Main meiofauna taxa as an indicator for assessing the spatial and seasonal impact of fish farming

The present study aimed to establish potential indicators of fish farming pollution in muddy substrate, by means of meiofauna, and to test whether the effect of the fish farm is more important to determine the meiofauna community than the seasonal environmental conditions. Sampling was performed in spring, after several months of light feeding, and in summer, at high food supply. Samples were collected in three directions at various distances from the floating cages. Harpacticoid copepods and kinorhynchs, whose abundance decreased under the cages, were put forward as indicator taxa. However, harpacticoid copepods were sensitive to fish farm only, while kinorhynchs showed responsiveness to fish farm and to seasonal environmental conditions. Total meiofauna density was dependent on season sensu stricto. The nMDS clearly showed a ‘cage community’ and ‘control community’ in both sampling occasions; therefore it is a good tool for impact assessment.     

The use of meiofauna as an indicator of benthic organic enrichment associated with salmonid aquaculture

Sediment chemistry and meiofaunal samples were collected in the Broughton Archipelago, British Columbia, to examine the relationship between sediment variables and meiofauna diversity across near- and far-field gradients surrounding several finfish aquaculture operations. The sediment variables examined consisted of free sulfide concentrations, redox potential (E(NHE)), organic content, and sediment grain size. A strong trend between sediment texture and organic content was observed across all sampling locations, which reflected a wide range of sediment types (sand-silt) that exist within the Broughton Archipelago. The abundance of certain meiofaunal groups (kinorhynchs, crustaceans, polychaetes) declined in an asymptotic fashion with increasing free sulfide concentrations, an indicator of benthic organic enrichment. Within these relationships, low meiofaunal abundances occurred in fine sediments associated with higher organic contents. Although other groups (nematodes, foraminifera) showed a slight decline in abundance with increasing organic enrichment, a high amount of variability in abundance was observed at high free sulfide concentrations, rendering these groups not suitable as indicators of organic enrichment. This study reports both horizontal and vertical trends in meiofaunal distributions relative to free sulfide concentrations. The abundance of nematode and crustacean taxa decreased with sediment depth as well as increasing sulfide concentration, while polycheate abundance increased with increasing free sulfide concentration. The ratio of nematodes to copepods was also shown to represent the degree of organic loading associated with aquaculture operations and its application as an indicator of benthic impact is discussed.     

Marine meiobenthic and nematode community structure in Victoria Harbour,Hong Kong upon recovery from sewage pollution

Sediment quality, meiofaunal and nematode communities were monitored across six time points at two inside-harbour and three outside-harbour sites over a three-year period in Victoria Harbour, Hong Kong, after the implementation of a sewage treatment project. Twenty-one meiofaunal groups comprising mainly free-living nematodes and harpacticoid copepods and 188 species of free-living nematodes were identified. The outside-harbour area had a more diverse and significantly different nematode community structure as compared to that in the inside-harbour area. Such spatial difference was highly correlated with the total Kjeldahl nitrogen content of the sediments. Over the study period, there was no significant improvement in sediment quality within the harbour. However, in the last sampling time, an increase in meiofaunal abundance and a closer similarity in nematode composition between one of the inside- and outside-harbour sites suggested signs of recovery of the meiofauna as a response to abatement of sewage pollution.     

Marine meiobenthic and nematode community structure in Victoria Harbour, Hong Kong upon recovery from sewage pollution

Sediment quality, meiofaunal and nematode communities were monitored across six time points at two inside-harbour and three outside-harbour sites over a three-year period in Victoria Harbour, Hong Kong, after the implementation of a sewage treatment project. Twenty-one meiofaunal groups comprising mainly free-living nematodes and harpacticoid copepods and 188 species of free-living nematodes were identified. The outside-harbour area had a more diverse and significantly different nematode community structure as compared to that in the inside-harbour area. Such spatial difference was highly correlated with the total Kjeldahl nitrogen content of the sediments. Over the study period, there was no significant improvement in sediment quality within the harbour. However, in the last sampling time, an increase in meiofaunal abundance and a closer similarity in nematode composition between one of the inside- and outside-harbour sites suggested signs of recovery of the meiofauna as a response to abatement of sewage pollution.     

