The effect of impoundments on the structure and function of fish fauna in a highly regulated dry tropics estuary

Ross River flows through the Townsville/Thuringowa urban area in north Queensland, Australia, which has a dry tropical climate characterized by high inter-annual rainfall variation. Unregulated rivers in the Ross catchment basin deliver freshwater flows to their estuaries during both strong and weak wet seasons. The construction of a series of dams and weirs on Ross River means the wet-dry cycle is accentuated, leading to constant marine salinities throughout the estuary becoming the norm, with a lack of freshwater flow for five or more years at a time. The fish fauna of Ross River estuary was sampled in the post wet and dry seasons during an extremely dry climatic period (1994) and extremely wet climatic period (2000) using a small mesh (6 mm) pocket seine net. The fish fauna seemed to reflect seasonal differences. Catches from 1994 (dry period) were comprised entirely of 88 marine and euryhaline species, while the 69 species captured in 2000 (wet period) included 13 freshwater species. However, the freshwater species in the upper estuary were individuals washed over the weir, rather than part of a functional faunal gradient. During 1994 faunal composition was related more to site identity than to the position of the site along an upstream gradient. In contrast, during 2000 there were clear upstream faunal gradients with compositions in upstream sites heavily influenced by freshwater species, and marine and euryhaline species dominating downstream sites. Patterns of species dominance also varied between years. In contrast, trophic composition showed consistent shifts in both years, from high proportions of herbivores, carnivores and benthoplanktivores in May towards high proportions of benthivores in August. Not only do faunal composition, seasonal faunal change and ecological connectivity seem to be impaired, but ecological processes in the estuary that rely on seasonal freshwater flows are likely to be unable to operate normally in most years. The extreme seasonality in Ross River may serve as a model for many of the changes that will be experienced in dry tropics estuaries under global climate change scenarios of more extreme seasonality.     

A comparison of fish assemblages and fisheries in intermittently open and permanently open coastal lagoons on the south coast of New South Wales,South-Eastern Australia

The fish assemblages inhabiting two intermittently open coastal lagoons and one permanently open coastal lagoon on the mid south coast of New South Wales were studied over several years during the mid to late 1980s. Fish were sampled either monthly or bimonthly using rotenone ichthyocide and beam trawls (in shallow vegetated habitats), beach seines (in shallow inshore sand habitats), and multiple-panel gill nets (in deep lagoon habitats with mud or sand floors). These fish assemblages were compared and contrasted spatially according to habitat both within lagoons and between the two lagoon types using a multivariate ordination technique. In the permanently open lagoon, Lake Conjola, dominant faunal elements of commercial or recreational fisheries importance included Girellidae, Clupeidae, Monacanthidae, Pomatomidae, Mugilidae, Sparidae, Sillaginidae, Gerreidae, Terapontidae, and Platycephalidae. Dominant faunal elements of no commercial or recreational fisheries importance here included Ambassidae, Scorpaenidae, Gobiidae, Atherinidae, and Eleotridae. In the intermittently open lagoons, Swan Lake and Lake Wollumboola, the dominant faunal elements included Sparidae, Mugilidae, Girellidae, Hemiramphidae, Pomatomidae, and Arripidae amongst the commercial group; and Atherinidae, Syngnathidae, Gobiidae, Eleotridae, and Scorpaenidae amongst the noncommercial group. The overall species richness of the permanently open lagoon (≈100 species, including 52 commercial species) was found to be approximately 2.5 times that of each of the two intermittently open lagoons (39 species, including 22 commercial species for Swan Lake; and 41 species, including 26 commercial species for Lake Wollumboola). The dominant faunal elements of the latter two south-eastern Australian intermittently open lagoons were also compared with those of similar lagoons in south-western Australia, southern Africa, and western Mexico, and the faunal similarities at the species, genus, and family levels are discussed. Available commercial and recreational fisheries catch data for the three south-eastern Australian coastal lagoons were also analyzed and compared. The two intermittently open lagoons were found to support number of species in the latter and also its greater water surface area.     

