PCBs in the fish assemblage of a southern European estuary

The Mondego estuary fish assemblage was studied for the accumulation of PCBs. Three sampling stations were visited along an estuarine salinity gradient, and, in total, 15 species were collected. Analysis of PCBs revealed no significant differences among the sampling stations, although differences were observed among the fish assemblages. Fish assemblages could be divided into three groups. The first group comprised those with higher concentration (more than 10 ng g^− 1, dw), included the species Gobius niger, Sardina pilchardus, Anguilla anguilla, Pomatoschistus microps, Chelidonichthys lucerna and Liza ramada; the second group with medium concentration (5–10 ng g^− 1, dw), included the species Pomatoschistus minutus, Dicentrarchus labrax, Atherina presbyter, Chelon labrosus, Diplodus vulgaris, Platichthys flesus and Cilata mustela; and a third group with low concentration (less than 5 ng g^− 1, dw), included the species Solea solea and Callionymus lyra. A positive correlation was found between lipid content and PCB concentrations. To evaluate the influence of the residence time of species on the accumulation of PCBs, species were divided into two groups: species that spend more than 3 years in the estuary, and species that spend less than 3 years in the estuary. Species that spend more than 3 years in the estuary presented higher concentrations than species that spend less than 3 years in the estuary. CBs 138 and 153 had higher concentration, and tended to increase with time spent in the estuary.     

Recruitment of flatfish species to an estuarine nursery habitat (Lima estuary,NW Iberian Peninsula)

One of the present concerns of fish biologists involves defining and identifying nursery habitats in the context of conservation and resource management strategies. Fish nursery studies usually report upon nursery occupation during the latter juvenile stages, despite the fact that recruitment to nurseries can start early in life, during the larval phase. Here we investigated the use of a temperate estuarine nursery area, the Lima estuary (NW Portugal), by initial development stages of flatfish species before and after metamorphosis, integrating the larval and juvenile phases. The Lima estuarine flatfish community comprised twelve taxa, seven of which were present as pelagic larvae, six as juveniles and three as adults. There was a general trend of increasing spring–summer abundance of both larvae and juveniles, followed by a sharp winter decrease, mainly of larval flatfishes. The Lima estuary was used by Solea senegalensis, Platichthys flesus and Solea solea as a nursery area, with direct settlement for the two first species. In contrast, indirect settlement was suggested for S. solea, with metamorphosis occurring outside the estuarine area. Estuarine recruitment of S. senegalensis varied between years, with young larvae occurring in the estuary throughout a prolonged period that lasted 6–9 months, corroborating the protracted spawning season. P. flesus, the second most abundant species, exhibited a typical spring estuarine recruitment, without inter-annual variations. Developed larvae arrived in the estuary during spring, whereas the 0-group juveniles emerged in the following summer period. The present study contributes new insight to our understanding of the economically important S. senegalensis, and highlights the importance of integrating the planktonic larval phase into traditional flatfish nursery studies.     

Fish settlement in the ocean vs. estuary: Comparison of pelagic larval and settled juvenile composition and abundance from southern New Jersey,U.S.A.

To describe the larval and juvenile fish fauna and to evaluate the relative contribution of the ocean and the estuary as settlement areas for benthic species, we compared the composition and abundance of larval fish supply to that of recently settled juvenile fishes in both ocean and an adjacent estuary habitats in southern New Jersey. The study was conducted from May to November 1992 in the Great Bay–Little Egg Harbor estuary (<1–8 m sampling depth) and on the adjacent inner continental shelf in the vicinity of Beach Haven Ridge (8–16 m). During the study more larvae nearing settlement (postflexion) were captured in the estuary than in the ocean. Settlement occurred earlier in the estuary than in the ocean perhaps under the influence of earlier, seasonal warming of estuarine waters. There appeared to be two spatial patterns of settlement in the study area based on the dominant species (n = 17) represented by a sufficient number of individuals (n ≥ 25 individuals). There were species that primarily settle in the estuary, as represented by both estuarine residents (n = 3) and transients (n = 4), and those that settle in both the estuary and the ocean (n = 10). However, there were no species whose larvae were present in the estuary yet settle in the ocean. The fact that many of the species settle in both the estuary and the ocean indicates an overlap between these habitats because, at least for some species, these habitats may function in the same way. Further resolution of fish settlement patterns, and its influence on recruitment will need to rely on synoptic comparisons between estuaries and the ocean over multiple years.     

