The structure of zooplankton communities,in the 2 to 2000 μm size range,in the Arabian Sea during and after the SW monsoon, 1994

Zooplankton communities, studied in the surface mixed layer on a 1600 m transect across the Arabian Sea, were found to differ in their temporal and spatial response to seasonal forcing. The transect studied, spanned seasonally eutrophic upwelling, mesotrophic downwelling and aseasonal oligotrophic waters. The nano- and microzooplankton communities constituted a relatively constant compartment in the tropical monsoon ecosystem, whilst the mesozooplankton showed a clear response to both upwelling and season. The heterotrophic nanoflagellates were concentrated in the surface mixed layer, except in the eutrophic upwelling waters of the SW monsoon. They reached maximum cell concentrations of 855 ml^-1 during the SW monsoon and a maximum biomass of 8.4 mg C m^-3 during the intermonsoon. Nanozooplankton standing stocks, in the surface mixed layer, ranged between 7 and 333 mg C m^-2, with highest stocks found during the intermonsoon. The microzooplankton community was dominated by Protozoa, particularly aloricate ciliates and heterotrophic dinoflagellates, which accounted for up to 99% in terms of numbers and up to 71% of the biomass. Sarcodines and metazoan nauplii were recorded in lower numbers (<400 l^-1). The microzooplankton were also concentrated in the surface mixed layer during both periods, except in the eutrophic coastal waters during the SW monsoon, when relatively high biomass values were found below the mixed layer depth. Their standing stocks, in the surface mixed layer, ranged between 50 and 182 mg C m^-2, with the highest concentration found in the mesotrophic offshore waters during the late monsoon period. Total mesozooplankton standing stocks, in the surface 100 m, decreased with distance from the coastal to offshore waters and between seasons, decreasing from 1248 to 238 mg C m^-2 during the late SW monsoon and 656–89 mg C m^-2 during the following intermonsoon. The largest size class, of 1000–2000 μm sized organisms, dominated throughout except at the oligotrophic station during the intermonsoon period, when the smallest class, of 200–500 μm, were more important. The shift in size structure from large to small zooplankton occurred in response to a shift in dominance from large to small phytoplankton cells both spatially, along a eutrophic–oligotrophic gradient, and seasonally. These responses are a result of the physical forcing associated with the monsoon seasons in the Arabian Sea.     

2008年夏季南海北部海区生物光学特性的垂向变化特征

Vertical variability in the bio-optical properties of seawater in the northern South China Sea(NSCS) including inherent optical properties(IOPs) and chlorophyll a concentration(Chl) were studied on the basis of in situ data collected in summer 2008 using an absorption/attenuation spectrophotometer. An empirical model was developed to estimate Chl profiles based on the absorption line height at long wavelengths, with a relative root mean square error of 37.03%. Bio-optical properties exhibited large horizontal and vertical spatial variability. As influenced by coastal upwelling and the Zhujiang River(Pearl River) discharge, both IOPs and Chl exhibited high values in the surface waters of the inner shelf, which tended to decrease with distance offshore. Subsurface maximum layers of IOPs and Chl were observed in the middle and outer shelf regions, along with significantly higher values of attenuation coefficients beneath this layer that rapidly increased towards the bottom. In the open ocean, both IOPs and Chl exhibited consistent variability, with the subsurface maximum layer typically located at34–84 m. Phytoplankton were found to be one of the major components in determining the vertical variability of bio-optical properties, with their vertical dynamics influenced by both physical forcing and light attenuation effects. The depth of the subsurface maximum layer was found to be closely related to the fluctuation of the oceanic thermocline and the depth of the euphotic zone, which also affected the total integrated biomass of the upper ocean. Typically high values of attenuation coefficients observed in the bottom waters of the continental shelf reflected the transport of particulate matter over the bottom boundary layer. Our results reveal large spatial differences in bio-optical profiles in response to complex marine ecodynamics in the NSCS. From the perspective of marine research, high-resolution optical measurements are clearly advantageous over conventional bottle sampling.     

