Cyclone and bioturbation effects on sediments from coral reef lagoons

Despite the severity of tropical cyclone ‘Winifred’, which crossed the Great Barrier Reef on 1 February 1986, there were little long-term effects on lagoon surface sediments from reefs in its path. Short-term effects were apparent only at one particularly exposed area. These were: an increase in proportion of the coarse fraction, the establishment of sand ripples, and the destruction of the mounds produced by callianassid shrimps (normally the dominant topographic feature). Within six weeks this area was indistinguishable from a typical reef lagoon. This is probably the result of sediment reworking by callianassid shrimp, involving selective burial of the coarse fragments and transport to the surface of finer particles. Sediment turnover rates by callianassids are commensurate with change to the sediment within the relatively short period observed. The sediment fauna responded quickly to the changes in sediment type. Immediately after the cyclone the disturbed area supported a fauna typical of the coarse sediments on the shallow reef flat, as the sediment reverted to a more normal type so the fauna changed back to that typical of a reef lagoon.     

Malthusian overfishing in Pulau Banggi?

We assess, based on fisheries and interview data collected on-site, whether Malthusian overfishing is occurring in Pulau Banggi, Sabah. Fisheries resources in Pulau Banggi have been perceived to be declining over the past 20 years, and characteristics of Malthusian overfishing are evident, although not at a magnitude comparable with other more heavily exploited artisanal fisheries in the Philippines. It appears that Pulau Banggi's reef fisheries are at an early stage of Malthusian overfishing, and this is therefore a critical time for addressing and mitigating drivers of overfishing to prevent inevitable and further decline of Pulau Banggi's reef fisheries.     

Tidally incised valleys on tropical carbonate shelves: An example from the northern Great Barrier Reef, Australia

The formation of incised valleys on continental shelves is generally attributed to fluvial erosion under low sea level conditions. However, there are exceptions. A multibeam sonar survey at the northern end of Australia's Great Barrier Reef, adjacent to the southern edge of the Gulf of Papua, mapped a shelf valley system up to 220 m deep that extends for more than 90 km across the continental shelf. This is the deepest shelf valley yet found in the Great Barrier Reef and is well below the maximum depth of fluvial incision that could have occurred under a − 120 m, eustatic sea level low-stand, as what occurred on this margin during the last ice age. These valleys appear to have formed by a combination of reef growth and tidal current scour, probably in relation to a sea level at around 30–50 m below its present position.

Tidally incised depressions in the valley floor exhibit closed bathymetric contours at both ends. Valley floor sediments are mainly calcareous muddy, gravelly sand on the middle shelf, giving way to well-sorted, gravely sand containing a large relict fraction on the outer shelf. The valley extends between broad platform reefs and framework coral growth, which accumulated through the late Quaternary, coincides with tidal current scour to produce steep-sided (locally vertical) valley walls. The deepest segments of the valley were probably the sites of lakes during the last ice age, when Torres Strait formed an emergent land-bridge between Australia and Papua New Guinea. Numerical modeling predicts that the strongest tidal currents occur over the deepest, outer-shelf segment of the valley when sea level is about 40–50 m below its present position. These results are consistent with a Pleistocene age and relict origin of the valley.

Based on these observations, we propose a new conceptual model for the formation of tidally incised shelf valleys. Tidal erosion on meso- to macro-tidal, rimmed carbonate shelves is enhanced during sea level rise and fall when a tidal, hydraulic pressure gradient is established between the shelf-lagoon and the adjacent ocean basin. Tidal flows attain a maximum, and channel incision is greatest, when a large hydraulic pressure gradient coincides with small channel cross sections. Our tidal-incision model may explain the observation of other workers, that sediment is exported from the Great Barrier Reef shelf to the adjacent ocean basins during intermediate (rather than last glacial maximum) low-stand, sea level positions. The model may apply to other rimmed shelves, both modern and ancient.     

Shape and distribution analysis of Merensky Reef potholing, Northam Platinum Mine, western Bushveld Complex: implications for pothole formation and growth