Structural and functional response of meiofauna rocky assemblages to sewage pollution

Despite meiofauna being one of the most popular tool for detecting the ecological effects of different sources of impact, the application of structured experimental designs to this benthic component is typically neglected, especially in subtidal rocky shores. In this study, an asymmetrical design was used to detect hard-bottom meiofaunal abundance and biodiversity response to sewage discharge. Sampling was carried out at a depth of 3-4 m by SCUBA diving, by means of a modified manual corer. Six replicate cores were collected at three sites (80-100 m apart), at each of three locations (one purportedly impacted [I] and two controls [Cs]). A total of 84,994 specimens were collected. The outfall affected meiofaunal assemblages in terms of taxon richness, by determining a significant reduction of the number of taxa in the disturbed location, and community structure, by causing functional changes in terms of a decrease of the abundance of nematodes and an increase of the hydrozoan component. Nematodes and syllid polychaetes showed significant lower average abundance at I. Multivariate analyses showed that both meiofaunal assemblage and syllids were significantly different at I compared with Cs. The sewage outfall also affected patterns of spatial distribution at the scale of site (100 m apart) and of replicate units (centimetres apart), both in syllids and in nematodes. Our results provide evidence that the selection of multiple controls is crucial to prevent the widespread risk of Type II error, highlighting the need of more accurate experimental designs when dealing with meiofauna.     

Influence of the ornamental red cherry shrimp Neocaridina davidi (Bouvier, 1904) on freshwater meiofaunal assemblages

Meiofauna serves as a link between microbial production and higher trophic levels, such as macroinvertebrates and juvenile fish. However, the role of meiofauna in the freshwater food web has not been accurately evaluated, and the influence of shrimp predation on freshwater meiofaunal assemblages is unknown. In this study, the predation effects of Neocaridina davidi, an ornamental freshwater shrimp native to inland water bodies in Asia, on meiofaunal density, biomass, structure, and secondary production were examined using model ecosystems (microcosms) that were sampled repeatedly over 42 days. Shrimp predation altered the structure of the meiofaunal community over the course of the experiment, in particular the density, biomass, and secondary production of nematodes, microcrustaceans, and oligochaetes. An analysis of the stomach contents of N. davidi indicated a high degree of omnivory and the frequent consumption of meiofaunal organisms. The results indicated that predation by the freshwater shrimp N. davidi depresses the overall abundance, biomass, and secondary production of meiofaunal assemblages. Moreover, they also provide insights into food-web ecology and the first evidence of freshwater shrimp predation on meiofaunal assemblages.     

Small-scale patterns of meiofauna in a bryophyte covered tufa barrier (Plitvice Lakes,Croatia)

Meiobenthic fauna is complex and essential part of the stream benthos and it is known as intermediaries from bacteria to higher trophic levels. However, the dynamics and mechanisms regulating this community at small-scale largely have been neglected. This study was carried out to determine meiofaunal dynamics in a small scale-patterns influenced by flow velocity and other abiotic and biotic factors. We examined meiofauna within bryophytes on a tufa barrier in Plitvice Lakes National Park using a detailed taxonomic approach of various meiofaunal groups and their feeding guilds. We choose three microhabitats (slow, medium, fast) differing significantly in flow velocity above bryophytes. Bdelloid rotifers were the most abundant group in microhabitat with highest flow velocity, while in other two microhabitats nematodes and monogonont rotifers prevailed in abundance. Data on environmental variables and main meiofaunal taxa and feeding guilds were analyzed using redundancy analysis. This analysis indicated that microfilter feeding guild (e.g. bdelloid rotifers) was strongly affected by interaction of flow velocity and POM fractions. Other feeding guilds were influenced by temperature, oxygen and/or pH and did not prefer high flow velocity. Suction-feeder nematodes and microfilter-feeder rotifers were dominant on temporal and spatial scale, indicating their good adaptations on frequently disturbed conditions that prevailed on bryophyte covered tufa barrier. Our results provide comprehensive survey of diversity, density as well as trophic structure of meiofauna in aquatic bryophytes. Differences in meiofaunal composition and density between three microhabitats suggest that the meiofauna is relevant indicator of environmental changes even at small-scale pattern.     

