Estimation of Scalar Source/Sink Distributions in Plant Canopies Using Lagrangian Dispersion Analysis: Corrections for Atmospheric Stability and Comparison with a Multilayer Canopy Model

Source/sink distributions of heat, water vapour andCO₂ within a rice canopy were inferred using aninverse Lagrangian dispersion analysis and measuredmean profiles of temperature, specific humidity andCO₂ mixing ratio. Monin–Obukhov similarity theorywas used to account for the effects of atmosphericstability on _w(z), the standard deviation ofvertical velocity and _L(z), the Lagrangian timescale of the turbulence. Classical surface layer scaling was applied in the inertial sublayer (z > z_ruf)using the similarity parameter = (z - d)/L, where z is height above ground, d is the zero plane displacementheight for momentum, L is the Obukhov length,and z_ruf 2.3h_c, where h_c iscanopy height. A single length scale h_c, was usedfor the stability parameter 3 = h_c/L in the height range 0.25 < z/h_c < 2.5. This choice is justified by mixing layer theory, which shows that within the roughness sublayer there is one dominant turbulence length scaledetermined by the degree of inflection in the windprofile at the canopy top. In the absence of theoretical or experimental evidence for guidance,standard Monin–Obukhov similarity functions, with = h_c/L, were used to calculate the stabilitydependence of _w(z) and _L(z) in the roughness sublayer. For z/h_c < 0.25 the turbulence length and time scales are influenced by the presence of the lowersurface, and stability effects are minimal. With theseassumptions there was excellent agreement between eddycovariance flux measurements and deductions from theinverse Lagrangian analysis. Stability correctionswere particularly necessary for night time fluxes whenthe atmosphere was stably stratified.The inverse Lagrangian analysis provides a useful toolfor testing and refining multilayer canopy models usedto predict radiation absorption, energy partitioningand CO₂ exchanges within the canopy and at thesoil surface. Comparison of model predictions withsource strengths deduced from the inverse analysisgave good results. Observed discrepancies may be dueto incorrect specification of the turbulent timescales and vertical velocity fluctuations close to theground. Further investigation of turbulencecharacteristics within plant canopies is required toresolve these issues.