with extensive ground-based cover assessments made before and after the prescribed burning of a 3 km² shrub-steppe area. The remote sensing indices were based on either Landsat 7 ETM+ or SPOT 5 data, using either single or multiple dates of imagery. The indices delineating burned versus unburned areas had better overall, User, and Producer's accuracies than indices delineating levels of fire severity. The Soil Adjusted Vegetation Index (SAVI) calculated from SPOT had the greatest overall accuracy (100%) in delineating burned versus unburned areas. The relative differenced Normalized Burn Ratio (RdNBR) using Landsat ETM+ provided the highest accuracies (73% overall accuracy) for delineating fire severity. Though SPOT's spatial resolution likely conferred advantages for determining burn boundaries, the higher spectral resolution (particularly band 7, 2.21 μm) of Landsat ETM+ may be necessary for detecting differences in fire severity in sparsely vegetated shrub-steppe.     

Estimating winter wheat biomass by assimilating leaf area index derived from fusion of Landsat-8 and MODIS data

A sufficient number of satellite acquisitions in a growing season are essential for deriving agronomic indicators, such as green leaf area index (GLAI), to be assimilated into crop models for crop productivity estimation. However, for most high resolution orbital optical satellites, it is often difficult to obtain images frequently due to their long revisit cycles and unfavorable weather conditions. Data fusion algorithms, such as the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) and the Enhanced STARFM (ESTARFM), have been developed to generate synthetic data with high spatial and temporal resolution to address this issue. In this study, we evaluated the approach of assimilating GLAI into the Simple Algorithm for Yield Estimation model (SAFY) for winter wheat biomass estimation. GLAI was estimated using the two-band Enhanced Vegetation Index (EVI2) derived from data acquired by the Operational Land Imager (OLI) onboard the Landsat-8 and a fusion dataset generated by blending the Moderate-Resolution Imaging Spectroradiometer (MODIS) data and the OLI data using the STARFM and ESTARFM models. The fusion dataset had the temporal resolution of the MODIS data and the spatial resolution of the OLI data. Key parameters of the SAFY model were optimised through assimilation of the estimated GLAI into the crop model using the Shuffled Complex Evolution-University of Arizona (SCE-UA) algorithm. A good agreement was achieved between the estimated and field measured biomass by assimilating the GLAI derived from the OLI data (GLAI_L) alone (R² = 0.77 and RMSE = 231 g m⁻²). Assimilation of GLAI derived from the fusion dataset (GLAI_F) resulted in a R² of 0.71 and RMSE of 193 g m⁻² while assimilating the combination of GLAI_L and GLAI_F led to further improvements (R² = 0.76 and RMSE = 176 g m⁻²). Our results demonstrated the potential of using the fusion algorithms to improve crop growth monitoring and crop productivity estimation when the number of high resolution remote sensing data acquisitions is limited.     

Soil respiration mapped by exclusively use of MODIS data for forest landscapes of Saskatchewan,Canada

Soil respiration (R_s) is of great importance to the global carbon balance. Remote sensing of R_s is challenging because of (1) the lack of long-term R_s data for model development and (2) limited knowledge of using satellite-based products to estimate R_s. Using 8-years (2002–2009) of continuous R_s measurements with nonsteady-state automated chamber systems at a Canadian boreal black spruce stand (SK-OBS), we found that R_s was strongly correlated with the product of the normalized difference vegetation index (NDVI) and the nighttime land surface temperature (LSTn) derived from Moderate Resolution Imaging Spectroradiometer (MODIS) imagery. The coefficients of the linear regression equation of this correlation between R_s and NDVI × LSTn could be further calibrated using the MODIS leaf area index (LAI) product, resulting in an algorithm that is driven solely by remote sensing observations. Modeled R_s closely tracked the seasonal patterns of measured R_s and explained 74–92% of the variance in R_s with a root mean square error (RMSE) less than 1.0 g C/m²/d. Further validation of the model from SK-OBS site at another two independent sites (SK-OA and SK-OJP, old aspen and old jack pine, respectively) showed that the algorithm can produce good estimates of R_s with an overall R² of 0.78 (p < 0.001) for data of these two sites. Consequently, we mapped R_s of forest landscapes of Saskatchewan using entirely MODIS observations for 2003 and spatial and temporal patterns of R_s were well modeled. These results point to a strong relationship between the soil respiratory process and canopy photosynthesis as indicated from the greenness index (i.e., NDVI), thereby implying the potential of remote sensing data for detecting variations in R_s. A combination of both biological and environmental variables estimated from remote sensing in this analysis may be valuable in future investigations of spatial and temporal characteristics of R_s.