Ambient iron concentration regulates the sulfate reducing activity in the mangrove swamps of Diwar,Goa, India

In order to test the hypothesis that the ambient iron concentrations could regulate sulfate reducing activity (SRA) in mangrove areas, 10 cm cores were examined from test and reference sites. The test site at Diwar mangrove ecosystem is highly influenced by iron released by the movement of barges carrying iron ore during the non-monsoon seasons and the reference site at Tuvem is relatively pristine. The average iron concentrations were 17.9% (±8.06) at Diwar and 6.3% (±1.5) at Tuvem. Sulfate reducing rates (SRR) ranged from 50.21 to 698.66 nM cm⁻³ d⁻¹ at Tuvem, and from 23.32 to 294.49 nM cm⁻³d⁻¹ in Diwar. Pearson’s correlation coefficients between SRR and environmental parameters showed that at Tuvem, the SRR was controlled by SO₄⁻² (r = 0.498, p < 0.001, n = 60) more than organic carbon (r = 0.316 p < 0.05, n = 60). At Diwar, the SRR was governed by the iron concentrations at an r-value of −0.761 (p < 0.001, n = 60), suggesting that ca.58% of the variation in SRR was influenced negatively by variations in ambient iron concentrations. This influence was more than the positive influence of TOC (r = 0.615, p < 0.001, n = 60). Laboratory experiments to check the influence of iron on SRR also supported our field observations. At an experimental manipulation of 50 ppm Fe³⁺ there was an increase in SRR but at 100 ppm an inhibitory effect was observed. At 1000 ppm Fe³⁺ there was a decrease in the SRR up to 93% of the control. Thus, our study showed that ambient iron concentrations influence SRR negatively at Diwar and counters the positive influence of organic carbon. Consequently, the influence could cascade to other biogeochemical processes in these mangrove swamps, especially the mineralization of organic matter to carbon dioxide by sulfate respiration.     

Petroleum pollution in surface sediments of Daya Bay,South China,revealed by chemical fingerprinting of aliphatic and alicyclic hydrocarbons

Nine surface sediments collected from Daya Bay have been Soxhlet-extracted with 2:1 (v/v) dichloromethane-methanol. The non-aromatic hydrocarbon (NAH) fraction of solvent extractable organic matter (EOM) and some bulk geochemical parameters have been analyzed to determine petroleum pollution of the bay. The NAH content varies from 32 to 276 μg g⁻¹ (average 104 μg g⁻¹) dry sediment and accounts for 5.8–64.1% (average 41.6%) of the EOM. n-Alkanes with carbon number ranging from 15 to 35 are identified to be derived from both biogenic and petrogenic sources in varying proportions. The contribution of marine authigenic input to the sedimentary n-alkanes is lower than the allochthonous input based on the average n-C₃₁/n-C₁₉ alkane ratio. 25.6–46.5% of the n-alkanes, with a mean of 35.6%, are contributed by vascular plant wax. Results of unresolved complex mixture, isoprenoid hydrocarbons, hopanes and steranes also suggest possible petroleum contamination. There is strong evidence of a common petroleum contamination source in the bay.     

Short-term variability of suspended sediment and phytoplankton in Tampa Bay,Florida: Observations from a coastal oceanographic tower and ocean color satellites

We examined short-term phytoplankton and sediment dynamics in Tampa Bay with data collected between 8 December 2004 and 17 January 2005 from optical, oceanographic, and meteorological sensors mounted on a coastal oceanographic tower and from satellite remote sensing. Baseline phytoplankton (chlorophyll-a, Chl) and sediment concentrations (particle backscattering coefficient at 532 nm, bbp(532)) were of the order of 3.7 mg m⁻³ and 0.07 m⁻¹, respectively, during the study period. Both showed large fluctuations dominated by semidiurnal and diurnal frequencies associated with tidal forcing. Three strong wind events (hourly averaged wind speed >8.0 m s⁻¹) generated critical bottom shear stress of >0.2 Pa and suspended bottom sediments that were clearly observed in concurrent MODIS satellite imagery. In addition, strong tidal current or swells could also suspend sediments in the lower Bay. Sediments remained suspended in the water column for 2–3 days after the wind events. Moderate Chl increases were observed after sediment resuspension with a lag time of ˜1–2 days, probably due to release of bottom nutrients and optimal light conditions associated with sediment resuspension and settling. Two large increases in Chl with one Chl > 12.0 mg m⁻³ over ˜2 days, were observed at neap tides. For the study site and period, because of the high temporal variability in phytoplankton and sediment concentrations, a monthly snapshot can be different by −50% to 200% from the monthly “mean” chlorophyll and sediment conditions. The combination of high-frequency observations from automated sensors and synoptic satellite imagery, when available, is an excellent complement to limited field surveys to study and monitor water quality parameters in estuarine environments.     