Spawning period of Senegal sole,Solea senegalensis,based on juvenile otolith microstructure

The Senegal sole, Solea senegalensis, is a flatfish species distributed from the Bay of Biscay to the coast of South Africa. Although it is a species of high commercial value its spawning period remains poorly known. In the Tagus estuary, Portugal, two juvenile cohorts of this species colonize two independent nursery areas within the estuarine system. Left lapilli otoliths of these 0-group juveniles were used to estimate age and back-calculate hatch dates, thus allowing the estimation of S. senegalensis spawning period in the Portuguese coast. The two cohorts of S. senegalensis completed the colonization of the two nurseries in July. The ages of juveniles were estimated to range between 46 and 111 days in nursery A, and between 33 and 61 days in nursery B. Hatch dates ranged from April to early June for juveniles colonizing nursery A, and from May to early June for juveniles colonizing nursery B. The mean hatch date in nursery A was the 7th of May, while in nursery B it was the 25th of May. It was concluded that the spawning period for this species off the Portuguese coast was from April to June.     

Influence of sex and age on PCBs accumulation in the commercial fish Chelon labrosus

Thicklip grey mullet, Chelon labrosus, is an important commercial fish species and has been studied worldwide. However, no recent studies have been made regarding polychlorinated biphenyls (PCBs) in wild C. labrosus. Due to that, the concentration of 13 PCBs congeners was measured in muscles and livers, of males and females, of C. labrosus of different ages, allowing the estimation of PCB bioaccumulation throughout the species lifespan, in the Mondego estuary, a southern European temperate estuary. Male muscle sample concentrations ranged from 32 to 96 ng g^− 1 (lipid wt.) and in females from 32 to 62 ng g^− 1 (lipid wt.). In male liver sample concentrations ranged from 106 to 158 ng g^− 1 (lipid wt.), while female concentrations ranged from 88 to 129 ng g^− 1 (lipid wt.). The most abundant congeners presenting higher percentages in all samples were CB 138, 153 and 180. No significant differences were found between the concentrations in both sexes, but muscle and liver PCB concentrations in males tended to increase with age whereas in females concentrations remained stable throughout the species lifespan. Significant differences were found between concentrations in muscle and liver.     

Diatom biomass and productivity in oceanic and plume-influenced waters of the western tropical Atlantic ocean

Whereas diatoms (class Bacillariophyceae) often dominate phytoplankton taxa in the Amazon estuary and shelf, their contribution to phytoplankton dynamics and impacts on regional biogeochemistry are poorly understood further offshore in the western tropical Atlantic Ocean (WTAO). Thus, relative contribution of diatoms to phytoplankton biomass and primary production rates and associated environmental conditions were quantified during three month-long cruises in January–February 2001, July–August 2001, and April–May 2003. The upper water column was sampled at 6 light depths (100%, 50%, 25%, 10%, 1% and 0.1% of surface irradiance) at 64 stations between 3° and 14°N latitude and 41° and 58°W longitude. Each station was categorized as ‘oceanic’ or ‘plumewater’, based on principal component analysis of eight physical, chemical and biological variables. All stations were within the North Brazil Current, and plumewater stations were characterized by shallower mixed layers with lower surface salinities and higher dissolved silicon (dSi) concentrations than oceanic stations. The major finding was a much greater role of diatoms in phytoplankton biomass and productivity at plumewater stations relative to oceanic stations. Mean depth-integrated bSi concentrations at the plumewater and oceanic stations were 14.2 and 3.7 mmol m⁻², respectively. Mean depth-integrated SiP rates at the plumewater and oceanic stations were 0.17 and 0.02 mmol m⁻² h⁻¹, respectively. Based on ratios of SiP and PP rates, and typical Si:C ratios, diatoms contributed on average 29% of primary productivity at plumewater stations and only 3% of primary productivity at oceanic stations. In contrast, phytoplankton biomass (as chlorophyll a concentrations) and primary production (PP) rates (as ¹⁴C uptake rates) integrated over the euphotic zone were not significantly different at plumewater and oceanic stations. Chlorophyll a concentrations ranged from 8.5 to 42.4 mg m⁻² and 4.0 to 38.0 mg m⁻² and PP rates ranged from 2.2 to 11.2 mmol m⁻² h⁻² and 1.8 to 10.8 mmol m⁻² h⁻² at plumewater and oceanic stations, respectively. A conservative estimate of annual integrated SiP in offshore waters of Amazon plume between April and August is 0.59 Tmol Si, based on mean SiP rates in plumewaters and satellite-derived estimates of the area of the Amazon plume. In conclusion, river plumewaters dramatically alter the silicon dynamics of the WTAO, forming extensive diatom-dominated phytoplankton blooms that may contribute significantly to the global Si budget as well as contributing to energy and matter flow off of the continental shelf.     