Phytoplankton community structure in the Arabian Sea during and after the SW monsoon, 1994

Diatoms, dinoflagellates, coccolithophores, nanoflagellates, picophytoplankton and procaryote algae (Synechococcus spp. and prochlorophytes) were quantified by microscopy and flow cytometry, and their biomass determined, at 12 stations along a 1600 km transect across the Arabian Sea at the end of the SW monsoon in September, and during the inter-monsoon period of November/December 1994. The transect spanned contrasting oceanic conditions that varied from seasonally eutrophic, upwelling waters through mesotrophic, downwelling waters to permanently oligotrophic, stratified waters. The overall diversity of diatoms, dinoflagellates and coccolithophores along the transect was not significantly different between the SW monsoon and inter-monsoon. However, diatoms showed greatest diversity during the SW monsoon and coccolithophores were most diverse during the inter-monsoon. Integrated phytoplankton standing stocks during the SW monsoon ranged from 3 to 9 g C m^-2 in the upwelling eutrophic waters, from 3 to 5 g C m^-2 in downwelling waters, and from 1 to 2 g C m^-2 in oligotrophic waters. Similar phytoplankton standing stocks were found in oligotrophic waters during the inter-monsoon, but were ca. 40% lower compared to the SW monsoon in the more physically dynamic waters. Phytoplankton abundance and biomass was dominated by procaryote taxa. Synechococcus spp. were abundant (often >10⁸ cells l^-1) during both the SW monsoon and inter-monsoon, where the nitrate concentration was ⩾0.1 μ mol l^-1, and often dominated the phytoplankton standing stocks. Prochlorophytes were restricted to oligotrophic stratified waters during the SW monsoon period but were found at all stations along the transect during the inter-monsoon, dominating the phytoplankton standing stocks (>40%) in the oligotrophic region during this period. Of the nano- and micro-phytoplankton, only diatoms contributed significantly to phytoplankton standing stocks, and then only in near-shore upwelling waters during the SW monsoon. There were significant changes in the temporal composition of the phytoplankton community. In nearshore waters a mixed community of diatoms and Synechococcus spp. dominated during the SW monsoon. This gave way to a community dominated by Synechococcus spp. in the intermonsoon. In the downwelling zone, a Synechococcus spp. dominated community was replaced by a mixed procaryote community of Synechococcus spp. and prochlorophytes. In the oligotrophic stratified waters, the mix of procaryote algae was replaced by one dominated by prochlorophytes alone.     

Seasonal variations in the distribution of Fe and Al in the surface waters of the Arabian Sea

Concentrations of dissolved Al and Fe in the surface mixed layer were measured during five cruises of the 1995 US JGOFS Arabian Sea Process Study, Concentrations of both Al and Fe were relatively uniform between January and April, the NE Monsoon and the Spring Intermonsoon period, ranging from 2 to 11 nM Al (mean 5.3 nM) and 0.5 to 2.4 nM Fe (mean 1.0 nM). In July/August, after the onset of the SW Monsoon, surface water Al and Fe concentrations increased significantly (Al range 4.5–20.1 nM; mean=10 nM, Fe range 0.57–2.4 nM; mean=1.3 nM), particularly in the NE part of the Arabian Sea, as the result of the input and partial dissolution of eolian dust. Using the enrichment of Al in the surface waters, we estimate this is the equivalent to the deposition of 2.2–7.4 g m⁻² dust, which is comparable to values previously estimated for this region. Approximately one month later (August/September), surface water concentrations of both Al and Fe were found to have decreased significantly (mean Al 7.4 nM, mean Fe 0.90 nM) particularly in the same NE region, as the result of export of particulate material from the euphotic zone. Fe supply to the surface waters is also affected by upwelling of sub-surface waters in the coastal region of the Arabian Sea during the SW Monsoon. Despite the proximity of high concentrations of Fe in the shallow sub-oxic layer, freshly upwelled water is not drawn from this layer and the NO₃/Fe ratio in the initially upwelled water is below the value at which Fe limitation is through to occur. Continued deposition of eolian Fe into the upwelled water as it advects offshore provides the Fe required to raise this ratio above the Fe limitation value.     

Seasonal variability of primary production in the Cap-Ferret Canyon area (Bay of Biscay) during the ECOFER cruises

Primary production measurements were carried out during the five ECOFER cruises, in order to estimate the autochtonous contribution to particulate fluxes collected at two mooring sites, in the Cap-Ferret Canyon, from June 1989 to August 1991. Primary production rates are reported in relation to levels of chlorophyll and nitrogenous nutrients in the euphotic zone. Except in early spring, the water column remains stratified until the beginning of autumn surface-water cooling. During the stratified period, maximal chlorophyll concentrations were recorded at the bottom of the photic zone, near the 1% light depth, close to the nitracline; concentrations in some profiles were greater than those measured in surface waters during the early spring bloom. From June to October, a mean daily production of 0.4 g C m⁻² may be used to estimate particulate fluxes, because the recorded variability was low. During April and May, mean daily production rates can be about 3–4 times higher. Extrapolation of our data gives an estimate of yearly production from 145 to 170 g C m⁻² yr⁻¹. The possibility of greater production rates, under stratified conditions, is discussed taking into account the occurrence of changes in the depth of the chlorophyll maximum during the day; such vertical movements could be caused by internal waves, particularly at the shelf break.     

