Wave-generated flow on coral reefs—an analysis for two-dimensional horizontal reef-tops with steep faces

Waves breaking on the seaward rim of a coral reef generate a flow of water from the exposed side of the reef to the sheltered side and/or to either channels through the reef-rim or lower sections of the latter. This wave-generated flow is driven by the water surface gradient resulting from the wave set-up created by the breaking waves.This paper reviews previous approaches to modelling wave-generated flows across coral reefs and discusses the influence of reef morphology and roughness upon these flows. Laboratory measurements upon a two-dimensional horizontal reef platform with a steep reef face provide the basis for extending a previous theoretical analysis for wave set-up on a reef in the absence of a flow [Gourlay, M.R., 1996b. Wave set-up on coral reefs. 2. Set-up on reefs with various profiles. Coastal Engineering 28, 17–55] to include the interaction between a unidirectional flow and the wave set-up. The laboratory model results are then used to demonstrate that there are two basic reef-top flow regimes—reef-top control and reef-rim control. Using open channel flow theory, analytical relationships are derived for the reef-top current velocity in terms of the offreef wave conditions, the reef-top water depth and the physical characteristics of the reef-top topography. The wave set-up and wave-generated flow relationships are found to predict experimental values with reasonable accuracy in most cases. The analytical relationships are used to investigate wave-generated flows into a boat harbour channel on Heron Reef in the southern Great Barrier Reef.     

Analysis on coral reefs mapping using SPOT5 data at the Dongsha Atoll

Coral reefs are an sensitive-to-environment complex marine ecosystem. The ecosystem of corals is rich in biodiversity. Remote sensing offers a powerful tool for categorizing coral reefs and is the most cost-effective approach for the large-scale reef survey. The Dongsha Atoll, more than 300 km2 with an average depth of 10 m, is located at the northern continental margin of the South China Sea. It has been abused by destructive fishing during recent decades. Three satellite imageries (Quickbird2, ETM and SPOT5) are used to evaluate the capabilities of SPOT5 imagery to provide data that are useful for categorizing the current distribution of coral reefs therein. During the data processing, unsupervised classification functions are adopted for ETM and SPOT5 data, while the supervised classification method is used for Quickbird2. The classes are (or not) merged into coral reef, and then will be operated by vectorization, simplification, and topological analysis. There are 1 331 coral reefs larger than 100 m2 with a detection limit of 3×3 pixels at the multi-band data of Quickbird2, which is taken as the comparison baseline. The results extracted from SPOT5 and ETM images are less in number and area than those from the Quickbird2 image, whereas the results from SPOT5 data are better than those of ETM data at the silty lagoon due to its higher resolution. SPOT5 XS band 2 fails to distinguish the deep substrate inside the atoll compared with ETM data because of its poor penetration capability. Only SPOT XS band 1 cannot be used to differentiate coral reef from sand bottom. Merging the SPOT5 multi-bands data with the spatial resolution of SPOT5 pan-data and referring to ETM imagery are expected to provide an optimal satellite-based approach for mapping of coral reefs.     