Inter-cohort differences in spatial and temporal settlement patterns of young-of-the-year windowpane (Scophthalmus aquosus) in southern New Jersey

The timing and location of settlement of two cohorts (spring and fall) of windowpane (Scophthalmus aquosus) were identified based on collections from 64 sampling locations along a corridor from the lower estuary, through the inlet, and on to the adjacent inner continental shelf in southern New Jersey. Spatio-temporal patterns of settlement during 1989–1998 were determined based on capture location and timing, and eye migration stage. Spring-spawned windowpanes were collected in estuarine, inlet and ocean habitats as larvae, during settlement, and after settlement. Densities of spring-spawned larvae (∼2–10 mm standard length (SL)) peaked in May in all habitats (estuary, inlet, and ocean). Initial settlement of spring-spawned windowpane occurred during May in the inlet and ocean when fish had grown to ∼7–8 mm SL (mid-point of eye migration), but fish did not appear in demersal estuarine collections until June when they were larger and more developmentally advanced (∼24–32 mm SL; post-eye migration). A transitional settlement period, comprised of a progressive habitat shift from pelagic to demersal habitats, is proposed for the spring cohort to explain the observed patterns. Fall-spawned fish of all developmental stages and sizes were virtually absent from estuarine collections. Fall-spawned larval (∼2–10 mm SL) densities peaked in October in inlet and ocean habitats and fish began settling there during the same month at sizes similar to the spring cohort (∼7–8 mm SL). This research confirms that there are important cohort-specific and life-stage dependent differences in young-of-the-year (YOY) windowpane habitat use in southern New Jersey and perhaps in other east coast US estuaries. These differences may affect the overall contribution that each cohort makes to a given year class and thus, may have an important role in determining the recruitment dynamics of this species.     

Downward transport of organic carbon by diel migratory micronekton in the western equatorial Pacific:: its quantitative and qualitative importance

Using simultaneous sampling with a commercial-sized trawl, a zooplankton net, and a sediment trap, we evaluated the contribution of vertically migrating micronekton to vertical material transport (biological pump) at two stations (3°00′N, 146°00′E and 3°30′N, 145°20′E) in the western equatorial North Pacific. The gravitational sinking particulate organic carbon flux out of the euphotic zone was 54.8 mg C m⁻² day⁻¹. The downward active carbon flux by diel migrant mesozooplankton was 23.53 and 9.97 mg C m⁻² day⁻¹, and by micronekton 4.40 and 2.26mg C m⁻² day⁻¹ at the two stations. Assuming that the micronekton sampling efficiency of the trawl was 14%, we corrected the downward carbon flux due to micronekton respiration to 29.9 and 15.2mg C m⁻² day⁻¹, or 54.6 and 27.7% of the sinking particle flux at the two stations. The corrected micronekton gut fluxes were 1.53 and 0.97mg C m⁻² day⁻¹. The role of myctophid fish fecal matter as a possible food resource for deep-sea organisms, based on its fatty acid and amino acid analysis, is discussed.     

Metazoan meiofauna within the oxygen-minimum zone off Chile: Results of the 2001-PUCK expedition

A quantitative study of metazoan meiofauna was carried out at continental shelf and slope stations affected by the oxygen-minimum zone in the eastern South Pacific off Chile. Densities of meiobenthos at the investigated stations off Antofagasta (22°S), Concepción (36°S), and Chiloé (42°S) ranged from 1282.1 to 8847.8 ind 10 cm⁻². Oxygen deficiency led only to average abundances, despite higher food availability and freshness at the corresponding sites. Sediment organic carbon, chlorophyll-a, and phaeopigment contents were used as measures of the input from water-column primary production, which accumulated at the oxygen-minimum zone stations. The highest abundances were found at a station with an oxygen content of 0.79 mL L⁻¹, which was slightly elevated from what is defined as oxygen minimum (0.5 mL L⁻¹). The most oxygenated site yielded the lowest densities. Meiofauna assemblages became more diverse with increasing bottom-water oxygenation, whereas nematodes were the most abundant taxon at every station, followed by annelids, copepods, and nauplii.     