Monsoonal influence on the distribution of phytoplankton pigments in the Arabian Sea

Variations in the distribution of chemotaxonomic pigments were monitored in the Arabian Sea and the Gulf of Oman at the end of the SW monsoon in September 1994 and during the inter-monsoon period in November/December 1994 to determine the seasonal changes in phytoplankton composition. The Gulf of Oman was characterized by sub-surface chlorophyll maxima at 20-40 m during both seasons, and low levels of divinyl chlorophyll a indicated that prochlorophytes did not contribute significantly to the total chlorophyll a. Prymnesiophytes (19′-hexanoyloxyfucoxanthin), diatoms (fucoxanthin) and chlorophyll b containing organisms accounted for most of the phytoplankton biomass in September, while prymnesiophytes dominated in November/December. In the Arabian Sea in September, high total chlorophyll a concentrations up to 1742 ng l^-1 were measured in the coastal upwelling region and a progressive decline was monitored along the 1670 km offshore transect to oligotrophic waters at 8°N. Divinyl chlorophyll a was not detected along this transect except at the two most southerly stations where prochlorophytes were estimated to contribute 25–30% to the total chlorophyll a. Inshore, the dominance of fucoxanthin and/or hexanoyloxyfucoxanthin indicated that diatoms and prymnesiophytes generally dominated the patchy phytoplankton community, with zeaxanthin-containing Synechococcus also being important, especially in surface waters. At the southern oligotrophic localities, Synechococcus and prochlorophytes dominated the upper 40 m and prymnesiophytes were the most prominent at the deep chlorophyll maximum. During the inter-monsoon season, total chlorophyll a concentrations were generally half those measured in September and highest levels were found on the shelf (1170 ng l^-1). Divinyl chlorophyll a was detected at all stations along the Arabian Sea transect, and we estimated that prochlorophytes contributed between 3 and 28% to the total chlorophyll a, while at the two oligotrophic stations this proportion increased to 51–52%. While procaryotes were more important in November/December than September, eucaryotes still accounted for >50% of the total chlorophyll a. Pigment/total chlorophyll a ratios indicated that 19′-hexanoyloxyfucoxanthin-containing prymnesiophytes were the dominant group, although procaryotes accounted for 65% at the two southerly oligotrophic stations.     

The influence of the south-west monsoon upon the nutrient biogeochemistry of the Arabian Sea

Variations in the nutrient concentrations were studied during two cruises to the Arabian Sea. The situation towards the end of the southwest monsoon season (September/October 1994) was compared with the inter-monsoonal season during November and December 1994. Underway surface transects showed the influence of an upwelling system during the first cruise with deep, colder, nutrient-rich water being advected into the surface mixed layer. During the southwesterly monsoon there was an area of coastal Ekman upwelling, bringing colder water (24.2°C) into the surface waters of the coastal margin. Further offshore at about 350 km there was an area of Ekman upwelling, as a result of wind-stress curl, north of the Findlater Jet axis; this area also had cooler surface water (24.6°C). Further offshore (>1000 km) the average surface temperatures increased to >27°C. These waters were oligotrophic with no evidence of the upwelling effects observed further inshore. In the upwelling regions nutrient concentrations in the close inshore coastal zone were elevated (NO₃=18 μmol l^-1, PO₄=1.48 μmol l^-1); higher concentrations also were measured at the region of offshore upwelling off the shelf, with a maximum nitrate concentration of 12.5 μmol l^-1 and a maximum phosphate concentration of 1.2 μmol l^-1. Nitrate and phosphate concentrations decreased with increasing distance offshore to the oligotrophic waters beyond 1400 km, where typical nitrate concentrations were 35.0 nmol l^-1 (0.035 μmol l^-1) in the surface mixed layer. A CTD section from the coastal shelf, to 1650 km offshore to the oligotrophic waters, clearly showed that during the monsoon season, upwelling is one of the major influences upon the nutrient concentrations in the surface waters of the Arabian Sea off the coast of Oman. Productivity of the water column was enhanced to a distance of over 800 km offshore. During the intermonsoon period a stable surface mixed layer was established, with a well-defined thermocline and nitracline. Surface temperature was between 26.8 and 27.4°C for the entire transect from the coast to 1650 km offshore. Nitrate concentrations were typically between 2.0 and 0.4 μmol l^-1 for the transect, to about 1200 km where the waters became oligotrophic, and nitrate concentrations were then typically 8–12 nmol l^-1. Ammonia concentrations for the oligotrophic waters were typically 130 nmol l^-1, and are reported for the first time in the Indian Ocean. The nitrogen/phosphorus (N/P) ratios suggest that phytoplankton production was potentially nitrogen-limited in all the surface waters of the Arabian Sea, with the greatest nitrogen limitation during the intermonsoon period.     