Syn-magmatic removal of the cumulate pile during the formation of the Bushveld Complex resulted in “potholes”. Erosion progressed downward in the cumulate pile, resulting in a series of steep, transgressive contacts between locally conformable potholed reefs in the regional pothole sub-facies of the Swartklip Facies in the western limb of the Bushveld Complex. The deepest of these potholes, “third-order” or “FWP2” potholing, occurs where the base of the Merensky Cyclic Unit transgresses the Upper Pseudo-Reef Chromitite marker horizon. The base of a FWP2 pothole on Northam Platinum Mine consists of an unconformable stringer Merensky Chromitite overlain by a medium-grained, poikilitic orthopyroxenite and underlain by either a pegmatitic harzburgite or the medium-grained Lower Pseudo-Reef Anorthosite. Detailed shape and distribution analysis of FWP2 potholes reveals underlying patterns in their shape and distribution which, in turn, suggest a structural control. The ratio between pothole short vs long axes is 0.624 (N=1,385), although the ratio increases from 0.48 to 0.61 in the long axis range 10 to 60 m, then decreases from 0.61 to 0.57 from 61 to 100 m, increasing again from 0.57 to 0.61 from 101 to 400 m, suggesting that there is not a simple relationship between pothole shape and size. Shape (circularity, eccentricity, and dendricity) analysis of a subset of 638 potholes indicates that potholes with long axes <100 m have an elliptical, average normalized shape, elongate on a 120–150° orientation. Potholes with long axis lengths >100 m have an average normalized shape that is bilobate and elongate on a 120° orientation. The average aspect ratio (short axis length divided by long axis length) of potholes is highest for potholes with long axis lengths >100 m and lowest for potholes with long axis lengths between 35 and 60 m. The most common long axis orientation for potholes with long axis lengths <100 m is 150° but 120° for long axis lengths >100 m. Fractal analysis indicates that the distribution of pothole centers is controlled neither by a single nor several interacting fractal dimensions. Autocorrelation (Fry) analysis of the distribution of pothole centers shows recurring pothole distribution trends at 038, 070, and 110° for potholes over the full range of long axis lengths, while the trends of 008 and 152° occur in potholes with long axes lengths between 60 and 100 m. Chi-squared (X ²) analysis of the locations of pothole centers suggests that the distribution of small potholes is highly non-uniform but becomes exponentially more uniform with increasing pothole size. The model which best fits the observed shape and distribution analysis is a combination of protracted independent growth and “nearest neighbor” merging along specific orientations. For instance, the clustered distribution of original pothole centers resulted in merged potholes with long axes lengths of up to 60 m, exhibiting short vs long axes ratios of 0.61, preferred orientations of 150°, and alignment along 010 and 150° trends. Further independent growth allowed for merging of similar-sized (and smaller) neighboring potholes, generating potholes with long axes of up to 100 m in length, a preferred long axis orientation of 150°, and alignment along 010, 040, 075, and 150°. Subsequent preferential merging occurred along a 120° trend, thereby preserving a bilobate form. This implies that while pothole initiation and enlargement may be driven by a “top-down” (i.e., possibly thermomechanical) process, an underlying linear or structural catalyst/control is revealed in changes in pothole shape during enlargement and, furthermore, in the preferred trends along which potholes merged over a considerable period, possibly concomitant with adjustment of major structures in the footwall to the Bushveld Complex and pulses into the magma chamber.     

Possible refugia for reefs in times of environmental stress

This paper investigates the refuge potential of (1) upwelling areas, (2) coral areas at medium depth, and (3) offshore bank and island reefs in a scenario of increased global warming, and thus increased sea surface temperature (SST) and increased solar UV radiation. (1) Observations on coral health and water temperature in the subtropical Atlantic (Eleuthera and Cat Island, Bahamas) and Indian Ocean (Sodwana Bay, South Africa) suggest a link between cool water delivered by upwelling and coral health. After the 1998 bleaching event, caused by strong SST anomalies, coral health and recovery from the previous year's bleaching was significantly better on the narrow southern Cat Island shelf (70% of corals healthy) where the presence of cold water was observed, which was attributed to small-scale upwelling, than on the wide northern Eleuthera shelf (44% of corals healthy), where downwelling of hot bank waters was believed to have damaged corals. In South Africa, regular, short-term upwelling events in five summers reduced SST to well below bleaching level. (2) In the northern Red Sea (Safaga Bay) and in South Africa (Sodwana Bay), wide areas with either coral frameworks or non-framework communities exist. Calculations show that if the top 10 m (20 m) of the ocean became inhospitable to corals, still 50.4% (17.5%) of the coral area would remain intact in the Red Sea and 99% (40%) in South Africa. (3) Offshore bank and island reefs investigated in the Turks, Caicos, and Mouchoir Banks and Grand and Little Cayman showed high rates of mortality and coral diseases. The most remote sites (Mouchoir Bank) were not the healthiest. Refuge areas appear to exist in (1) and (2), but in (3) only if vigorous water-circulation is encountered.     

珊瑚礁工程地质研究的内容和方法

珊瑚礁工程地质研究的主要内容为珊瑚礁自然地质条件、珊瑚礁岩土物理力学性质和珊瑚礁混凝土料问题。除了通常的工程地质研究方法外, 着重介绍珊瑚礁工程地质研究的钻探、触探和地球物理勘测方法。     

On the variability of the flow along the Meso-American Barrier Reef system: a numerical model study of the influence of the Caribbean current and eddies