Bioaccumulation and trophic transfer of mercury in striped bass (Morone saxatilis) and tautog (Tautoga onitis) from the Narragansett Bay (Rhode Island,USA)

We examined the bioaccumulation and trophic transfer of mercury in two marine finfish species, striped bass (Morone saxatilis) and tautog (Tautoga onitis), collected from the Narragansett Bay (Rhode Island, USA). For each of these target fish, white muscle tissue was analyzed for total mercury (Hg) and results were evaluated relative to fish age, body size, and Hg content of preferred prey. Dietary and stable isotope analysis was also used to elucidate the effect of trophic processes on Hg concentrations in fish. The Hg content of muscle tissue was positively correlated with fish age and length for both species, although striped bass accumulated Hg faster than tautog. Accelerated Hg bioaccumulation in striped bass is consistent with its high trophic level (trophic level = 4.07) and Hg-enriched prey (forage fish and macrocrustaceans; mean Hg content = 0.03 mg Hg kg wet wt^?1). In contrast, tautog maintain a lower trophic status (trophic level = 3.51) and consume prey with lower Hg levels (mussels and crabs; mean Hg content = 0.02 mg Hg kg wet wt^?1). Despite differences in Hg bioaccumulation between target fish, the mean Hg concentration of tautog exceeded levels in striped bass (0.24 and 0.16 mg Hg kg wet wt^?1, respectively) due to a disparity in age-at-catch between sampled groups (mean age of tautog and bass = 11.3 and 4.3 yr, respectively). Taking into account legal minimum catch lengths further revealed that 75.0% of legal-size striped bass (>70.2 cm TL; n = 4) and 44.8% of tautog (>40.6 cm TL; n = 29) had Hg levels beyond the US EPA regulatory threshold of 0.3 mg Hg kg wet wt^?1. Moreover, Hg-length relationships suggest that each target fish meets this threshold near their minimum legal catch length. Our findings reiterate the value of species ecology to improve predictions of fish Hg and permit better management of human contamination by this important dietary source.     

Stock and losses of trace metals from salt marsh plants

Pools of Zn, Cu, Cd and Co in the leaf, stem and root tissues of Sarcocornia fruticosa, Sarcocornia perennis, Halimione portulacoides and Spartina maritima were analysed for a Tagus estuary (Portugal) salt marsh. Pools of Cu and Cd in the salt marsh were higher in spring/summer, indicating a net uptake of these metals during the growing season. Standing stocks of Zn, Cu, Cd and Co in the leaf and stem biomass of S. fruticosa, S. perennis and H. portulacoides showed a strong seasonal variation, with higher values recorded in autumn. The metal-containing leaves and stems that shed in the autumn become metal-containing detritus. The amount of this material washed out from the total marsh area (200 ha) was estimated as 68 kg of Zn, 8.2 kg of Cu, 13 kg of Co and 0.35 kg of Cd. The high tidal amplitude, a branched system of channels and semi-diurnal tidal cycle greatly favour the export of the organic detritus to adjoining marsh areas.     

Temporal and spatial distributions of larval fish assemblages in the Lima estuary (Portugal)

The Lima estuary (NW Portugal) is at the end of an international watershed, whose potential role as a spawning and nursery habitat for local fish populations has not been previously examined. To address this knowledge gap, fortnightly plankton surveys were conducted between April 2002 and April 2004. A total of 12,903 larvae, belonging to 20 families and 50 taxa were collected, with a mean abundance of 8 individuals per 100 m³. Gobiidae was the most abundant family comprising 71% of the total catch, followed by Clupeidae with 12% of the total. The top six abundant taxa (Pomatoschistus spp., Sardina pilchardus, Ammodytes tobianus, unidentified Clupeidae, Symphodus melops and Solea senegalensis) represented 91% of the total catch. Fish larvae showed a seasonal trend with abundances increasing during spring and summer. Diversity was generally low (H′ = 0.65) with high dominance of very few taxa. Near the ocean, the larval fish assemblage was more diverse due to the presence of marine species. In the lower estuary Channel zone, abundance was lower than in the two upstream salt marsh zones (North and South zones) and no statistical differences in abundance or diversity values were found within the latter zones. ANOSIM results demonstrated seasonal differences in the species composition, mainly during the second winter period which was typified by a pelagic species A. tobianus. The community in the Channel zone was more diverse in comparison with the other zones, which were highly dominated by the most abundant species. The spatial and temporal trends of the most abundant species were typical for Iberian estuaries, with the exception of the low abundance of anchovy larvae and the unusually high numbers and frequency of S. pilchardus, usually mentioned as accidental in estuarine systems. Overall results suggest that the Lima estuary larval fish assemblage has a strong seasonality and affinity to the salt marsh zones. It seems that spawning seasonality controlled the presence of temporary estuarine residents, while environmental aspects controlled the general abundance trend of the resident species.     

