大菱鲆(Scophrhalmus maximus)不同生长阶段体重的遗传参数和育种值估计

采用非求导约束最大似然法(DFREML)进行了大菱鲆不同生长阶段体重的遗传参数和育种值研究,每一生长阶段分别对4种不同动物模型估计遗传参数的差异进了比较.不同模型中对全同胞家系效应和日龄协变量作了不同的考虑:模型A,不考虑全同胞家系效应和日龄协变量:模型AD,仅考虑日龄协变量;模型AE仅考虑全同胞家系效应;模型AFD,同时考虑全同胞家系效应和日龄协变量.结果表明,6月龄利用模型AF,3月龄、9月龄、12月龄、15月龄利用模型AFD对遗传参数和育种值进行估计较为适合.利用育种值选择和表型值选择两种方法分别进行了家系选择和个体选择的效率比较,结果表明,在每一生长阶段依据育种值选择的效率均高于表型值选择的效率.利用不同生长阶段的家系育种值以及亲本育种值分别进行了家系选择比较和亲本选择比较,结果表明,在不同生长阶段,按家系、父本和母本的育种值分别排序,前50%的相同率和育种值的相关系数均为9-12月龄较6-9月龄的提高幅度比其它相邻阶段显著增加,推测家系提前筛选的时间以及父本和母本选择的时期均不低于9月龄.     

大菱鲆体重性状遗传参数及选育遗传进展研究

本研究估计了大菱鲆收获体重性状的遗传参数和选育遗传进展。数据共包括3个世代（G0,G1,G2）的508个全同胞家系10952尾个体。G0,G1,G2的体重估计遗传力分别为0.11±0.08,0.18±0.09,0.17±0.07;世代间估计遗传力为0.19±0.04。每一世代母本和共同环境效应分别为0.10±0.04,0.14±0.04,0.13±0.03;世代间为0.12±0.01。G0和G1世代选择差分别为,18.24g和21.19g。对应的G1和G2世代的遗传进展为22.06g,11.93g;百分比表示分别为6.36%,3.52%。连续两代选择之后总遗传进展为10.10%。以上结果说明针对大菱鲆体重性状的选育项目是成功的。     

凡纳滨对虾(Litopenaeus vannamei)不同生长阶段体重的遗传参数和育种值估

为准确评估凡纳滨对虾（Litopenaeus vannamei）生长性状的育种值,构建了4种单性状动物模型,并采用似然比和AIC值对不同模型进行比较分析并选出最优模型,应用最佳线性无偏预测法（BLUP法）对凡纳滨对虾不同生长阶段体重的遗传参数和育种值进行估计。综合分析得出模型AFD为最优模型,其在60、105和150日龄的遗传力估计值分别为0.39±0.07、0.25±0.04和0.22±0.05,可见以体重对凡纳滨对虾进行选择育种具有较大的潜力,下一代可获得较大的遗传进展。对不同生长阶段体重性状进行育种值选择和表型值选择的比较,两种选择方法选取前10%个个体的育种值平均值分别为3.19、9.95、13.07g和2.55、7.36、11.50g,前者比后者分别高出约20.06%、26.03%、12.01%,表明在每一生长阶段依据育种值选择比表型值选择更具优势。还对不同生长阶段的家系及亲本进行选择比较,结果表明,家系与亲本育种值相关性的变化趋势均为生长期越长,相关性越高,推测对家系及亲本进行提前筛选的时期至少在105日龄以上。     

大菱鲆（Scophthalmus maximus）胚胎发育的形态学和组织学研究

采用显微镜和连续切片技术,观察了大菱鲆胚胎发育阶段的形态学和组织学特征。结果表明,大菱鲆胚胎发育主要经历6个时期;在14℃,胚体经108h即可孵化出膜。胚胎在64细胞期出现纬裂,分裂球分化为外层的包被层和内部的深层细胞;多细胞期形成卵黄合胞体层;低囊胚期形成囊胚腔。受精后26h30min胚盾出现。胚盘下包65%时,头突...     

施氏獭蛤早期生长性状遗传参数和育种值估计

以2代选育群体为亲本、采用巢式设计构建21个施氏獭蛤(Lutraria sieboldii)全同胞家系,利用混合线性模型对30日龄和80日龄施氏獭蛤生长性状进行遗传参数和育种值估计.结果显示:施氏獭蛤早期发育过程中壳长生长速度较壳高快,性状间遗传相关系数范围为0.96～0.98,表型相关系数范围为0.77～0.96,均...     