Bitumen biomarkers in the Mid-Proterozoic Ilímaussaq intrusion, Southwest Greenland - A challenge to the mantle gas theory

GC and GC/MS/MS analysis on rock extracts has shown that the bitumen in the peralkaline Ilímaussaq intrusion, previously assumed to be abiogenic, is biotic in origin. A biotic origin is in accordance with previously published stable carbon isotopic data on bituminous matter in the rocks. The biomarker distribution in the bitumen, including the less common bicadinanes, resembles that of oil seeps on the central West Greenland coast 2200 km farther north, whose source rocks and migration history are relatively well established. We use a recent re-construction of the subsidence and later exhumation of the West Greenland coastal region during the Mesozoic-Cenozoic (Japsen et al., 2006a, b) to anticipate that hydrocarbons migrated from deeper parts of the basin offshore west of Greenland. The rocks of Ilímaussaq were probably more deeply invaded than the surrounding granites due to their higher proportion of corroded minerals, which may explain why bitumen has not been observed elsewhere in the area.Hydrocarbon gases (C1-C5) present in fluid inclusions were also analysed, after having been released by treatment with hydrochloric acid that resulted in an almost complete disintegration of the Ilímaussaq intrusion rocks. The acid extraction method proved generally more efficient than the crushing procedure applied by others, but gave similar results for the chemical composition of the gas (CH₄: 88-97%) and isotopic ratios (δ¹³C₄CH: −1.6 to −5.0‰; δ¹³CC₂H₆: −9.2 to −12.5‰), with the exception of hydrocarbons hosted in quartz, which showed significantly lower isotopic values for methane (Graser et al., 2008). Previous researchers have suggested an abiotic origin for these hydrocarbon gases, but we suggest a biotic origin for the majority of them, not just those in quartz, assuming that the isotopic ratio of the constituents have changed due to loss of gas by diffusion. The assumption of gas loss via diffusion is supported by published studies on micro-fissures in minerals typical of the Ilímaussaq and field investigations showing diffusive loss of gas from the peralkaline Khibina and Lovozero massifs on the Kola Peninsula, Russia, which are, in many respects of mineralogy and hydrocarbon content, similar to the Ilímaussaq intrusion.Both the hydrocarbon gases and bitumen in the Khibina and Lovozero massifs have been cited as prime examples of a deep mantle source, although the carbon isotopic ratio of the bitumen clearly pointed to an organic origin. The trends in carbon isotopic ratio of methane released with time from freshly exposed rocks also supports our hypothesis of ¹³C enrichment of the methane remaining within the rock. Thus, there is good evidence that the hydrocarbons in the Kola alkaline massifs are mostly biotic in origin, in which case the probability of finding economic hydrocarbon accumulations from a deep mantle source seems exceedingly small.     