Effects of an Acute Hypoxic Event on Microplankton Community Structure in a Coastal Harbor of Southern California

Fish mortality and hypoxic events occur in many coastal and inland systems and may result from natural or anthropogenically mediated processes. The effects of consequent changes in water biogeochemistry have been investigated for communities of benthic invertebrates and pelagic metazoans. The responses of micro-plankton assemblages, however, have remained largely unstudied. The northern basin of King Harbor, a small embayment within Santa Monica Bay, CA, USA, suffered a massive fish kill in March 2011 as a consequence of acute hypoxia. Dissolved oxygen concentrations < 0.1 ml?l^?1 were measured in the northern basin of the harbor for several days following the mortality event, and a strong spatial gradient of oxygen was observed from the northern basin to waters outside the harbor. The microplankton community within King Harbor differed significantly from a diatom-dominated community present in neighboring Santa Monica Bay. The latter region appeared unaffected by physicochemical changes, induced by the fish kill, that were observed within the harbor. A trophic shift was observed throughout King Harbor from a photoautotrophic-dominated assemblage to one of heterotrophic forms, with relative abundances of bacterivorous ciliates increasing by more than 80 % in the most impacted part of the harbor. Significant changes in community structure were observed together with dramatically reduced photosynthetic yield of the remaining phytoplankton, indicating severe physiological stress during the extreme hypoxia.     

Exotic species in the Hudson River basin: A history of invasions and introductions

We compiled information about the distribution of exotic organisms in the fresh waters of the Hudson River basin. At least 113 nonindigenous species of vertebrates, vascular plants, and large invertebrates have established populations in the basin. Too little was known about the past or present distributions of algae and most small invertebrates to identify exotic species in these groups. Most established exotic species in the Hudson River basin originated from Eurasia or the Mississippi-Great Lakes basins, and were associated with vectors such as unintentional, releases (especially escapes from cultivation), shipping activities (especially, solid ballast or ballast water), canals, or intentional releases. Rates of species invasions of fresh and oligohaline waters in the basin have been high (ca. one new species per year) since about 1840. For many well-studied groups, introduced species constitute 4% to nearly 60% of the species now in the basin. Although the ecological impacts of the invaders in the Hudson River basin have not been well studied, we believe that about 10% of the exotic species, have had major ecological impacts in the basin. Since, the rates, of entry and composition of exotic species in the Hudson basin are similar to those observed., previously for the Laurentian Great Lakes, invasions tended to occur earlier in the Hudson basin, probably reflecting the earlier history of human commerce. While most exotics have had negative impacts on local flora and fauna, some fish species have provided unique angling opportunities and important economic benefits.     

Factors Affecting Macrobenthic Fauna in a Tropical Hypersaline Coastal Lagoon in Ghana,West Africa

The macrobenthic fauna in the large, hypersaline, shallow Keta lagoon in Ghana was sampled at 20 stations in the wet (September 2002) and dry seasons (March 2003) to elucidate the effects of abiotic factors on community patterns. The macrobenthic fauna was low in density and species diversity and numerically dominated by bivalves and capitellid polychaetes. These organisms appear able to withstand physical disturbance (when lagoon water levels become extremely low) and osmotic stress (when salinities are extremely high) and tend to redistribute along environmental gradients. Parallel seasonal differences in several environmental variables and the macrobenthic fauna indicate a highly dynamic system. Species richness and diversity were higher in the wet season than the dry season. Salinity, percent clay, pH, and turbidity in that order were the major significant variables structuring the macrobenthic faunal assemblage in Keta lagoon. The strong effect of seasonal salinity changes on macrobenthic faunal assemblages may have trophic consequences for higher organisms of commercial importance, such as fishes and shorebirds, in the Keta lagoon.     

Before the flood: Miocene otoliths from eastern Amazon Pirabas Formation reveal a Caribbean-type fish fauna

The Pirabas Formation of Early Miocene age represents the final stage of the central western Atlantic carbonate platform in northeastern South America, predating the emplacement of the Amazon delta system. The otolith-based fossil fish fauna is represented by 38 species typical of a shallow marine environment. A total of 18 species are described new to science from the families Congridae, Batrachoididae, Bythitidae, Sciaenidae and Paralichthyidae. The fish fauna was associated with high benthic and planktic primary productivity including seagrass meadows, calcareous algae and suspension-feeders. The break of todays shallow marine bioprovince at the Amazonas delta mouth is not evident from the fish fauna of the Pirabas Fm., which shows good correlation with the Gatunian/proto-Caribbean bioprovince known from an only slightly younger time window in Trinidad and Venezuela. Differences observed to those Early Miocene faunal associations are interpreted to be mainly due to stratigraphic and geographic and not environmental differences. We postulate that the emergence of the Amazonas river mouth close to its present day location has terminated the carbonate cycle of the Pirabas Fm. and pushed back northwards a certain proportion of the fish fauna here described.     