大菱鲆低温生长遗传参数及相关的估计

The objectives of this present research were to assess the heritability of growth traits under low temperature conditions in turbot(Scophthalmus maximus L.), and to analyze the correlation between body weight(BW) and body length(BL). There were 536 individuals from 25 full- and half-sib families involved in this study. During the entire 90-day period, which was initiated at 233 dph(day old) and ended at 323 dph, the individuals' BW and BL were weighed consecutively six times every 18 days. The heritability of BW and BL and the correlation between these two traits were estimated based on an individual animal model with the derivative-free restricted maximum likelihood(DFREML) method. These results showed that the specific growth rates(SGR) of 25 families was from 0.75±0.11 to 1.05±0.14 under water temperature of 10.5–12°C. In addition, the heritability of BW and BL estimated under low-temperature were 0.32±0.04 and 0.47±0.06, respectively. The BW had a medium heritability(0.2–0.4), and the BL had a high heritability(0.45), which suggested that selection for increased weight and length was feasible. Moreover, there was potential for mass selection on growth. The genetic and phenotypic correlations between BW and BL were 0.95±0.01 and 0.91±0.01(P 0.01), respectively. A significant correlation between BW and BL showed that BL could be instead of BW for indirect selection, which could be effectively implemented in the breeding program.     

基于Gibbs抽样的贝叶斯方法估计大菱鲆生长和耐高温性状的遗传参数

为了开展大菱鲆耐高温选育工作,对其进行耐高温性状及其相关生长性状的遗传评估是非常必要的。以来源于英国、法国、丹麦和挪威4个国家的不同群体构建大菱鲆选育家系,利用F₁的20个和F₂的22个耐高温选育家系进行耐高温实验,统计耐高温评估指标（UTT）和相应的实验鱼体重（每个家系选取40-50尾实验鱼）。基于Gibbs抽样的贝叶斯方法,采用包含母性效应和不包含母性效应的两种动物模型,对大菱鲆耐高温（UTT）和生长性状的遗传力以及这两个性状间的遗传相关和表型相关进行分析。结果表明,基于不包含母性效应的动物模型估计的体重和耐高温性状的遗传力以及这两个性状之间的表型相关和遗传相关分别为0.239±0.141,0.111±0.080,0.075±0.026和-0.019±0.011。基于包含母性效应的动物模型估计的这4个值分别为0.203±0.115,0.055±0.026,0.047±0.034和-0.024±0.028,体重和耐高温性状的母性效应分别为0.050±0.017和0.013±0.004。母性效应对这两个性状的遗传评估有一定的影响。本文的研究结论为制订合理的大菱鲆耐高温育种规划提供了理论依据。     

大菱鲆（Scophthalmus maximus）大规模家系选育优良家系的生长发育规律

运用Logistic、Gompertz和von Bertalanffy3种生长模型分别对大菱鲆的5个优良家系E♂1×E♀2、F♂4×N♀3、F♂2×E♀4、E♂2×F♀1、F♂1×F♀4及对照组群体的生长曲线进行了拟合和比较分析。结果表明,家系E♂1×E♀2、F♂2×E♀4和E♂2×F♀1的最优拟合模型为Gompert...     

大菱鲆体重和形态性状的遗传动态分析

In order to elucidate the genetic mechanism of growth traits in turbot during ontogeny, developmental genetic analysis of the body weights, total lengths, standard lengths and body heights of turbots was conducted by mixed genetic models with additive-dominance effects, based on complete diallel crosses with four different strains of Scophthalmus maximus from Denmark, Norway, Britain, and France. Unconditional genetic analysis revealed that the unconditional additive effects for the four traits were more significant than unconditional dominance effects, meanwhile, the alternative expressions were also observed between the additive and dominant effects for body weights, total lengths and standard lengths. Conditional analysis showed that the developmental periods with active gene expression for body weights, total lengths, standard lengths and body heights were 15–18, 15 and 21–24, 15 and 24, and 21 and 27 months of age, respectively. The proportions of unconditional/conditional variances indicated that the narrow-sense heritabilities of body weights, total lengths and standard lengths were all increased systematically. The accumulative effects of genes controlling the four quantitative traits were mainly additive effects, suggesting that the selection is more efficient for the genetic improvement of turbots. The conditional genetic procedure is a useful tool to understand the expression of genes controlling developmental quantitative traits at a specific developmental period(t-1→t) during ontogeny. It is also important to determine the appropriate developmental period(t-1→t) for trait measurement in developmental quantitative genetic analysis in fish.     