Isotopic and elemental indicators of nutrient sources and status of coastal habitats in the Caribbean Sea,Yucatan Peninsula,Mexico

Nutrient inputs associated with coastal population growth threaten the integrity of coastal ecosystems around the globe. In order to assess the threat posed by rapid growth in tourism, we analyzed the nutrient concentrations as well as the δ¹⁵N of NO₃⁻ and macrophytes to detect wastewater nitrogen (N) at 6 locations along a groundwater-dominated coastal seagrass bed on the Caribbean coast of Mexico. We predicted that locations with greater coastal development would have higher concentrations of dissolved inorganic nitrogen (DIN) and phosphorus (P), as well as δ¹⁵N of NO₃⁻, reflecting wastewater sources of N. However, concentrations of NO₃⁻ were not significantly different between developed (3.3 ± 5.3 μM NO₃⁻) and undeveloped (1.1 ± 0.7 μM) marine embayments. The most important control on DIN concentration appeared to be mixing of fresh and salt water, with DIN concentrations negatively correlated with salinity. The δ¹⁵N of NO₃⁻ was elevated at an inland pond (7.0 ± 0.42‰) and a hydrologically-connected tide pool (7.6 ± 0.57‰) approximately 1 km downstream of the pond. The elevated δ¹⁵N of NO₃⁻ at the pond was paralleled by high δ¹⁵N values of Cladophora sp., a ubiquitous green alga (10 ± 1‰). We hypothesize that inputs of nitrogen rich (NO₃⁻ > 30 μM) groundwater, characterized by ¹⁵N enriched signatures, flow through localized submarine groundwater discharges (SGD) and contribute to the elevated δ¹⁵N signatures observed in many benthic macrophytes. However, changes in nitrogen concentrations and isotope values over the salinity gradient suggest that other processes (e.g. denitrification) could also be contributing to the ¹⁵N enrichments observed in primary producers. More measurements are needed to determine the relative importance of nitrogen transformation processes as a source of ¹⁵N to groundwaters; however, it is clear that continued inputs of anthropogenic N via SGD have the potential to severely impact ecologically and economically valuable seagrass meadows and coral reefs along the Caribbean coast of Mexico.     

Possible mixotrophy of pigmented nanoflagellates: Microbial plankton biomass, primary production and phytoplankton growth in the NW Iberian upwelling in spring

Microbial plankton biomass, primary production (PP) and phytoplankton growth rates (μ) were estimated along the NW Iberian margin during an upwelling relaxation event. Although the interaction between wind forcing and coastline singularities caused high spatial variability in PP (0.4-8.4 g C m⁻² d⁻¹), two domains (coastal and oceanic) could be distinguished regarding microbial plankton biomass and μ. At the coastal domain, with higher influence of upwelling, diatoms showed an important contribution (27 ± 17%) to total autotrophic biomass (AB). Nonetheless, AB was dominated by autotrophic nanoflagellates (ANF) at both realms, accounting for 62 ± 16% and 89 ± 6% of the integrated AB at the coastal and oceanic domain respectively. AB and heterotrophic biomass (HB) were significantly higher at the oceanic than at the coastal domain, with both biomasses covarying according to HB:AB = 0.33. Whereas the low phytoplankton carbon to chlorophyll a ratio (C_ph:chl a = 38 ± 3) and the high μ = 0.54 ± 0.09 d⁻¹ registered at the coastal stations suggest that phytoplankton was not nutrient limited at this domain, the values (C_ph:chl a = 157 ± 8; μ = 0.17 ± 0.02 d⁻¹) recorded at the oceanic domain point to severe nutrient limitation. However, the high Fv/Fm fluorescence ratios (0.56 ± 0.09) measured at the sea surface in the oceanic domain suggest that nutrient limitation did not occur. To reconcile these two apparently opposite views, it is suggested the occurrence of mixotrophic nutrition of ANF, with heterotrophic nutrition supplying about 75% of carbon requirements.     

Radium tracing of submarine groundwater discharge (SGD) and associated nutrient fluxes in a highly-permeable bed coastal zone, Korea

