Exploring composition and behaviour of fish fauna by in situ observations in the Bari Canyon (Southern Adriatic Sea,Central Mediterranean)

Canyons play a fundamental role in enhancing the abundance and diversity of marine organisms through the transport of organic matter and food resources, the presence of complex physical habitats and the absence of trawl fishing. During four baited lander deployments carried out in the Bari Canyon (Southern Adriatic Sea, Central Mediterranean), at depths of 443–788 m, about 43 h of video records were taken, for a total of 619,200 video frames. A total of 12 benthopelagic fish species (five chondrichthyes and seven osteichthyes) were identified. The blackspot seabream (Pagellus bogaraveo) was the most often observed fish species. The depth of 787 m represents a new depth record for this fish in the Adriatic Sea. Groups of up to 40 individuals of P. bogaraveo were attracted to the bait and were shown in single frames. The individuals were observed both exploring the area and feeding actively on the bait. The European conger (Conger conger) was recorded at each deployment. Clear scavenger behaviour was also observed in this teleost fish and in the shark Etmopterus spinax. The shark species Centrophorus granulosus and Hexanchus griseus, which are considered ‘vulnerable’ on the published IUCN Mediterranean Regional Red List, were also recorded but, although attracted by the bait, they were never seen feeding on it. Other fish species, harvested on fishing grounds, such as Merluccius merluccius, Helicolenus dactylopterus and Polyprion americanus, were also recorded. This study represents the first in situ documentation, at very low impact, of the fish fauna in the Bari Canyon, providing new insights into its small scale distribution and behaviour, the first in situ direct observation of the variable feeding behaviour of P. bogaraveo and its gregarious habits, as well as indicating that this canyon could act as a refuge area for species that are vulnerable to fishing on the open slope.     

Environmental features of deep-sea habitats linked to the genetic population structure of a crustacean species in the Mediterranean Sea

The deep-sea habitat, from 200 to 2000 m depth, has long been thought as an ecosystem where biotic and abiotic factors vary very little and consequently species are not disturbed by processes and phenomena which could promote fast evolutionary mechanisms. Unfortunately, biological information relating to deep water is limited, especially regarding the population genetics of species inhabiting the Mediterranean Sea, and general patterns cannot be inferred. In this study we report data on the population genetic structure of Aristeus antennatus , a deep-sea decapod crustacean species which has been widely studied due to its important economic value. We surveyed and examined the variation in a 369-bp fragment of the mtDNA control region from individuals caught by Spanish and Italian trawlers in eight localities. High levels of mitochondrial control region haplotypic diversity (ranging from 0.884 to 0.989) were observed. AMOVA showed a high level of genetic variation, more within than between populations, and a low but significant Φ_ST value was recovered. Minimum spanning network did not separate any haplotype group and haplotype distribution does not mirror the geographic origin of the samples. The absence of population substructuring was also observed with a principal coordinates analysis, which uses an individual-by-individual comparison. These results revealed extensive gene flow among populations. Information on demographic history based on mismatch analysis revealed an unstable population, showing an alternate pattern of growth and decline. Our results indicated that in the western and central Mediterranean basins A. antennatus is a large panmictic population with a fluctuating abundance. The absence of deep-sea barriers and adult migration may prevent the structuring of the species into genetically differentiated populations.     

Natural variability of hepatic biomarkers in Mediterranean deep-sea organisms

Biomarker assays are widely used as proxies for contaminant-induced effects in aquatic organisms. However, in many cases, their intrinsic natural variability due to exogenous and endogenous factors makes the interpretation of biomarker data difficult. In the present study, we investigated the natural fluctuations of six hepatic biomarkers, namely ethoxyresorufin-O-deethylase (EROD) in fish and pentoxyresorufin-O-deethylase (PROD) in crustacea, catalase (CAT), carboxylesterase (CbE), glutathione-S-transferase (GST), total glutathione peroxidase (GPX) and glutathione reductase (GR) in two deep-sea fish species, namely Alepocephalus rostratus and Lepidion lepidion and the decapod crustacean Aristeus antennatus. The NW Mediterranean deep-sea environment is characterized by very stable temperature and salinity conditions, allowing the exclusion of these two factors as potential sources of interference with biomarker activities. Biomarker results exhibited a clear influence of reproductive processes on enzyme activities, in particular in A. rostratus, which presented a pronounced seasonal pattern linked to variations in the gonadosomatic index (GSI). In addition, other factors such as food availability may also have influenced the observed variability, in particular in specimens of L. lepidion, which did not exhibit variations in reproductive activity throughout the sampling period. Depth-related variability did not exhibit a clear trend and fluctuations across sampling depths were not attributable to any specific factor. Body size had also a significant influence on some biomarkers, although allometric scaling of certain enzyme activities appears to be species-specific. The present work has thus shown that despite the lack of fluctuations of abiotic parameters such as temperature and salinity, biomarker activities in deep-sea organisms still exhibit significant variability, mainly as a result of reproductive processes and food availability.     