Some characteristics of Yakutat Eddies propagating along the continental slope of the northern Gulf of Alaska

Data from array for real-time geostrophic oceanography (ARGO) profiling floats, oil tanker thermosalinographs, shipboard ADCP and towed-CTD surveys, and satellite altimetry are used to examine properties of two ∼200 km diameter, anticyclonic Yakutat Eddies that propagated westward at ∼1.5 km day⁻¹ along the continental slope of the northern Gulf of Alaska (GOA) in 2001 and 2003. The eddies had lifetimes of up to 5 years, remained close to the shelfbreak, and had relatively constant size and strength until they encountered the Alaskan Stream where they appeared to spawn smaller, shorter-lived anticyclones. The azimuthal velocity field was vigorous (25–40 cm s⁻¹) and in gradient wind balance with Rossby numbers of ∼0.05. Conservation of salt and azimuthal mass transports (between 20 m and the depth of the 32.2 isohaline) from shipboard surveys in May and August 2003 suggest little mass exchange occurred between the surface layers of the eddy and ambient waters. Chlorophyll concentrations were greater in the eddy than in ambient waters in both May and August. In May, the chlorophyll was patchily distributed, while in August dense chlorophyll concentrations occurred in and beneath the seasonal thermocline within 50 km of the eddy center. The high August chlorophyll concentrations might have been fostered by a broad and shallow (<∼150 m) upwelling of the eddy center between May and August.It appears likely that as Yakutat Eddies approach the shelfbreak non-linear processes will modify the slope flow field (and the stability and structure of the shelfbreak front), leading to cross-slope flows and flow reversals. This interaction may induce ∼30 km-wide streamers of shelf water to flow around the trailing edge of the anticyclone. The role of streamers in the freshwater and nutrient budgets of the GOA shelf and basin is unknown, but their contribution to these budgets will depend on the trajectory of a Yakutat Eddy, especially its proximity to the shelfbreak as the eddy propagates along the GOA continental slope.     

Structure of potential upwelling areas in the Philippines

The three-dimensional structure of two potential mesoscale upwelling areas that are located in the external waters of the Philippine archipelago (i.e. northwest of Luzon and east of Mindanao) were constructed by analysis of historical data. A unique characteristic of both upwelling sites is that they can be identified by their anomalously cold subsurface temperatures rather than sea surface temperature distributions. As such, they cannot be observed in sea surface temperature fields derived by satellite imagery. The data used in the analysis were obtained from the National Oceanographic Data Center hydrographic database. Objective analysis was performed to produce monthly temperature fields at several standard depths within the upper 500 m of the region 0–30°N and 100–140°E with a horizontal grid resolution of 0.5°. The extent and timing of these upwelling areas are described. A review of existing hypothesis on the mechanisms for their evolution and seasonal modulation are presented. The change in heat content during the upwelling season is greater than 300 W m⁻² in both areas. Based on the excursion of isotherms, vertical velocities of 83 cm day⁻¹ and 26 cm day⁻¹ were obtained for upwelling northwest of Luzon and east of Mindanao, respectively.     

Ectoenzymatic activity in surface waters: A transect from the Mediterranean Sea across the Indian Ocean to Australia

The activities of two hydrolytic enzymes (leucine aminopeptidase and β glucosidase), belonging to the particle-bound enzymatic fraction, were measured in open-sea surface waters. Samples were collected along a transect crossing the Indian Ocean during the early NW monsoon period (November and December 2001). The latitudinal pattern of the ectoenzymatic activities highlighted a generally increasing trend of glycolysis approaching the equator, with significantly higher β glucosidase activity (0.79–3.00 nmol l⁻¹ h⁻¹) within the latitudinal range from 12°N to 16°S. In this area, the surface waters coming from the Indonesian Throughflow and the Bay of Bengal carry a considerable quantity of carbohydrates (38.9–41.9 μg l⁻¹), which stimulated glycolytic activity and its cell-specific rates scaled to bacterial abundance. On the other hand, in the Central Indian Ocean, the proteolytic activity was considerable (0.91–2.03 nmol l⁻¹ h⁻¹), although the particulate proteins did not show significant increases and the dissolved proteinlike signal was one of the lowest of the entire transect (0.7 mg l⁻¹ on average compared to the 1.4–1.6 mg l⁻¹ of the adjacent areas). Therefore, in this area, the two ectoenzymes studied did not respond to the same stimulatory effect (namely the specific substrate concentrations). The time needed for the hydrolysis of macromolecules within the particulate and dissolved organic substrate fractions, although these measures are affected by a number of assumptions starting with the potential nature of the ectoenzymatic determinations, confirms these observations. The Central Indian Ocean displayed the lowest values, from 8 to 26 days for particulate and dissolved organic carbon, respectively. As observed in the equatorial areas of the Atlantic Ocean, the relevant degradation activity of the central area of the Indian Ocean Basin suggests a notable heterotrophy based on a faster turnover of organic substrates.     