In order to estimate submarine groundwater discharge (SGD) and SGD-driven nutrient fluxes, we measured the concentrations of nutrients, ²²⁴Ra, and ²²⁶Ra in seawater, river water, and coastal groundwater of Yeongil Bay (in the southeastern coast of Korea) in August 2004 and February 2005. The bottom sediments over the shallow areas of this bay are composed mainly of coarse sands. Large excess concentrations of ²²⁴Ra, ²²⁶Ra, and Si supplied from SGD were observed in August 2004, while these excess concentrations were not apparent in February 2005. Based on the mass balance for ²²⁴Ra, ²²⁶Ra, and Si, which showed conservative mixing behavior in seawater, SGD was estimated to be approximately 6 × 10⁶ m³ day^− 1 (seepage rate = 0.2 m day^− 1) in shallow areas (< 9 m water depth) in August 2004, which is much higher than the SGD level typically found in other coastal regions worldwide. During the summer period, SGD-driven nutrients in this bay contributed approximately 98%, 12%, and 76% of the total inputs for dissolved inorganic nitrogen (DIN), phosphorus (DIP), and silicate (DSi), respectively. Our study implies that the ecosystem in this highly permeable bed coastal zone is influenced strongly by SGD during summer, while such influences are negligible in winter.     

Nereis diversicolor and copper contamination effect on the erosion of cohesive sediments: A flume experiment

The effect of bioturbation on the erodability of natural and manipulated copper spiked sediments (3 μmol Cu g⁻¹ dw) was investigated using sediments collected in the Tagus estuary and Nereis diversicolor (900 ind m⁻²). The input of particulate matter and Cu into the water column as a result of erosion was quantified in an annular flume at 7 shear velocities (1–13 cm s⁻¹). The biogeochemical characteristics of the sediment were analysed in depth down to 8 cm. Cu contamination elicited lower levels of eroded matter and lower shear strength profiles. Eroded matter and sediment shear strength values were higher (up to 1.7 kg m⁻²) in the presence of N. diversicolor, whose effect was less pronounced under contamination. Sediment erodability was not only related to hydrodynamics but was highly affected by the biogeochemical characteristics and contamination of the sediments.     

Understanding the recurrent large-scale green tide in the Yellow Sea: Temporal and spatial correlations between multiple geographical,aquacultural and biological factors

The coast of Jiangsu Province in China – where Ulva prolifera has always been firstly spotted before developing into green tides – is uniquely characterized by a huge intertidal radial mudflat. Results showed that: (1) propagules of U. prolifera have been consistently present in seawater and sediments of this mudflat and varied with locations and seasons; (2) over 50,000 tons of fermented chicken manure have been applied annually from March to May in coastal animal aquaculture ponds and thereafter the waste water has been discharged into the radial mudflat intensifying eutrophication; and (3) free-floating U. prolifera could be stranded in any floating infrastructures in coastal waters including large scale Porphyra farming rafts. For a truly integrated management of the coastal zone, reduction in nutrient inputs, and control of the effluents of the coastal pond systems, are needed to control eutrophication and prevent green tides in the future.     

Methane sources,sinks and fluxes in a temperate tidal Lagoon: The Arcachon lagoon (SW France)

The Arcachon lagoon is a 156 km² temperate mesotidal lagoon dominated by tidal flats (66% of the surface area). The methane (CH₄) sources, sinks and fluxes were estimated from water and pore water concentrations, from chamber flux measurements at the sediment–air (low tide), sediment–water and water–air (high tide) interfaces, and from potential oxidation and production rate measurements in sediments. CH₄ concentrations in waters were maximal (500–1000 nmol l⁻¹) in river waters and in tidal creeks at low tide, and minimal in the lagoon at high tide (<50 nmol l⁻¹). The major CH₄ sources are continental waters and the tidal pumping of sediment pore waters at low tide. Methanogenesis occurred in the tidal flat sediments, in which pore water concentrations were relatively high (2.5–8.0 μmol l⁻¹). Nevertheless, the sediment was a minor CH₄ source for the water column and the atmosphere because of a high degree of anaerobic and aerobic CH₄ oxidation in sediments. Atmospheric CH₄ fluxes at high and low tide were low compared to freshwater wetlands. Temperate tidal lagoons appear to be very minor contributor of CH₄ to global atmosphere and to open ocean.     