Life history of the deep-sea cephalopod family Histioteuthidae in the western Mediterranean

The life cycle of the two species of the deep-sea family Histioteuthidae inhabiting the Mediterranean Sea (Histioteuthis reversa and Histioteuthis bonnellii) was studied from monthly samples taken throughout the year during daytime hours by bottom trawl gears. A small sample of individuals found floating dead on the sea surface was also analyzed. Both species were caught exclusively on the upper slope at depths greater than 300 m. Their frequency of occurrence increased with depth and showed two different peaks, at 500–600 m and 600–700 m depth in H. bonnellii and H. reversa, respectively, which might indicate spatial segregation. Maturity stages were assigned using macroscopic determination and confirmed with histological analyses. Although mature males were caught all year round, no mature females were found, which suggests that their sexual maturation in the western Mediterranean takes place deeper than the maximum depth sampled (800 m). In fact, the increase in mean squid size with increasing depth in H. reversa indicates an ontogenetic migration to deeper waters. The individuals of both species found floating dead on the sea surface were spent females which had a relatively large cluster of small atresic eggs and a small number of remaining mature eggs scattered in the ovary and mantle cavity. The sizes of these females were clearly larger than the largest individuals caught with bottom trawls. A total of 12 and 7 different types of prey, belonging to three major taxonomic groups (crustaceans, osteichthyes and cephalopods), were identified in the stomach contents of H. reversa and H. bonnellii, respectively. In both species fishes were by far the main prey followed by crustaceans, whereas cephalopods were found only occasionally. The preys identified, mainly myctophids and natantian crustaceans, indicate that both histioteuthids base their diet on pelagic nictemeral migrators.     

Metabolism and chemical composition of marine pelagic amphipods: synthesis toward a global bathymetric model

Respiration and ammonia excretion data and chemical composition data [water content, ash, carbon (C), nitrogen (N) and C:N ratios] of 18–32 amphipods (hyperiids and gammarids) from the epipelagic through bathypelagic zones of the world’s oceans were compiled. The independent variables including body mass, habitat temperature and mid-sampling depth were all significant predictors of respiration, accounting for 65–83 % of the variance in the data, while the former two variables were significant predictors of ammonia excretion, accounting for 64–77 % of the variance. Atomic O:N ratios (respiration:ammonia excretion) ranged from 11 to 74 (median 21.5). C composition was negatively correlated with habitat temperature, but water contents, ash, N, and the C:N ratio were uncorrelated with the three independent variables. As judged by C:N ratios, protein was considered to be the major organic component of most pelagic amphipods. However, some amphipods from >500 m depth exhibited high C:N ratios (>10) suggesting a large deposition of lipids in the body. Comparison of the present results with global bathymetric models of euphausiids and pelagic copepods revealed that respiration rates of the pelagic amphipods were near-equal to the rates of euphausiids but greater than the rates of pelagic copepods, reflecting taxon-specific body morphology and swimming behavior among the three taxa. As a marked feature of body chemical composition, the pelagic amphipods exhibited extremely high ash content (mean 25 % of DM) due to their possession of a robust exoskeleton.     

The deep-sea macrobenthos on the continental slope of the northwestern Mediterranean Sea: a quantitative approach

As part of the ECOMARGE operation (J.G.O.F.S. France), macrobenthic assemblages in the Toulon Canyon were described and quantified on the basis of sampling carried out between 250 and 2000 m depth on the Mediterranean continental slope. Results show that Mediterranean bathyal assemblages are made up mainly of continental shelf eurybathic species. The qualitative and quantitative composition of populations varies with depth on the slope and also varies with station position at equivalent depth, whether on the flanks or in the canyon channel. Various analyses have provided evidence on the factors responsible for this population distribution pattern. No single factor emerges as predominant, but rather a group of factors, which are related to the nature and origin of sediments and more particularly their grain size distribution, geochemical composition and mode of transportation and sedimentation (benthic nepheloid or originating from the water column), act in conjunction to determine the pattern. Comparison with ocean continental slopes shows that in the Mediterranean Sea the absence of tidal current modifies the trophic structure of the macrobenthic assemblages, which are characterized by a dominance of surface and subsurface deposit feeders as compared to a dominance of suspension feeders and carnivores in the upper and median part of the slope in the ocean. Surface dumping of dredge spoil at the canyon head and channelling of waste induces an increase of organic matter and pollutant concentrations in sediment from the upper part of the canyon channel but does not give rise to any marked population degradation.     