基于多时相多光谱遥感影像的珊瑚礁面积估算方法研究

准确计算珊瑚礁的面积是评估其资源、环境效应的基础,但我国迄今对南海珊瑚礁的面积估算仍缺乏共识,缺少可靠的估算方法是导致这一现象的重要原因。针对这一问题,本文以西沙群岛羚羊礁为例,提出了一种利用多时相多光谱遥感影像低成本半自动化估算珊瑚礁面积的方法。首先快速目视确定地貌带分界线的粗略位置,然后利用基于梯度向量场的主动轮廓线模型（Gradient Vector Flow-Snake, GVF-Snake）实现这些分界线位置的自动精化,最后将不同时相的瞬时分界线转换为面要素进行多时相的融合,从而得到珊瑚礁的面积。基于53景Sentinel-2 多光谱成像仪（MSI）影像的实验表明,羚羊礁的总面积为17.22 km2（Landsat 8 陆地成像仪（OLI）用于方法稳定性的验证,得到的羚羊礁面积为17.29 km2）,其中礁前斜坡、礁坪?潟湖坡、潟湖的面积分别为1.76 km2、10.29 km2、5.17 km2。该数值与实测数据具有较好的一致性。具体地,该方法获得的地貌带分界点与实测水深所指示分界点的位置偏差能控制在0.2～4.9 m的范围内（不超过0.5个像素）,珊瑚礁最外轮廓线与30 m等深线的位置偏差亦在1个像素大小内（5.7～9.5 m）,而估算面积与高分辨率WorldView-2影像解译得到的面积差异为0.02%。同时,该方法获得的珊瑚礁边界线的完整度、正确度、提取质量精度能够由单时相平均的60%、64%和54%分别提高至84%、83%和72%。此外,该方法能够减小基于不同遥感数据源的珊瑚礁面积估算结果的差异,即6景以上的多时相Sentinel-2 MSI和Landsat 8 OLI影像提取的珊瑚礁面积标准差分别不超过0.01 km2和0.05 km2,仅相当于珊瑚礁总面积的0.2%和0.5%。总而言之,该方法能够用低成本的10 m分辨率Sentinel-2 MSI和30 m分辨率Landsat 8 OLI影像获得接近1.8 m分辨率WorldView-2影像的面积估算精度,且具有良好的稳定性和可靠性。     

基于底质类型变化监测的2005—2018年西沙永乐群岛珊瑚礁白化分析

在海洋环境变化和人类活动的双重影响下,我国珊瑚礁白化现象日趋严重,珊瑚礁健康状况、珊瑚种群数量和丰富度呈逐年下降的趋势。本文基于2005-2007年QuickBird卫星影像、2011-2012年QuickBird/WorldView-2卫星影像和2016-2018年GF-1/2卫星影像等3期高分辨率遥感数据,以西沙永乐群岛羚羊礁、中建岛等14个岛礁为研究区（以下统称永乐群岛）,利用支持向量机（support vector machine,SVM）分类方法结合人机交互信息提取方法完成了3期永乐群岛的珊瑚礁底质类型分类,并通过珊瑚礁底质类型变化分析了永乐群岛珊瑚礁白化特征。主要结论包括：（1）提出了一种珊瑚礁白化程度分级的方法,将永乐群岛白化状况分为轻度、中度、重度和严重白化4个等级,通过分析发现在监测时段内14个岛礁中有13个发生了不同程度的白化,其中10个发生了重度白化（白化率20%以上）,1个严重白化（羚羊礁,白化率为33.36%）;（2）根据监测数据统计,上述珊瑚岛礁的白化主要是由珊瑚丛生区白化引起的,2005-2018年永乐群岛珊瑚丛生区白化面积占总的发生白化区域面积的70.55%;（3）14个岛礁中只有甘泉岛的活珊瑚覆盖在逐渐增加,活珊瑚覆盖面积由2006年5月10日的87.13 hm²增加到2018年3月7日的107.80 hm²。     

SPOT5数据东沙环礁珊瑚礁遥感能力分析

对于大面积的大比例尺珊瑚礁遥感制图而言,SPOT5数据是一种高性价比卫星遥感资料.以Quickbird2数据对东沙环礁珊瑚礁的分类、解译的矢量结果作为该区域实际的珊瑚礁分布,以此为基础分析SPOT5数据的珊瑚礁遥感制图能力.SPOT5只有两个水体穿透信道,从基于光谱数据的分类角度看,以XS1通道为准的珊瑚礁信息提取易将高反射的沙底质归为珊瑚礁;以XS2通道为准的珊瑚礁分布制图存在提取不足问题.由于空间分辨率提高,对潟湖淤泥质中的珊瑚礁提取能力较强,要优于ETM数据.结合ETM数据及PCA融合后的SPOT5的遥感解译结果,能提高SPOT5数据的制图能力.     