Chlorophyll distribution in continental shelf sediments off West Palm Beach,Florida and west end,Bahamas

Measurements were made of chlorophyll-a and phaeophytin-a in calcareous sediments along transects off the east coast of Florida (75–190 m) and the west coast of Grand Bahama Island (170–300 m). Solvent partitioning showed that chlorophyll-a concentrations never exceeded 0·1 mg m^?2 at either location, most as degradation products. Total pigment concentrations (chlorophyll and phaeopigments) ranged from 0·18–1·83 mg m^?2 in sediments off Grand Bahama Island and 2·50 to 20·65 mg m^?2 off West Palm Beach. Pigments, expressed per gram dry weight of sediments, increased with depth across the Florida Continental Shelf. This is probably due to differences in sediment character between near-shore and off-shore sediments.     

Benthic nutrient fluxes along the Laurentian Channel: Impacts on the N budget of the St. Lawrence marine system

Water column concentrations and benthic fluxes of dissolved inorganic nitrogen (DIN) and oxygen (DO) were measured in the Gulf of St. Lawrence and the Upper and Lower St. Lawrence Estuary (USLE and LSLE, respectively) to assess the nitrogen (N) budget in the St. Lawrence (SL) system, as well as to elucidate the impact of bottom water hypoxia on fixed-N removal in the LSLE. A severe nitrate deficit, with respect to ambient phosphate concentrations (N*∼−10 μmol L⁻¹), was observed within and in the vicinity of the hypoxic bottom water of the LSLE. Given that DO concentrations in the water column have remained above 50 μmol L⁻¹, nitrate reduction in suboxic sediments, rather than in the water column, is most likely responsible for the removal of fixed N from the SL system. Net nitrate fluxes into the sediments, derived from pore water nitrate concentration gradients, ranged from 190 μmol m⁻² d⁻¹ in the hypoxic western LSLE to 100 μmol m⁻² d⁻¹ in the Gulf. The average total benthic nitrate reduction rate for the Laurentian Channel (LC) is on the order of 690 μmol m⁻² d⁻¹, with coupled nitrification-nitrate reduction accounting for more than 70%. Using average nitrate reduction rates derived from the observed water column nitrate deficit, the annual fixed-N elimination within the three main channels of the Gulf of St. Lawrence and LSLE was estimated at 411 × 10⁶ t N, yielding an almost balanced N budget for the SL marine system.     

Source rock characteristics and hydrocarbon generation modelling of Upper Cretaceous Mukalla Formation in the Jiza-Qamar Basin,Eastern Yemen

The Upper Cretaceous Mukalla coals and other organic-rich sediments which are widely exposed in the Jiza-Qamar Basin and believed to be a major source rocks, were analysed using organic geochemistry and petrology. The total organic carbon (TOC) contents of the Mukalla source rocks range from 0.72 to 79.90% with an average TOC value of 21.50%. The coals and coaly shale sediments are relatively higher in organic richness, consistent with source rocks generative potential. The samples analysed have vitrinite reflectance in the range of 0.84–1.10 %Ro and pyrolysis T_max in the range of 432–454 °C indicate that the Mukalla source rocks contain mature to late mature organic matter. Good oil-generating potential is anticipated from the coals and coaly shale sediments with high hydrogen indices (250–449 mg HC/g TOC). This is supported by their significant amounts of oil-liptinite macerals are present in these coals and coaly shale sediments and Py-GC (S₂) pyrograms with n-alkane/alkene doublets extending beyond nC₃₀. The shales are dominated by Type III kerogen (HI < 200 mg HC/g TOC), and are thus considered to be gas-prone.One-dimensional basin modelling was performed to analysis the hydrocarbon generation and expulsion history of the Mukalla source rocks in the Jiza-Qamar Basin based on the reconstruction of the burial/thermal maturity histories in order to improve our understanding of the of hydrocarbon generation potential of the Mukalla source rocks. Calibration of the model with measured vitrinite reflectance (Ro) and borehole temperature data indicates that the present-day heat flow in the Jiza-Qamar Basin varies from 45.0 mW/m² to 70.0 mW/m² and the paleo-heat flow increased from 80 Ma to 25 Ma, reached a peak heat-flow values of approximately 70.0 mW/m² at 25 Ma and then decreased exponentially from 25 Ma to present-day. The peak paleo-heat flow is explained by the Gulf of Aden and Red Sea Tertiary rifting during Oligocene-Middle Miocene, which has a considerable influence on the thermal maturity of the Mukalla source rocks. The source rocks of the Mukalla Formation are presently in a stage of oil and condensate generation with maturity from 0.50% to 1.10% Ro. Oil generation (0.5% Ro) in the Mukalla source rocks began from about 61 Ma to 54 Ma and the peak hydrocarbon generation (1.0% Ro) occurred approximately from 25 Ma to 20 Ma. The modelled hydrocarbon expulsion evolution suggested that the timing of hydrocarbon expulsion from the Mukalla source rocks began from 15 Ma to present-day.     