The chironomid (Insecta: Diptera) and other fauna of aMyriophylum spicatum L. plant bed in the lower Hudson River

The benthic fauna of a small cove of the Hudson River containing the aquatic plantMyriophyllum spicatum L. was studied for a one-year period. The fauna was characteristic of oligohaline zones of United States east coast estuaries. Total abundance of invertebrates retained on a 0.12 mm mesh sieve averaged 124,631 organisms m^?2 (sediment and plant populations combined) and ranged up to 196,000 m^?2. During the May–August period, invertebrates living on the plants comprised 16–35% of the invertebrate fauna in the cove. Chironomid larvae were the most abundant organisms on plants and the third most abundant in the sediments. Two assemblages of chironomid species were recognized; one lived solely in the sediments, the other lived primarily on the plants.Chironomus decorus andTanytarsus sp. dominated the former group andCricotopus sylvestris the latter. The chironomidDicrotendipes modestus utilized both habitats. During the May–August period, chironomid biomass on the plants comprised approximately 50% of total chironomid biomass in the cove. The mean dry-weight biomass of chironomids in the cove (1.6 g m^?2) is estimated to be sixteen times greater than that of the fauna in the deeper areas of the river. Because chironomid larvae are eaten by fish and invertebrates, shallow water regions with their rich chironomid (and other fauna) may contribute importantly to the trophic dynamics of estuarine systems. *** DIRECT SUPPORT *** A01BY009 00004     

Transport of Crustacean Larvae Between a Low-Inflow Estuary and Coastal Waters

The effectiveness of larval behavior in regulating transport between well-mixed, low-inflow estuaries and coastal waters in seasonally arid climates is poorly known. We determined the flux of an assemblage of benthic crustacean larvae relative to physical conditions between a shallow estuary and coastal waters on the upwelling coast of northern California (38°18′N, 123°03′W) from 29 to 31 March 2006. We detected larval behaviors that regulate transport in adjacent coastal waters and other estuaries for only two taxa in the low-inflow estuary, but they were apparent for taxa outside the estuary. Vertical mixing in the shallow estuary may have overwhelmed larvae of some species, or salinity fluctuations may have been too slight to cue tidal vertical migrations. Nevertheless, all larval stages of species that complete development in nearshore coastal waters were present in the estuary, because they remained low in the water column reducing seaward advection or they were readily exchanged between the estuary and open coast by tidal flows. Weak tidal flows and gravitational circulation at the head of the estuary reduced seaward transport during development for species that completed development nearshore, whereas larval release during nocturnal ebb tides enhanced seaward transport for species that develop offshore. Thus, nonselective tidal processes dominated larval transport for most species back and forth between the low-inflow estuary and open coastal waters, whereas in adjacent open coastal waters, larval behavior in the presence of wind-induced shear was more important in regulating migrations between adult and larval habitats along this upwelling coast.     

Food Web Structure of the Alaskan Nearshore Shelf and Estuarine Lagoons of the Beaufort Sea

The eastern Alaska Beaufort Sea coast is characterized by numerous shallow (2–5 m) estuarine lagoons, fed by streams and small rivers that drain northward from the Brooks Range through the arctic coastal plain, and bounded seaward by barrier islands and shoals. Millions of birds from six continents nest and forage during the summer period in this region using the river deltas, lagoons, and shoreline along with several species of anadromous and marine fish. We examined biogeochemical processes linking the benthic community to the overall food web structure of these poorly studied but pristine estuaries, which are largely covered by 1.8 m of ice for 10 months annually. In summer, these lagoons are relatively warm with brackish salinities (5–10°C, S = 10–25) compared to more open coastal waters (0–5°C, S > 27). The stable isotopic composition of organic materials in sediments (i.e., benthic particulate organic matter) and water column suspended particulate organic matter from both streams and lagoons are largely indistinguishable and reflect strong terrestrial contributions, based upon δ¹³C and δ¹⁵N values (−25.6‰ to −27.4‰ and 1.4‰ to 3.3‰, respectively). By comparison, shifts toward more heavy isotope-enriched organic materials reflecting marine influence are observed on the adjacent coastal shelf (−24.8‰ to −25.4‰ and 3.4‰ to 5.3‰, respectively). The isotopic composition of lagoon fauna is consistent with a food web dominated by omnivorous detritovores strongly dependent on microbial processing of terrestrial sources of carbon. Biomagnification of ¹⁵N in benthic organisms indicate that the benthic food web in lagoons support up to four trophic levels, with carnivorous gastropod predators and benthic fishes (δ¹⁵N values up to 14.4‰) at the apex.     