Quantifying the reefscape transformation of a coastal Caribbean coral reef during a phase shift and the associated coastal landscape change

Caribbean coral reefs are under strong natural and human pressures and many have undergone phase shifts as a result of local and global change. However few studies have quantified the extent of these phase shifts and the potential impacts that they have on coral reef communities. A temporal comparative analysis of several coral reefscape and landscape metrics was conducted for data from Mahahual, Quintana Roo, Mexico, between the years 2000 and 2006, when a phase shift occurred. Landscape metrics were calculated from coral reef and coastal cover maps obtained by multispectral satellite image classification using IKONOS satellite imagery. These metrics showed that the coastal landscape and reefscape of Mahahual lost 85 ha of vegetation cover and 43 ha of coral cover over 6 years, respectively. Coastal landscape transformation was induced by the construction of a cruise ship pier and multiple associated tourist developments along the coast, such as hotels and restaurants, meanwhile alteration of the reefscape may be associated with potential stressors such as coastal development, bleaching events and hurricanes.     

基于面向对象影像分析方法的我国西沙珊瑚礁地貌单元信息提取

珊瑚礁地貌单元的空间分布对于理解珊瑚礁生态系统的地质构造过程具有重要作用。然而,基于像素的影像分析方法往往获取不到较高精度的分类结果。本文基于面向对象的影像分析方法,利用Landsat 8卫星影像数据对我国西沙地区的珊瑚环礁进行了地貌单元的遥感信息提取。借鉴于美国千年珊瑚礁测绘项目的工作成果,本文首先针对研究区特点定义了十类珊瑚礁地貌单元类型。然后,基于对象的多层次关系特点,并综合利用对象的光谱、形状、上下文关系等特征,建立合适的分类规则集,获取了研究区较大尺度的珊瑚环礁地貌分区图,其分类精度普遍高于80%。虽然研究结果表明基于面向对象的影像分析方法可以有效的进行珊瑚礁遥感信息提取,但其规则集的可移植性仍需要今后的工作加以改善。     

霞浦核电基地海洋生物放射性本底水平及辐射剂量评价

为掌握霞浦核电基地海洋生物的放射性本底水平,在其周边50 km范围内采集5类9种海洋生物样品,测量其中的天然放射性核素²³⁸U、²³²Th、²²⁶Ra、⁴⁰K,以及人工放射性核素¹³⁷Cs、¹³⁴Cs、⁹⁰Sr、⁵⁸Co、⁶⁰Co、⁵⁴Mn、^110mAg、⁶⁵Zn的活度浓度并进行辐射剂量评价。结果显示,所有样品中¹³⁴Cs、⁵⁸Co、⁶⁰Co、⁵⁴Mn、^110mAg、⁶⁵Zn的活度浓度均低于最小可探测活度浓度,²³⁸U、²³²Th、²²⁶Ra、⁴⁰K、¹³⁷Cs和⁹⁰...     

融合地理空间认知的珊瑚礁地貌单元高分遥感分类方法

近年来,在人为活动和自然因素的影响下,全球珊瑚礁面临着大规模退化问题,开展珊瑚礁监测研究对珊瑚礁生态系统评估、修复和保护工作具有重要作用。本文以西沙群岛北礁和华光礁为研究区,应用2015年高分二号（GF-2）和WorldView-2高空间分辨率卫星影像和现场调查数据,基于不同珊瑚礁地貌单元的空间位置特征,提出了融合地理空间认知（Geo-Spatial Cognition,GSC）的珊瑚礁地貌单元高分遥感分类方法。研究结果表明：针对因空间位置不同和底质组成高度近似导致珊瑚礁地貌单元漏分和错分的问题,本文提出的方法更能有效获取精准的珊瑚礁地貌单元信息。其中,融合地理空间认知的随机森林（Integrating Geo-Spatial Cognition-Random Forest,GSC-RF）方法展现出了最优的分类表现,在北礁和华光礁珊瑚礁地貌单元分类中总体精度分别为98.06%和91.93%,Kappa系数分别为0.98和0.91。相比于仅使用光谱信息的随机森林（Random Forest,RF）、多元逻辑回归（Multinomial Logistic Regression,MLR）和支...     