Kinetic study reveals weak Fe-binding ligand,which affects the solubility of Fe in the Scheldt estuary

The chemistry of dissolved Fe(III) was studied in the Scheldt estuary (The Netherlands). Two discrete size fractions of the dissolved bulk (< 0.2 μm and < 1 kDa) were considered at three salinities (S = 26, 10 and 0.3).Within the upper estuary, where fresh river water meets seawater, the dissolved Fe concentration decreases steeply with increasing salinity, for the fraction < 0.2 μm from 536 nM at S = 0.3 to 104 nM at S = 10 and for the fraction < 1 kDa from 102 nM to 36 nM Fe. Further downstream, in the middle and lower estuary, this decrease in the Fe concentration continues, but is far less pronounced. For all samples, the traditionally recognised dissolved strong organic Fe-binding ligand concentrations are lower than the dissolved Fe concentrations.Characteristics of dissolved Fe-binding ligands were determined by observing kinetic interactions with adsorptive cathodic stripping voltammetry. From these kinetic experiments we concluded that apart from the well-known strong Fe-binding organic ligands (L, logK′ = 19–22) also weak Fe-binding ligands (P) existed with an α value (binding potential = K′ · [P]) varying between 10^11.1 and 10^11.9. The presence of this relatively weak ligand explained the high concentrations of labile Fe present in both size fractions in the estuary. This weak ligand can retard or prevent a direct precipitation after an extra input of Fe.The dissociation rate constants of the weak ligand varied between 0.5 × 10^− 4 and 4.3 × 10^− 4 s^− 1. The rate constants of the strong organic ligand varied between k_d = 1.5 × 10^− 3–17 × 10^− 2 s^− 1 and k_f = 2.2 × 10⁸–2.7 × 10⁹ M^− 1 s^− 1. The dissociation rate constant of freshly amorphous Fe-hydroxide was found to be between 4.3 × 10^− 4 and 3.7 × 10^− 3 s^− 1, more labile or equal to the values found by Rose and Waite [Rose, A.L., Waite, T.D., 2003a. Kinetics of hydrolysis and precipitation of ferric iron in seawater. Environ. Sci. Technol., 37, 3897–3903.] for freshly precipitated Fe in seawater.Kinetic rate constants of Fe with the ligand TAC (2-(2-Thiazolylazo)-p-cresol) were also determined. The formation rate constant of Fe(TAC)₂ varied between 0.1 × 10⁸ and 3.6 × 10⁸ M^− 1 s^− 1, the dissociation rate constant between 0.2 × 10^− 5 and 17 × 10^− 5 s^− 1 for both S = 26 and S = 10. The conditional stability constant of Fe(TAC)₂ (β_Fe(TAC)2′) varied between 22 and 23.4 for S = 10 and S = 26 more or less equal to that known from the literature (logβ_Fe(TAC)2′ = 22.4; [Croot, P.L., Johansson, M., 2000. Determination of iron speciation by cathodic stripping voltammetry in seawater using the competing ligand 2-(2-Thiazolylazo)-p-cresol (TAC). Electroanalysis, 12, 565–576.]). However, at S = 0.3 the logβ_Fe(TAC)2′ was 25.3, three orders of magnitude higher. Apparently the application of TAC to samples of low salinity can only be done when the correct β_Fe(TAC)2′ is known.     

Drift algae reduce foraging efficiency of juvenile flatfish

Although flatfish species utilise a wide range of habitats as adults, several species are confined to a very limited habitat as juveniles. Recruitment levels are dependent on the quality and quantity of these nursery areas and changes therein. In the Baltic Sea, these shallow environments are often subject to influxes of drifting macroalgae, which add structure to otherwise bare sandy substrate. Structure, such as vegetation, alters predator–prey interactions of a wide range of fauna and in an array of marine, freshwater, and terrestrial systems. The aim of our study was to assess the inhibition potential of drifting macroalgae on the foraging efficiency of juvenile flatfish (young of the year Scophthalmus maximus L., young of the year- and group 1 + Platichthys flesus L.) through a series of microcosm experiments. Our results show that foraging success is restricted by drift algae as predation efficiency of all predator species and size classes was negatively affected by the presence of macroalgae. Overall, there was a reduction in predation success by 80 ± 12% due to structural effects and/or the induced changes in water chemistry associated with the algae. Flatfish depend on shallow sandy areas as feeding and nursery grounds during their juvenile stage and frequently occurring macroalgal assemblages drastically change the features of the otherwise bare substrate, setting the stage for small-scale, localised processes potentially affecting population dynamics.     