Morphology and downslope sediment displacement in a deep-sea valley,the Valencia Valley (Northwestern Mediterranean)

The Valencia Valley is a Quaternary, 200 km long deep-sea valley in the Valencia Trough, Western Mediterranean Sea. A swathmapping survey approximately mid-way along the valley length, where the floor has an average gradient of 1:250 (0.2°), shows valley walls that rise 200 to 350 m above the valley floor, with slopes of 2 to 18°. Sediment forming the walls is undergoing retrogressive, upslope-directed slumping with increasing bedding disruption along steeper walls. The valley exhibits a winding course with steep outer and gentler inner walls around bends, and bedforms on the valley floor. Lateral migration around bends is less than 5 km and the valley is deeply entrenched into Quaternary-bedded sediments.     

Benthic mucilaginous aggregates in the Mediterranean Sea: Origin, chemical composition and polysaccharide characterization

Benthic mucilaginous aggregates are frequently formed in various parts of the Mediterranean basin, as in the Tyrrhenian and Adriatic Seas. Notwithstanding their wide spatial distribution, the role played by these aggregates in the biogeochemical cycling of organic matter is still largely unknown.The characteristics of the benthic aggregates examined in the present study showed that they are different from other mucilaginous aggregates, such as the “pelagic” ones that can form in the same areas in the water column and subsequently sediment to the seafloor. The aggregates are usually formed of structures of the filamentous macroalgae Acinetospora crinita, Chrysonephos lewisii and Nematochrysopsis marina. The elemental composition of the aggregates showed a marine macrophyte origin on the basis of the bulk organic matter content of the aggregates. Carbohydrates and proteins account for 26.6 to 55.9% of the organic carbon in the mucilage, respectively. Monosaccharide composition of exopolysaccharides in the mucilage aggregates revealed a characteristic pattern, with galactose, xylose or mannose and fucose as the major components. The relatively high content of deoxysugars is another distinctive feature. The abundant sulphate and uronic groups present in the polysaccharides in addition to their macromolecular dimensions and elongation contribute to inter-chain aggregation. Electron microscopic observations suggest that the polysaccharide fraction is the main macromolecular component in the formation of the persistent gel network in the aggregates.     

Novel active kinetoplastids associated with hypersaline anoxic basins in the Eastern Mediterranean deep-sea

The combination of nearly saturated salt concentration and corresponding high density, high hydrostatic pressure, absence of light, anoxia, and a sharp chemocline make the deep hypersaline anoxic basins in the Eastern Mediterranean Sea some of the most polyextreme habitats on Earth. Using kinetoplastid-specific primers, we detected kinetoplastid flagellates in some of the harshest deep-sea environments known to date, including some whose small subunit ribosomal RNA gene sequences are not closely related to cultured representatives. Kinetoplastids, including presumably novel representatives appear to be specialists of halocline environments in the Eastern Mediterranean, and to comprise a significant fraction of the protist communities in the brines and haloclines of several basins. Fluorescent in situ hybridization data indicate a novel ‘unidentified’ sequence clade of kinetoplastids related to bodonids represents as much as 10% of the total protist community in the Discovery Basin halocline. Different kinetoplastid groups are unevenly represented in the different basins and habitats we sampled, which we discuss as a result of environmental selection.     

The benthopelagic fish fauna on the summit of Seine Seamount,NE Atlantic: Composition,population structure and diets

Benthopelagic fishes were sampled during three cruises to Seine Seamount, NE Atlantic, using bottom trawls and an epibenthic sledge. A total of 16 fish species were caught on the summit plateau of the seamount at 160–180 m depth, belonging to 15 different families. Four species were common to all types of trawls, whereas the other species were found only in part of the catches. Most fish caught were small species and typical for shelf and seamount communities. The most abundant fish was the snipefish, Macroramphosus spp., which was important also in terms of biomass. The population structure (size classes and length/weight relationships) of the five most abundant species (Macroramphosus spp., Capros aper, Anthias anthias, Callanthias ruber and Centracanthus cirrus) shows that usually two or three size classes, probably representing age groups (year classes), were present, and that growth rates were high. A stomach content analysis of these fishes revealed a predominance of pelagic prey, mainly small copepods. No indications for a seamount effect in terms of enhanced biomass or topographic blockage were found.     