The relationship between volatile halocarbons and phytoplankton pigments during a Trichodesmium bloom in the coastal eastern Arabian Sea

Eukaryotic phytoplankton such as diatoms and prymnesiophytes produce biogenic halocarbons in the ocean that serve as important sources of chlorine and bromine to the atmosphere, but the role of cyanobacteria in halocarbon production is not well established. We studied distributions of chloroform (CHCl₃), carbon tetrachloride (CCl₄), methylene bromide (CH₂Br₂) and bromoform (CHBr₃) in relation to phytoplankton composition, determined from pigment analysis complemented by microscopic examination, for one month in coastal waters of the eastern Arabian that experienced a Trichodesmium bloom that typically occurs during the Spring Intermonsoon season. High concentrations of zeaxanthin (23 μg l⁻¹), alpha beta betacarotene (6 μg l⁻¹) and chlorophyll a (67 μg l⁻¹) were found within the bloom whereas the marker pigment concentrations were low outside the bloom. CHCl₃ and CCl₄ occurred in relatively high concentrations in surface waters whereas CH₂Br₂ and CHBr₃ were restricted to the subsurface layer. Chlorinated halocarbons were positively inter-correlated and with CHBr₃. The observed spatial and temporal trends in brominated compounds appear to be related to the abundance of Trichodesmium although correlations between concentrations of brominated compounds with various marker pigments were poor and statistically non-significant. The results support the existence of multiple sources and sinks of halogenated compounds, which might obscure the relationship between halocarbons and phytoplankton composition.     

The distribution of chlorophyll-a and dominant planktonic components in the coastal transition zone off Concepción, central Chile, during different oceanographic conditions

The oceanographic setting and the planktonic distribution in the coastal transition zone off Concepción (∼35-38°S, ∼73-77°W), an area characterized by its high biological production, were assessed during two different seasons: austral spring with equatorward upwelling favorable winds and austral winter with predominately northerly winds. Oceanographic and biological data (total chlorophyll-a, particulate organic carbon, microplankton, large mesozooplankton >500 μm as potential consumers of microplankton) were obtained during two cruises (October 1998, July 1999) together with satellite imagery for wind stress, geostrophic flow, surface temperature, and chlorophyll-a data. The physical environment during the spring sampling was typical of the upwelling period in this region, with a well-defined density front in the shelf-break area and high concentrations of surface chlorophyll-a (>5 mg m⁻³) on the shelf over the Itata terrace. During the winter sampling, highly variable though weakly upwelling-favorable winds were observed along with lower surface chlorophyll-a values (<2 mg m⁻³) on the shelf. In the oceanic area (>100 km from the coast), cyclonic and anti-cyclonic eddies were evident in the flow field during both periods, the former coinciding with higher chlorophyll-a contents (∼1 mg m⁻³) than in the surrounding waters. Also, a cold, chlorophyll-a rich filament was well defined during the spring sampling, extending from the shelf out to 350-400 km offshore. Along a cross-shelf transect, the micro- and meso-planktonic assemblages displayed higher coastal abundances during the spring cruise but secondary peaks appeared in the oceanic area during the winter cruise, coinciding with the distribution of the eddies. These results suggest that the mesoscale features in this region, in combination with upwelling, play a role in potentially increasing the biological productivity of the coastal transition zone off Concepción.     