Phytoplankton distributions in the Shackleton Fracture Zone/Elephant Island region of the Drake Passage in February–March 2004

The Drake Passage region near Elephant Island in the Southern Ocean displays patchy phytoplankton blooms. To test the hypothesis that natural Fe addition from localized sources promoted phytoplankton growth here, a grid of stations (59°S to 62°S, 59°W to 53°W, as well as four stations in the eastern Bransfield Strait) were occupied from 12 February–24 March 2004. Phytoplankton abundance was measured using shipboard flow cytometry (70 stations), with abundances conservatively converted to biomass, and compared with measurements of dissolved iron (dFe) at a subset of stations (30 stations). Based on T–S property plots, stations were divided into Antarctic Circumpolar Current (ACC), Water On Shelf (WOS), Bransfield Strait (BS), and Mixed water stations, the latter representing locations with T–S properties intermediate between ACC and WOS stations. The highest integrated phytoplankton biomass was found at Mixed water stations, however, the highest integrated abundance was found at WOS stations, demonstrating that abundance and biomass do not necessarily show the same patterns. The distributions of nano- and micro-phytoplankton (<20 and >20 μm diameter cells, respectively) were also examined, with nano- and micro-plankton contributing equally to the total biomass at WOS and BS stations, but micro-plankton representing ∼2/3 of the biomass at Mixed and ACC stations. Increased inventories of dFe did not always correspond to increases in phytoplankton biomass – rather stations with lower mean light levels in the mixed layer (<110 μEinsteins m⁻² s⁻¹) had lower biomass despite higher ambient dFe concentrations. However, where the mean light levels in the mixed layer were >110 μEinsteins m⁻² s⁻¹, total biomass shows a positive trend with dFe, as does micro-phytoplankton biomass, but neither regression is significant at the 95% level. In contrast, if just nano-phytoplankton biomass is considered as a function of dFe, there is a significant correlation (r²=0.62). These data suggest a dual mechanism for the patterns observed in biomass: an increasing reservoir of dFe allows increased phytoplankton biomass, but biomass can only accumulate where the light levels are relatively high, such that light is not limiting to growth.     

Autonomous Microbial Sampler (AMS), a device for the uncontaminated collection of multiple microbial samples from submarine hydrothermal vents and other aquatic environments

An Autonomous Microbial Sampler (AMS) is described that will obtain uncontaminated and exogenous DNA-free microbial samples from most marine, freshwater and hydrothermal ecosystems. Sampling with the AMS may be conducted using manned submersibles, remotely operated vehicles (ROVs), autonomous underwater vehicles (AUVs), or when tethered to a hydrowire during hydrocast operations on research vessels. The modular device consists of a titanium nozzle for sampling in potentially hot environments (>350 °C) and fluid-handling components for the collection of six independent filtered or unfiltered samples. An onboard microcomputer permits sampling to be controlled by the investigator, by external devices (e.g., AUV computer), or by internal programming. Temperature, volume pumped and other parameters are recorded during sampling. Complete protection of samples from microbial contamination was observed in tests simulating deployment of the AMS in coastal seawater, where the sampling nozzle was exposed to seawater containing 1×10⁶ cells ml⁻¹ of a red pigmented tracer organism, Serratia marinorubra. Field testing of the AMS at a hydrothermal vent field was successfully undertaken in 2000. Results of DNA destruction studies have revealed that exposure of samples of the Eukaryote Euglena and the bacterium S. marinorubra to 0.5 N sulfuric acid at 23 °C for 1 h was sufficient to remove polymerase chain reaction (PCR) amplifiable DNA. Studies assessing the suitability of hydrogen peroxide as a sterilizing and DNA-destroying agent showed that 20% or 30% hydrogen peroxide sterilized samples of Serratia in 1 h and destroyed the DNA of Serratia in 3 h, but not 1 or 2 h. DNA AWAY™ killed Serratia and destroyed the DNA of both Serratia and the vent microbe (GB-D) of the genus Pyrococcus in 1 h.     