基于QuickBird影像上珊瑚礁发育状况监测实验研究

珊瑚礁生态系统具有很高的生物多样性和重要的生态功能。20世纪80年代以后全球范围内珊瑚礁的大面积退化引起了人们广泛的关注。利用高分辨多光谱QuickBird影像,基于珊瑚礁几何参数与发育指数对南沙典型岛礁发育进行遥感监测,在珊瑚礁体迎风面水域由破波形成的纹理特征表明了海面粗糙度与水下礁坪的发育特性。结果表明,南沙岛礁受地质与气候的影响发育程度不一,半月礁发育较好,发育指数为0.38,仙娥礁发育指数为0.27。建立几何参数等指标能够监测南沙珊瑚礁的发育状况,可对珊瑚礁的保护提供科学依据。     

南海珊瑚岛礁地貌遥感识别研究

南海珊瑚岛礁总体处于退化状态,卫星遥感可以实现珊瑚礁区底质演变的监测.本文以西沙群岛海域赵述岛为研究区域,以Landsat-8卫星遥感影像为研究数据,对浅海地貌变化进行遥感分析.将影像进行水深校正和波段组合,使用最大似然法进行珊瑚礁地貌分类,可以清晰的识别灰沙岛、礁坪、礁前坡、泻湖坡、暗滩和海面六种地貌类型,以Worl...     

Spatial discordance in fish,coral, and sponge assemblages across a Caribbean atoll reef gradient

Certain biodiversity patterns on coral reefs are generally consistent but we still lack fundamental insight into how assemblages vary across spatially heterogeneous reef systems. We compared fish, coral, and sponge assemblages across a symmetrical physiographical gradient (windward forereef, lagoon patch reef, leeward forereef) of the Glover's Reef atoll, Belize. Species richness of fishes and corals was highest in the deep habitat (15 m) on the windward forereef. Sponges were diverse and abundant on both deep windward and leeward forereefs but not on the exposed shallow (5 m) windward forereef. Fish and benthic assemblages were relatively distinct in each reef zone, with the lagoon patch reef communities consisting of a combination of leeward and windward species. Nevertheless, there were no clear patterns in community similarity matrices of fish and benthic assemblages, suggesting that overall coral and sponge assemblages had weak or no direct association with patterns in fish assemblages. A closer examination of fish trophic groups indicated that planktivores and predators were predictably associated with depth, whereas herbivores were associated with shallow protected reefs. None was specifically associated with spatial location along the atoll gradient. These patterns of diversity distribution are important for identifying spatial conservation priorities. A Marine Protected Area (MPA) at Glover's Reef encompasses substantial windward forereef and patch reef habitats. A much lesser extent of protection is afforded the leeward forereef that supports faunal assemblages that are unique and productive, if not as diverse as the windward forereef. Isolated coral atolls can serve as ideal systems to study spatial heterogeneity and biodiversity patterns, but more experimental studies are needed to reveal the mechanistic processes underlying these patterns.     

Wave set-up on coral reefs. 1. Set-up and wave-generated flow on an idealised two dimensional horizontal reef

Wave set-up may be significant in determining water levels on coral reefs particularly in microtidal environments and hence is an important factor for the design of reef-top structures and for the stability of reef-top islands. Laboratory experiments have been made on a two dimensional model of an idealised horizontal reef under two different conditions corresponding to a fringing reef (or closed lagoon) situation and a platform reef (or open lagoon) situation. Both wave set-up on the reef-top and the wave-generated flow across the reef were measured and related to wave and tide level conditions.All other factors being the same, wave set-up is greatest at low tide levels whereas wave-generated flow is greater at higher tide levels. The magnitude of the set-up on a platform reef with a wave-generated flow is less than on a fringing reef without any net flow by an amount equal to the velocity head of the flow across the reef. Dimensionless parameters and q/√gH_o³ are found to be functions of relative submergence parameters h_r/H_o or . For values of ( ) H_o > 1 waves break on the reef-top and radiation stress theory can be used to calculate set-up. For ( )H_o < 0.7 waves break on the reef-face and set-up is determined by broadcrested weir control at the reef-edge. (The symbols are defined as follows: g is gravitational acceleration; h_r is still water depth over horizontal reef-top; H_o is offreef wave height (equivalent deep water value); q is discharge per unit length of reef edge; T is wave period and is maximum wave set-up on reef-top.)     