Natural Disturbance Shapes Benthic Intertidal Macroinvertebrate Communities of High Latitude River Deltas

Unlike lower latitude coastlines, the estuarine nearshore zones of the Alaskan Beaufort Sea are icebound and frozen up to 9 months annually. This annual freezing event represents a dramatic physical disturbance to fauna living within intertidal sediments. The main objectives of this study were to describe the benthic communities of Beaufort Sea deltas, including temporal changes and trophic structure. Understanding benthic invertebrate communities provided a baseline for concurrent research on shorebird foraging ecology at these sites. We found that despite continuous year-to-year episodes of annual freezing, these estuarine deltas are populated by a range of invertebrates that represent both marine and freshwater assemblages. Freshwater organisms like Diptera and Oligochaeta not only survive this extreme event, but a marine invasion of infaunal organisms such as Amphipoda and Polychaeta rapidly recolonizes the delta mudflats following ice ablation. These delta sediments of sand, silt, and clay are fine in structure compared to sediments of other Beaufort Sea coastal intertidal habitats. The relatively depauperate invertebrate community that ultimately develops is composed of marine and freshwater benthic invertebrates. The composition of the infauna also reflects two strategies that make life on Beaufort Sea deltas possible: a migration of marine organisms from deeper lagoons to the intertidal and freshwater biota that survive the 9-month ice-covered period in frozen sediments. Stable isotopic analyses reveal that both infaunal assemblages assimilate marine and terrestrial sources of organic carbon. These results provide some of the first quantitative information on the infaunal food resources of shallow arctic estuarine systems and the long-term persistence of these invertebrate assemblages. Our data help explain the presence of large numbers of shorebirds in these habitats during the brief summer open-water period and their trophic importance to migrating waterfowl and nearshore populations of estuarine fishes that are the basis of subsistence lifestyles by native inhabitants of the Beaufort Sea coast.     

Trophic Impacts of Marine Mammals and Seabirds in the Río de la Plata Estuary and the Nearshore Oceanic Ecosystem

As top predators, marine mammals and seabirds play an important role in structuring marine ecosystems, and their trophic role have become a major issue. In this study, we quantify the trophic impact of marine mammals and seabirds in the Río de la Plata estuary based on a previous trophic mass balance model of this estuary. The model comprised 37 functional groups: 3 species of marine mammals (2 cetaceans: Tursiops truncatus, Pontoporia blainvillei and 1 pinniped: Otaria flavescens), 1 coastal bird group comprising 11 species, 17 fish, 12 invertebrates, 2 zooplanktons, 1 phytoplankton, detritus, and 5 fishing fleets. Model results showed that seabirds, O. flavescens and P. blainvillei, are apex predators, with high levels of niche overlap among them, suggesting competition for similar resources such as fish species. Marine mammals and seabirds produce negative effects on commercially important species, while, at the same time, indirect positive effects (increase of the biomass) were also detected in some groups related to trophic cascade effects.     

Relationships between Nutrient Enrichment and Benthic Function: Local Effects and Spatial Patterns

Eutrophication-induced changes to benthic faunal activities are problems of significant ecological impact, affecting global nutrient budgets as well as local trophic connections. We address the question of how nitrogen loads to estuarine embayments alter the bioturbation activities of benthic fauna. Specifically, we related local benthic activities to calculated local nitrogen concentrations for 22 northeastern US estuaries. These local nitrogen concentrations were derived from the calculated nitrogen loading for the embayment together with the spatial distribution of the local flushing time. Our results showed a maximum bioturbation rate at intermediate nitrogen concentrations or a “hump-shaped” pattern of response. This behavior was evident in all embayments that had a range of concentrations including low, intermediate, and high values. Embayments where sampling did not include this full range did not show this behavior. This work provides methods and guidance to help managers make decisions concerning the effects of nitrogen loading on the activities and well-being of benthic fauna in coastal embayments. The novelty of this approach lies in identifying the response of bioturbation to nitrogen loading in many systems, without costly and time-consuming speciation of benthic fauna, and also in rapidly identifying embayments and aquatic areas with vulnerable fauna. These results are ecologically significant in supporting the hypothesis that benthic organism abundance and activity will peak at mid-levels of nitrogen due to the interplay of food availability and oxygen levels, noting that the critical levels of these factors differ among water bodies.     