Population dynamics and secondary production of the cockle Cerastoderma edule: A comparison between Merja Zerga (Moroccan Atlantic Coast) and Arcachon Bay (French Atlantic Coast)

Cockle (Cerastoderma edule) population dynamics were studied at the southern limit of the distribution of this marine bivalve in Merja Zerga, Morocco. Parameters such as growth, mortality, and production were compared with those of a population at Arcachon Bay (France) a site in the center of the cockle's range. At each sampling period between two and three cohorts were simultaneously observed at each site and the average total abundance was usually higher at Merja Zerga. Recruitment occurred at both sites in spring when temperature rose above 19 °C, independently of the month. In Merja Zerga, winter recruitment was also observed at one occasion, following high sediment disturbance. The first year (2005–06) at Merja Zerga, the mortality rate was close to nil for juveniles and was Z = 1.5 yr^? 1 for adults, providing a high production (64 g dry weight m^? 2 yr^? 1). At Arcachon during the same period, the juvenile mortality rate was Z = 10.9 yr^? 1, the adult mortality rate was 3.4 yr^? 1 and production was 26 gDW m^?2 yr^? 1. The second year (2006–07), mortality after recruitment was much higher (Z = 8.6 yr^? 1, for juveniles) and similar to what was observed at Arcachon (Z = 8.4 yr^? 1). Mortality rate of adults was higher at Merja Zerga (Z = 3.0 yr^? 1) than at Arcachon (Z = 1.5 yr^? 1). Production was lower at Arcachon than at Merja Zerga although growth performances were higher at Arcachon. The higher growth performance at Arcachon (Φ′ = 3.3) was mainly due to high asymptotic length (L_∞ = 38 mm) and was related to low intraspecific competition compared to Merja Zerga where cockle abundance was higher (Φ′ = 3.1, L_∞ = 31 mm). P/B was low in both sites and slightly higher at Arcachon (1.1–1.5 against 1.0–1.1 yr^? 1). At Arcachon, recruitment was correlated with temperature, a peak occurring when temperature rose above 19 °C (June–July). At Merja Zerga, recruitment was already 2–3 months earlier but was not significantly correlated to temperature.This study showed that population dynamics of cockles at the southern limit of this distribution fell in the range of what was observed elsewhere in the North-Eastern Atlantic coast. Most factors that were involved in population regulation (intraspecific competition, predation and sediment dynamics) were not strictly dependent on latitude. The direct role of temperature (latitude dependent factor) was not obvious. Variation in temperature could explain the recruitment delay between Arcachon and Merja Zerga and the low maximum shell length at Merja Zerga.     

Top-down control of spring surface phytoplankton blooms by microzooplankton in the Central Yellow Sea,China

Phytoplankton growth and microzooplankton grazing were studied during the 2007 spring bloom in Central Yellow Sea. The surveyed stations were divided to pre-bloom phase (Chl a concentration less than 2 μg L⁻¹), and bloom phase (Chl a concentration greater than 2 μg L⁻¹). Shipboard dilution incubation experiments were carried out at 19 stations to determine the phytoplankton specific growth rates and the specific grazing rates of microzooplankton on phytoplankton. Diatoms dominated in the phytoplankton community in surface waters at most stations. For microzooplankton, Myrionecta rubra and tintinnids were dominant, and heterotrophic dinoflagellate was also important in the community. Phytoplankton-specific growth rates, with an average of 0.60±0.19 d⁻¹, were higher at pre-bloom stations (average 0.62±0.17 d⁻¹), and lower at the bloom stations (average 0.59±0.21 d⁻¹), but the difference of growth rates between bloom and pre-bloom stations was not statistically significant (t test, p=0.77). The phytoplankton mortality rate by microzooplankton grazing averaged 0.41±0.23 d⁻¹ at pre-bloom stations, and 0.58±0.31 d⁻¹ during the blooms. In contrast to the growth rates, the statistic difference of grazing rates between bloom and pre-bloom stations was significant (after removal of outliers, t test, p=0.04), indicating the importance of the top-down control in the phytoplankton bloom processes. Average potential grazing efficiency on primary productivity was 66% at pre-bloom stations and 98% at bloom stations, respectively. Based on our results, the biomass maximum phase (bloom phase) was not the maximum growth rate phase. Both phytoplankton specific growth rate and net growth rate were higher in the pre-bloom phase than during the bloom phase. Microzooplankton grazing mortality rate was positively correlated with phytoplankton growth rate during both phases, but growth and grazing were highly coupled during the booming phase. There was no correlation between phytoplankton growth rate and cell size during the blooms, but they were positive correlated during the pre-bloom phase. Our results indicate that microzooplankton grazing is an important process controlling the growth of phytoplankton in spring bloom period in the Central Yellow Sea, particularly in the “blooming” phase.     