Contrasting patterns in the abundance of fish communities targeted by fishers on two coral reefs in southern Mozambique

Coastal populations of maritime countries in eastern Africa rely on fish as a primary source of protein, but baseline information on the abundance of fish communities on these coastlines is often lacking. We used baited remote underwater video stations to compare the abundance and diversity of reef fishes targeted by fishing at two sites in southern Mozambique, one at Lighthouse Reef within the Bazaruto Archipelago National Park and the other to the south at San Sebastian Reef on the San Sebastian Peninsula. Fish that are known targets of fisheries (mostly small-scale and artisanal) had an abundance that was almost three-times greater at San Sebastian Reef (80.22 ind. h^–1 [SE 18.00]) than at Lighthouse Reef (29.70 ind. h^–1 [SE 8.91]). Similarly, there was greater mean species richness at San Sebastian Reef (38.74 species h^–1 [SE 2.79]) than at Lighthouse Reef (25.37 species h^–1 [SE 3.66]). The main drivers of targeted fish abundance were habitat and depth, with shallow (<15 m) and mixed reef areas having the greatest abundance and richness. More sampling was done over sand habitat at Lighthouse Reef, which likely led to the lower abundance and species richness observed at this site; however, that finding could also be attributable to the fact that protection is provided to only a section of available coral reef habitat in a small area. Nevertheless, fish community structure was comparable between the sites, with similar proportions of carnivores (78–81%), herbivores (12–14%) and omnivores (7–8%). Our findings highlight the variation in species abundance and assemblages of coral-reef fish targeted by fishing in Mozambique and emphasise the importance of localised environmental variables as a driver of these patterns. To ensure maximum protection of Lighthouse Reef fish communities, we recommend an extension of the no-take zone to include the entire reef complex.     

基于Sentinel-2卫星影像的海南西岛珊瑚礁识别和变化分析

珊瑚礁是海洋中最重要的生态系统之一, 近年来在全球气候变化和人为干扰加剧的影响下, 我国南海珊瑚礁总体处于快速退化状态。以海南西岛珊瑚礁为例, 基于Sentinel-2系列卫星10 m空间分辨率影像, 利用面向对象分类法(object-based image analysis, OBIA)对2017年12月~2018年3月和2021年12月两个时期的海南西岛珊瑚礁底质进行了识别分类, 并进行珊瑚礁面积变化分析。将2021年12月的分类结果与现场调查数据进行对比验证, 总分类精度和Kappa系数分别为83.3%和0.71。对比两个时期珊瑚礁底质分类结果表明, 西岛西侧珊瑚礁覆盖面积未出现明显变化, 东侧珊瑚礁显示恢复趋势。本文研究表明, 10 m地面分辨率卫星系列影像和面向对象的阈值分类方法可以对海南西岛珊瑚礁进行较为准确的识别和变化分析, 监测结果可为海南岛沿岸西岛等小型岛礁珊瑚保护及修复提供参考。     

Sublittoral seaweed communities on natural and artificial substrata in a high-latitude coral community in South Africa

Coral mortality may result in macroalgal proliferation or a phase shift into an alga-dominated state. Subtidal, high-latitude western Indian Ocean coral communities at Sodwana Bay on the KwaZulu-Natal coast, South Africa, have experienced some mortality because of warm-water anomalies, storms and other causes, but the response of the macroalgae is unknown. We investigated the abundance and diversity of benthic algae on different hard natural substrata (dead digitate, brain and plate corals and beach rock) on Two-Mile Reef, Sodwana Bay. We also compared algal communities colonising ceramic, marble and pretreated ceramic tiles placed on the reef for six months. We identified 95 algae (14 Chlorophyta, 11 Phaeophyceae, 69 Rhodophyta and one cyanobacterium). Assemblages on natural and artificial substrata were dominated by the brown alga Lobophora variegata (Lamouroux) Womersley ex Oliveira and non-geniculate corallines (Rhodophyta, Corallinaceae). Cluster and ordination analyses revealed that the algae showed no affinity for particular substrata, whether natural or artificial. Algal cover was occasionally higher on rougher tiles and crustose corallines were significantly more abundant on marble than ceramic tiles. Two-Mile Reef had 23.1% dead and 48.4% live scleractinian coral cover, where dead corals were colonised indiscriminately by many small algal species, but there was no evidence of algal proliferation. The results provide a baseline for monitoring this high-latitude reef system.     