An epeiric ramp: low-energy, cool-water carbonate facies in a Tertiary inland sea, Murray Basin, South Australia

The Murray Supergroup records temperate‐water carbonate deposition within a shallow, mesotrophic, Oligo‐Miocene inland sea protected from high‐energy waves and swells of the open ocean by a granitic archipelago at its southern margin. Rocks are very well preserved and exposed in nearly continuous outcrop along the River Murray in South Australia. Most facies are rich in carbonate silt, contain a background assemblage of gastropods (especially turritellids) and infaunal bivalves, and are packaged on a decimetre‐scale defined by firmground and hardground omission surfaces. Bioturbation is pervasive and overprinted, resulting in rare preservation of physical sedimentary structures. Facies are grouped into four associations (large foraminiferan–bryozoan, echinoid–bryozoan, mollusc and clay facies) interpreted to represent shallow‐water (<50 m) deposition under progressively higher trophic resource levels (from low mesotrophy to eutrophy), and restricted marine conditions from relatively offshore to nearshore regions. A large‐scale shift from high‐ to low‐mesotrophic conditions within lower Miocene strata reflects a change in climate from wet to seasonally dry conditions and highlights the influence terrestrially derived nutrients had upon this shallow, land‐locked sea. Overall, low trophic resource levels during periods of seasonally dry climate resulted in a deepening of the euphotic zone, a widespread proliferation of foraminiferan photozoan fauna and a relatively high carbonate productivity. Inshore, heterozoan facies became progressively muddier and restricted towards the shoreline. In contrast, periods of wet climate led to rising trophic resource levels, resulting in a shallowing of the euphotic zone, a decrease in epifaunal and seagrass cover and widespread development of a mostly heterozoan biota dominated by infaunal echinoids. Rates of carbonate production and accumulation were relatively low. The Murray Basin is best described as an epeiric ramp. Wide facies belts developed in a shallow sea on a low‐angled slope reaching many hundreds of kilometres in length. Grainy shoal and back‐barrier facies were absent. Internally generated waves impinged the sea floor in offshore regions and, because of friction along a wide and shallow sea floor, created a low‐energy expanse of waters across the proximal ramp. Storms were the dominating depositional process capable of disrupting the entire sea floor.     

A new Plattenkalk Konservat Lagerstätte in the Upper Cretaceous of Gara Sbaa, south-eastern Morocco

Laminated, dolomitised marine limestones within a transgressive fluvio-lagoonal-carbonate platform sequence at Gara Sbaa in the Kem Kem region of south eastern Morocco yield well preserved marine fishes and crustaceans. A rarer terrestrial component includes delicate fern fronds, insects and a lizard. Sedimentological structures and stratigraphic context indicate initial shallow waters with in a carbonate lagoon with benthic microbial mats followed by deepening. High precision dating has yet to be accomplished, but a Late Cenomanian or Early Turonian age is indicated on the basis of faunal and sequence-stratigraphic considerations. The fish assemblage has affinities with mid-Cretaceous ichthyofaunas in South America and Lebanon, including taxa in common at generic level.     