Amelioration of marine farming impact on the benthic environment using artificial reefs as biofilters

An in situ monitoring of the sediment characteristics and macrobenthic communities was undertaken at a marine fish culture site in subtropical waters of Hong Kong before and after the deployment of biofilters which were made of cement concrete artificial reef (AR) structures. According to the distance to the boundary of the fish cages, 6 points were selected as sampling stations: 2 at the fish cages, 2 near the boundary of the fish culture area, and 2 reference sites further away from the culture area. Bimonthly sediment samples were collected for analysis of silt-clay fraction (SCF), moisture content (MC), total organic carbon (TOC), total Kjeldahl nitrogen (TKN) and total phosphorus (TP). The macrobenthos (>0.5mm) present in the sediment were sorted, identified and enumerated. TOC, TKN and TP levels at the fish cage stations were consistently higher than those at the reference stations over the 1-year pre-AR and 2-year post-AR deployment monitoring period. The diversity of macrofauna was significantly reduced at the fish cage stations relative to the reference sites. The intermediary stations near the fish culture area showed a transitional state of disturbance. Over the 2-year post-AR deployment period, TOC, TKN and TP showed a decreasing trend at the fish cage and intermediary stations. More diverse macrofaunal communities were recorded at the fish cage stations, with species diversity H'increasing from 0-1 at the beginning of the AR deployment to H'>2 at the end of the study. The present results demonstrated that artificial reefs can improve the benthic abiotic environment and biotic conditions beneath fish rafts which are deteriorated due to farming activities.     

Influence of cage farming and environmental parameters on spatio-temporal variability of fish assemblage structure in a tropical reservoir of Peninsular India

Fish assemblage structure in Palair reservoir, a medium tropical reservoir along the river Paleru, a tributary of river Krishna in Southern India, was studied along the spatial gradient of the impoundment. The abundance and assemblage structure of wild fish aggregated around the fish cage units installed in the reservoir were assessed and compared with other sites. Seasonal sampling was carried out and fish community structure in terms of species composition and abundance, trophic guild, niche, tolerance, resilience and conservation status were analyzed. A total of 38 fish species were recorded wherein the family Cyprinidae dominated in the number of species (15) followed by Cichlidae and Channidae (3 each). Margalef richness index (d), Pielou’s evenness index (J’), Simpson’s index (1-λ) and Shannon index (H’) revealed significant variation across different zones. Species richness was maximum in the Site1 (d = 4.44–5.12), whereas the abundance of individuals was maximum at Site4 (H’ = 2.65–2.86) i.e. near cage in the lacustrine zone. The important species contributing to the dissimilarities among the zones were identified and percentage of their contribution was estimated using SIMPER analysis. Trophic guild of fishes indicated the dominance of omnivorous species followed by carnivores, indicating the heterotrophic phase of the reservoir. The spatial and seasonal variations in the fish assemblage structure were tested applying statistical analyses such as PERMANOVA and nMDS. The results indicated a positive impact of cage farming in supporting the wild fish fauna, influencing the large aggregations of fishes around the cages. The temporal variability in the cage-associated fish assemblage was related to recruitment periods of juveniles (e.g. E. maculates and E. suratensis in summer, and S. seenghala in monsoon seasons). The links between fish assemblages and environmental parameters were explored through DISTILM and the deterministic factors for fish abundance in the reservoir were phosphate, pH, dissolved Oxygen, total hardness and depth. The study also indicated the impacts of cage culture with record of accidental escapes of farmed fish to the reservoir system. The baseline information generated and recommendations formulated in the study are crucial for the conservation of fish diversity, fisheries enhancement and management planning of tropical peninsular reservoirs.     