Surface boundary-layer variability off Northern California, USA, during upwelling

A five-element mooring array is used to study surface boundary-layer transport over the Northern California shelf from May to August 2001. In this region, upwelling favorable winds increase in strength offshore, leading to a strong positive wind stress curl. We examine the cross-shelf variation in surface Ekman transport calculated from the wind stress and the actual surface boundary-layer transport estimated from oceanic observations. The two quantities are highly correlated with a regression slope near one. Both the Ekman transport and surface boundary layer transport imply curl-driven upwelling rates of about 3×10⁻⁴ m s⁻¹ between the 40 and 90 m isobaths (1.5 and 11.0 km from the coast, respectively) and curl-driven upwelling rates about 1.5×10⁻⁴m s⁻¹ between the 90 and 130 m isobaths (11.0 and 28.4 km from the coast, respectively). Thus curl-driven upwelling extends to at least 25 km from the coast. In contrast, upwelling driven by the adjustment to the coastal boundary condition occurs primarily inshore of the 40-m isobath. The upwelling rates implied by the differentiating the 40-m transport observations with the coastal boundary condition are up to 8×10⁻⁴ m s⁻¹. The estimated upwelling rates and the temperature–nitrate relationship imply curl-driven vertical nitrate flux divergences are about half of those driven by coastal boundary upwelling.     

Spatial variability of epifaunal communities from artificial habitat: Shipwrecks in the Southern Bight of the North Sea

We investigated the cover, community structure and abiotic environment of nine shipwrecks lying at increasing distance from the Belgian coast. Results indicated that all shipwrecks were strongly dominated by cnidarians in terms of biomass and by amphipods in terms of abundances. Based on their epifaunal composition, three groups of shipwrecks could be determined. Metridium senile dominated a species poor community of the coastal sites. On the same sites, a Tubularia larynx community with a more species-rich assemblage was also developing. The T. larynx community had a lower biomass value (102 g AFDW m⁻²) and significantly lower species richness compared to the other sites. The coastal sites were characterized by periodic salinity decreases, large seasonal temperature fluctuation, high total suspended matter load and reduced current velocity. Channel water masses influence the offshore sites causing a more stable temperature and salinity environment, less turbid waters and high current speed. Tubularia indivisa dominated this community, with an average biomass of 229 g AFDW m⁻². Intermediate sites were also dominated by T. indivisa, but a higher biomass (424 g AFDW m⁻²) was observed. They showed intermediate results for the abiotic parameters and fast current velocities. Hypotheses for the observed variation in community structures are discussed in the light of the abiotic characterization of the shipwrecks.     

Rates and regulation of nitrogen cycling in seasonally hypoxic sediments during winter (Boknis Eck,SW Baltic Sea): Sensitivity to environmental variables

This study investigates the biogeochemical processes that control the benthic fluxes of dissolved nitrogen (N) species in Boknis Eck – a 28 m deep site in the Eckernförde Bay (southwestern Baltic Sea). Bottom water oxygen concentrations (O_2−BW) fluctuate greatly over the year at Boknis Eck, being well-oxygenated in winter and experiencing severe bottom water hypoxia and even anoxia in late summer. The present communication addresses the winter situation (February 2010). Fluxes of ammonium (NH₄⁺), nitrate (NO₃⁻) and nitrite (NO₂⁻) were simulated using a benthic model that accounted for transport and biogeochemical reactions and constrained with ex situ flux measurements and sediment geochemical analysis. The sediments were a net sink for NO₃⁻ (−0.35 mmol m⁻² d⁻¹ of NO₃⁻), of which 75% was ascribed to dissimilatory reduction of nitrate to ammonium (DNRA) by sulfide oxidizing bacteria, and 25% to NO₃⁻ reduction to NO₂⁻ by denitrifying microorganisms. NH₄⁺ fluxes were high (1.74 mmol m⁻² d⁻¹ of NH₄⁺), mainly due to the degradation of organic nitrogen, and directed out of the sediment. NO₂⁻ fluxes were negligible. The sediments in Boknis Eck are, therefore, a net source of dissolved inorganic nitrogen (DIN = NO₃⁻ + NO₂⁻ + NH₄⁺) during winter. This is in large part due to bioirrigation, which accounts for 76% of the benthic efflux of NH₄⁺, thus reducing the capacity for nitrification of NH₄⁺. The combined rate of fixed N loss by denitrification and anammox was estimated at 0.08 mmol m⁻² d⁻¹ of N₂, which is at the lower end of previously reported values. A systematic sensitivity analysis revealed that denitrification and anammox respond strongly and positively to the concentration of NO₃⁻ in the bottom water (NO₃⁻_BW). Higher O_2−BW decreases DNRA and denitrification but stimulates both anammox and the contribution of anammox to total N₂ production (%R_amx). A complete mechanistic explanation of these findings is provided. Our analysis indicates that nitrification is the geochemical driving force behind the observed correlation between %R_amx and water depth in the seminal study of Dalsgaard et al. (2005). Despite remaining uncertainties, the results provide a general mechanistic framework for interpreting the existing knowledge of N-turnover processes and fluxes in continental margin sediments, as well as predicting the types of environment where these reactions are expected to occur prominently.     