Carbonate sediments in a cool‐water macroalgal environment,Kaikoura, New Zealand

Brown and red, and to a lesser extent green, macroalgae are a hallmark of intertidal rocky coasts and adjacent shallow marine environments swept by stormy seas in middle and high latitudes. Such environments produce carbonate sediment but the sediment factory is neither well‐documented nor well‐understood. This study documents the general marine biology and sedimentology of rocky coastal substrates around Kaikoura Peninsula, a setting that typifies many similar cold‐temperate environments with turbid waters and somewhat elevated trophic resources along the eastern coast of South Island, New Zealand. The macroalgal community extends down to 20 m and generally comprises a phaeophyte canopy beneath which is a prolific rhodophyte community and numerous sessile calcareous invertebrates on rocky substrates. The modern biota is strongly depth zoned and controlled by bottom morphology, variable light penetration, hydrodynamic energy and substrate. Most calcareous organisms live on the lithic substrates beneath macroalgae or on algal holdfasts with only a few growing on macroalgal fronds. A live biota of coralline red algae [geniculate, encrusting and nodular (rhodoliths)], bryozoans, barnacles and molluscs (gastropods and epifaunal bivalves), together with spirorbid and serpulid worms, small benthonic foraminifera and echinoids produce sediments that are mixed with terrigenous clastic particles in this overall siliciclastic depositional system. The resultant sediments within macroalgal rocky substrates at Kaikoura contain bioclasts typified by molluscs, corallines and rhodoliths, barnacles and other calcareous invertebrates. In the geological record, however, the occurrence of macroalgal produced sediments is restricted to unconformity‐related early transgressive systems tract stratigraphic intervals and temporally constrained to a Cenozoic age owing to the timing of the evolution of large brown macroalgae.     

Patterns of invertebrate distribution and abundance in the intertidal salt marsh: Causes and questions

The intertidal marsh community comprises both benthic and natant faunal components. The benthic components are primarily small invertebrates residing within or on the soft sediments of the vegetated marsh surface. The natant components include larger, fully aquatic organisms (e.g., fish and shrimp) that inhabit the shallow waters adjacent to the marsh at low tide but interact with the benthic components of the community when the marsh is tidally inundated. In this structurally complex and often expansive intertidal environment, patterns of invertebrate distribution and abundance are not apparent to the casual observer. Benthic core samples taken along an intertidal marsh transect on Sapelo Island, Georgia, USA show that many of the inconspicuous infaunal organisms, which numerically dominate the macrofaunal elements of this soft-substrate community, exhibit zonal distribution patterns along a tidal gradient. Patterns of invertebrate distribution in the intertidal salt marsh are often attributed to the activities of aquatic predators. The results of most predator exclusion experiments have left little doubt that predation/disturbance can be an important determinant of invertebrate abundance in soft-substrate communities; but a growing number of experiments, in both freshwater and marine environments, have produced results that apparently conflict with this, general tenet. Dismissed by some as “failed” experiments, these investigations have exposed our lack of knowledge about the effects of specific predators and the importance of complex interactions which involve more than two trophic levels. Although the importance of predation has been stressed in many recent experimental investigations, there are many other factors that, alone or in combination, may also influence the structure of salt marsh invertebrate assemblages. Included among these are: (1) various density-dependent processes (e.g., adult-larval interactions, agonistic behavior, interspecific competition), (2) selective larval settlement or mortality, (3) the influence of physical factors expressed through habitat preferences, and (4) unpredictable or cyclic physical disturbances. Many questions concerning the spatial and temporal patterns of invertebrate distribution and abundance in the salt marsh are unresolved and remain as challenges to our understanding of soft-substrate community dynamics.     

舟山岛东北部沿海实测台风浪特性

为了解影响舟山岛的台风浪特性,基于舟山岛东北部沿海水域深、浅水两个测站同步测量的6个台风过程波浪资料,统计分析了两测站的波参数变化和谱变化特性,探讨了波浪变化的原因。研究显示:①灿鸿过程的深、浅水站最大波高均大于其他5个台风浪过程;②多数台风浪过程深水站波向主要为东及东南东向,而浅水站主要为东、东北东及东北向,水下地形对波向变化起主要作用;③不同路径台风对两测站谱型有明显影响,灿鸿、巴蓬、黄蜂和天鹅过程的波浪在两站以双峰谱为主,苏迪罗和杜鹃过程深水站波浪以单峰谱居多,浅水站则多峰谱多于单峰谱。研究成果对沿海建筑物的设计以及防灾减灾有重要参考价值。     

Impact of fish net pen culture on the benthic environment of a cove in South Japan