利用限制性最大似然方法和贝叶斯方法估计大菱鲆生长性状的遗传参数。

Bayesian and restricted maximum likelihood(REML) approaches were used to estimate the genetic parameters in a cultured turbot Scophthalmus maximus stock. The data set consisted of harvest body weight from 2 462progenies(17 months old) from 28 families that were produced through artificial insemination using 39 parent fish. An animal model was applied to partition each weight value into a fixed effect, an additive genetic effect, and a residual effect. The average body weight of each family, which was measured at 110 days post-hatching, was considered as a covariate. For Bayesian analysis, heritability and breeding values were estimated using both the posterior mean and mode from the joint posterior conditional distribution. The results revealed that for additive genetic variance, the posterior mean estimate( δ_a~2=9 320) was highest but with the smallest residual variance,REML estimates( δ_a~2=8 088) came second and the posterior mode estimate( δ_a~2=7 849) was lowest. The corresponding three heritability estimates followed the same trend as additive genetic variance and they were all high. The Pearson correlations between each pair of the three estimates of breeding values were all high,particularly that between the posterior mean and REML estimates(0.996 9). These results reveal that the differences between Bayesian and REML methods in terms of estimation of heritability and breeding values were small. This study provides another feasible method of genetic parameter estimation in selective breeding programs of turbot.     

大菱鲆(Scophthalmus maximus)选育家系的构建和培育技术研究

采用巢式设计方法和人工采卵授精技术,对大菱鲆大规模家系的构建与培育技术进行研究。按照1雄配2雌的原则,选取英国、法国、丹麦和挪威4个群体的大菱鲆进行定向交配,并对大菱鲆早期发育阶段苗种进行了环境标准化和一级、二级、三级数量标准化培育。结果表明,构建父系半同胞家系的初始成功率不高,1/3父系半同胞家系的初始构建成功率≤20%;由于家系成功初始构建的不同步性,拉长了家系的培育时间,对同一发育阶段家系早期培育的同步性较差,导致对处于同一发育阶段、但在不同时期培育的家系所进行的环境标准化效果不好,每次数量标准化时,存在部分全同胞家系间数量差异显著。基于早期阶段家系构建和培育存在的问题,提出了拟解决的方法和对策,为大规模建立大菱鲆家系提供参考。     

大菱鲆(Scophthalmus maximus)细菌性疾病的研究现状

由弧菌科的细菌和其引发的细菌性疾病被认为是目前大菱鲆养殖业的主要危害之一。本文详细介绍了弧菌属的病原及一些典型的发病症状。对其他科属的一些病原菌，也作了相应描述，但它们的致病力相对弧菌科的病原菌致病力要弱，危害范围要小。最后简单介绍了目前细菌病几种可行的防治方法和思路。     

大菱鲆(Scophthalmus maximus)不同发育阶段视蛋白基因表达特征研究

视网膜视蛋白组成是动物识别光强与颜色视觉的基础,其会随着不同生长环境和发育阶段而发生变化。大菱鲆(Scophthalmus maximus)为重要的海水养殖鱼种,在发育过程中经历了从浮游生活到底栖生活的转变;生活习性的转变伴随着生存环境的变化,尤其是光照环境的变化。我们推测大菱鲆光照感知功能包括视蛋白种类及表达模式等,在不同阶段应有所不同,目前未见相关研究报道。本研究以1、4和9月龄大菱鲆为研究对象,通过qRT-PCR探查了不同阶段大菱鲆视蛋白基因表达的特征规律,通过分析三个发育阶段的视蛋白基因表达比例,推测鱼体光谱敏感性变化规律。结果表明,红视蛋白(LWS)基因表达量随鱼体发育逐渐降低,视紫红质(RH1)、紫外视蛋白(SWS1)和蓝视蛋白(SWS2)随鱼体发育表达量逐渐升高,而绿视蛋白(RH2)中高表达的RH2b1无显著变化。LWS表达比例由1月龄57.2%降至九月龄11.4%,RH2b1表达比例由1月龄29.9%升至九月龄73.3%。随着大菱鲆由早期浮游生活转入底栖生活,表达占主导地位的视蛋白,逐渐由LWS转变为RH2b1,其光谱敏感性可能由红色敏感向绿色敏感转变。大菱鲆视蛋白在不同发育阶段表达的特征变化引发的光谱敏感性变化,可认为是其对不同光环境的适应策略。     