Basin-scale variability of phytoplankton biomass,production and growth in the Atlantic Ocean

The latitudinal distributions of phytoplankton biomass, composition and production in the Atlantic Ocean were determined along a 10,000-km transect from 50°N to 50°S in October 1995, May 1996 and October 1996. Highest levels of euphotic layer-integrated chlorophyll a (Chl a) concentration (75–125 mg Chl m⁻²) were found in North Atlantic temperate waters and in the upwelling region off NW Africa, whereas typical Chl a concentrations in oligotrophic waters ranged from 20 to 40 mg Chl m⁻². The estimated concentration of surface phytoplankton carbon (C) biomass was 5–15 mg C m⁻² in the oligotrophic regions and increased over 40 mg C m⁻² in richer areas. The deep chlorophyll maximum did not seem to constitute a biomass or productivity maximum, but resulted mainly from an increase in the Chl a to C ratio and represented a relatively small contribution to total integrated productivity. Primary production rates varied from 50 mg C m⁻² d⁻¹ at the central gyres to 500–1000 mg C m⁻² d⁻¹ in upwelling and higher latitude regions, where faster growth rates (μ) of phytoplankton (>0.5 d⁻¹) were also measured. In oligotrophic waters, microalgal growth was consistently slow [surface μ averaged 0.21±0.02 d⁻¹ (mean±SE)], representing <20% of maximum expected growth. These results argue against the view that the subtropical gyres are characterized by high phytoplankton turnover rates. The latitudinal variations in μ were inversely correlated to the changes in the depth of the nitracline and positively correlated to those of the integrated nitrate concentration, supporting the case for the role of nutrients in controlling the large-scale distribution of phytoplankton growth rates. We observed a large degree of temporal variability in the phytoplankton dynamics in the oligotrophic regions: productivity and growth rates varied in excess of 8-fold, whereas microalgal biomass remained relatively constant. The observed spatial and temporal variability in the biomass specific rate of photosynthesis is at least three times larger than currently assumed in most satellite-based models of global productivity.     

Distributions of particulate and dissolved organic and inorganic phosphorus in North Pacific surface waters

Several operationally defined fractions of phosphorus (P) were measured along a surface water transect in the North Pacific. The P content in all fractions was found to increase northward from the edge of the subtropical to the subarctic region. Particulate organic P (POP) concentrations increased from 9 to 110 nmol L^− 1, whereas the particulate inorganic P (PIP) concentrations increased from 1 to 13 nmol L^− 1. A significant correlation between POP, PIP and chlorophyll a suggested that these P pools are associated directly or indirectly with phytoplankton cells. PIP comprised 10–20% of the total particulate P pool across the transect, indicating it is an important component of the marine P cycle in this region. Dissolved non-reactive P (assumed to consist predominantly of non-reactive organic P compounds, thus referred to as DOP) concentration increased from 0.10 to 0.22 μmol L^− 1, whereas soluble reactive P (SRP) concentration increased from 0.01 to 1.42 μmol L^− 1 along the transect. The proportion of DOP and SRP varied widely, with a large proportion of DOP in areas with low total dissolved P concentrations in lower latitudes and a large proportion of SRP in areas with high total dissolved P concentrations in higher latitudes. High demand for DOP in the lower latitudinal region would diminish the concentration of this pool relative to higher latitudinal regions where SRP is more abundant and would be preferentially utilized. The availability of SRP could have a significant impact on the concentration and probably on the composition of DOP. We show that P fractionation provides an important insight for discussing the marine P cycle.     

The physical structure of a cold filament in a Chilean upwelling zone (Penı&#x0301;nsula de Mejillones,Chile, 23°S)

Cold filaments associated with Eastern Boundary Currents are typically narrower than 100 km but can be several hundred kilometers long, extending from the coast to the open ocean in upwelling areas. One such structure, observed off Penı&#x0301;nsula de Mejillones (23°S, Chile), was studied with both satellite images and two 5-days hydrographic cruises carried out during January 1997. The study used a coastal grid of 31 stations in an area of 165 ×155 km², approximately. The spatial distribution of the filament and its change between cruises are described from the horizontal distributions of dynamic height, temperature, salinity and dissolved oxygen. The filament was a shallow feature (thickness <100 m) and extended at least 165 km toward the open ocean. A meandering northward current flowed at the borders of the filament, separating oceanic and coastal waters of different physical properties. Comparisons of cross sections of the filament near the coast and in the oceanic zone show the ascent of the shallow salinity minimum (SSM), and its extension toward the ocean, bound to the filament. It is concluded that Subantarctic Water ((SAAW) distinguish by low salinity, high dissolved oxygen) and Equatorial Subsurface Water ((ESSW) high salinity, low dissolved oxygen, high nutrient content) form this filament, and that their relative proportions depend on the strength of the coastal upwelling. Thus, the knowledge of the dynamics of these structures is fundamental to better understanding of the spatial distribution of important biological variables, such as nutrients and chlorophyll, in the coastal ecosystem.     