Over the past three decades, fish net pen culture has been developed in the coastal waters of Japan. However, serious organic pollution of the surrounding water and sediment followed the development of this new style of fishery. This paper reports a typical example of the environmental disturbance that has occurred due to the organic pollution resulting from fish net pen culture. Since fish cultivation was initiated in 1973, oxygen depletion of the bottom water and extremely reducing conditions within the sediment have occurred during the summer. These environmental disturbances resulted in unusual dynamics of the benthic communities including defaunation in the summer and recolonization of the azoic areas from autumn to the next spring. Significant changes in the benthic fauna were observed between benthic communities before and after organic pollution of the sediment. Molluscs were originally the most dominant benthic fauna. As organic pollution of the bottom sediment progressed, the molluscs were replaced by polychaetes. Likewise, total biomass of the benthic fauna decreased markedly over the past two decades. Prior to contamination, the organic matter deposited on the sediment was decomposed by the action of bacteria, ciliates, meiofauna, and macrofauna. The addition of organic material resulting from fish culture has overwhelmed these decomposition mechanisms, and conditions have worsened as organic matter is continuously added to the sediment. Contamination of marine sediment by the net pen cultivation of fish sets up a vicious cycle: the addition of exogenous sources of organic material increases the need for a more vigorous decomposition process while actually creating conditions that limit the rate of the necessary decomposition activity. The sustainable development of fish net pen culture will require the creation of a new technology that efficiently promotes the decomposition of organic matter deposited below the pen nets.     

The responses of Patuxent River upper trophic levels to nutrient and trace element induced changes in the lower food web

As a result of human activities, coastal waters can be exposed to multiple stressors that affect primary producers and their interactions with higher trophic levels. Mesocosm experiments were conducted during spring and summer 1996–1998 to investigate the responses of natural populations of primary producers to multiple stressors and the potential for these responses to be transmitted to higher trophic levels (i.e., copepods, bivalves, anemones, and fish). The effects of two stressors, elevated nutrient and trace element loadings, were examined individually and in combination. Nutrient additions had a positive effect on biomass, productivity, and abundance of primary producers (Breitburg et al. 1999; Riedel et al. 2003). Growth or abundance of consumers increased with nutrient additions, but the magnitude of the response was reduced relative to that of their prey. Responses to trace element additions varied seasonally and among taxa. The responses of zooplankton and bivalves to stressor additions were affected by the biomass and changes in species composition of phytoplankton assemblages. The presence of fish predators did not alter zooplankton responses to stressor additions. These results suggest that the extent to which nutrient and trace element effects are transmitted from primary producers to higher trophic levels depends on the capacity of consumers to respond to stressor-induced changes in abundance and species composition of prey, on the absolute abundance of prey, and on the ability of predators to feed on alternative prey. The magnitude of the effects of stressors on estuarine food webs may depend on seasonal variability in species composition of phytoplankton assemblages, whether sensitive species dominate, and whether these species are important prey for secondary consumers. Because spatial and temporal patterns in nutrient and trace element loadings to the estuary can affect species composition of primary producers, it is critically important to examine the magnitude, timing, and spatial relationships of loadings of multiple stressors to coastal waters in order to understand the impacts of these stressors on higher trophic levels.     

Metabolic Responses of Estuarine Microbial Communities to Discharge of Surface Runoff and Groundwater from Contrasting Landscapes

Groundwater discharge is increasingly recognized as a significant source of nutrient input to coastal waters, relative to surface water inputs. There remains limited information, however, on the extent to which nutrients and organic matter from each of these two flowpaths influence the functional responses of coastal microbial communities. As such, this study determined dissolved organic carbon (DOC) and nutrient concentrations of surface water runoff and groundwater from both an urbanized and a relatively pristine forested drainage basin near Myrtle Beach, South Carolina, and quantified the changes in production rates and biomass of phytoplankton and bacterioplankton in response to these inputs during two microcosm incubation experiments (August and October, 2011). Rainwater in the urbanized basin that would otherwise enter the groundwater appeared to be largely rerouted into the surface flowpath by impervious surfaces, bypassing ecosystem buffers and filtration mechanisms. Surface runoff from the developed basin was most enriched in nutrients and DOC and yielded the highest production rates of the various source waters upon addition to coastal waters. The metabolic responses of phytoplankton and bacterioplankton were generally well predicted as a function of initial chemical composition of the various source waters, though more so with bacterial production. Primary and bacterial productivities often correlated at reciprocal time points (24-h measurement of one with the 72-h measurement of the other). These results suggest human modification of coastal watersheds enhances the magnitude of dissolved constituents delivered to coastal waters as well as alters their distributions between surface and groundwater flowpaths, with significant implications for microbial community structure and function in coastal receiving waters.