饥饿对大菱鲆(Scophthalmus maximus)雌核发育二倍体仔鱼前期生长的影响

针对饥饿对大菱鲆雌核发育二倍体仔鱼前期生长发育的影响进行研究,并对仔鱼的饥饿不可逆点进行了测定。结果表明,水温14.5—16℃的培育条件下,大菱鲆雌核发育饥饿仔鱼卵黄于5—6日龄消耗殆尽,油球6—7日龄消耗殆尽;饥饿仔鱼最高初次摄食率出现在4日龄,为85.3%;仔鱼的饥饿不可逆点出现在8日龄;饥饿仔鱼全长生长速度显著慢于投喂仔鱼,6日龄后全长呈负增长,并且出现胸角突出、体色暗黑、消化道萎缩等较为明显的饥饿特征。本实验同时对大菱鲆常规二倍体仔鱼的饥饿耐受情况对照研究,表明,常规二倍体饥饿仔鱼的卵黄和油球消耗规律、初次摄食率变化、PNR点及全长生长与雌核发育仔鱼无显著差异。     

不同脂肪水平下添加胆汁酸对大菱鲆(Scophthalmus maximus)幼鱼生长、体组成和脂肪代谢的影响

在10%和18%两个脂肪水平下,分别添加0%、1.5%的胆汁酸,配制成四种等氮饲料,投喂初始平均体重为(45.78±0.11)g的大菱鲆(Scophthalmus maximus)幼鱼8周,研究两个脂肪水平下添加胆汁酸对大菱鲆幼鱼生长、体组成和脂肪代谢的影响。结果表明:饲料脂肪水平升高或添加胆汁酸均能显著提高大菱鲆幼鱼增重率、特定生长率、蛋白质效率,降低饵料系数(P0.05);相同脂肪水平下,添加胆汁酸显著提高了实验鱼的生长,降低了肝体比(P0.05)。随着饲料脂肪水平的升高,组织中粗脂肪含量呈上升的趋势;而添加胆汁酸降低了组织中脂肪的蓄积,但全鱼与肌肉中水分、粗蛋白含量主要受饲料中胆汁酸水平的影响(P0.05)。胆汁酸能显著降低大菱鲆幼鱼肌肉PUFA含量(P0.05),增加SFA、MUFA含量。饲料添加胆汁酸能降低实验鱼血清甘油三酯、总胆固醇、高密度脂蛋白胆固醇、低密度脂蛋白胆固醇含量及谷草转氨酶、谷丙转氨酶活性(P0.05),但饲料脂肪水平对血液生化指标的影响呈相反趋势。饲料脂肪水平的升高或添加胆汁酸均能提高实验鱼肝脏脂蛋白脂酶、肝脂酶、总脂酶和肠道脂肪酶活性(P0.05),且胆汁酸和脂肪二者之间的交互作用对脂肪代谢有显著影响(P0.05)。综上所述,在2个脂肪水平下添加胆汁酸均能促进大菱鲆幼鱼的生长,提高饲料利用状况,促进脂肪消化吸收,降低组织中粗脂肪含量。     

大菱鲆(Scophthalmus maximus)抗鳗弧菌(Vibrio anguillarum)性状的微卫星分子标记研究

采用微卫星分子标记技术分析验证了133对微卫星分子标记,以期为大菱鲆(Scophthalmus maximus)育种提供合适的抗鳗弧菌分子标记。实验鱼经鳗弧菌(Vibrio anguillarum)感染,分为非抗病组与抗病组。对两组鱼PCR扩增出的差异条带进行个体统计,再进行微卫星位点与抗鳗弧菌的相关性分析,并分析对比了两组鱼的遗传多样性。结果表明,微卫星位点Sma-USC108、Sma-USC141的等位基因片段分别在215bp和200bp与抗鳗弧菌性状的正相关性极显著,相关系数分别达到0.363和0.407(P0.01);微卫星位点FF0911、Sma-USC62、Sma-USC279的等位基因片段分别在189bp、163bp和236bp与抗鳗弧菌性状的负相关性极显著,相关系数分别达到–0.377、–0.364和–0.363(P0.01)。经过二次验证,最终确定Sma-USC141和FF0911两个微卫星位点可指导大菱鲆抗鳗弧菌的辅助育种。两组大菱鲆的群体遗传多样性分析对比表明:抗病群体与非抗病群体的遗传变异水平较低,两个群体的遗传多样性水平相当。     