Physiography and deposition on a distal deep-sea system: The Valencia Fan (Northwestern Mediterranean)

The Valencia Fan developed as the distal fill of a deep-sea valley, detached from the continental slope and the main sedimentary source. A survey of side-scan sonar, Sea Beam and reflection seismics shows that the sediment is largely fed through the Valencia Valley. The upper fan comprises large channels with low-relief levees, and the middle fan has sinuous distributary channels. Depositional bedforms predominate on the valley floor and levees, and erosional bedforms are common in the valley walls. A change to slope on the fan apex and the presence of volcanoes on the upper fan are the main factors influencing fan-growth pattern.     

Geographical variation in metazoan parasites of the deep-sea fish Bathypterois mediterraneus Bauchot, 1962 (Osteichthyes: Ipnopidae) from the Western Mediterranean

This study examines the parasite fauna of Bathypterois mediterraneus, the most common fish below 1500 m in Western Mediterranean waters. Samples were obtained during July 2010 from the continental slope of two different areas (off Catalonia and Balearic Islands) in three different bathymetric strata at depths between 1000 and 2200 m. The parasite fauna of B. mediterraneus included a narrow range of species: Steringophorus cf. dorsolineatum, Scolex pleuronectis, Hysterothylacium aduncum, Anisakis sp. larva 3 type II and Sarcotretes sp. Steringophorus cf. dorsolineatum and H. aduncum were the most predominant parasites. H. aduncum showed significant differences in abundance between depths of 2000–2200 m with 1000–1400 m and 1400–2000 m, irrespective of locality, whereas S. cf. dorsolineatum showed significant differences between the two localities at all depths except for 2000–2200 m. We suggest the possible usefulness of these two parasites as geographical indicators for discriminating discrete stocks of B. mediterraneus in Western Mediterranean waters.     

Gouge marks on deep-sea mud volcanoes in the eastern Mediterranean: Caused by Cuvier's beaked whales?

Enigmatic seafloor gouge marks at depths of 1700–2100 m have been observed from submersible during geological survey work studying mud volcanoes in the eastern Mediterranean Sea. The marks consist of a central groove (about 10 cm deep and 1–2 m long), superimposed on a broader bowl-shaped depression (1–2 m long by about 50 cm wide) with raised rims (up to 10 cm high) to either side of the central groove. We discuss the potential biological causes of these marks, and conclude that they are probably created by Cuvier's beaked whales (Ziphius cavirostris) during foraging dives to these depths. The mud volcanoes have a comparatively rich and diverse benthic ecology associated with methane-rich fluid seeps and thus could be the base of food chains that reach top predators like the deep-diving whales. The characteristic high acoustic backscatter of the mud volcanoes would facilitate their detection by the echolocation system of these whales.     

深海热液环境中脂肪酸组成的研究进展

1977年科学家们在东太平洋拉帕戈斯裂谷发现了深海热液喷口,揭示了以化能合成为基础的一个新的生命世界。围绕喷口的热液环境不同于一般深海环境,具有异常的化学特征:高温、高压且硫化物含量丰富,因此,接近热液的生物,     

Spatial variability in the trophic ecology and biology of the deep-sea shrimp Aristaeomorpha foliacea in the Mediterranean Sea

The trophic ecology, energy and reproductive states of the deep-water shrimp Aristaeomorpha foliacea, widely distributed along the slopes of the Mediterranean Sea Basins, were analysed in eight areas spread along ca. 3000 km in order to identify patterns in the habitat conditions supporting the species. From W to E the areas were situated between the north side of Eivissa (39°12′N, 1°20′E, in the Balearic Basin) and off Mersin, Turkey (36°15′N, 34°19′E, in the Levantine Sea). Trends identified mainly as a function of longitude from west to east were: (i) higher δ¹⁵N, parallel to δ¹⁵N shifts in the top 200 m of the water column for particulate organic N (Pantoja et al., 2002). The δ¹⁵N trend indicates that the deep trophic web, i.e. A. foliacea at 400–600 m, reflects the δ¹⁵N signal of the photic zone; (ii) a similar significant trend of δ¹³C, related with exploitation of pelagic versus benthic resources by A. foliacea in each area (i.e. by local variability of terrigenous inputs via submarine canyons). More depleted δ¹³C was found at mid-longitudes (Tyrrhenian Sea and Sicily Channel) linked to higher consumption of macroplankton prey (Pasiphaea spp., euphausiids and mesopelagic fishes). The feeding intensity (gut fullness, F) and prey diversity (J) of A. foliacea were related, according to generalized linear models, with the temperature and salinity of intermediate waters, variables in turn associated with latitude and longitude. Both F and J were higher in areas with greater shrimp density. The optimal ecological habitat of A. foliacea appears to be located in the Tyrrhenian Sea and the Sicily Channel, where we found the highest F, the greatest trophic diversity and A. foliacea in the best biological condition (i.e. with higher hepato-somatic index, HSI). These are also the areas with the highest densities of A. foliacea. In contrast, in the western Mediterranean Sea (Balearic Basin and the southern Balearic Islands), where A. foliacea has low densities, the shrimp showed generally lower values of trophic indicators and biological condition.     