Effects of mariculture on macrobenthic assemblages in a western mediterranean site

The effects of solid organic wastes from a marine fish farm on sediment was tested using macrobenthic fauna as biological indicators. Impact on benthic fauna was evaluated in the vicinity of a fish farm in the Tyrrhenian Sea (Western Mediterranean) between July 2001 and October 2002. Changes in benthic community structure were investigated using multivariate, distributional and univariate analyses (diversity indices, AMBI and M-AMBI). The results showed sharp disturbance of assemblages under the cages and no effects in the area more than 25 m from the cages. Sediment alterations were related to an increase in farmed biomass and its wastes, as well as to low current speed that allowed accumulation of organic matter on the sea floor. It was possible to follow the ecological succession from slightly altered assemblages to heavily polluted ones in the very short period of a single fish fattening cycle (15 months).     

Effects of nutrient enrichment derived from fish farming activities on macroinvertebrate assemblages in a subtropical region of Hong Kong

To study the correlation between nutrient enrichment derived from fish farming activities and changes in macrobenthic assemblages, a one-year field study was conducted in Kau Sai Bay marine fish culture zone of Hong Kong. Bimonthly sediment samples were collected at six stations: two at the fish cages, two near the boundary of the fish culture area, and two reference sites further away from the culture area. Sediment physico-chemical characteristics in terms of silt/clay fraction, moisture content, total organic carbon (TOC), total Kjeldahl nitrogen (TKN) and total phosphorus (TP) were analyzed. The macrobenthos (>0.5 mm) present in the sediment were sorted, identified and enumerated. On average, TOC, TKN and TP levels at the fish cage stations were 82.8%, 128.5% and 1315.7% higher than those at the reference stations, respectively. As a result, the N:P molar ratio was greatly reduced from 8.75 at the reference stations to 1.83 at the fish cage stations. Univariate and multivariate analyses revealed that diversity of macrofauna was significantly reduced and community structure differed at the fish cage stations relative to the reference sites. The intermediary stations near the fish culture area showed a transitional state of disturbance. Faunal diversity was negatively correlated with nutrient level, reflecting the adverse impacts of nutrient enrichment derived from fish farming activities on the benthic assemblages. Whilst in subtropical Asia-Pacific trash fish is the major feed for fish culture resulting in a higher nutrient loading and nutrient ratio accumulated in the sediment beneath the fish rafts, the effects of nutrient enrichment on macrobenthic assemblages are comparable to that in temperate waters owing to relatively high sediment metabolism rate and smaller fish culture scale in Hong Kong.     

Benthic meiofauna community composition at polluted and non-polluted sites in New Zealand intertidal environments

Meiofauna composition was investigated for six field sites, including polluted and non-polluted sites, within two regions (Auckland and Bay of Plenty) during winter (July-August 2004) in the North Island of New Zealand. Physico-chemical parameters were measured during the sampling period and meiofauna distribution and abundance were compared with these measured parameters. Analysis of meiofauna abundance indicated that foraminiferans, nematodes and ostracods were the taxa that contributed to the variability between field sites within the Auckland region. However, no clear taxa dominance was seen in the Bay of Plenty region. Comparison of meiofauna abundance and physico-chemical parameters was done using multivariate analysis (PRIMER). However, no clear relationships between the parameters were observed in any field site in either region. The Shannon-Weiner index of diversity did not show any clear differentiation between polluted and non-polluted field sites. Therefore, from the present study, the taxa or physico-chemical parameters used could not effectively characterise pollution at the investigated field sites.     