凡纳滨对虾(Litopenaeus vannamei)不同生长阶段体重的遗传参数和育种值估计

为准确评估凡纳滨对虾(Litopenaeus vannamei)生长性状的育种值,构建了4种单性状动物模型,并采用似然比和AIC值对不同模型进行比较分析并选出最优模型,应用最佳线性无偏预测法(BLUP法)对凡纳滨对虾不同生长阶段体重的遗传参数和育种值进行估计。综合分析得出模型AFD为最优模型,其在60、105和150日龄的遗传力估计值分别为0.39±0.07、0.25±0.04和0.22±0.05,可见以体重对凡纳滨对虾进行选择育种具有较大的潜力,下一代可获得较大的遗传进展。对不同生长阶段体重性状进行育种值选择和表型值选择的比较,两种选择方法选取前10%个个体的育种值平均值分别为3.19、9.95、13.07g和2.55、7.36、11.50g,前者比后者分别高出约20.06%、26.03%、12.01%,表明在每一生长阶段依据育种值选择比表型值选择更具优势。还对不同生长阶段的家系及亲本进行选择比较,结果表明,家系与亲本育种值相关性的变化趋势均为生长期越长,相关性越高,推测对家系及亲本进行提前筛选的时期至少在105日龄以上。     

利用父母本微卫星标记估计大菱鲆(Scophthalmus maximus L.)幼鱼生长性状的遗传参数

The estimation of genetic parameters has played an important role in animal selective breeding for growth traits.Recently studies show that molecular markers can be incorporated into genetic evaluations. In order to improve the performance of an incomplete pedigree(i.e, only parents are known) in the genetic evaluations, 12 microsatellite markers have been applied in the estimation of the genetic parameters for body weight in a farmed population(n=1 890) of juvenile turbot(Scophthalmus maximus L.). A new relatedness called parental molecular relatedness(PMR) is estimated based on results of genotyping of 48 parents(31 males, 17 females) with microsatellites markers. The feasibility of PMR in estimation of genetic parameters is verified by comparison with pedigree related(PR) which is obtained from a complete pedigree. The results demonstrate that a high correlation(0.872) between them is found. Heritabilities are estimated using the PMR(0.52±0.13) and PR(0.55±0.22) with the same animal model. A cross-validation shows that the predictive abilities of models using the PMR and the PR are identical(0.81). From that, a conclusion can be made that PMR and PR predicted genetic values equally well in a population of juvenile turbot. Therefore PMR can be applied as an alternative of the PR when only parents are known. However, for a better performance, more markers and more families should be included in a further study.     

大菱鲆(Scophthalmus maximus)蛋白质二硫键异构酶SmPDIA3的表达分析和功能验证

本研究利用SMART-RACE技术克隆了大菱鲆SmPDIA3基因。SmPDIA3基因cDNA序列全长2083bp,包括1479bp的开放阅读框,编码492个氨基酸,GenBank登录号：MG765516。组织表达分析发现：SmPDIA3基因在肠、鳃、肝脏等组织中均有表达,其中在肝脏中表达量最高,脑中最低。进一步研究了温度胁迫后SmPDIA3基因在肠和肝脏组织中的表达变化规律,发现随着胁迫温度的升高,SmPDIA3基因的相对表达量总体上升,并在28℃时达到最大。利用原核表达技术,构建了pET-28a-PDIA3原核表达载体,IPTG诱导后融合蛋白主要在上清中表达。将上清中的蛋白分离纯化后,利用Western blot技术验证了目的蛋白的准确性。将纯化后的目的蛋白浓缩后,利用BCA蛋白浓度测定试剂盒测得蛋白浓度为243.18μg/mL。最后设计变性溶菌酶的复性实验,验证了SmPDIA3蛋白具有分子伴侣功能,能够辅助变性蛋白的正确折叠。     

大菱鲆(Scophthalmus maximus)、星斑川鲽(Platichthys stellatus)及其杂交种的形态学分析

利用方差分析、聚类分析、判别分析和主成分分析等多元分析方法,对大菱鲆、星斑川鲽及其杂交种(大菱鲆♀×星斑川鲽♂)的可数性状和可量性状进行了分析。结果表明:(1)可数性状中,除腹鳍鳍条数外,杂交种与母本大菱鲆差异不显著,而与父本星斑川鲽差异极显著。(2)可量性状中,杂交种和大菱鲆差异不显著的性状占可量性状的45%,而与星斑川鲽都为显著差异。可量性状的杂种指数平均值为15.56,显示杂交种可量性状总体属于偏母本。(3)聚类分析表明,杂交种与大菱鲆形态较为接近,先聚为一支,再与星斑川鲽聚为一支。(4)主成分分析表明,共获得了4个主成分,其累积总变异的贡献率为73.49%。主成分散点图表明杂交种在形态差异上独立于大菱鲆和星斑川鲽。(5)判别分析表明,利用10个对结果影响贡献率较大的参数分别构建了其判别函数,对大菱鲆、星斑川鲽和杂交种的综合判别准确率达到98.9%,判别效果非常显著。研究认为,杂交种的形态与母本比较相似,但可以通过形态判别分析将三者进行区分判别。