Export fluxes of particulate organic carbon in the Chukchi Sea: A comparative study using 234Th/238U disequilibria and drifting sediment traps

Large-volume sampling of ²³⁴Th and drifting sediment trap deployments were conducted as part of the 2004 Western Arctic Shelf–Basin Interactions (SBI) spring (May 15–June 23) and summer (July 17–August 26) process cruises in the Chukchi Sea. Measurements of ²³⁴Th and particulate organic carbon (POC) export fluxes were obtained at five stations during the spring cruise and four stations during the summer cruise along Barrow Canyon (BC) and along a parallel shelf-to-basin transect from East Hanna Shoal (EHS) to the Canada Basin. ²³⁴Th and POC fluxes obtained with in situ pumps and drifting sediment traps agreed to within a factor of 2 for 70% of the measurements. POC export fluxes measured with in situ pumps at 50 m along BC were similar in spring and summer (average = 14.0 ± 8.0 mmol C m^− 2 day^− 1 and 16.5 ± 6.5 mmol C m^− 2 day^− 1, respectively), but increased from spring to summer at the EHS transect (average = 1.9 ± 1.1 mmol C m^− 2 day^− 1 and 19.5 ± 3.3 mmol C m^− 2 day^− 1, respectively). POC fluxes measured with sediment traps at 50 m along BC were also similar in both seasons (31.3 ± 9.3 mmol C m^− 2 day^− 1 and 29.1 ± 14.2 mmol C m^− 2 day^− 1, respectively), but were approximately twice as high as POC fluxes measured with in situ pumps. Sediment trap POC fluxes measured along the EHS transect also increased from spring to summer (3.0 ± 1.9 mmol C m^− 2 day^− 1 and 13.0 ± 6.4 mmol C m^− 2 day^− 1, respectively), and these fluxes were similar to the POC fluxes obtained with in situ pumps. Discrepancies in POC export fluxes measured using in situ pumps and sediment traps may be reasonably explained by differences in the estimated POC/²³⁴Th ratios that arise from differences between the techniques, such as time-scale of measurement and size and composition of the collected particles. Despite this variability, in situ pump and sediment trap-derived POC fluxes were only significantly different at a highly productive station in BC during the spring.     

Picophytoplankton dynamics and production in the Arabian Sea during the 1995 Southwest Monsoon

Phytoplankton community structure is expected to shift to larger cells (e.g., diatoms) with monsoonal forcing in the Arabian Sea, but recent studies suggest that small primary producers remain active and important, even in areas strongly influenced by coastal upwelling. To better understand the role of smaller phytoplankton in such systems, we investigated growth and grazing rates of picophytoplankton populations and their contributions to phytoplankton community biomass and primary productivity during the 1995 Southwest Monsoon (August–September). Environmental conditions at six study stations varied broadly from open-ocean oligotrophic to coastal eutrophic, with mixed-layer nitrate and chlorophyll concentrations ranging from 0.01 to 11.5 μM NO₃ and 0.16 to 1.5 μg Chl a. Picophytoplankton comprised up to 92% of phytoplankton carbon at the oceanic stations, 35% in the diatom-dominated coastal zone, and 26% in a declining Phaeocystis bloom. Concurrent in situ dilution and ¹⁴C-uptake experiments gave comparable ranges of community growth rates (0.53–1.05 d⁻¹ and 0.44–1.17 d⁻¹, to the 1% light level), but uncertainties in C:Chl a confounded agreement at individual stations. Microzooplankton grazing utilized 81% of community phytoplankton growth at the oligotrophic stations and 54% at high-nutrient coastal stations. Prochlorococcus (PRO) was present at two oligotrophic stations, where its maximum growth approached 1.4 d⁻¹ (two doublings per day) and depth-integrated growth varied from 0.2 to 0.8 d⁻¹. Synechococcus (SYN) growth ranged from 0.5 to 1.1 d⁻¹ at offshore stations and 0.6 to 0.7 d⁻¹ at coastal sites. Except for the most oligotrophic stations, growth rates of picoeukaryotic algae (PEUK) exceeded PRO and SYN, reaching 1.3 d⁻¹ offshore and decreasing to 0.8 d⁻¹ at the most coastal station. Microzooplankton grazing impact averaged 90, 70, and 86% of growth for PRO, SYN, and PEUK, respectively. Picoplankton as a group accounted for 64% of estimated gross carbon production for all stations, and 50% at high-nutrient, upwelling stations. Prokaryotes (PRO and SYN) contributed disproportionately to production relative to biomass at the most oligotrophic station, while PEUK were more important at the coastal stations. Even during intense monsoonal forcing in the Arabian Sea, picoeukaryotic algae appear to account for a large portion of primary production in the coastal upwelling regions, supporting an active community of protistan grazers and a high rate of carbon cycling in these areas.