The influence of raw domestic sewage on density and distribution of meiofauna

The influence of raw domestic sewage on density and distribution of meiofauna in the sea bottom sediments in the Northern Adriatic Sea, in the area of Rovinj (Yugoslavia), was investigated, comparing meiofaunal density at the stations which are under direct influence of sewage and the stations which are far from the source of pollution. It is concluded that raw domestic sewage does not have a negative influence on the density and distribution of meiofauna, but Parker's index of pollution indicates that meiofauna at these stations were under stress.     

Amelioration of marine farming impact on the benthic environment using artificial reefs as biofilters

An in situ monitoring of the sediment characteristics and macrobenthic communities was undertaken at a marine fish culture site in subtropical waters of Hong Kong before and after the deployment of biofilters which were made of cement concrete artificial reef (AR) structures. According to the distance to the boundary of the fish cages, 6 points were selected as sampling stations: 2 at the fish cages, 2 near the boundary of the fish culture area, and 2 reference sites further away from the culture area. Bimonthly sediment samples were collected for analysis of silt-clay fraction (SCF), moisture content (MC), total organic carbon (TOC), total Kjeldahl nitrogen (TKN) and total phosphorus (TP). The macrobenthos (>0.5 mm) present in the sediment were sorted, identified and enumerated. TOC, TKN and TP levels at the fish cage stations were consistently higher than those at the reference stations over the 1-year pre-AR and 2-year post-AR deployment monitoring period. The diversity of macrofauna was significantly reduced at the fish cage stations relative to the reference sites. The intermediary stations near the fish culture area showed a transitional state of disturbance. Over the 2-year post-AR deployment period, TOC, TKN and TP showed a decreasing trend at the fish cage and intermediary stations. More diverse macrofaunal communities were recorded at the fish cage stations, with species diversity H′increasing from 0–1 at the beginning of the AR deployment to H′ > 2 at the end of the study. The present results demonstrated that artificial reefs can improve the benthic abiotic environment and biotic conditions beneath fish rafts which are deteriorated due to farming activities.     

Baseline study of the spatio-temporal patterns of reef fish assemblages prior to a major mining project in New Caledonia (South Pacific)

From 2008 onwards, the coral reefs of Koné (New Caledonia) will be subjected to a major anthropogenic perturbation linked to development of a nickel mine. Dredging and sediment runoff may directly damage the reef environment whereas job creation should generate a large demographic increase and thus a rise in fishing activities. This study analyzed reef fish assemblages between 2002 and 2007 with a focus on spatio-temporal variability. Our results indicate strong spatial structure of fish assemblages through time. Total species richness, density and biomass were highly variable between years but temporal variations were consistent among biotopes. A remarkable spatio-temporal stability was observed for trophic (mean 4.6% piscivores, 53.1% carnivores, 30.8% herbivores and 11.4% planktivores) and home range structures of species abundance contributions. These results are discussed and compared with others sites of the South Pacific. For monitoring perspectives, some indicators related to expected disturbances are proposed.     

A sediment quality triad assessment of the impact of copper mine tailings disposal on the littoral sedimentary environment in the Atacama region of northern Chile

A sediment quality triad (SQT) assessment was made of the impact of copper mine tailings disposal on littoral meiofaunal assemblages in the Atacama region of northern Chile. This situation is unusual in that the disposal is direct into the high-energy coastal system and not via a river estuary or other low-energy environment. This situation also allows for the examination of the impact of copper mine tailings in the absence of confounding effects from other pollutants. The three components of the SQT were: 1. an analysis of the bioavailable metals in both the sedimentary porewater and the adjacent seawater, 2. a microcosm bioassay of both sediments and seawaters using meiofaunal assemblages, and 3. quantitative field samples of the meiofaunal assemblages. Twelve study sites with varying degrees of impact were used, including three reference sites. The study identified that both the meiofaunal assemblage densities and taxa diversities decrease with increasing levels of bioavailable copper, that the Foraminifera and Harpacticoida are sensitive to copper, and that otoplanid Turbellaria are often characteristic of impacted sites; tailings also have both chemical and physical impacts on the environment. In some cases the physical impact of tailings is more important in excluding some organisms e.g. the interstitial polychaete, Saccocirrus sonomacus, from a site than is their chemical impact.     

