首页 | 本学科首页   官方微博 | 高级检索  
     


Methods for extraction of microorganism DNAfrom glacier surface snow
Authors:PeiYing Yan  ShuGui Hou  Tuo Chen  ShuHong Zhang  WeiJun Sun
Affiliation:State Key Laboratory of Cryospheric Sciences, Cold and Arid Regions Environmental and Engineering Research Institute,Chinese Academy of Sciences, Lanzhou, Gansu 730000, China;1. State Key Laboratory of Cryospheric Sciences, Cold and Arid Regions Environmental and Engineering Research Institute,Chinese Academy of Sciences, Lanzhou, Gansu 730000, China2. School of Geographic and Oceanographic Sciences, Nanjing University, Nanjing, Jiangsu 210093, China;State Key Laboratory of Cryospheric Sciences, Cold and Arid Regions Environmental and Engineering Research Institute,Chinese Academy of Sciences, Lanzhou, Gansu 730000, China;Shangqiu Normal University, Department of Life Science, Shangqiu, Henan 476000, China;State Key Laboratory of Cryospheric Sciences, Cold and Arid Regions Environmental and Engineering Research Institute,Chinese Academy of Sciences, Lanzhou, Gansu 730000, China
Abstract:In order to thoroughly investigate the diversity of glacier microorganisms, four DNA extraction methods with different lysis patternswere tested and two screened methods (the Bosshard-Bano method and the Zhou method) were optimized for the most effectiveform of the filter membrane (cut vs. uncut), the DNA extraction method, and the precipitation method. The two optimizedmethods were then compared with the commercial Mo-Bio DNA extraction kit, and the results showed that the kit was generallysuitable for extraction of microorganism DNA from glacier surface snow. Procedurally, it was found that a modified Bosshard-Bano method (i.e., cutting the filter membrane into pieces, using a specific lysis pattern [lysozyme (5 mg/mL)-protease K(1 mg/mL)-CTAB (1%)-SDS (1%)], performing the extraction only once by chloroform-isoamyl alcohol (24:1), and conductingDNA precipitation by pure ethanol) was also an effective and less expensive method for extraction of microorganism DNA fromglacier surface snow.
Keywords:glacier surface snow   extraction of microorganism DNA   optimizing method
点击此处可从《寒旱区科学》浏览原始摘要信息
点击此处可从《寒旱区科学》下载全文
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号