Occurrence and turnover of DMSP and DMS in deep waters of the Ross Sea,Antarctica

High concentrations of the phytoplankton metabolite dimethylsulfoniopropionate (DMSP) and its degradation product dimethylsulfide (DMS) are associated with blooms of Phaeocystis antarctica in the Ross Sea, Antarctica. Episodic and rapid vertical export of Phaeocystis biomass to deep water has been reported for the Ross Sea, therefore we examined the distribution and microbial consumption rates of DMSP and DMS throughout the sub-euphotic water column. Total DMSP (dissolved+particulate; DMSPt) was present at 0.5–22 nM at depths between 70 and 690 m during both the early bloom (November) and the late bloom (January). Sub-euphotic peaks of DMSP were sometimes associated with mid-water temperature maxima, and elevated DMSP below 70 m was found mainly in water masses characterized as Modified Circumpolar Deep Water or Antarctic Shelf Water. Overall, 50–94% of the integrated water-column DMSPt was found below the euphotic zone. At one station during the early bloom, local maxima of DMSPt (14 nM) and DMS (20 nM) were observed between 113 and 240 m and these maxima corresponded with high chlorophyll a concentrations, P. antarctica cell numbers, and Fv/Fm (the quantum yield of photosystem II). During the late bloom, a sub-euphotic maximum of DMSPt (15.8 nM) at 250 m cooccurred with peaks of chlorophyll a concentration, DMSP lyase activity, bacterial production and dissolved DMSP consumption rates. DMSP turnover contributed ～12% of the bacterial carbon demand between 200 and 400 m. DMS concentrations peaked at 286 m but the maximum concentration (0.42 nM) was far lower than observed during the early bloom, probably because of relatively rapid biological consumption of DMS (1–3 turnovers per day) which, in turn, contributed to elevated dissolved dimethylsulfoxide (DMSO) concentrations. Relatively stable DMSPt distributions at some sites suggest that rapid sinking of Phaeocystis biomass is probably not the major mechanism responsible for mesopelagic DMSP accumulations. Rather, subduction of near-surface water masses, lateral advective transport or trapping of slowly sinking P. antarctica biomass in intermediate water masses are more likely mechanisms. We found that a culture of P. antarctica maintained cellular integrity during 34 days of darkness, therefore the presence of intact cells (and DMSP) at depth can be explained even under a slow sinking/advection scenario. Whatever the mechanism, the large pools of DMSP and DMS below the euphotic zone suggest that export exerts a control on potential DMS emission from the surface waters of the Ross Sea.     

Biogeography and phenology of satellite-measured phytoplankton seasonality in the California current

Thirteen years (1998–2010) of satellite-measured chlorophyll a are used to establish spatial patterns in climatological phytoplankton biomass seasonality across the California Current System (CCS) and its interannual variability. Multivariate clustering based on the shape of the local climatological seasonal cycle divides the study area into four groups: two with spring-summer maxima representing the northern and southern coastal upwelling zones, one with a summer minimum offshore in mid-latitudes and a fourth with very weak seasonality in between. Multivariate clustering on the seasonal cycles from all 13 years produces the same four seasonal cycle types and provides a view of the interannual variability in seasonal biogeography. Over the study period these seasonal cycles generally appear in similar locations as the climatological clusters. However, considerable interannual variability in the geography of the seasonal cycles is evident across the CCS, the most spatially extensive of which are associated with the 1997–1999 El Niño-Southern Oscillation (ENSO) signal and the 2005 delayed spring transition off the Oregon and northern and central California coasts. We quantify linear trends over the study period in the seasonal timing of the two seasonal cycles that represent the biologically productive coastal upwelling zones using four different metrics of phenology. In the northern upwelling region, the date of the spring maximum is delaying (1.34 days yr⁻¹) and the central tendency of the summer elevated chlorophyll period is advancing (0.63 days yr⁻¹). In the southern coastal upwelling region, both the initiation and cessation of the spring maximum are delaying (1.78 days yr⁻¹ and 2.44 days yr⁻¹, respectively) and the peak is increasing in duration over the study period. Connections between observed interannual shifts in phytoplankton seasonality and physical forcing, expressed as either basin-scale climate signals or local forcing, show phytoplankton seasonality in the CCS to be influenced by changes in the seasonality of the wind mixing power offshore, coastal upwelling in the near-shore regions and basin-scale signals such as ENSO across the study area.     