Isotopic,trace element and nutrient characterization of coastal waters from Ubatuba inner shelf area,south-eastern Brazil

Stable isotopes, tritium, radium isotopes, radon, trace elements and nutrients data were collected during two sampling campaigns in the Ubatuba coastal area (south-eastern Brazil) with the aim of investigating submarine groundwater discharge (SGD) in the region. The isotopic composition (δD, δ¹⁸O, ³H) of submarine waters was characterised by significant variability and heavy isotope enrichment. The stable isotopes and tritium data showed good separation of groundwater and seawater groups. The contribution of groundwater in submarine waters varied from a few % to 17%. Spatial distribution of ²²²Rn activity concentration in surface seawater revealed changes between 50 and 200 Bq m⁻³ which were in opposite relationship with observed salinities. Time series measurements of ²²²Rn activity concentration in Flamengo Bay (from 1 to 5 kBq m⁻³), obtained by in situ underwater gamma-spectrometry showed a negative correlation between the ²²²Rn activity concentration and tide/salinity. This may be caused by sea level changes as tide effects induce variations of hydraulic gradients, which increase ²²²Rn concentration during lower sea level, and opposite, during high tides where the ²²²Rn activity concentration is smaller. The estimated SGD fluxes varied during 22–26 November between 8 and 40 cm d⁻¹, with an average value of 21 cm d⁻¹ (the unit is cm³/cm² per day). The radium isotopes and nutrient data showed scattered distributions with offshore distance and salinity, which implies that in a complex coast with many small bays and islands, the area has been influenced by local currents and groundwater–seawater mixing. SGD in the Ubatuba area is fed by coastal contaminated groundwater and re-circulated seawater (with small admixtures of groundwater), which claims for potential environmental concern with implications on the management of freshwater resources in the region.     

Effects of upwelling,tides and biological processes on the inorganic carbon system of a coastal lagoon in Baja California

The role of coastal lagoons and estuaries as sources or sinks of inorganic carbon in upwelling areas has not been fully understood. During the months of May–July, 2005, we studied the dissolved inorganic carbon system in a coastal lagoon of northwestern Mexico during the strongest period of upwelling events. Along the bay, different scenarios were observed for the distributions of pH, dissolved inorganic carbon (DIC) and apparent oxygen utilization (AOU) as a result of different combinations of upwelling intensity and tidal amplitude. DIC concentrations in the outer part of the bay were controlled by mixing processes. At the inner part of the bay DIC was as low as 1800 μmol kg⁻¹, most likely due to high water residence times and seagrass CO₂ uptake. It is estimated that 85% of San Quintín Bay, at the oceanic end, acted as a source of CO₂ to the atmosphere due to the inflow of CO₂-rich upwelled waters from the neighboring ocean with high positive fluxes higher than 30 mmol C m⁻² d⁻¹. In contrast, there was a net uptake of CO₂ and HCO₃⁻ by the seagrass bed Zostera marina in the inner part of the bay, so the pCO₂ in this zone was below the equilibrium value and slightly negative CO₂ fluxes of −6 mmol C m⁻² d⁻¹. Our positive NEP and ΔDIC values indicate that Bahía San Quintín was a net autotrophic system during the upwelling season during 2005.