A high resolution (3–8 km grid), 3D numerical ocean model of the West Caribbean Sea (WCS) is used to investigate the variability and the forcing of flows near the Meso-American Barrier Reef System (MBRS) which runs along the coasts of Mexico, Belize, Guatemala and Honduras. Mesoscale variations in velocity and temperature along the reef were found in seasonal model simulations and in observations; these variations are associated with meandering of the Caribbean current (CC) and the propagation of Caribbean eddies. Diagnostic calculations and a simple assimilation technique are combined to infer the dynamically adjusted flow associated with particular eddies. The results demonstrate that when a cyclonic eddy (negative sea surface height anomaly (SSHA)) is found near the MBRS the CC shifts offshore, the cyclonic circulation in the Gulf of Honduras (GOH) intensifies, and a strong southward flow results along the reef. However, when an anticyclonic eddy (positive SSHA) is found near the reef, the CC moves onshore and the flow is predominantly westward across the reef. The model results help to explain how drifters are able to propagate in a direction opposite to the mean circulation when eddies cause a reversal of the coastal circulation. The effect of including the Meso-American Lagoon west of the Belize Reef in the model topography was also investigated, to show the importance of having accurate coastal topography in determining the variations of transports across the MBRS. The variations found in transports across the MBRS (on seasonal and mesoscale time scales) may have important consequences for biological activities along the reef such as spawning aggregations; better understanding the nature of these variations will help ongoing efforts in coral reef conservation and maintaining the health of the ecosystem in the region.     

The wreck of the MV Rena: spatio-temporal analysis of ship-derived contaminants in the sediments and fauna of Astrolabe Reef

ABSTRACT

The October 2011 sinking of the container ship MV Rena on Astrolabe Reef, New Zealand, provided a rare opportunity to examine the fate of shipwreck-derived contaminants on an offshore rocky reef and food chain. Analyses of trace metals, polycyclic aromatic hydrocarbons (PAHs) and organotins indicated significant but localised contamination of Astrolabe Reef but not of nearby Mōtītī Island. Three years after the grounding, PAH concentrations were greater in sediments at Astrolabe (up to 131?mg kg^?1) than at control locations, while organotins from the ship's antifouling hull paint were found exclusively in Astrolabe Reef sediments and biota. Over 80% of Astrolabe sediment samples contained tributyltin at concentrations above guideline sediment levels (>0.07?mg kg^?1). Tributyltin and its decomposition products were also recorded in sea urchins, gastropods, lobster and fishes at concentrations up to 0.2?mg kg^?1. Wreck and cargo-derived metals, particularly copper, tin and zinc, were present in some Astrolabe sediment samples above Australia and New Zealand Environment and Conservation Council guideline concentrations. However, there appeared to be only limited transmission of metals through the food chain. Copper, tin and zinc were recorded at greater concentrations in Astrolabe sea urchins and gastropods compared to control specimens, while metal concentrations in other biota were comparable across impact and control sites. Despite over 3 years having passed since the Rena grounding, the data series does not show any upward or downward trends in contaminant concentrations on Astrolabe Reef. Consequently, there is uncertainty about the long-term implications of the Rena grounding for the ecology of Astrolabe Reef.     

Comparison of long-, medium- and short-term variations of beach profiles with and without submerged geological control

Victoria Beach (Cadiz, Spain) comprises a rocky flat outcrop in its northern zone and a sand-rich southern zone. These natural features allowed for a 5-year monitoring period and subsequent analysis of two different profiles (one in each zone) based on differences in bottom contours. Topo-bathymetric data were analysed using empirical orthogonal functions (EOFs) to determine changes over the short-, medium- and long-term. Several morphologic phenomena were identified (generalised erosion, seasonal or summer–winter tilting of the profile around different hinge points, berm development and its posterior destruction, etc.) in terms of their importance in explaining the variability of the collected data for both profiles. It is worth mentioning that both profiles undergo parallel regression in the medium-term. Thus, the 1st eigenfunction enabled us to identify the true regression of the beach shoreline, independent of seasonal or summer–winter slope changes. Reconstruction of profiles using EOF components demonstrated that though accretion periods in the medium-term were similar for both types of profiles, the accretion speed was much faster in the sand-rich profile than in the reef-protected profile (1.01 m³/day versus 0.33 m³/day). Moreover, the seasonal erosion rate and the subsequent shoreline retreat for the sand-rich profile were much larger than for the reef-protected profile (121 m³/year versus 29 m³/year). Analysis in the short-term (changes induced by a single day's storm) showed an instantaneous tilting of the profile, with the mobilised sand volume being much greater for the sand-rich than for the reef-protected profile (68 m³/m versus 12 m³/m).     

Importance of wave-induced bed liquefaction in the fine sediment budget of Cleveland Bay,Great Barrier Reef

Data from a three-year long field study of fine sediment dynamics in Cleveland Bay show that wave-induced liquefaction of the fine sediment bed on the seafloor in shallow water was the main process causing bed erosion under small waves during tradewinds, and that shear-induced erosion prevailed during cyclonic conditions. These data were used to verify a model of fine sediment dynamics that calculates sediment resuspension by both excess shear stress and wave-induced liquefaction of the bed. For present land-use conditions, the amount of riverine sediments settling on the bay may exceed by 50–75% the amount of sediment exported from the bay. Sediment is thus accumulating in the bay on an annual basis, which in turn may degrade the fringing coral reefs. For those years when a tropical cyclone impacted the bay there may be a net sediment outflow from the bay. During the dry, tradewind season, fine sediment was progressively winnowed out of the shallow, reefal waters.