Fate of biogenic carbon in the upper 200 m of the central Greenland Sea

Sedimentation of particulate carbon from the upper 200–300 m in the central Greenland Sea from August 1993 to June 1995 was less than 2 g C m⁻² yr⁻¹. Daily rates of sedimentation of particulate organic carbon reached highest values of about 18 mg m⁻² d⁻¹ in fall 1994. For total particulate material, maximum rates of sedimentation of about 250 mg m⁻² d⁻¹ were recorded in spring and fall 1994. For chlorophyll equivalent, highest rates of sedimentation of about 140 μg m⁻² d⁻¹ were recorded in spring 1994. As reported in related investigations, the transient accumulation of DOC in surface waters during summer, as well as respiration and mortality of deep overwintering zooplankton stocks, appeared to dominate the fate of photosynthetically fixed organic carbon. The above processes may account for roughly 43 g C m⁻² in the upper 200 m of the central Greenland Sea. For comparison, the seasonal deficit in dissolved inorganic carbon was reported to be about 23 g C m⁻² in the upper 20 m of surface water, and estimates for new annual production were reported to be about 57 g C m⁻². In our investigation, the biological carbon pump was not unusually effective in transporting carbon out of the productive surface layer.     

Implementation of European marine policy: New water quality targets for German Baltic waters

A full re-calculation of Water Framework Directive reference and target concentrations for German coastal waters and the western Baltic Sea is presented, which includes a harmonization with HELCOM Baltic Sea Action Plan (BSAP) targets. Further, maximum allowable nutrient inputs (MAI) and target concentrations in rivers for the German Baltic catchments are suggested. For this purpose a spatially coupled, large scale and integrative modeling approach is used, which links the river basin flux model MONERIS to ERGOM-MOM, a three-dimensional ecosystem model of the Baltic Sea. The years around 1880 are considered as reference conditions reflecting a high ecological status and are reconstructed and simulated with the model system. Alternative approaches are briefly described, as well. For every WFD water body and the open sea, target concentrations for nitrogen and phosphorus compounds as well as chlorophyll a are provided by adding 50% to the reference concentrations. In general, the targets are less strict for coastal waters and slightly stricter for the sea (e.g. 1.2 mg/m³ chl.a summer average for the Bay of Mecklenburg), compared to current values. By taking into account the specifics of every water body, this approach overcomes the inconsistencies of earlier approaches. Our targets are well in agreement with the BSAP targets, but provide spatially refined and extended results. The full data are presented in Appendix A1 and A2.To reach the targets, German nitrogen inputs have to be reduced by 34%. Likely average maximum allowable concentrations in German Baltic rivers are between 2.6 and 3.1 mg N/l. However, the concrete value depends on the scenario and uncertainties with respect to atmospheric deposition. To our results, MAI according to the BSAP may be sufficient for the open sea, but are not sufficient to reach a good WFD status in German coastal waters.     

Nutrient and phytoplankton dynamics off the west coast of Vancouver Island during the 1997/98 ENSO event

Six research cruises were conducted off the west coast of Vancouver Island between April and October of 1997 and 1998 as part of the Canadian GLOBEC project to compare nutrient and phytoplankton dynamics between ENSO (1997) and non-ENSO (1998) years. Limited sampling also was conducted during three cruises in 1999. During the 1997 ENSO period, there was a shallow thermocline (∼10 m) that resulted in a shallower mixed layer, lower salinity and density, and stronger summer stratification. In general on the shelf, the 1997 growing season was characterized by higher nitrate (7.5 μM) and silicic acid (17 μM) concentrations, lower total chlorophyll (∼76 mg m⁻²), lower phytoplankton carbon biomass (0.2 mg C L⁻¹), and lower diatom abundance and biomass than in 1998. Phytoplankton assemblages were dominated by nanoplankton in 1997 and by diatoms in 1998. These results suggest that the 1997 ENSO was responsible for a reduction in the growth and biomass of larger phytoplankton cells. In mid-1998, the hydrographic characteristics off the west coast of Vancouver Island changed suddenly. The 1997 poleward transport of warm water reversed to an equatorward transport of coastal water in July 1998, which was accompanied by normal summer upwelling. During 1998, a large diatom bloom (mainly dominated by Chaetoceros debilis, Leptocylindrus danicus and to a lesser extent by Skeletomema and Pseudo-nitzschia sp.) was observed in July over the continental shelf. This large bloom resulted in chlorophyll concentrations of up to 400 mg m⁻², primary productivity of up to 11 g C m⁻² d⁻¹, and near undetectable dissolved nitrogen concentrations at some of the shelf stations in 1998. In contrast, during 1997, the sub-tropical waters that were advected over the slope, resulted in low chlorophyll a and primary productivity (generally <1 g C m⁻² d⁻¹). Therefore, there was a sharp contrast between the very high primary productivity on the shelf in July 1998, due to normal nutrient replenishment from summer upwelling and outflow from the Strait of Juan de Fuca, and the lower primary productivity during the 1997 ENSO year. During 1998, non-ENSO conditions resulted in phytoplankton biomass that was twice as high on the shelf as that measured in regions beyond the continental shelf of the west coast of Vancouver Island.     