Meiofaunal community structure in Thermaikos Gulf: Response to intense trawling pressure

Among the most important impacts of trawling is the disturbance of the benthic environment as well as the mortality of the larger benthic organisms, which is caused by the passage of the fishing gear. Meiofauna, which are among the smallest benthic organisms, may be more resistant to disturbance by trawling since they are likely to be re-suspended rather than killed by trawls. Their short generation times allow populations to withstand elevated mortality. In this study, we determined the effect of trawling disturbance, season and sediment type on the structure of meiofaunal communities in a commercial fishing ground in Thermaikos Gulf, north Aegean Sea, Greece. The trawling season is limited to 8 months between October and May. A grid of five nearshore stations was chosen along a north–south productivity gradient and an additional offshore station was included as a reference point. Sediment chemistry and meiofaunal community structure were studied before the trawling season started, as well as 1 and 4 months after the initiation of the fishing period. Results showed that there were no short term (30 days) trawling impacts on meiofauna in terms of abundance and community structure but that there were recognizable effects on the community structure of nematodes and the abundance of polychaetes. In contrast, most meiofaunal taxa displayed significant seasonal variability, 4 months after the initiation of the fishing period; however, other closely related factors such as temperature, sediment particle size and primary productivity are more likely to be responsible for the observed patterns.     

Meiofaunal colonisation on artificial substrates: a tool for biomonitoring the environmental quality on coastal marine systems

The use of artificial substrates for monitoring environmental quality and contaminant impact has been repeatedly suggested, but little information is yet available on the applicability and the sensitivity of this approach. One of the crucial points to be addressed for using artificial substrates, as tools mirroring actual benthic community state, is assessing whether, and how, they reflect in situ conditions characterising natural sediments. In this study we investigated short-term dynamics of meiofaunal colonisation on artificial substrates (bottle brushes) deployed in impacted and "pristine" (control) sites. Meiofaunal colonisation reached a threshold level after 4-6 days in both impacted and control sites but with significantly higher densities in artificial substrates deployed in the control site. Meiofaunal parameters in artificial substrates reflected those of meiofaunal assemblages inhabiting natural sediments where artificial substrates were deployed. Colonised artificial substrates were then transplanted from impacted to control sites. This caused a significant increase of meiofaunal abundance, which after 5 days reached values indistinguishable from the non-impacted control. Given the rapid colonisation time, meiofaunal sensitivity to changing environmental conditions, it can be concluded that artificial substrates can represent an useful tool to be further developed for routine and low-cost monitoring studies aiming at integrating biological indicators of environmental quality.     

Assessing benthic ecological impacts of bottom aquaculture using macrofaunal assemblages

Bottom aquaculture of bivalves is a high-yield culture method, which is increasingly adopted by shellfish farmers worldwide. However, the effects of bottom aquaculture on benthic ecosystems are not well-known. Manila clam (Ruditapes philippinarum), is a widely distributed bottom aquaculture mollusk species. To assess the ecological impacts of Manila clam bottom aquaculture, clams and other macrofaunal assemblages were investigated during four cruises (July and November 2011, February and May 2012) at six sampling sites in Jiaozhou Bay, China. Correlation analysis showed that macrofaunal assemblages had significant negative correlations with the abundance of Manila clams. However, according to the results of several biotic indices, a low disturbance was detected by Manila clam bottom aquaculture. In conclusion, AMBI (AZTI'S Marine Biotic Index) and M-AMBI (Multivariate AZTI Marine Biotic Index) indices are more suitable for assessing ecological quality than polychaete/amphipod ratios when the disturbance is slight, such as at a bivalve bottom aquaculture.