Patterns of bathymetric distribution among deep-sea fauna at local spatial scale: comparison of mainland vs. insular areas

We have compared the distribution of mesopelagic, benthopelagic and benthic fauna between two areas: one on the continental side of the Catalan Sea (cCS: northwestern Mediterranean) and one to the SW of the Balearic Islands (SWB: southwestern Mediterranean) at depths between 147 and 2266 m. Based on 88 bathyal fish and crustaceans (Decapoda and Peracarida) dominant in these communities, we compared the maximum depth of occurrence (MDO) of (upper) middle-slope species and the minimum depth of occurrence (mDO) of lower-slope dwelling species. Mid-slope fish, decapods, peracarids and, within the latter, amphipods and cumaceans had a deeper MDO in the cCS than in the SWB. Depth differences between MDO of species were significant for all taxa, except isopods. In the same way, lower slope fish and decapods had a shallower mDO in the SWB than in the cCS. Within peracarids, the dominant taxon (amphipods) also followed this trend. Depth differences in mDO of species between the areas were significant for decapods and for amphipods (not for fish, nor all peracarids nor cumaceans). In summary, most taxa showed a deeper depth distribution of middle-slope species in the cCS, and a shallower depth distribution of lower-slope dwelling species in the SWB. This suggests that the whole community, from small detritus-feeders (peracarids) to top predators (fish) have a similar response to a common signal. Much basic information on the biology and possible environmental factors affecting deep-sea species distribution is not available, so causes of the trends demonstrated here cannot be fully evaluated. In spite of these obvious limitations, we have shown that (1) mesopelagic decapods (e.g., Gennadas elegans and Sergia robusta), with a higher dependence upon primary sources of food close to the surface primary production, showed greater differences in their mDO between the areas than benthopelagic (e.g., Acanthephyra eximia, Nematocarcinus exilis) and benthic (e.g., Stereomastis sculpta, Munida tenuimana, Geryon longipes) species, and (2) fish at lower trophic levels, deduced from fractional trophic levels, showed higher differences in the MDO than fish at higher trophic levels. Trophic position of species in food webs seems the most important factor affecting the distributional differences between contrasting areas.     

Pressure-induced alteration in fatty acid composition of barotolerant deep-sea bacterium

Barotolerant bacterium was isolated from sediment sample which was obtained from the depth of 4033 m in the Izu-Ogasawara Trench. The physiological property, growth characteristics and fatty acid composition were examined. The strain was a psychrotrophic and barotolerant bacterium, and was identified as species in the genusAlteromonas. The fatty acids of the strain were from C12 to C18. As the growth pressure increased, the portion of unsaturated fatty acid in membrane fraction increased due to an increase in the portion of C171 and C181, while the relative portion of C160 and C161 decreased. On the other hand, as the growth temperature decreased, the portion of unsaturated fatty acid increased due to the increase in the portion of C161 and C181.     

Geochemistry of eastern Mediterranean sediments: Primary sediment composition and diagenetic alterations

Two cores recovered in the eastern Mediterranean were analysed for major, minor and trace elements. The primary chemical composition of the sediment is different at each location, probably because the lithological sources and the relative biogenic contributions differ.

Carbonates are important for the concentration of Ca, Mg and Sr, whereas aluminosilicates determine the concentration of Si, Al, K, Li, Y and Be, and to a lesser extent that of Fe, Cr, Ti, Mg, Zn and Zr. In sapropels, organic carbon and sulphur seem to be closely related. Bromine, Mo, P, Fe, V, Cu, Zn, Co, Ni and Cr are closely associated with organic and sulphidic compounds. The concentration versus depth profile for organic carbon in two sapropels points to a rapid establishment of conditions that gave rise to sapropel formation, followed by a gradual transition back to “normal” conditions.

The primary composition is overprinted by diagenetic processes. Sulphate-reducing conditions occurred during and just after sapropel deposition. A progressive oxidation front mechanism, which became active after sapropel deposition, is responsible for additional major geochemical changes. This diagenetic phenomenon has strong implications for the chemistry of Fe, Mn, Ni, Co, Zn, Cu, Cr, V, U, As and Sb.