Factors influencing particulate lipid production in the East Atlantic Ocean

Extensive analyses of particulate lipids and lipid classes were conducted to gain insight into lipid production and related factors along the biogeochemical provinces of the Eastern Atlantic Ocean. Data are supported by particulate organic carbon (POC), chlorophyll a (Chl a), phaeopigments, Chl a concentrations and carbon content of eukaryotic micro-, nano- and picophytoplankton, including cell abundances for the latter two and for cyanobacteria and prokaryotic heterotrophs. We focused on the productive ocean surface (2 m depth and deep Chl a maximum (DCM)). Samples from the deep ocean provided information about the relative reactivity and preservation potential of particular lipid classes. Surface and DCM particulate lipid concentrations (3.5–29.4 μg L⁻¹) were higher than in samples from deep waters (3.2–9.3 μg L⁻¹) where an increased contribution to the POC pool was observed. The highest lipid concentrations were measured in high latitude temperate waters and in the North Atlantic Tropical Gyral Province (13–25°N). Factors responsible for the enhanced lipid synthesis in the eastern Atlantic appeared to be phytoplankton size (micro, nano, pico) and the low nutrient status with microphytoplankton having the most expressed influence in the surface and eukaryotic nano- and picophytoplankton in the DCM layer. Higher lipid to Chl a ratios suggest enhanced lipid biosynthesis in the nutrient poorer regions. The various lipid classes pointed to possible mechanisms of phytoplankton adaptation to the nutritional conditions. Thus, it is likely that adaptation comprises the replacement of membrane phospholipids by non-phosphorus containing glycolipids under low phosphorus conditions. The qualitative and quantitative lipid compositions revealed that phospholipids were the most degradable lipids, and their occurrence decreased with increasing depth. In contrast, wax esters, possibly originating from zooplankton, survived downward transport probably due to the fast sinking rate of particles (fecal pellets). The important contribution of glycolipids in deep waters reflected their relatively stable nature and degradation resistance. A lipid-based proxy for the lipid degradative state (Lipolysis Index) suggests that many lipid classes were quite resistant to degradation even in the deep ocean.     

CO2 outgassing off central Chile (31–30°S) and northern Chile (24–23°S) during austral summer 1997: the effect of wind intensity on the upwelling and ventilation of CO2-rich waters

The distribution of pH and alkalinity has been used to calculate the distribution of total inorganic carbon (TC) and fugacity of carbon dioxide (fCO₂) in the upper 200 m of the water column in coastal upwelling areas off northern Chile (23–24°S, near Antofagasta) and central Chile (30–31°S, near Coquimbo) during austral summer 1997. In these upwelling areas, colder surface waters were oxygen poor and strongly CO₂ supersaturated (100% near Antofagasta and 200% near Coquimbo), although below the pycnocline the CO₂ supersaturation invariably exceeded 200% in both areas. The larger surface CO₂ supersaturation and outgassing at 30°S were associated with stronger winds that promoted the upwelling of denser water (richer in CO₂) as well as a higher air–sea CO₂ transfer velocity. The consistent decrease in intensity of the southerly winds (as derived from NSCAT scatterometer data) from 30–31°S to 23–24°S suggests a corresponding decline in the intensity of the CO₂ outgassing due to upwelling. Additionally, we suggest here that the intensity of the local upwelling forcing (i.e. alongshore–equatorward winds) plays a role in determining the water mass composition and phytoplankton biomass of the coastal waters. Thus, while deep upwelling of salty and cold water resulted in high fCO₂ (up to 1000 μatm) and very low phytoplankton biomass (chlorophyll a concentration lower than 0.5 mg m⁻³), the shallow upwelling of less salty (e.g. salinity <34.5) and less CO₂-supersaturated water resulted in a higher phytoplankton biomass, which further reduced surface water fCO₂ by photosynthesis.