A Benthic Terrain Classification Scheme for American Samoa

Coral reef ecosystems, the most varied on earth, continually face destruction from anthropogenic and natural threats. The U.S. Coral Reef Task Force seeks to characterize and map priority coral reef ecosystems in the U.S./Trust Territories by 2009. Building upon NOAA Biogeography shallow-water classifications based on Ikonos imagery, presented here are new methods, based on acoustic data, for classifying benthic terrain below 30 m, around Tutuila, American Samoa. The result is a new classification scheme for American Samoa that extends and improves the NOAA Biogeography scheme, which, although developed for Pacific island nations and territories, is only applicable to a maximum depth of 30 m, due to the limitations of satellite imagery. The scheme may be suitable for developing habitat maps pinpointing high biodiversity around coral reefs throughout the western Pacific.     

A Benthic Terrain Classification Scheme for American Samoa

Coral reef ecosystems, the most varied on earth, continually face destruction from anthropogenic and natural threats. The U.S. Coral Reef Task Force seeks to characterize and map priority coral reef ecosystems in the U.S./Trust Territories by 2009. Building upon NOAA Biogeography shallow-water classifications based on Ikonos imagery, presented here are new methods, based on acoustic data, for classifying benthic terrain below 30 m, around Tutuila, American Samoa. The result is a new classification scheme for American Samoa that extends and improves the NOAA Biogeography scheme, which, although developed for Pacific island nations and territories, is only applicable to a maximum depth of 30 m, due to the limitations of satellite imagery. The scheme may be suitable for developing habitat maps pinpointing high biodiversity around coral reefs throughout the western Pacific.     

珊瑚礁岩心声速垂向跃变及其指相意义

本文在南沙群岛永署礁南永1井珊瑚礁岩心声速测量的基础上，研究了珊瑚礁岩心声速的垂向跃变特征和相应地层沉积相变及地层侵蚀间断面的关系，分析了珊瑚礁岩心相变造成其声速跃变的原因，阐明了海平面升降形式珊瑚礁地层侵蚀间断面和产生相变的具体过程, 明了珊瑚礁岩心声速垂向跃变与相应地层古气候和海平面变化的关系，该项研究在岛礁工程建设和礁灰岩区石油勘探声学测井以及西太平洋边缘海古海洋学研究学方面具有重要的实用价值和理论意义。     

基于WorldView-2和GF-2遥感影像的赵述岛礁坪底质变化研究

以西沙群岛海域赵述岛礁坪为研究区域,应用2010年的WorldView-2和2015年的GF-2两期高分辨率卫星遥感影像数据,结合现场水下珊瑚礁照片和视频资料,建立了赵述岛礁坪底质类型遥感分类体系,分别构建了针对WorldView-2遥感影像和GF-2遥感影像的珊瑚礁底质分类决策树模型,并通过对两期遥感影像的底质类型提取结果的变化分析,完成了赵述岛礁坪退化区域的提取。结果表明:(1)WorldView-2影像的分类决策树具有91%的总体分类精度和0.89的Kappa系数,GF-2影像的分类决策树具有更高的分类精度;(2)6年期间研究区大约1/4的珊瑚礁分布区发生了退化;(3)最突出的自然变化是礁前区大面积的珊瑚丛生区转变成藻脊,结合相关资料认为东北季风、热带气旋和温度上升的综合影响是驱动因素;(4)赵述岛西侧的藻脊、珊瑚沉积区大面积转化为珊瑚砂和深水区域,原因是航道和码头的开发活动。研究分析了6年间赵述岛礁坪底质的退化状况,并分析原因,为珊瑚礁底质分类提供方法,并为西沙群岛的珊瑚礁监测和保护提供了有效资料和手段。